GOID TERM ONTOLOGY pValue Genes GO:0015711 organic anion transport BP 0.000470402101293642 AT5G58620//AT5G53110//ATGLR2.5//ALA1//ATGSL05//AT2G33260//AT1G07030//AT3G21390//ANT1//CAT9//YSL7 GO:0071705 nitrogen compound transport BP 0.000723627435305354 PUT1//AT5G58620//AT5G53110//AT5G18880//ATGLR2.5//AT3G47040//ATGSL05//AtWRKY47//AT2G33260//AT1G07030//AT3G21390//AT3G25260//ALDH1A//ANT1//AT1G71910//CAT9//YSL8//AT1G59740//YSL7 GO:0006820 anion transport BP 0.000742151180530864 AT5G60730//AT5G58620//AT5G53110//ATGLR2.5//ALA1//AT3G47040//ATGSL05//AtWRKY47//AT2G33260//AT1G07030//AT3G21390//ALDH1A//ANT1//CAT9//AT1G14040//YSL7 GO:0045089 positive regulation of innate immune res... BP 0.000754505144299943 BOP1//ATGSL05//LOL1//AtSDF2 GO:0002684 positive regulation of immune system pro... BP 0.000892465788032027 BOP1//ATGSL05//LOL1//AtSDF2 GO:0050778 positive regulation of immune response BP 0.000892465788032027 BOP1//ATGSL05//LOL1//AtSDF2 GO:0009065 glutamine family amino acid catabolic pr... BP 0.000914104008623674 AT5G61540//ADC2//AT1G64800 GO:0006865 amino acid transport BP 0.00117786054744313 AT5G58620//AT5G53110//ATGLR2.5//ATGSL05//AT2G33260//AT1G07030//ANT1//CAT9//YSL7 GO:0031349 positive regulation of defense response BP 0.00141177346321158 BOP1//ATGSL05//LOL1//AtSDF2 GO:0071900 regulation of protein serine/threonine k... BP 0.00185651650732943 CYCA1//CYCA3;1//ATMAPK3//CYCD6;1 GO:0048584 positive regulation of response to stimu... BP 0.00218962342511362 BOP1//ATMAPK3//ATGSL05//LOL1//AtSDF2 GO:0015849 organic acid transport BP 0.00247722723769407 AT5G58620//AT5G53110//ATGLR2.5//ATGSL05//AT2G33260//AT1G07030//ANT1//CAT9//YSL7 GO:0046942 carboxylic acid transport BP 0.00247722723769407 AT5G58620//AT5G53110//ATGLR2.5//ATGSL05//AT2G33260//AT1G07030//ANT1//CAT9//YSL7 GO:0043549 regulation of kinase activity BP 0.0026925130948262 CYCA1//CYCA3;1//ATMAPK3//CYCD6;1 GO:0045859 regulation of protein kinase activity BP 0.0026925130948262 CYCA1//CYCA3;1//ATMAPK3//CYCD6;1 GO:0051338 regulation of transferase activity BP 0.00302033385378011 CYCA1//CYCA3;1//ATMAPK3//CYCD6;1 GO:0001932 regulation of protein phosphorylation BP 0.00375571460560396 CYCA1//CYCA3;1//ATMAPK3//CYCD6;1 GO:0042325 regulation of phosphorylation BP 0.00375571460560396 CYCA1//CYCA3;1//ATMAPK3//CYCD6;1 GO:0000079 regulation of cyclin-dependent protein s... BP 0.00643390400880039 CYCA1//CYCA3;1//CYCD6;1 GO:0044703 multi-organism reproductive process BP 0.00825531090561491 LON1//AtRPP30//AT5G35910//CPK17//ATGRP20//AT3G48210//ARK3//DES-1-LIKE//ANX1//ASE1//ATCAL5//ATMLO5 GO:0006857 oligopeptide transport BP 0.0116878921913139 AtWRKY47//AT3G25260//YSL8//AT1G59740//YSL7 GO:0015833 peptide transport BP 0.0116878921913139 AtWRKY47//AT3G25260//YSL8//AT1G59740//YSL7 GO:0008216 spermidine metabolic process BP 0.0138224801055758 AtRPP30//ADC2 GO:0009553 embryo sac development BP 0.0141418148361226 CKI1//LON1//AtRPP30//AT5G35910//AT3G48210//ASE1 GO:0042886 amide transport BP 0.0151981683441869 AtWRKY47//AT3G25260//YSL8//AT1G59740//YSL7 GO:0009064 glutamine family amino acid metabolic pr... BP 0.0190107528572231 AT5G61540//ADC2//AT1G64800 GO:0000724 double-strand break repair via homologou... BP 0.020698846625747 ATXRCC3//CYCA3;1//AT3G48210 GO:0000725 recombinational repair BP 0.020698846625747 ATXRCC3//CYCA3;1//AT3G48210 GO:0009560 embryo sac egg cell differentiation BP 0.0219556719706194 LON1//AT5G35910//AT3G48210//ASE1 GO:0007292 female gamete generation BP 0.0245340998305897 LON1//AT5G35910//AT3G48210//ASE1 GO:0000003 reproduction BP 0.0275664766274901 CYCA1//LON1//ATXRCC3//AT5G35910//ATXR6//ATGRP20//AT3G48210//ATGSL05//ATIPT6//AT1G72100//GAI//ASE1 GO:0002218 activation of innate immune response BP 0.0342889229272638 BOP1//ATGSL05 GO:0002253 activation of immune response BP 0.0342889229272638 BOP1//ATGSL05 GO:0051704 multi-organism process BP 0.0361697378149017 LON1//AtRPP30//AT5G35910//CPK17//ATGRP20//AT5G05300//BOP1//ATCML9//AT3G48210//ATMAPK3//AT3G43250//ADC2//ARK3//DES-1-LIKE//ATGSL05//LOL1//ALDH1A//ANT1//ANX1//ADR2//AT1G52600//AT1G59740//ASE1//AtSDF2//ATGRP-3//ATCAL5//ATMLO5 GO:0010218 response to far red light BP 0.0394664427619963 ATHB-2//AtGRF7//GAI GO:0006312 mitotic recombination BP 0.0426836757836386 ATXRCC3//AT3G48210 GO:0097164 ammonium ion metabolic process BP 0.0517552515100399 AtRPP30//ADC2 GO:0030163 protein catabolic process BP 0.0536031104998798 CYCA1//LON1//AT5G61540//UBP21//AT4G26390//UPL5//AT4G04690//AT2G02050//ATCAL5 GO:0022412 cellular process involved in reproductio... BP 0.0536778990732177 LON1//AT5G35910//AT3G48210//ASE1 GO:1901606 alpha-amino acid catabolic process BP 0.0557985424528105 AT5G61540//ADC2//AT1G64800//ATGRP-3 GO:0009309 amine biosynthetic process BP 0.0565259196680652 AtRPP30//ADC2 GO:0042401 cellular biogenic amine biosynthetic pro... BP 0.0565259196680652 AtRPP30//ADC2 GO:0009063 cellular amino acid catabolic process BP 0.0579638957386038 AT5G61540//ADC2//AT1G64800//ATGRP-3 GO:0051510 regulation of unidimensional cell growth BP 0.0583844737202509 CYCA1//CPK17//ANX1 GO:0048609 multicellular organismal reproductive pr... BP 0.0593129193378175 LON1//AT5G35910//ATXR6//AT3G48210//AT1G72100//GAI//ASE1 GO:0010224 response to UV-B BP 0.0613801067343284 EFO2//ATMAPK3//AT2G25530 GO:0022604 regulation of cell morphogenesis BP 0.0613801067343284 CYCA1//CPK17//ANX1 GO:0019953 sexual reproduction BP 0.0614350600200914 LON1//AT5G35910//ATGRP20//AT3G48210//ASE1 GO:0009225 nucleotide-sugar metabolic process BP 0.0614435174260198 DRT101//GAE5 GO:0009269 response to desiccation BP 0.0614435174260198 ATCML9//ATGRP-3 GO:0009561 megagametogenesis BP 0.0624279897466576 LON1//AT5G35910//AT3G48210//ASE1 GO:0009856 pollination BP 0.0648967670599935 AtRPP30//CPK17//ARK3//DES-1-LIKE//ANX1//ATCAL5//ATMLO5 GO:0044706 multi-multicellular organism process BP 0.0648967670599935 AtRPP30//CPK17//ARK3//DES-1-LIKE//ANX1//ATCAL5//ATMLO5 GO:0010087 phloem or xylem histogenesis BP 0.067581907392691 CKI1//TET5//DOT1 GO:0007276 gamete generation BP 0.0694542926591288 LON1//AT5G35910//AT3G48210//ASE1 GO:0008033 tRNA processing BP 0.0716917915181743 AtRPP30//ATIPT6 GO:0051645 Golgi localization BP 0.0716917915181743 ATPLC4//ATXIG GO:0051646 mitochondrion localization BP 0.0716917915181743 ATPLC4//ATXIG GO:0060151 peroxisome localization BP 0.0716917915181743 ATPLC4//ATXIG GO:0007568 aging BP 0.0718834212089397 TET5//UPL5//ATGSL05//TET2 GO:0009414 response to water deprivation BP 0.0723119838919113 ATCML9//ADC2//GAE5//RECQI1//ATGRP-3//ATHB-7//DREB19 GO:0015748 organophosphate ester transport BP 0.0740574903600447 ALA1//ATGSL05//AT3G21390 GO:0042023 DNA endoreduplication BP 0.0740574903600447 CYCA1//ATXR6//CYCD6;1 GO:0051726 regulation of cell cycle BP 0.0750617570682194 CYCA1//CYCA3;1//ATXR6//AT4G26660//CYCD6;1 GO:0001558 regulation of cell growth BP 0.0773952337225591 CYCA1//CPK17//ANX1 GO:0044786 cell cycle DNA replication BP 0.0773952337225591 CYCA1//ATXR6//CYCD6;1 GO:0009415 response to water BP 0.078593094194116 ATCML9//ADC2//GAE5//RECQI1//ATGRP-3//ATHB-7//DREB19 GO:0006302 double-strand break repair BP 0.0807981066573907 ATXRCC3//CYCA3;1//AT3G48210 GO:0009556 microsporogenesis BP 0.0824466727348812 CYCA1//ATGSL05 GO:0032504 multicellular organism reproduction BP 0.0835071703156579 LON1//AT5G35910//ATXR6//AT3G48210//AT1G72100//GAI//ASE1 GO:0006595 polyamine metabolic process BP 0.0879982603012284 AtRPP30//ADC2 GO:0030148 sphingolipid biosynthetic process BP 0.0879982603012284 PUT1//DES-1-LIKE GO:0006811 ion transport BP 0.088331224868639 AT5G60730//AT5G58620//AT5G53110//ATGLR2.5//ALA1//ATCML9//AT3G47040//ATGSL05//AtWRKY47//AT2G33260//AT1G07030//AT3G21390//ALDH1A//ANT1//CAT9//AT1G14040//YSL7//AT2G37910 GO:0006310 DNA recombination BP 0.0901973181029698 ATXRCC3//CYCA3;1//AT3G48210//ATIPT6//RECQI1 GO:0034599 cellular response to oxidative stress BP 0.0936578789719526 LON1//LOL1 GO:0042631 cellular response to water deprivation BP 0.0936578789719526 GAE5//RECQI1 GO:0048236 plant-type spore development BP 0.0936578789719526 CYCA1//ATGSL05 GO:0071462 cellular response to water stimulus BP 0.0936578789719526 GAE5//RECQI1 GO:0006259 DNA metabolic process BP 0.10260585865854 CYCA1//ATXRCC3//CYCA3;1//ATXR6//DRT101//AT3G48210//AT4G26660//CYCD6;1//ATIPT6//RECQI1 GO:0031347 regulation of defense response BP 0.104961092694744 ALA1//BOP1//ATCML9//ATMAPK3//ADC2//ATGSL05//LOL1//AtSDF2//ATGRP-3 GO:0019941 modification-dependent protein catabolic... BP 0.104961518034522 CYCA1//LON1//UBP21//UPL5//AT4G04690//AT2G02050 GO:0043632 modification-dependent macromolecule cat... BP 0.104961518034522 CYCA1//LON1//UBP21//UPL5//AT4G04690//AT2G02050 GO:0000086 G2/M transition of mitotic cell cycle BP 0.105278092418325 CYCA3;1//ATXR6 GO:0010389 regulation of G2/M transition of mitotic... BP 0.105278092418325 CYCA3;1//ATXR6 GO:0044839 cell cycle G2/M phase transition BP 0.105278092418325 CYCA3;1//ATXR6 GO:1902749 regulation of cell cycle G2/M phase tran... BP 0.105278092418325 CYCA3;1//ATXR6 GO:0006888 ER to Golgi vesicle-mediated transport BP 0.110222296572207 AT5G58620//ATGSL05//AT2G21630 GO:0031323 regulation of cellular metabolic process BP 0.110340218073851 CKI1//ATHB-2//CYCA1//AT5G58620//ATXRCC3//AtGRF7//CYCA3;1//ATXR6//HDG9//AT5G09780//BOP1//AT3G49930//AT3G48210//ATMAPK3//AT4G26660//CYCD6;1//AtWRKY47//ATIPT6//AT3G12130//LOL1//ANAC015//ADOF2//GAI//AT1G64800//ANAC009//AT1G09060//PLT2//ATHB-7//DREB19 GO:0048229 gametophyte development BP 0.113594870801393 CKI1//CYCA1//LON1//AtRPP30//AT5G35910//AT3G48210//ATGSL05//ASE1 GO:0006468 protein phosphorylation BP 0.117593117356325 CKI1//CYCA1//CYCA3;1//AT5G41180//AT5G18610//CPK17//AT3G55550//ATMAPK3//ARK3//CRK34//CYCD6;1//ANX1//AT1G01450//AT1G72540//AT2G46850 GO:1903046 meiotic cell cycle process BP 0.119461677843322 CYCA1//ATXRCC3//AT3G48210//ATIPT6 GO:0080134 regulation of response to stress BP 0.119808355540942 ALA1//BOP1//ATCML9//ATMAPK3//ADC2//ATGSL05//LOL1//AtSDF2//ATGRP-3 GO:0019220 regulation of phosphate metabolic proces... BP 0.122605595119251 CYCA1//CYCA3;1//ATMAPK3//CYCD6;1 GO:0051174 regulation of phosphorus metabolic proce... BP 0.122605595119251 CYCA1//CYCA3;1//ATMAPK3//CYCD6;1 GO:0051302 regulation of cell division BP 0.123378690269893 ANAC009//PLT2 GO:0050832 defense response to fungus BP 0.12499929685869 AT5G05300//ATMAPK3//AT3G43250//ATGSL05//ADR2//AtSDF2 GO:0033554 cellular response to stress BP 0.126497484009821 LON1//ATXRCC3//CYCA3;1//DRT101//ALA1//AT3G48210//AT3G47040//ATMAPK3//ADC2//GAE5//ATGSL05//LOL1//ALDH1A//RECQI1//AT1G52600//AT1G14040//AtSDF2//DREB19 GO:0071702 organic substance transport BP 0.129439580784266 AT4G15470//PUT1//AT5G58620//AT5G53110//AT5G18880//ATGLR2.5//ALA1//ATMAPK3//ADC2//ATGSL05//AtWRKY47//AT2G33260//AT1G07030//AT3G21390//AT3G25260//AT3G17340//ANT1//AT1G71910//CAT9//YSL8//AT1G59740//YSL7//AT2G21630 GO:1901987 regulation of cell cycle phase transitio... BP 0.129570212230613 CYCA3;1//ATXR6 GO:1901990 regulation of mitotic cell cycle phase t... BP 0.129570212230613 CYCA3;1//ATXR6