GOID TERM ONTOLOGY pValue Genes GO:2000280 regulation of root development BP 0.00800398050313702 ARR2//XLG2//SOL1 GO:0042221 response to chemical BP 0.0151472948011176 ILL6//ARR2//AIP2//CP1//ATMYB44//AT5G49130//AT5G22890//RVE1//AT5G16500//AIL6//AT3G47040//AT4G37710//XLG2//HAE//AT4G27250//AT4G22530//CRK25//AT4G03620//AT3G10930//ATMYB30//ATGRP-5//AT3G26910//ATGSTU8//PTF1//AT3G03620//AT1G69080//ATEXT3//ABCB14//ATLOX4//ATSAGT1//AT2G43670//AtATL15//HOS10//AT1G56150//AT1G52560//AT1G34750//ATDTX1//LEA//AFR//AT2G37030//AT2G21220//ATMYB7//ALD1//ATGSTU7//ABCC4//ATHSFA2//ATPP2-A3//JAZ7//AKR4C9//BIK1 GO:0001101 response to acid chemical BP 0.0175020733262562 ILL6//AIP2//CP1//ATMYB44//AT5G22890//RVE1//AT3G47040//XLG2//AT4G27250//CRK25//ATMYB30//ATGRP-5//PTF1//ATLOX4//ATSAGT1//AtATL15//HOS10//LEA//ATMYB7//ALD1//ATGSTU7//ABCC4//ATPP2-A3//JAZ7//AKR4C9//BIK1 GO:0009733 response to auxin BP 0.0176695344111451 ATMYB44//RVE1//AIL6//XLG2//ATMYB30//ABCB14//AT1G56150//AT2G37030//AT2G21220//JAZ7 GO:0006855 drug transmembrane transport BP 0.01835977129034 AT5G49130//AT3G03620//ATDTX1//ABCC4 GO:0015893 drug transport BP 0.0201386550226689 AT5G49130//AT3G03620//ATDTX1//ABCC4 GO:0042493 response to drug BP 0.0201386550226689 AT5G49130//AT3G03620//ATDTX1//ABCC4 GO:0008299 isoprenoid biosynthetic process BP 0.0207702641906918 BARS1//CP1//AT4G27250//CYP82G1//GGPS6//LEA//GLYI8//ACPT GO:0010075 regulation of meristem growth BP 0.0220201733911649 ARR2//AT1G32190//AIL6//SOL1 GO:0035266 meristem growth BP 0.0260961677298069 ARR2//AT1G32190//AIL6//SOL1 GO:0009734 auxin-activated signaling pathway BP 0.0263758730753323 RVE1//AIL6//ABCB14 GO:0009751 response to salicylic acid BP 0.0264527720260706 ATMYB44//RVE1//XLG2//ATMYB30//ATGRP-5//HOS10//ATMYB7//ALD1//ATGSTU7//BIK1 GO:0048443 stamen development BP 0.0287961670461326 AT5G51950//AGL1//HAE//ENDO3//CYP90D1//ATLOX4 GO:0048466 androecium development BP 0.0287961670461326 AT5G51950//AGL1//HAE//ENDO3//CYP90D1//ATLOX4 GO:0006633 fatty acid biosynthetic process BP 0.0305962283627772 KCS21//ATMYB123//ATMYB30//ATSMO1 GO:0010082 regulation of root meristem growth BP 0.0311302759928376 ARR2//SOL1 GO:0042991 transcription factor import into nucleus BP 0.0328682345097446 CRF3//AT3G54520//AT2G23830 GO:0071365 cellular response to auxin stimulus BP 0.0363976148485908 RVE1//AIL6//ABCB14 GO:0006720 isoprenoid metabolic process BP 0.0368951026547168 BARS1//CP1//AT4G27250//CYP82G1//GGPS6//LEA//GLYI8//ACPT GO:0010449 root meristem growth BP 0.0373465953828467 ARR2//SOL1 GO:0010033 response to organic substance BP 0.0385708754266718 ILL6//ARR2//AIP2//CP1//ATMYB44//AT5G22890//RVE1//AIL6//XLG2//HAE//AT4G27250//AT4G22530//AT4G03620//AT3G10930//ATMYB30//ATGRP-5//AT3G26910//ATGSTU8//PTF1//AT1G69080//ATEXT3//ABCB14//ATLOX4//AT2G43670//AtATL15//HOS10//AT1G56150//AT1G34750//AFR//AT2G37030//AT2G21220//ATMYB7//ALD1//ATGSTU7//ATHSFA2//JAZ7//BIK1 GO:0006913 nucleocytoplasmic transport BP 0.0412656553220324 AtRAN4//CRF3//AT3G54520//RPSAb//AT2G23830 GO:0051169 nuclear transport BP 0.0412656553220324 AtRAN4//CRF3//AT3G54520//RPSAb//AT2G23830 GO:0009753 response to jasmonic acid BP 0.0439739990957774 ILL6//ATMYB44//RVE1//XLG2//ATMYB30//PTF1//ATLOX4//ATMYB7//JAZ7 GO:0009900 dehiscence BP 0.0439916187993596 AGL1//ATLOX4 GO:0010286 heat acclimation BP 0.0440136820912942 AT1G52560//AT1G11270//ATHSFA2 GO:0008610 lipid biosynthetic process BP 0.0488548059264094 BARS1//CP1//KCS21//ATMYB123//AT4G27250//CYP90D1//ATMYB30//CYP82G1//ATSMO1//GGPS6//AT1G65000//LEA//GLYI8//ACPT GO:0002684 positive regulation of immune system pro... BP 0.0510361822593704 GOX3//BIK1 GO:0045089 positive regulation of innate immune res... BP 0.0510361822593704 GOX3//BIK1 GO:0050778 positive regulation of immune response BP 0.0510361822593704 GOX3//BIK1 GO:0052542 defense response by callose deposition BP 0.0523565169227334 XLG2//AT3G26910//ATLOX4 GO:0009966 regulation of signal transduction BP 0.0529189687308734 AIP2//ATMYB44//AT4G35380//ABCB14 GO:0023051 regulation of signaling BP 0.0529189687308734 AIP2//ATMYB44//AT4G35380//ABCB14 GO:0009739 response to gibberellin BP 0.056108516568629 CP1//ATMYB44//RVE1//AT4G27250//ATMYB30 GO:0009694 jasmonic acid metabolic process BP 0.0595803038490627 ILL6//PTF1//ATLOX4//JAZ7 GO:0010646 regulation of cell communication BP 0.0595803038490627 AIP2//ATMYB44//AT4G35380//ABCB14 GO:0051704 multi-organism process BP 0.0606179113019849 ILL6//AT5G28470//AT5G14890//ATMYB44//ARI14//ASF1B//AT5G16500//AT3G62640//DAF1//XLG2//HAE//AT4G27660//ENDO3//GOX3//AT4G03620//AT3G19020//ATMYB30//AT1G69080//ATLOX4//CMT1//PCR11//AT1G34750//ALD1//ABCC4//ATPP2-A3//JAZ7//ABCG1//ATMES1//AT2G37670//BIK1 GO:0006606 protein import into nucleus BP 0.0630706715308964 CRF3//AT3G54520//RPSAb//AT2G23830 GO:0044744 protein targeting to nucleus BP 0.0630706715308964 CRF3//AT3G54520//RPSAb//AT2G23830 GO:0051170 nuclear import BP 0.0630706715308964 CRF3//AT3G54520//RPSAb//AT2G23830 GO:1902593 single-organism nuclear import BP 0.0630706715308964 CRF3//AT3G54520//RPSAb//AT2G23830 GO:0006071 glycerol metabolic process BP 0.066213719490317 GDPDL5//AT1G28640 GO:0019400 alditol metabolic process BP 0.066213719490317 GDPDL5//AT1G28640 GO:0031349 positive regulation of defense response BP 0.066213719490317 GOX3//BIK1 GO:0034504 protein localization to nucleus BP 0.0666664351203087 CRF3//AT3G54520//RPSAb//AT2G23830 GO:0048509 regulation of meristem development BP 0.0666664351203087 ARR2//AT1G32190//AIL6//SOL1 GO:0009723 response to ethylene BP 0.0698611580194001 ARR2//ATMYB44//RVE1//XLG2//ATMYB30//ATLOX4//ATMYB7//JAZ7 GO:0009755 hormone-mediated signaling pathway BP 0.0726459965799457 ARR2//AIP2//CP1//ATMYB44//RVE1//AIL6//XLG2//AT4G27250//ABCB14//ATLOX4//AT2G43670//ATMYB7//JAZ7 GO:0046173 polyol biosynthetic process BP 0.0742946638242924 AT1G28640//AFR GO:0046482 para-aminobenzoic acid metabolic process BP 0.0742946638242924 AT4G22530//ATSAGT1 GO:0044283 small molecule biosynthetic process BP 0.0744829449310674 ILL6//CP1//KCS21//ATMYB123//XLG2//AT4G27250//CYP90D1//ATMYB30//ATLOX4//ATSMO1//GGPS6//AT1G28640//AFR//ALD1//JAZ7//ACPT GO:0006629 lipid metabolic process BP 0.0745772542784355 BARS1//CP1//KCS21//ATMYB123//PLA//AT4G27250//CYP90D1//GDPDL5//ATMYB30//CYP82G1//ATGSTU8//ATLOX4//ATSMO1//GGPS6//AT1G28640//AT1G28650//AT1G65000//LEA//AT2G04570//GLYI8//ACPT GO:0009719 response to endogenous stimulus BP 0.0768561383636006 ILL6//ARR2//AIP2//CP1//ATMYB44//AT5G22890//RVE1//AIL6//XLG2//AT4G27250//AT4G22530//AT3G10930//ATMYB30//ATGRP-5//PTF1//ATEXT3//ABCB14//ATLOX4//AT2G43670//AT1G56150//AT2G37030//AT2G21220//ATMYB7//ATHSFA2//JAZ7//BIK1 GO:0048441 petal development BP 0.0800979980772017 AT5G51950//AT5G47170//AGL1//ENDO3//CYP90D1 GO:0048465 corolla development BP 0.0800979980772017 AT5G51950//AT5G47170//AGL1//ENDO3//CYP90D1 GO:0007623 circadian rhythm BP 0.0814875308592149 ARR2//RVE1//AT2G37000 GO:0048511 rhythmic process BP 0.0814875308592149 ARR2//RVE1//AT2G37000 GO:0000041 transition metal ion transport BP 0.0831302959345719 AT5G22890//AT3G47040//AT3G47210//AT4G35380//GOX3//CRK25//ATDTX1//ATPP2-A3 GO:0000038 very long-chain fatty acid metabolic pro... BP 0.0913195644025383 KCS21//ATMYB30 GO:0071456 cellular response to hypoxia BP 0.0913195644025383 AT4G37710//ATHSFA2 GO:0009873 ethylene-activated signaling pathway BP 0.094696081523793 ARR2//ATLOX4//ATMYB7//JAZ7 GO:0009617 response to bacterium BP 0.0977915441512646 ATMYB44//HAE//GOX3//ATMYB30//ATLOX4//AT1G34750//ALD1//ATPP2-A3 GO:0032870 cellular response to hormone stimulus BP 0.0979009460469066 ARR2//AIP2//CP1//ATMYB44//RVE1//AIL6//XLG2//AT4G27250//ABCB14//ATLOX4//AT2G43670//ATMYB7//JAZ7 GO:0048583 regulation of response to stimulus BP 0.0985967756658652 ILL6//AIP2//ATMYB44//AT4G35380//XLG2//GOX3//PTF1//ABCB14//AT1G34750//BIK1 GO:0006733 oxidoreduction coenzyme metabolic proces... BP 0.100218290780509 PGL1//GGPS6 GO:0036294 cellular response to decreased oxygen le... BP 0.100218290780509 AT4G37710//ATHSFA2 GO:0071453 cellular response to oxygen levels BP 0.100218290780509 AT4G37710//ATHSFA2 GO:0007165 signal transduction BP 0.100771950747471 ARR2//AIP2//CP1//ATMYB44//AtRAN4//AT5G43870//RVE1//AIL6//AT4G35380//XLG2//HAE//AT4G27250//AT4G22530//GOX3//AT4G09420//AT3G27473//AT3G26910//ABCB14//ATLOX4//AT2G43670//CBL8//AT2G17050//AFR//ATMYB7//ALD1//JAZ7//AT2G37670//BIK1 GO:0071495 cellular response to endogenous stimulus BP 0.101630496377946 ARR2//AIP2//CP1//ATMYB44//RVE1//AIL6//XLG2//AT4G27250//ABCB14//ATLOX4//AT2G43670//ATMYB7//JAZ7 GO:0044281 small molecule metabolic process BP 0.103189683022795 ILL6//CP1//CRF3//AT5G51950//KCS21//ATMYB123//XLG2//AT4G27250//AT4G22530//AT4G00560//PGL1//CYP90D1//GDPDL5//ATMYB30//ATGSTU8//PTF1//ATLOX4//ATSAGT1//ATSMO1//GGPS6//AT1G28640//AFR//ALD1//JAZ7//ATMES1//ACPT GO:0019751 polyol metabolic process BP 0.104010080695697 GDPDL5//AT1G28640//AFR GO:0035966 response to topologically incorrect prot... BP 0.105552826117432 XLG2//AT4G22530//AT3G26910//ATGSTU8//ATEXT3//ATHSFA2 GO:1901700 response to oxygen-containing compound BP 0.107588973949696 ILL6//AIP2//CP1//ATMYB44//AT5G22890//RVE1//AT3G47040//XLG2//AT4G27250//AT4G22530//CRK25//AT3G10930//ATMYB30//ATGRP-5//PTF1//ATLOX4//ATSAGT1//AtATL15//HOS10//AT1G52560//LEA//AFR//ATMYB7//ALD1//ATGSTU7//ABCC4//ATHSFA2//ATPP2-A3//JAZ7//AKR4C9//BIK1 GO:0071310 cellular response to organic substance BP 0.108849076247066 ARR2//AIP2//CP1//ATMYB44//RVE1//AIL6//XLG2//AT4G27250//AT4G22530//AT3G26910//ABCB14//ATLOX4//AT2G43670//ATMYB7//ALD1//ATHSFA2//JAZ7//BIK1 GO:0010876 lipid localization BP 0.10887770155193 AT5G56100//AT5G13900//AT4G22490//AT3G07450//AT1G18280//GLYI8 GO:0048235 pollen sperm cell differentiation BP 0.109346118596913 DAF1//PCR11 GO:0009695 jasmonic acid biosynthetic process BP 0.109987763818297 ILL6//ATLOX4//JAZ7 GO:0051716 cellular response to stimulus BP 0.113818012073905 ARR2//AIP2//CP1//AT5G26680//ATMYB44//AtRAN4//AT5G43870//ASF1B//AT5G22890//RVE1//AIL6//AT3G47040//AT3G42860//AT4G38780//AT4G37710//AT4G35380//XLG2//HAE//AT4G27250//AT4G22530//GOX3//AT4G09420//CRK25//ATMYB30//AT3G27473//AT3G26910//ABCB14//ATLOX4//AT2G43670//CBL8//AT2G17050//AFR//ATMYB7//ALD1//ABCC4//ATHSFA2//ATPP2-A3//JAZ7//AT2G37670//BIK1 GO:0009611 response to wounding BP 0.115687469478794 ILL6//XLG2//AT3G10930//ATLOX4//ABCC4//JAZ7 GO:0048440 carpel development BP 0.115687469478794 AT5G51950//AT5G47170//AGL13//AGL1//ENDO3//ABCB14 GO:0034440 lipid oxidation BP 0.116094805007183 ATGSTU8//ATLOX4//ATSMO1 GO:0044255 cellular lipid metabolic process BP 0.117611797301593 BARS1//CP1//KCS21//ATMYB123//AT4G27250//ATMYB30//CYP82G1//ATGSTU8//ATLOX4//ATSMO1//GGPS6//AT1G65000//LEA//GLYI8//ACPT GO:0006631 fatty acid metabolic process BP 0.119171344716479 KCS21//ATMYB123//AT4G27250//ATMYB30//ATGSTU8//ATSMO1 GO:0032787 monocarboxylic acid metabolic process BP 0.119705022257434 ILL6//KCS21//ATMYB123//XLG2//AT4G27250//AT4G22530//ATMYB30//ATGSTU8//PTF1//ATLOX4//ATSAGT1//ATSMO1//JAZ7//ATMES1 GO:0033037 polysaccharide localization BP 0.122326373209915 XLG2//AT3G26910//ATLOX4 GO:0052545 callose localization BP 0.122326373209915 XLG2//AT3G26910//ATLOX4 GO:0048467 gynoecium development BP 0.126294342502711 AT5G51950//AT5G47170//AGL13//AGL1//ENDO3//ABCB14 GO:1901615 organic hydroxy compound metabolic proce... BP 0.126505058174429 AT5G51950//ATMYB123//XLG2//CYP90D1//GDPDL5//ATSAGT1//ATSMO1//AT1G28640//AFR//ATMES1//ACPT GO:0071369 cellular response to ethylene stimulus BP 0.127374713924446 ARR2//ATLOX4//ATMYB7//JAZ7 GO:0009725 response to hormone BP 0.128674277111315 ILL6//ARR2//AIP2//CP1//ATMYB44//RVE1//AIL6//XLG2//AT4G27250//ATMYB30//ATGRP-5//PTF1//ATEXT3//ABCB14//ATLOX4//AT2G43670//AT1G56150//AT2G37030//AT2G21220//ATMYB7//JAZ7 GO:0023052 signaling BP 0.129205163107214 ARR2//AIP2//CP1//ATMYB44//AtRAN4//AT5G43870//RVE1//AIL6//AT4G35380//XLG2//HAE//AT4G27250//AT4G22530//GOX3//AT4G09420//AT3G27473//AT3G26910//ABCB14//ATLOX4//AT2G43670//CBL8//AT2G17050//AFR//ATMYB7//ALD1//JAZ7//AT2G37670//BIK1 GO:0044700 single organism signaling BP 0.129205163107214 ARR2//AIP2//CP1//ATMYB44//AtRAN4//AT5G43870//RVE1//AIL6//AT4G35380//XLG2//HAE//AT4G27250//AT4G22530//GOX3//AT4G09420//AT3G27473//AT3G26910//ABCB14//ATLOX4//AT2G43670//CBL8//AT2G17050//AFR//ATMYB7//ALD1//JAZ7//AT2G37670//BIK1 GO:0033036 macromolecule localization BP 0.13213282963675 AT5G56100//AtRAN4//CRF3//AT5G13900//GDI//AT3G54520//XLG2//AT4G22490//AT3G26910//RPSAb//AT3G07450//ATLOX4//AT1G18280//GLYI8//AT2G23830//BIK1 GO:0048868 pollen tube development BP 0.132312010934903 AT5G28470//AT5G14890//AT5G16500//AT3G62640//DAF1//ENDO3//AT4G03620//AT3G19020//AT2G37670 GO:0050896 response to stimulus BP 0.133398387928331 ILL6//ARR2//AT1G58410//AIP2//CP1//AT5G26680//ATMYB44//AtRAN4//KCS21//AT5G49130//AT5G43870//ASF1B//ATMYB123//AT5G22890//RVE1//AT5G16500//AIL6//AGL13//AT3G47040//AT3G42860//AT4G38780//AT4G37710//AT4G35380//XLG2//HAE//AT4G27250//AT4G22530//GOX3//AT4G09420//CRK25//AT4G03620//AT3G10930//ATMYB30//ATGRP-5//AT3G27473//AT3G26910//ATGSTU8//PTF1//AT3G03620//AT1G69080//AT1G15890//ATEXT3//ABCB14//ATLOX4//ATSAGT1//AT2G43670//AtATL15//CBL8//HOS10//AT1G56150//AT1G52560//AT1G34750//AT1G11270//ATDTX1//AT2G17050//LEA//AFR//AT2G37030//AT2G21220//GLYI8//ATMYB7//ALD1//ATGSTU7//ABCC4//ATHSFA2//ATPP2-A3//JAZ7//ABCG1//ATMES1//AT2G37670//AKR4C9//BGLU28//BIK1 GO:0070887 cellular response to chemical stimulus BP 0.134523634981346 ARR2//AIP2//CP1//ATMYB44//RVE1//AIL6//AT4G37710//XLG2//AT4G27250//AT4G22530//AT3G26910//ABCB14//ATLOX4//AT2G43670//ATMYB7//ALD1//ATHSFA2//JAZ7//BIK1 GO:0010167 response to nitrate BP 0.137358020353045 AT5G22890//AT3G47040//CRK25//ATSAGT1//AtATL15//ATPP2-A3 GO:0016114 terpenoid biosynthetic process BP 0.146077578675742 BARS1//CP1//AT4G27250//LEA//GLYI8 GO:0000724 double-strand break repair via homologou... BP 0.147761031302314 ASF1B//AT3G42860 GO:0000725 recombinational repair BP 0.147761031302314 ASF1B//AT3G42860