GOID	TERM	ONTOLOGY	pValue	Genes
GO:0006275	regulation of DNA replication	BP	0.000596801395860275	AtTOP3alpha//ATMAP65-3//AtRAD21.1//CDKB2;1//ATWHY1//ATE2FA
GO:0006260	DNA replication	BP	0.00363355522703016	AtTOP3alpha//ATMAP65-3//AtRAD21.1//ASF1B//UBC19//CDKB2;1//ATWHY1//ATE2FA
GO:0051052	regulation of DNA metabolic process	BP	0.00445024188704217	AtTOP3alpha//ATMAP65-3//AtRAD21.1//CDKB2;1//ATWHY1//ATE2FA
GO:0022603	regulation of anatomical structure morph...	BP	0.00693622214864477	ATROPGEF14//THE1//UBC19//CDKB2;1//YUC11
GO:0045185	maintenance of protein location	BP	0.0120505007185447	SCR//POD1
GO:0042023	DNA endoreduplication	BP	0.0127889657886697	ATMAP65-3//UBC19//CDKB2;1//ATE2FA
GO:0044786	cell cycle DNA replication	BP	0.0127889657886697	ATMAP65-3//UBC19//CDKB2;1//ATE2FA
GO:0051651	maintenance of location in cell	BP	0.0145635417162831	SCR//POD1
GO:0009828	plant-type cell wall loosening	BP	0.0201949630510965	ATEXLA1//ATEXP12
GO:0006333	chromatin assembly or disassembly	BP	0.0216485803766656	ASF1B//AT4G40040//HMGA//INO
GO:0007067	mitotic nuclear division	BP	0.0217795585845379	AtTOP3alpha//ATMAP65-3//AtRAD21.1
GO:0051321	meiotic cell cycle	BP	0.0220732216637223	AtTOP3alpha//ATMAP65-3//AtRAD21.1//ARAKIN//AT3G16020//ATE2FA
GO:0007051	spindle organization	BP	0.0232981962069607	ATMAP65-3//CDKB2;1
GO:0051225	spindle assembly	BP	0.0232981962069607	ATMAP65-3//CDKB2;1
GO:0051235	maintenance of location	BP	0.0278633329605086	SCR//POD1//ATCOAD//ANAC040
GO:0007131	reciprocal meiotic recombination	BP	0.0292210606069199	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020
GO:0035825	reciprocal DNA recombination	BP	0.0292210606069199	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020
GO:0070925	organelle assembly	BP	0.0300433168899814	ATMAP65-3//CDKB2;1
GO:0007127	meiosis I	BP	0.032052695267073	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020
GO:0006261	DNA-dependent DNA replication	BP	0.033526861059375	AtTOP3alpha//AtRAD21.1//ASF1B//ATE2FA
GO:0051726	regulation of cell cycle	BP	0.0355188409601406	AtTOP3alpha//ATMAP65-3//AtRAD21.1//ASF1B//CDKB2;1//ATE2FA
GO:0045132	meiotic chromosome segregation	BP	0.0381838883576946	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020
GO:0051510	regulation of unidimensional cell growth	BP	0.0417327132718547	ATROPGEF14//THE1//UBC19
GO:0006325	chromatin organization	BP	0.0422680286784304	AtTOP3alpha//ATMAP65-3//AtRAD21.1//ASF1B//AT4G40040//AT1G52310//CDKB2;1//HMGA//INO
GO:0071554	cell wall organization or biogenesis	BP	0.0440738055153456	CYP705A1//XTH25//ATXT1//ATEXLA1//VTC2//ARAKIN//ATEXP12//ATCSLE1//ATPME1//AT1G09460//PKDM7D//LUH
GO:0008283	cell proliferation	BP	0.0449429396345115	ATMAP65-3//UBC19//CDKB2;1//HMGA//ATE2FA
GO:0009630	gravitropism	BP	0.0467298793421897	SCR//AtVPS15//CID4//PKDM7D
GO:0009629	response to gravity	BP	0.0485566797389367	SCR//AtVPS15//CID4//PKDM7D
GO:0022604	regulation of cell morphogenesis	BP	0.049027757143554	ATROPGEF14//THE1//UBC19
GO:0043604	amide biosynthetic process	BP	0.0497304741519003	ATTSM1//AT2G38660
GO:0051276	chromosome organization	BP	0.0513927197803325	AtTOP3alpha//ATMAP65-3//AtRAD21.1//ASF1B//AT4G40040//AT3G16020//AT1G52310//CDKB2;1//ATWHY1//HMGA//INO
GO:0045786	negative regulation of cell cycle	BP	0.0541008058449841	ASF1B//CDKB2;1
GO:0006914	autophagy	BP	0.0542140794235927	AT4G17250//LSD1//AT4G02880
GO:0009108	coenzyme biosynthetic process	BP	0.0542712496822826	ATNADK-1//ATCOAD//AT2G38660//GPPS
GO:0044711	single-organism biosynthetic process	BP	0.0546589173172894	CYP705A1//AT5G19920//ATROPGEF14//TAT7//ATMAP65-3//ATST2A//ATXT1//GH3.5//VTC2//ARAKIN//LUP5//LAG13//ATNADK-1//UBC19//ATMYB30//AT3G28140//ATGPAT2//CDKB2;1//ATCSLE1//ACO2//JAZ5//AT1G19710//ATSPS3F//ATWHY1//ATE2FA//PKDM7D//ATCOAD//ANAC040//AT2G38660//GPPS//ATCSLB02//ACPT//LUH
GO:0007346	regulation of mitotic cell cycle	BP	0.0596524154486771	ATMAP65-3//ASF1B//CDKB2;1
GO:0006310	DNA recombination	BP	0.0622346846365039	AtTOP3alpha//ATMAP65-3//AtRAD21.1//ASF1B//AT3G16020
GO:0009606	tropism	BP	0.062432899405157	SCR//AtVPS15//CID4//PKDM7D
GO:0071103	DNA conformation change	BP	0.0624642224282776	AtTOP3alpha//AT4G40040//HMGA
GO:0000038	very long-chain fatty acid metabolic pro...	BP	0.0632264773407289	LAG13//ATMYB30
GO:0014070	response to organic cyclic compound	BP	0.0633906629492428	THE1//AT3G60690//AtVPS15//GH3.5//LSD1//ARAKIN//ATMYB30//AT3G03000//AT1G52310//CDKB2;1//ATMYB95//ATUGT85A1//ATRDRP1//AT1G24530
GO:1903046	meiotic cell cycle process	BP	0.0645691568290978	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020
GO:0001558	regulation of cell growth	BP	0.0682691281017345	ATROPGEF14//THE1//UBC19
GO:0009165	nucleotide biosynthetic process	BP	0.0689553943576927	AT5G19920//ATNADK-1//ATE2FA//ATCOAD
GO:1903047	mitotic cell cycle process	BP	0.0711808878504021	AtTOP3alpha//ATMAP65-3//AtRAD21.1//ASF1B//CDKB2;1
GO:1901293	nucleoside phosphate biosynthetic proces...	BP	0.0712049487963608	AT5G19920//ATNADK-1//ATE2FA//ATCOAD
GO:0009605	response to external stimulus	BP	0.0726085684505837	ATRAR1//ATMAP65-3//BGLU31//ATXT1//AT3G60690//SCR//DIN11//AtVPS15//VTC2//LSD1//ARAKIN//PAPP2C//DIN4//ATMYB30//CID4//AT3G03000//ATTLP9//AT1G52310//AT1G77770//ATPUB17//POD1//JAZ5//ATRDRP1//PKDM7D//MEE14//ATCOR413-PM1
GO:0000086	G2/M transition of mitotic cell cycle	BP	0.0728282480703022	ATMAP65-3//CDKB2;1
GO:0010389	regulation of G2/M transition of mitotic...	BP	0.0728282480703022	ATMAP65-3//CDKB2;1
GO:0044839	cell cycle G2/M phase transition	BP	0.0728282480703022	ATMAP65-3//CDKB2;1
GO:0052386	cell wall thickening	BP	0.0728282480703022	VTC2//ARAKIN
GO:0052543	callose deposition in cell wall	BP	0.0728282480703022	VTC2//ARAKIN
GO:1902749	regulation of cell cycle G2/M phase tran...	BP	0.0728282480703022	ATMAP65-3//CDKB2;1
GO:0010608	posttranscriptional regulation of gene e...	BP	0.0749478188960926	ATRAR1//ATTIF3K1//AT1G52310//ATRDRP1//AT1G65220
GO:0000280	nuclear division	BP	0.0768713656559223	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020//CDKB2;1
GO:0016458	gene silencing	BP	0.0775022548007655	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT1G52310//CDKB2;1//ATRDRP1
GO:0006270	DNA replication initiation	BP	0.0777942731893627	AtTOP3alpha//ATE2FA
GO:0006417	regulation of translation	BP	0.0777942731893627	ATTIF3K1//AT1G65220
GO:0051301	cell division	BP	0.0826185556422952	ATMAP65-3//AtRAD21.1//ASF1B//SCR//CDKB2;1//ATE2FA
GO:0000303	response to superoxide	BP	0.0828635399946705	AtVPS15//LSD1
GO:0000305	response to oxygen radical	BP	0.0828635399946705	AtVPS15//LSD1
GO:0016572	histone phosphorylation	BP	0.0828635399946705	ATMAP65-3//CDKB2;1
GO:0044764	multi-organism cellular process	BP	0.0828635399946705	ASF1B//TOM3
GO:0007059	chromosome segregation	BP	0.0830073714242493	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020
GO:0009744	response to sucrose	BP	0.0830073714242493	DRM1//DIN11//ATSEN1//DIN4
GO:0022402	cell cycle process	BP	0.0833813095864877	AtTOP3alpha//ATMAP65-3//AtRAD21.1//ASF1B//UBC19//AT3G16020//CDKB2;1//ATE2FA
GO:0042545	cell wall modification	BP	0.0843650566503597	ATEXLA1//VTC2//ARAKIN//ATEXP12//ATPME1//LUH
GO:0010564	regulation of cell cycle process	BP	0.0870719318775028	ATMAP65-3//AtRAD21.1//CDKB2;1
GO:0034285	response to disaccharide	BP	0.0879820657168879	DRM1//DIN11//ATSEN1//DIN4
GO:0009110	vitamin biosynthetic process	BP	0.0880310875386826	TAT7//VTC2
GO:0009817	defense response to fungus, incompatible...	BP	0.0880310875386826	ATRAR1//ATPUB17
GO:0051128	regulation of cellular component organiz...	BP	0.0897270418994949	ATROPGEF14//THE1//ATMAP65-3//UBC19//AT3G16020//ATWHY1
GO:0001666	response to hypoxia	BP	0.0903985429707658	LSD1//AT1G19710//ATSPS3F
GO:0009725	response to hormone	BP	0.0928228828785519	THE1//ATST2A//AT3G60690//DIN11//ATSEN1//AtVPS15//GH3.5//VTC2//LSD1//ARAKIN//UGT71C3//ATMYB30//CDKB2;1//ATMYB95//ACO2//JAZ5//RSL4//ATUGT85A1//ATRDRP1//AT1G24530//ATCOR413-PM1
GO:0006413	translational initiation	BP	0.0932920930235433	ATTIF3K1//AT1G65220
GO:1901987	regulation of cell cycle phase transitio...	BP	0.0932920930235433	ATMAP65-3//CDKB2;1
GO:1901990	regulation of mitotic cell cycle phase t...	BP	0.0932920930235433	ATMAP65-3//CDKB2;1
GO:0007126	meiotic nuclear division	BP	0.0957083156840005	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020
GO:0009694	jasmonic acid metabolic process	BP	0.0957083156840005	ATST2A//ARAKIN//ATMYB95//JAZ5
GO:0036293	response to decreased oxygen levels	BP	0.0972083639590361	LSD1//AT1G19710//ATSPS3F
GO:0070482	response to oxygen levels	BP	0.0972083639590361	LSD1//AT1G19710//ATSPS3F
GO:0048285	organelle fission	BP	0.101995261270005	AtTOP3alpha//ATMAP65-3//AtRAD21.1//AT3G16020//CDKB2;1
GO:0000724	double-strand break repair via homologou...	BP	0.104075858027982	AtRAD21.1//ASF1B
GO:0000725	recombinational repair	BP	0.104075858027982	AtRAD21.1//ASF1B
GO:0044770	cell cycle phase transition	BP	0.109589633924357	ATMAP65-3//CDKB2;1
GO:0044772	mitotic cell cycle phase transition	BP	0.109589633924357	ATMAP65-3//CDKB2;1
GO:0018205	peptidyl-lysine modification	BP	0.111181870722206	AtTOP3alpha//ATMAP65-3//AT5G23390//CDKB2;1//PKDM7D
GO:0044403	symbiosis, encompassing mutualism throug...	BP	0.111426247567715	ATMAP65-3//AT1G52310//TOM3
GO:0044419	interspecies interaction between organis...	BP	0.111426247567715	ATMAP65-3//AT1G52310//TOM3
GO:0009751	response to salicylic acid	BP	0.111780772216034	AT3G60690//AtVPS15//LSD1//ARAKIN//ATMYB30//AT3G03000//ATMYB95//ATUGT85A1//ATRDRP1
GO:0032502	developmental process	BP	0.111819527570013	ATROPGEF14//EIP9//AtTOP3alpha//THE1//ATMAP65-3//emb1441//AtRAD21.1//ASF1B//AT5G23390//ATXT1//ATMKP1//SCR//DIN11//ATEXLA1//ATSEN1//AtVPS15//PEP//LSD1//ARAKIN//UBC19//ATEXP12//AT1G52310//CDKB2;1//POD1//ATTSM1//ACO2//YUC11//RSL4//HMGA//INO//PYL6//ATE2FA//AT1G09460//PKDM7D//MEE14//AT2G20150//ANAC040//GPPS//LUH
GO:0009723	response to ethylene	BP	0.113734663953926	DIN11//AtVPS15//LSD1//UGT71C3//ATMYB30//ACO2//JAZ5
GO:0010410	hemicellulose metabolic process	BP	0.115099373901168	CYP705A1//ATXT1//PKDM7D
GO:0006334	nucleosome assembly	BP	0.115178894384955	AT4G40040//HMGA
GO:0034728	nucleosome organization	BP	0.115178894384955	AT4G40040//HMGA
GO:0050665	hydrogen peroxide biosynthetic process	BP	0.120839460191041	AT5G23390//PKDM7D
GO:0065004	protein-DNA complex assembly	BP	0.120839460191041	AT4G40040//HMGA
GO:0071824	protein-DNA complex subunit organization	BP	0.120839460191041	AT4G40040//HMGA
GO:0009753	response to jasmonic acid	BP	0.121183388572012	ATST2A//ATSEN1//VTC2//ARAKIN//ATMYB30//ATMYB95//JAZ5//ATUGT85A1//ATRDRP1
GO:0045934	negative regulation of nucleobase-contai...	BP	0.125651667465741	AtTOP3alpha//ATMAP65-3//AT1G52310//CDKB2;1//ATWHY1//LUH