4.0:Analysis result:Information of module
phyB mutant 16C 10hrs

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0071368
cellular response to cytokinin stimulus
BP3.913e-03ATPAO5 AHP4 SRD2 ARR12
GO:0009735
response to cytokinin
BP1.241e-02ATPAO5 AHP4 SRD2 ARR12
GO:0009117
nucleotide metabolic process
BP1.295e-02emb2734 GME AT5G44520 APT5 PGR5-LIKE AT3G22910 AT3G19120 DEG1 Hop1 EMB1860
GO:0006753
nucleoside phosphate metabolic process
BP1.327e-02emb2734 GME AT5G44520 APT5 PGR5-LIKE AT3G22910 AT3G19120 DEG1 Hop1 EMB1860
GO:0032101
regulation of response to external stimu...
BP1.641e-02AT5G18200 ATHLECRK
GO:0071804
cellular potassium ion transport
BP1.919e-02ATKT4 ATNHX7
GO:0071805
potassium ion transmembrane transport
BP1.919e-02ATKT4 ATNHX7
GO:0055086
nucleobase-containing small molecule met...
BP2.146e-02emb2734 GME AT5G44520 APT5 PGR5-LIKE AT3G22910 AT3G19120 DEG1 Hop1 EMB1860
GO:0042440
pigment metabolic process
BP2.442e-02COX15 MYC3 APT5 ATCRY1 DEG1 ARR12 AT2G20920
GO:0009736
cytokinin-activated signaling pathway
BP2.519e-02ATPAO5 AHP4 ARR12
GO:0010304
PSII associated light-harvesting complex...
BP2.857e-02PGR5-LIKE DEG1
GO:0006869
lipid transport
BP3.356e-02ALA2 AT5G01870 ATNHX7 cdf3
GO:0000338
protein deneddylation
BP4.119e-02AT5G35910 Hop1 EMB1860
GO:0010388
cullin deneddylation
BP4.119e-02AT5G35910 Hop1 EMB1860
GO:0072503
cellular divalent inorganic cation homeo...
BP4.332e-02ATCRY1 AT3G22910
GO:0019321
pentose metabolic process
BP4.736e-02ATPLC4 AT5G44520
GO:0005996
monosaccharide metabolic process
BP4.895e-02GME ATPLC4 AT5G44520 AT5G18200 ACT8
GO:0051301
cell division
BP5.137e-02AT5G25590 CAA33 DDB1B GRP23 ATRX AT2G28790 HOS9
GO:0046390
ribose phosphate biosynthetic process
BP5.180e-02AT5G44520 AT3G22910 AT3G19120 EMB1860
GO:0098655
cation transmembrane transport
BP5.849e-02AT3G22910 ATKT4 ATNHX7
GO:0098660
inorganic ion transmembrane transport
BP5.849e-02AT3G22910 ATKT4 ATNHX7
GO:0098662
inorganic cation transmembrane transport
BP5.849e-02AT3G22910 ATKT4 ATNHX7
GO:0019637
organophosphate metabolic process
BP5.918e-02emb2734 GME AT5G44520 APT5 AT5G04980 AT3G52570 PGR5-LIKE AT3G22910 AT3G19120 DEG1 Hop1 EMB1860
GO:0046283
anthocyanin-containing compound metaboli...
BP6.120e-02MYC3 ATCRY1 ARR12
GO:0009640
photomorphogenesis
BP6.143e-02AT5G35910 DDB1B ATCRY1 Hop1 EMB1860
GO:0015748
organophosphate ester transport
BP6.481e-02ALA2 cdf3
GO:0072507
divalent inorganic cation homeostasis
BP6.481e-02ATCRY1 AT3G22910
GO:0010876
lipid localization
BP7.187e-02ALA2 ATGRP-8 AT5G01870 ATNHX7 cdf3
GO:0019693
ribose phosphate metabolic process
BP7.289e-02AT5G44520 PGR5-LIKE AT3G22910 AT3G19120 DEG1 EMB1860
GO:0006778
porphyrin-containing compound metabolic ...
BP7.907e-02COX15 DEG1 ARR12 AT2G20920
GO:0033013
tetrapyrrole metabolic process
BP7.907e-02COX15 DEG1 ARR12 AT2G20920
GO:0009880
embryonic pattern specification
BP7.909e-02DDB1B SRD2
GO:0006813
potassium ion transport
BP8.404e-02ATKT4 ATNHX7
GO:0015711
organic anion transport
BP8.925e-02ALA2 AT5G19070 ATHLECRK CML41 cdf3
GO:0012501
programmed cell death
BP9.338e-02LAZ5 ATCAD7 ATCRY1 AT1G28570 cdf3
GO:0009165
nucleotide biosynthetic process
BP9.549e-02emb2734 AT3G22910 AT3G19120 Hop1 EMB1860
GO:1901293
nucleoside phosphate biosynthetic proces...
BP9.761e-02emb2734 AT3G22910 AT3G19120 Hop1 EMB1860
GO:0006664
glycolipid metabolic process
BP1.014e-01AT3G52570 ATKT4 ATATG18H
GO:1903509
liposaccharide metabolic process
BP1.049e-01AT3G52570 ATKT4 ATATG18H
GO:0009694
jasmonic acid metabolic process
BP1.119e-01CYP94B3 ATMYB95 JAZ7
GO:0006725
cellular aromatic compound metabolic pro...
BP1.177e-01emb2734 GME AT5G25590 AT5G59450 CRCK1 COX15 MYC3 AT5G44520 ATS AT5G35910 CYP86B1 anac086 APT5 AT5G10800 ATOFP1 ATX3 AT3G49130 ATCAD7 ATCBF1 PGR5-LIKE DDB1B ATCRY1 AT4G00870 CYP704B1 AT3G22910 AT3G19120 ATPRP40B DEG1 AT3G17740 AT3G23620 AT1G13340 Hop1 AAC42 ATMYB95 ATVLN2 EMB1860 AT1G14460 AGL12 SCL-3 SRD2 ARR12 GRP23 AT1G27050 AT2G20920 HOS9
GO:0016036
cellular response to phosphate starvatio...
BP1.191e-01AT5G18200 ATKT4 ATATG18H
GO:0042325
regulation of phosphorylation
BP1.211e-01CYCP1;1 PDF1
GO:0009639
response to red or far red light
BP1.224e-01AT5G35910 PGR5-LIKE DDB1B ATCRY1 Hop1 EMB1860
GO:0034220
ion transmembrane transport
BP1.227e-01AT3G22910 ATKT4 ATNHX7
GO:0009414
response to water deprivation
BP1.245e-01ATCBF1 ATCRY1 ATATG18H cdf3 JAZ7 AT2G23120
GO:0006098
pentose-phosphate shunt
BP1.265e-01AT5G44520 PGR5-LIKE DEG1
GO:0051156
glucose 6-phosphate metabolic process
BP1.265e-01AT5G44520 PGR5-LIKE DEG1
GO:0006816
calcium ion transport
BP1.267e-01AT3G22910 ATNHX7
GO:1901135
carbohydrate derivative metabolic proces...
BP1.272e-01GME AT5G44520 APT5 AT3G52570 AT3G45160 PGR5-LIKE AT3G22910 AT3G19120 DEG1 ATKT4 EMB1860 ATATG18H
GO:0009415
response to water
BP1.287e-01ATCBF1 ATCRY1 ATATG18H cdf3 JAZ7 AT2G23120
GO:1901659
glycosyl compound biosynthetic process
BP1.292e-01AT3G45160 AT3G22910 DEG1 ATKT4
GO:0006739
NADP metabolic process
BP1.302e-01AT5G44520 PGR5-LIKE DEG1
GO:0050790
regulation of catalytic activity
BP1.381e-01AT2G39850 CYCP1;1 PGR5-LIKE ATSBT1.1
GO:0008219
cell death
BP1.399e-01LAZ5 ATCAD7 ATCRY1 AT1G28570 cdf3
GO:0016265
death
BP1.399e-01LAZ5 ATCAD7 ATCRY1 AT1G28570 cdf3
GO:0006787
porphyrin-containing compound catabolic ...
BP1.437e-01DEG1 AT2G20920
GO:0006875
cellular metal ion homeostasis
BP1.437e-01ATCRY1 AT3G22910
GO:0015996
chlorophyll catabolic process
BP1.437e-01DEG1 AT2G20920
GO:0033015
tetrapyrrole catabolic process
BP1.437e-01DEG1 AT2G20920
GO:0046149
pigment catabolic process
BP1.437e-01DEG1 AT2G20920
GO:0051187
cofactor catabolic process
BP1.437e-01DEG1 AT2G20920
GO:0046496
nicotinamide nucleotide metabolic proces...
BP1.456e-01AT5G44520 PGR5-LIKE DEG1
GO:0055114
oxidation-reduction process
BP1.478e-01COX15 AT5G44520 CYP86B1 APT5 AT3G52570 CYP94B3 ATCAD7 ATPAO5 ACD1-LIKE PGR5-LIKE ATCRY1 AT4G02940 FAD2 CYP704B1 ATUBC2-1
GO:0019362
pyridine nucleotide metabolic process
BP1.495e-01AT5G44520 PGR5-LIKE DEG1
GO:0010118
stomatal movement
BP1.495e-01ATHLECRK ATCRY1
GO:0043094
cellular metabolic compound salvage
BP1.495e-01APT5 EMB1860
GO:0051186
cofactor metabolic process
BP1.533e-01COX15 AT5G44520 PGR5-LIKE DEG1 ARR12 AT2G20920
GO:0046148
pigment biosynthetic process
BP1.535e-01COX15 MYC3 APT5 ARR12
GO:0005986
sucrose biosynthetic process
BP1.552e-01875_
GO:0007033
vacuole organization
BP1.552e-01192_
GO:0009112
nucleobase metabolic process
BP1.552e-01413_
GO:0010082
regulation of root meristem growth
BP1.552e-01374_
GO:0046834
lipid phosphorylation
BP1.552e-01803_
GO:0046854
phosphatidylinositol phosphorylation
BP1.552e-01803_
GO:0051193
regulation of cofactor metabolic process
BP1.552e-01374_
GO:0090056
regulation of chlorophyll metabolic proc...
BP1.552e-01374_
GO:1901657
glycosyl compound metabolic process
BP1.555e-01APT5 AT3G45160 AT3G22910 DEG1 ATKT4
GO:0009260
ribonucleotide biosynthetic process
BP1.575e-01AT3G22910 AT3G19120 EMB1860
GO:0072524
pyridine-containing compound metabolic p...
BP1.575e-01AT5G44520 PGR5-LIKE DEG1
GO:0044550
secondary metabolite biosynthetic proces...
BP1.608e-01CYP86B1 AT3G45160 ATCAD7 DEG1 ATKT4
GO:0006643
membrane lipid metabolic process
BP1.615e-01AT3G52570 ATKT4 ATATG18H
GO:0035670
plant-type ovary development
BP1.615e-01ATS AGL12 HOS9
GO:0048481
ovule development
BP1.615e-01ATS AGL12 HOS9
GO:0009697
salicylic acid biosynthetic process
BP1.672e-01CRCK1 AT1G13340
GO:0072522
purine-containing compound biosynthetic ...
BP1.672e-01APT5 AT3G22910
GO:0006012
galactose metabolic process
BP1.693e-01029_
GO:0010020
chloroplast fission
BP1.693e-01459_
GO:0046174
polyol catabolic process
BP1.693e-01803_
GO:0048598
embryonic morphogenesis
BP1.693e-01354_
GO:0052541
plant-type cell wall cellulose metabolic...
BP1.693e-01941_
GO:1901401
regulation of tetrapyrrole metabolic pro...
BP1.693e-01374_
GO:0009812
flavonoid metabolic process
BP1.695e-01MYC3 ATCRY1 AT1G28570 ARR12
GO:0040007
growth
BP1.717e-01ATGRP-8 ATOFP1 ATCRY1 PDF1 ACT8 AGL12 ARR12 AT1G12070 AT2G28240 HOS9
GO:0046488
phosphatidylinositol metabolic process
BP1.732e-01AT5G04980 AT3G52570
GO:0016144
S-glycoside biosynthetic process
BP1.779e-01AT3G45160 DEG1 ATKT4
GO:0019758
glycosinolate biosynthetic process
BP1.779e-01AT3G45160 DEG1 ATKT4
GO:0019761
glucosinolate biosynthetic process
BP1.779e-01AT3G45160 DEG1 ATKT4
GO:0048581
negative regulation of post-embryonic de...
BP1.792e-01DDB1B ATUBC2-1
GO:0000302
response to reactive oxygen species
BP1.794e-01CRCK1 CAA33 ATCRY1 ATNHX7