4.0:Analysis result:Information of module
ms35 silique stage 9.10

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0010224
response to UV-B
BP2.196e-03ATREV1 ATGSTF12 ATFLS1 CYP75B1 ATRPA70B ATPDX1 F3'H ELIP
GO:0055114
oxidation-reduction process
BP4.018e-03NDHF CYP74B2 AT4G15940 AT1G58150 CYP71B11 ATVDAC2 AT5G63620 AtGulLO7 AT5G55070 CI76 AT5G14590 AtGulLO3 ATFLS1 CYP75B1 F3'H ATGLDH CYP96A9 IDH-I AR2 RPT2a sks10 NDB3 PyrD APR ATMSD1 GluTRBP PDLZ2 CYP77A6 PGDH CYP86A4 LPR2 ATGSTU11 AT1G21350 AT1G14810 ALDH5F1 ATPAO4 AT1G05350 RCI3 CYP702A1 APR2 HMG2 ATCKX2 SQE2
GO:0009684
indoleacetic acid biosynthetic process
BP4.329e-03CYP74B2 TAR2 APR PGDH AT1G52200 AT2G04400 CYP702A1
GO:0009683
indoleacetic acid metabolic process
BP4.811e-03CYP74B2 TAR2 APR PGDH AT1G52200 AT2G04400 CYP702A1
GO:0009718
anthocyanin-containing compound biosynth...
BP7.517e-03ATGSTF12 ATFLS1 CYP75B1 F3'H ELIP
GO:0001510
RNA methylation
BP8.421e-03AT5G16130 AT5G15520 AT5G59850 AT5G58420 ATHD2 RUXF AT3G22660 AT3G09200 AT3G02220 AT2G20450
GO:0009851
auxin biosynthetic process
BP8.594e-03CYP74B2 TAR2 APR PGDH AT1G52200 AT2G04400 CYP702A1
GO:0008037
cell recognition
BP9.638e-03ARK3 AT4G03230 AT1G11280 AT1G11330
GO:0048544
recognition of pollen
BP9.638e-03ARK3 AT4G03230 AT1G11280 AT1G11330
GO:0070972
protein localization to endoplasmic reti...
BP1.004e-02AT1G48900 AT1G19970 ATHSRP54A
GO:0042435
indole-containing compound biosynthetic ...
BP1.115e-02CYP74B2 TAR2 APR PGDH AT1G52200 AT2G04400 CYP702A1
GO:0006662
glycerol ether metabolic process
BP1.131e-02ATPDI11 ATPDI6 ATH7 ATPDI9
GO:0018904
ether metabolic process
BP1.131e-02ATPDI11 ATPDI6 ATH7 ATPDI9
GO:0009567
double fertilization forming a zygote an...
BP1.268e-02ATPDI11 KPL VDD
GO:0009744
response to sucrose
BP1.369e-02FD-GOGAT ATGSTF12 GLN1;4 ATFLS1 CYP75B1 F3'H UXS5 AT4G08790 ELIP ATOEP16-1
GO:0034285
response to disaccharide
BP1.369e-02FD-GOGAT ATGSTF12 GLN1;4 ATFLS1 CYP75B1 F3'H UXS5 AT4G08790 ELIP ATOEP16-1
GO:0044283
small molecule biosynthetic process
BP1.376e-02CYP74B2 FD-GOGAT CP1 PUT2 ACP5 AT5G54860 AT5G44710 GLN1;4 AtGulLO3 KCS19 ATPDX1 AT3G56350 AT3G48460 ATGLDH AT3G45040 SQS2 TAR2 AtDIR6 PyrD FLA2 APR AT4G03450 CER60 AT3G19400 AT3G10720 AT3G07720 PGDH AT1G52200 JMT AT1G26640 NIP6 AGL67 AT1G14810 AT1G09320 AT2G04400 ATLUP1 RCI3 CYP702A1 HMG2 AT2G42320 SQE2
GO:0045454
cell redox homeostasis
BP1.421e-02ATPDI11 APR ATPDI6 ATH7 APR2 AT2G30540 ATPDI9
GO:0009451
RNA modification
BP1.436e-02AT5G16130 AT5G15520 DIM1B AT5G59850 AT5G58420 AT5G46390 ATHD2 RUXF AT3G22660 AT3G09200 AT3G02220 CLB19 AT2G20450 AT1G60590
GO:0034754
cellular hormone metabolic process
BP1.458e-02CYP74B2 TAR2 APR PGDH AT1G52200 AT2G04400 CYP702A1 ATCKX2
GO:0009875
pollen-pistil interaction
BP1.520e-02ARK3 AT4G03230 AT1G11280 AT1G11330
GO:0009566
fertilization
BP1.568e-02ATPDI11 KPL VDD
GO:0042545
cell wall modification
BP1.817e-02AT5G59850 QRT1 PME35 AT3G49220 ATEXPB3 AT4G28370 QRT3 RLK902 AT3G10720 AT3G09200 AT1G01300 AT-EXP10 AT1G64800
GO:0006817
phosphate ion transport
BP1.904e-02AT1G69480 AT1G14040 PHT1;5
GO:0006569
tryptophan catabolic process
BP1.906e-02CYP74B2 PGDH AT1G52200 AT2G04400 CYP702A1
GO:0046218
indolalkylamine catabolic process
BP1.906e-02CYP74B2 PGDH AT1G52200 AT2G04400 CYP702A1
GO:0009850
auxin metabolic process
BP1.917e-02CYP74B2 TAR2 APR PGDH AT1G52200 AT2G04400 CYP702A1
GO:0042436
indole-containing compound catabolic pro...
BP2.103e-02CYP74B2 PGDH AT1G52200 AT2G04400 CYP702A1
GO:0009310
amine catabolic process
BP2.153e-02CYP74B2 PGDH AT1G52200 ATPAO4 AT2G04400 CYP702A1
GO:0042402
cellular biogenic amine catabolic proces...
BP2.153e-02CYP74B2 PGDH AT1G52200 ATPAO4 AT2G04400 CYP702A1
GO:0006767
water-soluble vitamin metabolic process
BP2.245e-02AtGulLO3 ATPDX1 ATGLDH PyrD
GO:0042364
water-soluble vitamin biosynthetic proce...
BP2.245e-02AtGulLO3 ATPDX1 ATGLDH PyrD
GO:0009292
genetic transfer
BP2.277e-02ATX5 ATHD2 GTE2
GO:0009294
DNA mediated transformation
BP2.277e-02ATX5 ATHD2 GTE2
GO:0009074
aromatic amino acid family catabolic pro...
BP2.536e-02CYP74B2 PGDH AT1G52200 AT2G04400 CYP702A1
GO:1901617
organic hydroxy compound biosynthetic pr...
BP2.536e-02FD-GOGAT PUT2 AT5G54860 ATGSTF12 ATPDX1 ATMYB11 AT3G48460 AT3G45040 SQS2 AtDIR6 FLA2 AT4G03450 AT3G10720 AT3G07720 NIP6 AT1G09320 ATLUP1 RCI3 HMG2 SQE2
GO:0042430
indole-containing compound metabolic pro...
BP2.693e-02CYP74B2 TAR2 APR PGDH AT1G52200 AT2G04400 CYP702A1
GO:0009110
vitamin biosynthetic process
BP2.828e-02AtGulLO3 ATPDX1 ATGLDH PyrD
GO:0044711
single-organism biosynthetic process
BP3.078e-02ATPDI11 CYP74B2 FD-GOGAT ATCSLD6 AtHBP5 CP1 PUT2 AT1G58150 ACP5 ATFC-I CYCA2;1 AT5G63905 GPAT9 AT5G54860 AT5G44710 TUB4 ATUBC8 ATHD2 ATGSTF12 GLN1;4 AtGulLO3 ATFLS1 CYP75B1 DHS KCS19 ATPDX1 ATMYB11 AT3G56350 AT3G52500 DGAT2 GMD2 F3'H ICK2 AT3G48460 ATGLDH AT3G45040 ATCESA2 SQS2 RPT2a TAR2 AtDIR6 PyrD FLA2 ATSPS4F APR AT4G03450 CER60 TPPD ATMSD1 AT3G19400 GluTRBP ELIP CRM3 AT3G10720 PDLZ2 ATCSLC06 AT3G07720 PGDH DPMS1 AT1G52200 ATGSTU11 AT1G07440 AT1G75420 JMT AT1G26640 NIP6 ATCCR2 AGL67 AT1G14810 ATPAO4 AT2G36145 AT1G09320 AT2G04400 ATLUP1 RCI3 CYP702A1 HMG2 FEI2 AT2G42320 PECT1 SQE2 WDR55
GO:0007033
vacuole organization
BP3.150e-02YLS8 AP-3 PMP AT3G08930
GO:0044281
small molecule metabolic process
BP3.211e-02NDHF ATPDI11 CYP74B2 AT4G15940 FD-GOGAT CP1 PUT2 AT1G58150 ACP5 ATFC-I ATVDAC2 DIM1B AT5G55070 AT5G54860 AT5G44710 CI76 NIC2 ATHD2 GLN1;4 AT5G14590 AtGulLO3 DPA4 KCS19 ATPDX1 AGK2 AT3G56350 AT3G52500 GMD2 AT3G48460 ATGLDH UXS5 AT3G45040 ATCESA2 IDH-I SQS2 RPT2a TAR2 AtDIR6 PyrD FLA2 APR AT4G03450 CER60 AT1G17960 ATMSD1 ABCE1 AT3G19400 AT3G10720 PDLZ2 CHAT AT3G07720 PGDH CYP86A4 ATPDI6 AT1G52200 ATGSTU11 AT1G07440 JMT AT1G26640 NIP6 AGL67 AT1G14810 ALDH5F1 ATH7 AT1G64800 AT2G36145 AT1G09320 AT2G04400 ATLUP1 RCI3 CYP702A1 HMG2 AT2G42320 AT-CDA1 SQE2 WDR55 ATPDI9
GO:0046283
anthocyanin-containing compound metaboli...
BP3.564e-02ATGSTF12 ATFLS1 CYP75B1 F3'H ELIP
GO:0009063
cellular amino acid catabolic process
BP3.587e-02CYP74B2 AT3G52500 PGDH AT1G52200 ALDH5F1 AT1G64800 AT2G04400 CYP702A1
GO:1901606
alpha-amino acid catabolic process
BP3.587e-02CYP74B2 AT3G52500 PGDH AT1G52200 ALDH5F1 AT1G64800 AT2G04400 CYP702A1
GO:0015980
energy derivation by oxidation of organi...
BP3.659e-02NDHF AT1G58150 ATVDAC2 AT5G55070 CI76 IDH-I ATMSD1
GO:0009411
response to UV
BP3.717e-02ATREV1 ATGSTF12 ATFLS1 CYP75B1 ATRPA70B ATPDX1 F3'H ELIP DRT102 FEI2
GO:0016036
cellular response to phosphate starvatio...
BP3.842e-02AT1G69480 ATPAH1 PDLZ2 LPR2 ATGSTU11 AT1G14040
GO:0046148
pigment biosynthetic process
BP4.050e-02FD-GOGAT AtHBP5 ATFC-I ATGSTF12 ATFLS1 CYP75B1 ATMYB11 F3'H GluTRBP ELIP
GO:0016054
organic acid catabolic process
BP4.134e-02CYP74B2 AT4G15940 DPA4 AT3G52500 RPT2a ABCE1 PDLZ2 PGDH AT1G52200 ATGSTU11 ALDH5F1 AT1G64800 AT2G04400 CYP702A1
GO:0046395
carboxylic acid catabolic process
BP4.134e-02CYP74B2 AT4G15940 DPA4 AT3G52500 RPT2a ABCE1 PDLZ2 PGDH AT1G52200 ATGSTU11 ALDH5F1 AT1G64800 AT2G04400 CYP702A1
GO:1901565
organonitrogen compound catabolic proces...
BP4.395e-02CYP74B2 AT3G52500 ATCLH1 PGDH AT1G52200 ALDH5F1 AT1G64800 ATPAO4 AT2G04400 CYP702A1 AT-CDA1
GO:0051704
multi-organism process
BP4.681e-02ATPDI11 AT-BETA-AMY FD-GOGAT STT3A AT1G48900 ACBP5 ATVDAC2 KPL AT5G54860 ATX5 ATCAP-C DIR1 ATSWC6 ATHD2 APY2 VDD GTE2 AGK2 BIR6 RPT2a ATEXPB3 TAR2 ARK3 QRT3 AT4G03450 AT4G03230 AT4G02410 CER60 ATCLH1 ATMSD1 BRL3 AtRLP36 ATCSLC06 AT3G07720 PGDH ATPDI6 JMT SEC5B ATCCR2 AT1G11280 AT1G11330 ATHSRP54A ATCNGC12 AT2G04400 GLP5 ATOEP16-1 ATPDI9
GO:0006568
tryptophan metabolic process
BP4.817e-02CYP74B2 PGDH AT1G52200 AT2G04400 CYP702A1
GO:0006586
indolalkylamine metabolic process
BP4.817e-02CYP74B2 PGDH AT1G52200 AT2G04400 CYP702A1
GO:0045333
cellular respiration
BP4.935e-02NDHF ATVDAC2 AT5G55070 CI76 IDH-I ATMSD1
GO:0016126
sterol biosynthetic process
BP5.072e-02PUT2 SQS2 AtDIR6 FLA2 AT3G10720 ATLUP1 HMG2 SQE2
GO:0006576
cellular biogenic amine metabolic proces...
BP5.358e-02CYP74B2 ATAIH PGDH AT1G52200 ATPAO4 AT2G04400 CYP702A1
GO:0010267
production of ta-siRNAs involved in RNA ...
BP5.518e-02AT1G48900 ATCAP-C SDE5 ATHSRP54A
GO:0030422
production of siRNA involved in RNA inte...
BP5.529e-02KTF1 AT1G48900 ATCAP-C SDE5 ATHSRP54A
GO:0006102
isocitrate metabolic process
BP5.580e-02AT5G14590 IDH-I
GO:0006801
superoxide metabolic process
BP5.580e-02AT3G56350 ATMSD1
GO:0032270
positive regulation of cellular protein ...
BP5.580e-02AT4G16970 ASHH2
GO:0016125
sterol metabolic process
BP5.815e-02PUT2 SQS2 AtDIR6 FLA2 AT3G10720 ATLUP1 HMG2 SQE2
GO:0031050
dsRNA fragmentation
BP5.907e-02KTF1 AT1G48900 ATCAP-C SDE5 ATHSRP54A
GO:0043331
response to dsRNA
BP5.907e-02KTF1 AT1G48900 ATCAP-C SDE5 ATHSRP54A
GO:0070918
production of small RNA involved in gene...
BP5.907e-02KTF1 AT1G48900 ATCAP-C SDE5 ATHSRP54A
GO:0071359
cellular response to dsRNA
BP5.907e-02KTF1 AT1G48900 ATCAP-C SDE5 ATHSRP54A
GO:0006721
terpenoid metabolic process
BP6.022e-02FD-GOGAT AtHBP5 CP1 AT3G56350 AGL67 AT1G09320 ATLUP1 ASHH2 HMG2 SQE2
GO:0042446
hormone biosynthetic process
BP6.480e-02CYP74B2 TAR2 AtDIR6 FLA2 APR PGDH AT1G52200 AT2G04400 RCI3 CYP702A1
GO:0044106
cellular amine metabolic process
BP6.519e-02CYP74B2 ATAIH PGDH AT1G52200 ATPAO4 AT2G04400 CYP702A1
GO:0044764
multi-organism cellular process
BP6.548e-02ATX5 ATHD2 GTE2
GO:0006641
triglyceride metabolic process
BP6.648e-02GPAT9 DGAT2
GO:0046460
neutral lipid biosynthetic process
BP6.648e-02GPAT9 DGAT2
GO:0046463
acylglycerol biosynthetic process
BP6.648e-02GPAT9 DGAT2
GO:0051247
positive regulation of protein metabolic...
BP6.648e-02AT4G16970 ASHH2
GO:0019725
cellular homeostasis
BP6.717e-02ATPDI11 AP-3 APR ATPDI6 AT1G52200 ATNRAMP1 ATH7 APR2 AT2G30540 ATPDI9
GO:0042445
hormone metabolic process
BP6.981e-02CYP74B2 TAR2 AtDIR6 FLA2 APR PGDH AT1G52200 AT2G04400 RCI3 CYP702A1 ATCKX2
GO:0009686
gibberellin biosynthetic process
BP7.234e-02CP1 AT3G56350 AGL67
GO:0016102
diterpenoid biosynthetic process
BP7.234e-02CP1 AT3G56350 AGL67
GO:0006952
defense response
BP7.279e-02ATPDI11 FD-GOGAT STT3A AT1G48900 ATFC-I AT5G54860 ATCAP-C DIR1 ATSWC6 LSU2 AGK2 AT3G45040 TAR2 AtDIR6 AT4G09420 AT4G03450 ATMLO1 AT4G02410 ATCLH1 AT1G51790 ATMSD1 AtRLP36 AT3G07720 PGDH ATPDI6 AT1G51480 JMT ATCCR2 ATHSRP54A AT1G24000 AT2G04400 ASHH2 GLP5 AT1G23130 ATOEP16-1 ATPDI9
GO:0009409
response to cold
BP7.536e-02FD-GOGAT ACP5 KCS19 ERD3 CER60 ATICE1 ELIP AT3G09200 DRT102 ATCCR2 ATOCT3 ATCSP4 GLP5 RCI3 ATOEP16-1
GO:0044710
single-organism metabolic process
BP7.622e-02NDHF ATPDI11 CYP74B2 AT4G15940 FD-GOGAT KTF1 ATCSLD6 AtHBP5 CP1 PUT2 AT1G58150 AT1G48900 ACBP5 ACP5 ATFC-I CYCA2;1 CYP71B11 ATVDAC2 DIM1B AT5G63905 AT5G63620 GPAT9 AtGulLO7 AT5G55070 AT5G54860 ATCAP-C AT5G44710 ATREV1 TUB4 ATUBC8 CI76 NIC2 ATHD2 ATGSTF12 GLN1;4 AT5G14590 AtGulLO3 ATFLS1 CYP75B1 ATRPA70B DHS DPA4 KCS19 ATPDX1 AT5G01720 ATMYB11 AGK2 AT3G56350 AT3G53390 AT3G52500 DGAT2 GMD2 F3'H ICK2 AT3G49220 AT3G48460 ATGLDH UXS5 AT3G45040 ATCESA2 CYP96A9 IDH-I SQS2 AR2 RPT2a sks10 TAR2 AtDIR6 NDB3 PyrD FLA2 ATSPS4F APR AT4G03450 CER60 ATCLH1 AT1G17960 DD46 AT1G18090 AT1G51790 TPPD ATMSD1 DHAR2 ABCE1 MANIA AT3G19400 GluTRBP ATICE1 ELIP SDE5 CRM3 ATPAH1 AT3G10720 PDLZ2 CYP77A6 ATCSLC06 CHAT DRT102 AT3G07720 PGDH CYP86A4 DPMS1 LPR2 ATPDI6 AT1G52200 ATGSTU11 AT1G21350 AT1G07440 AT1G75420 JMT ATNTH2 AT1G26640 NIP6 ATCCR2 AGL67 ATHSRP54A AT1G14810 ALDH5F1 ATH7 AT1G64800 ATPAO4 AT2G36145 AT1G09320 AT2G04400 ATLUP1 ASHH2 AT1G05350 RCI3 CYP702A1 APR2 HMG2 FEI2 AT2G42320 AT-CDA1 ATCKX2 PECT1 SQE2 WDR55 ATPDI9
GO:0006694
steroid biosynthetic process
BP7.668e-02PUT2 SQS2 AtDIR6 FLA2 AT3G10720 ATLUP1 RCI3 HMG2 SQE2
GO:0016053
organic acid biosynthetic process
BP7.820e-02CYP74B2 FD-GOGAT CP1 ACP5 AT5G54860 AT5G44710 GLN1;4 AtGulLO3 KCS19 AT3G56350 ATGLDH AT3G45040 TAR2 APR AT4G03450 CER60 AT3G19400 AT3G07720 PGDH AT1G52200 JMT AT1G26640 AGL67 AT1G14810 AT1G09320 AT2G04400 CYP702A1 AT2G42320
GO:0046394
carboxylic acid biosynthetic process
BP7.820e-02CYP74B2 FD-GOGAT CP1 ACP5 AT5G54860 AT5G44710 GLN1;4 AtGulLO3 KCS19 AT3G56350 ATGLDH AT3G45040 TAR2 APR AT4G03450 CER60 AT3G19400 AT3G07720 PGDH AT1G52200 JMT AT1G26640 AGL67 AT1G14810 AT1G09320 AT2G04400 CYP702A1 AT2G42320
GO:0009743
response to carbohydrate
BP7.837e-02FD-GOGAT ATGSTF12 GLN1;4 ATFLS1 CYP75B1 AT3G53390 F3'H UXS5 AT4G08790 ATICE1 ELIP ATOEP16-1
GO:0019752
carboxylic acid metabolic process
BP7.901e-02ATPDI11 CYP74B2 AT4G15940 FD-GOGAT CP1 AT1G58150 ACP5 ATFC-I ATVDAC2 AT5G55070 AT5G54860 AT5G44710 GLN1;4 AT5G14590 AtGulLO3 DPA4 KCS19 ATPDX1 AT3G56350 AT3G52500 ATGLDH AT3G45040 IDH-I RPT2a TAR2 APR AT4G03450 CER60 AT1G17960 ATMSD1 ABCE1 AT3G19400 PDLZ2 CHAT AT3G07720 PGDH CYP86A4 AT1G52200 ATGSTU11 JMT AT1G26640 AGL67 AT1G14810 ALDH5F1 AT1G64800 AT1G09320 AT2G04400 CYP702A1 AT2G42320
GO:0042440
pigment metabolic process
BP7.939e-02FD-GOGAT AtHBP5 ATFC-I ATGSTF12 ATFLS1 CYP75B1 ATMYB11 F3'H ATCLH1 GluTRBP ELIP
GO:0009060
aerobic respiration
BP8.053e-02ATVDAC2 AT5G55070 IDH-I ATMSD1
GO:0044282
small molecule catabolic process
BP8.287e-02CYP74B2 AT4G15940 AT1G58150 ATFC-I DPA4 AT3G52500 RPT2a ABCE1 PDLZ2 PGDH AT1G52200 ATGSTU11 ALDH5F1 AT1G64800 AT2G04400 CYP702A1
GO:0009685
gibberellin metabolic process
BP8.696e-02CP1 AT3G56350 AGL67
GO:0016101
diterpenoid metabolic process
BP8.696e-02CP1 AT3G56350 AGL67
GO:0006333
chromatin assembly or disassembly
BP8.950e-02HTA10 AT3G09480 AT3G02220 ALDH5F1 AT1G54260
GO:0006119
oxidative phosphorylation
BP8.960e-02NDHF CI76
GO:0006638
neutral lipid metabolic process
BP8.960e-02GPAT9 DGAT2
GO:0006639
acylglycerol metabolic process
BP8.960e-02GPAT9 DGAT2
GO:0006783
heme biosynthetic process
BP8.960e-02ATFC-I GluTRBP
GO:0042773
ATP synthesis coupled electron transport
BP8.960e-02NDHF CI76
GO:0043414
macromolecule methylation
BP9.113e-02KTF1 AT5G16130 AT5G15520 ACBP5 AT5G59850 AT5G58420 ATCAP-C ATHD2 ATRPA70B RUXF ATICE1 AT3G22660 AT3G09200 AT3G02220 AT2G20450 ASHH2
GO:0016114
terpenoid biosynthetic process
BP9.153e-02FD-GOGAT AtHBP5 CP1 AT3G56350 AGL67 AT1G09320 ATLUP1 HMG2 SQE2