GOID TERM ONTOLOGY pValue Genes GO:0009657 plastid organization BP 2.49869842315968e-07 ATOEP80//PSRP5//AtCEST//EMB139//emb1211//ATOBGC//AT5G11480//SMZ//AT3G49140//AT3G47650//AT3G47070//PSAE-1//emb2726//AT4G24750//EMB2369//PETC//CP33//PSBTN//MFP1//ATHM4//PSAH-2//emb2184//PSAO//RPL21C//AT1G65230//ATSIG6//AT1G02150//HMR GO:0034660 ncRNA metabolic process BP 3.46884504832299e-05 AtRPP30//AT5G50110//AtXRN2//ATOBGC//AT5G11480//AT3G56300//AT3G47650//AT3G47070//PSAE-1//emb2726//AT4G24750//EMB2369//PETC//PSBTN//MFP1//PSAH-2//emb2184//PSAO//RPL21C//AT1G65230//ATSIG6//AT1G02150//AT1G27160//AT2G43030 GO:0009658 chloroplast organization BP 0.000149456114529613 ATOEP80//AtCEST//emb1211//ATOBGC//AT5G11480//SMZ//AT3G47070//emb2726//AT4G24750//EMB2369//MFP1//emb2184//RPL21C//AT1G65230//ATSIG6//AT1G02150 GO:0010207 photosystem II assembly BP 0.000164182538571491 ATOEP80//AT5G27560//AT3G47650//PSAE-1//PETC//PSBTN//AT1G64355//PSAH-2//emb2184//PSAO//NDF1//RPL21C//PSBR//AT2G43030 GO:0015979 photosynthesis BP 0.000172733374929873 ATOEP80//AT5G19940//AT5G27560//AtCEST//AT3G47650//AT3G47070//PSAE-1//DEG5//PETC//PSAK//PSBTN//AT3G28700//AT1G64355//PSAH-2//emb2184//PSAO//PETE1//NDF1//RPL21C//AT1G65230//PSBR//AT2G43030//OTP51 GO:0019684 photosynthesis, light reaction BP 0.00029877043207652 ATOEP80//AT5G19940//AT5G27560//AtCEST//AT3G47650//PSAE-1//DEG5//PETC//PSBTN//AT1G64355//PSAH-2//emb2184//PSAO//PETE1//NDF1//RPL21C//PSBR//AT2G43030//OTP51 GO:0009668 plastid membrane organization BP 0.000485052642125152 EMB139//emb1211//ATOBGC//AT3G49140//AT3G47070//emb2726//EMB2369//CP33//MFP1//ATHM4//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0010027 thylakoid membrane organization BP 0.000485052642125152 EMB139//emb1211//ATOBGC//AT3G49140//AT3G47070//emb2726//EMB2369//CP33//MFP1//ATHM4//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0006364 rRNA processing BP 0.000730318095972314 AT5G50110//ATOBGC//AT5G11480//AT3G47650//AT3G47070//PSAE-1//AT4G24750//EMB2369//PETC//PSBTN//PSAH-2//emb2184//PSAO//RPL21C//AT1G02150//AT2G43030 GO:0016072 rRNA metabolic process BP 0.000766915751119066 AT5G50110//ATOBGC//AT5G11480//AT3G47650//AT3G47070//PSAE-1//AT4G24750//EMB2369//PETC//PSBTN//PSAH-2//emb2184//PSAO//RPL21C//AT1G02150//AT2G43030 GO:0006091 generation of precursor metabolites and ... BP 0.000966993890845829 ATOEP80//AT5G19940//AT5G27560//AtCEST//AT5G18800//AT3G47650//PSAE-1//DEG5//PETC//FdC2//PKP-ALPHA//PSBTN//AT3G28700//AT3G04050//AT1G64355//PSAH-2//AT1G08110//emb2184//PSAO//PETE1//NDF1//RPL21C//PSBR//AT2G43030//OTP51 GO:0006081 cellular aldehyde metabolic process BP 0.00112037467856511 AT2G33180//AT5G01230//AT3G49140//AT3G47650//emb2726//AT4G24750//AT4G12130//PETC//FdC2//CP33//MFP1//ATHM4//VTC4//AT1G74070//emb2184//PSAO//NDF1//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 0.00145712474763532 AT2G33180//AT3G49140//AT3G47650//emb2726//AT4G24750//PETC//FdC2//CP33//MFP1//ATHM4//AT1G74070//emb2184//PSAO//NDF1//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0034470 ncRNA processing BP 0.00177481671362339 AtRPP30//AT5G50110//ATOBGC//AT5G11480//AT3G47650//AT3G47070//PSAE-1//AT4G24750//EMB2369//PETC//PSBTN//PSAH-2//emb2184//PSAO//RPL21C//AT1G02150//AT2G43030 GO:0044272 sulfur compound biosynthetic process BP 0.00299151880153468 AT5G08430//AT5G19940//HCF164//AT5G66820//AT5G41760//ATGRXCP//ARAC3//AT4G33740//PSAE-1//PSAK//ATMDAR4//iqd9//VTC4//PSAH-2//PSAO//PETE1//AtHBP1//AT1G65230//PSBR GO:0043436 oxoacid metabolic process BP 0.00310999267911904 AT2G33180//AT4G16800//AT5G08430//AT5G19940//HCF164//AT5G66820//AT5G48220//AT5G41760//AT5G01230//AT3G56300//ATGRXCP//AT3G49140//AT3G47650//ARAC3//AT4G33740//PSAE-1//emb2726//AT4G24750//AT4G12130//EMB2369//PETC//PSAK//FdC2//CP33//PKP-ALPHA//ATMDAR4//iqd9//MFP1//PAE2//ATHM4//VTC4//AT3G04050//ATGA20OX5//PSAH-2//AT1G74070//AT1G08110//emb2184//PSAO//PETE1//AT1G21610//AtHBP1//AT1G15410//AT1G65230//ATSIG6//PSBR//AT1G02150//AT1G10310//AT1G27160//AT2G43030//CHL-CPN10 GO:0006082 organic acid metabolic process BP 0.00316471268575075 AT2G33180//AT4G16800//AT5G08430//AT5G19940//HCF164//AT5G66820//AT5G48220//AT5G41760//AT5G01230//AT3G56300//ATGRXCP//AT3G49140//AT3G47650//ARAC3//AT4G33740//PSAE-1//emb2726//AT4G24750//AT4G12130//EMB2369//PETC//PSAK//FdC2//CP33//PKP-ALPHA//ATMDAR4//iqd9//MFP1//PAE2//ATHM4//VTC4//AT3G04050//ATGA20OX5//PSAH-2//AT1G74070//AT1G08110//emb2184//PSAO//PETE1//AT1G21610//AtHBP1//AT1G15410//AT1G65230//ATSIG6//PSBR//AT1G02150//AT1G10310//AT1G27160//AT2G43030//CHL-CPN10 GO:0006790 sulfur compound metabolic process BP 0.00321474154587991 AT5G09290//AT5G08430//AT5G19940//HCF164//AT5G66820//AtNUDT11//AT5G41760//ATGRXCP//ARAC3//AT4G33740//PSAE-1//PSAK//ATMDAR4//iqd9//MFP1//VTC4//PSAH-2//PSAO//PETE1//AtHBP1//AT1G65230//PSBR GO:0022900 electron transport chain BP 0.003838311474874 AT5G18800//AT3G47650//PETC//FdC2//PSAH-2//emb2184//PETE1//NDF1 GO:0042254 ribosome biogenesis BP 0.00451907126931876 AT5G50110//ATOBGC//AT5G11480//AT3G47650//AT3G47070//PSAE-1//AT4G24750//EMB2369//PETC//AT3G12370//GHS1//PSBTN//PSAH-2//emb2184//PSAO//RPL21C//AT1G02150//AT2G43030 GO:0019288 isopentenyl diphosphate biosynthetic pro... BP 0.00455855105158705 AT3G49140//AT3G47650//emb2726//AT4G24750//FdC2//CP33//MFP1//AT1G74070//emb2184//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0009240 isopentenyl diphosphate biosynthetic pro... BP 0.00475940867668555 AT3G49140//AT3G47650//emb2726//AT4G24750//FdC2//CP33//MFP1//AT1G74070//emb2184//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0046490 isopentenyl diphosphate metabolic proces... BP 0.00475940867668555 AT3G49140//AT3G47650//emb2726//AT4G24750//FdC2//CP33//MFP1//AT1G74070//emb2184//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0022613 ribonucleoprotein complex biogenesis BP 0.00549852728447524 AT5G50110//ATOBGC//AT5G11480//AT3G47650//AT3G47070//PSAE-1//AT4G24750//EMB2369//PETC//AT3G12370//GHS1//PSBTN//PSAH-2//emb2184//PSAO//RPL21C//AT1G02150//AT2G43030 GO:0046834 lipid phosphorylation BP 0.00568603077087838 AT5G09290//AT5P1//VTC4 GO:0046854 phosphatidylinositol phosphorylation BP 0.00568603077087838 AT5G09290//AT5P1//VTC4 GO:0006073 cellular glucan metabolic process BP 0.00576897721542032 AT1G16570//AtOS9//AT5G27560//ATPDI2//AT5G54750//EXGT-A4//XTH1//XTH2//PKP-ALPHA//AtSec20//GUX1//MFP1//ATHM4//AT3G01660//AT1G65230//ARF3//AT2G04700 GO:0044042 glucan metabolic process BP 0.00576897721542032 AT1G16570//AtOS9//AT5G27560//ATPDI2//AT5G54750//EXGT-A4//XTH1//XTH2//PKP-ALPHA//AtSec20//GUX1//MFP1//ATHM4//AT3G01660//AT1G65230//ARF3//AT2G04700 GO:0010154 fruit development BP 0.00632655824699069 HAT1//ATOEP80//EMB3012//EMB139//emb1211//ATOBGC//AtYUC4//EMB2771//emb1703//GAUT3//emb2726//EMB2369//CP33//pBRP2//PKP-ALPHA//AT3G18050//emb2184//RPL21C//ATMST2//MEE11//EMB2001 GO:0030244 cellulose biosynthetic process BP 0.00855319957905447 AT1G16570//AtOS9//ATPDI2//AT5G54750//AtSec20//ARF3 GO:0019752 carboxylic acid metabolic process BP 0.00903924169842586 AT2G33180//AT4G16800//AT5G08430//AT5G19940//AT5G66820//AT5G48220//AT5G41760//AT5G01230//AT3G56300//AT3G49140//AT3G47650//ARAC3//AT4G33740//PSAE-1//emb2726//AT4G24750//AT4G12130//EMB2369//PETC//PSAK//FdC2//CP33//PKP-ALPHA//iqd9//MFP1//PAE2//ATHM4//VTC4//AT3G04050//ATGA20OX5//PSAH-2//AT1G74070//AT1G08110//emb2184//PSAO//PETE1//AT1G21610//AT1G15410//AT1G65230//ATSIG6//PSBR//AT1G02150//AT1G10310//AT1G27160//AT2G43030//CHL-CPN10 GO:0000097 sulfur amino acid biosynthetic process BP 0.00940374814629555 AT5G08430//AT5G19940//AT5G66820//AT5G41760//ARAC3//AT4G33740//PSAE-1//PSAK//iqd9//PSAH-2//PSAO//PETE1//PSBR GO:0070838 divalent metal ion transport BP 0.00942951946667175 AT5G19940//BGLU16//ATGRXCP//ATCML9//AT3G47070//ATGLTP1//PSAK//PSAO//PETE1 GO:0048316 seed development BP 0.00972348583372961 ATOEP80//EMB3012//EMB139//emb1211//ATOBGC//AtYUC4//EMB2771//emb1703//GAUT3//emb2726//EMB2369//CP33//pBRP2//PKP-ALPHA//AT3G18050//emb2184//RPL21C//ATMST2//MEE11//EMB2001 GO:0072511 divalent inorganic cation transport BP 0.00992136783795174 AT5G19940//BGLU16//ATGRXCP//ATCML9//AT3G47070//ATGLTP1//PSAK//PSAO//PETE1 GO:0030243 cellulose metabolic process BP 0.00995830662932062 AT1G16570//AtOS9//ATPDI2//AT5G54750//PKP-ALPHA//AtSec20//ARF3 GO:0051274 beta-glucan biosynthetic process BP 0.0107418889788551 AT1G16570//AtOS9//ATPDI2//AT5G54750//AtSec20//ARF3 GO:0006644 phospholipid metabolic process BP 0.011116354504882 AT5G09290//AT5G55290//AT3G49140//AT3G47650//emb2726//AT4G24750//AT5P1//FdC2//CP33//MFP1//VTC4//AT1G74070//emb2184//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0009773 photosynthetic electron transport in pho... BP 0.0116017689427279 AT3G47650//PSAH-2//emb2184//PETE1//NDF1 GO:0051273 beta-glucan metabolic process BP 0.0120112396881845 AT1G16570//AtOS9//ATPDI2//AT5G54750//PKP-ALPHA//AtSec20//ARF3 GO:0044262 cellular carbohydrate metabolic process BP 0.0132899145713239 AT1G16570//AtOS9//AT5G27560//ATSYP41//ATPDI2//GDPDL7//AT5G54750//EXGT-A4//XTH1//XTH2//AT5P1//PKP-ALPHA//AtSec20//GUX1//MFP1//ATHM4//VTC4//AT3G01660//AT1G44830//AT1G65230//ARF3//AT2G04700//AT2G27360 GO:0009790 embryo development BP 0.0133243476318595 ATOEP80//EMB3012//EMB139//emb1211//ATOBGC//AtYUC4//EMB2771//emb1703//GAUT3//emb2726//EMB2369//CP33//CHMP1B//emb2184//RPL21C//ATMST2//MEE11//EMB2001 GO:0009793 embryo development ending in seed dorman... BP 0.0147698755960246 ATOEP80//EMB3012//EMB139//emb1211//ATOBGC//AtYUC4//EMB2771//emb1703//GAUT3//emb2726//EMB2369//CP33//emb2184//RPL21C//ATMST2//MEE11//EMB2001 GO:0006098 pentose-phosphate shunt BP 0.0148923226563454 AT2G33180//AT3G47650//PETC//FdC2//MFP1//ATHM4//emb2184//PSAO//NDF1//AT1G65230 GO:0051156 glucose 6-phosphate metabolic process BP 0.0148923226563454 AT2G33180//AT3G47650//PETC//FdC2//MFP1//ATHM4//emb2184//PSAO//NDF1//AT1G65230 GO:0009767 photosynthetic electron transport chain BP 0.0152262156902976 AT3G47650//PETC//PSAH-2//emb2184//PETE1//NDF1 GO:0019725 cellular homeostasis BP 0.0153881486539379 AT5G19940//HCF164//ATPDI2//ATGRXCP//ATCML9//AT3G47070//PSAK//ATPDI4//ATHM4//PSAO//PETE1 GO:0006739 NADP metabolic process BP 0.0155222567501973 AT2G33180//AT3G47650//PETC//FdC2//MFP1//ATHM4//emb2184//PSAO//NDF1//AT1G65230 GO:0046496 nicotinamide nucleotide metabolic proces... BP 0.0175312321811623 AT2G33180//AT3G47650//PETC//FdC2//MFP1//ATHM4//emb2184//PSAO//NDF1//AT1G65230 GO:0006520 cellular amino acid metabolic process BP 0.0178123886686251 AT2G33180//AT5G08430//AT5G19940//AT5G66820//AT5G48220//AT5G41760//AT3G56300//ARAC3//AT4G33740//PSAE-1//EMB2369//PSAK//iqd9//ATHM4//PSAH-2//PSAO//PETE1//AT1G15410//PSBR//AT1G10310//AT1G27160//CHL-CPN10 GO:0019362 pyridine nucleotide metabolic process BP 0.0182417597384476 AT2G33180//AT3G47650//PETC//FdC2//MFP1//ATHM4//emb2184//PSAO//NDF1//AT1G65230 GO:0006090 pyruvate metabolic process BP 0.0182745240102008 AT3G49140//AT3G47650//emb2726//AT4G24750//FdC2//CP33//PKP-ALPHA//MFP1//AT3G04050//AT1G74070//AT1G08110//emb2184//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0009086 methionine biosynthetic process BP 0.0184645356162097 AT5G08430//AT5G66820//AT5G41760//ARAC3//AT4G33740//iqd9 GO:0016192 vesicle-mediated transport BP 0.0187545836347037 AT1G16570//AtOS9//ATSYP41//ATPDI2//AT5G54750//VPS26A//AtSec20//ATRAB7D//AT3G05000//CHMP1B//AtRABA1i//ARF3//ATRABG3B GO:0022607 cellular component assembly BP 0.0195693803757953 AT2G33180//ATOEP80//HCF164//AT5G27560//AtCEST//AT5G23910//emb1211//AT5G11480//EMB2771//AT3G47650//PSAE-1//AT4G12130//EMB2369//PETC//CP33//PSBTN//AT1G64355//PSAH-2//emb2184//PSAO//NDF1//RPL21C//PSBR//AT1G79210//AT2G43030//OTP51//HIS4//EMB2001 GO:0000096 sulfur amino acid metabolic process BP 0.019978857949084 AT5G08430//AT5G19940//AT5G66820//AT5G41760//ARAC3//AT4G33740//PSAE-1//PSAK//iqd9//PSAH-2//PSAO//PETE1//PSBR GO:0007264 small GTPase mediated signal transductio... BP 0.0202932120204489 ARAC3//ATRAB7D//AtRABA1i//ARF3//ATRABG3B GO:0006555 methionine metabolic process BP 0.0208676849027348 AT5G08430//AT5G66820//AT5G41760//ARAC3//AT4G33740//iqd9 GO:0009902 chloroplast relocation BP 0.021056158203956 AT3G47070//emb2726//MFP1//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0051667 establishment of plastid localization BP 0.021056158203956 AT3G47070//emb2726//MFP1//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0044281 small molecule metabolic process BP 0.0212774035242498 AT2G33180//AT4G16800//AT5G08430//AT5G19940//HCF164//AT1G16570//AT5G66820//ATPDI2//GDPDL7//AT5G48220//AtNUDT11//AT5G41760//AT5G18800//AT5G01230//AT3G56300//ATGRXCP//AT3G49140//AT3G47650//LBD39//ARAC3//AT4G33740//PSAE-1//emb2726//AT4G24750//AT4G12130//EMB2369//PETC//AT5P1//PSAK//FdC2//CP33//PKP-ALPHA//AT3G15140//ATMDAR4//iqd9//MFP1//PAE2//ATHM4//VTC4//AT3G04050//ATGA20OX5//PSAH-2//AT1G74070//AT1G08110//ACA7//emb2184//PSAO//PETE1//NDF1//AAE14//AT1G21610//AtHBP1//AT1G15410//AT1G28530//AT1G65230//ATSIG6//PSBR//AT1G02150//AT1G10310//AT1G27160//AT2G43030//AT2G27360//CHL-CPN10 GO:0044802 single-organism membrane organization BP 0.0214132528058826 EMB139//emb1211//ATOBGC//AT3G49140//AT3G47070//emb2726//EMB2369//PETC//CP33//MFP1//ATHM4//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0019750 chloroplast localization BP 0.0221651812653683 AT3G47070//emb2726//MFP1//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0051644 plastid localization BP 0.0221651812653683 AT3G47070//emb2726//MFP1//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0072524 pyridine-containing compound metabolic p... BP 0.0229576217701398 AT2G33180//AT3G47650//PETC//FdC2//MFP1//ATHM4//emb2184//PSAO//NDF1//AT1G65230 GO:0051656 establishment of organelle localization BP 0.0233140335115815 AT3G47070//emb2726//MFP1//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0016143 S-glycoside metabolic process BP 0.0242975366074893 AT5G19940//HCF164//ATGRXCP//ATMDAR4//MFP1//VTC4//AtHBP1//AT1G65230 GO:0019757 glycosinolate metabolic process BP 0.0242975366074893 AT5G19940//HCF164//ATGRXCP//ATMDAR4//MFP1//VTC4//AtHBP1//AT1G65230 GO:0019760 glucosinolate metabolic process BP 0.0242975366074893 AT5G19940//HCF164//ATGRXCP//ATMDAR4//MFP1//VTC4//AtHBP1//AT1G65230 GO:0061024 membrane organization BP 0.0245411101454952 EMB139//emb1211//ATOBGC//AT3G49140//AT3G47070//emb2726//EMB2369//PETC//CP33//MFP1//ATHM4//emb2184//RPL21C//AT1G65230//ATSIG6 GO:0048878 chemical homeostasis BP 0.0273869687620125 AT5G19940//EMB2771//ATGRXCP//ATCML9//AT3G47070//PSAK//PSAO//PETE1//AtG3Pp5 GO:0043623 cellular protein complex assembly BP 0.0286468027010451 ATOEP80//HCF164//AT5G27560//AtCEST//EMB2771//AT3G47650//PSAE-1//PETC//PSBTN//AT1G64355//PSAH-2//emb2184//PSAO//NDF1//RPL21C//PSBR//AT1G79210//AT2G43030//OTP51 GO:1901135 carbohydrate derivative metabolic proces... BP 0.0290214928803784 AT2G33180//AT5G19940//HCF164//ASG7//AtNUDT11//AT5G18800//ATGRXCP//AT3G49140//AT3G47650//emb2726//AT4G24750//PETC//FdC2//CP33//AT3G15140//ATMDAR4//MFP1//ATHM4//VTC4//AT1G74070//emb2184//PSAO//NDF1//AtHBP1//AT1G28530//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0016144 S-glycoside biosynthetic process BP 0.0296764485947733 AT5G19940//HCF164//ATGRXCP//ATMDAR4//VTC4//AtHBP1//AT1G65230 GO:0019758 glycosinolate biosynthetic process BP 0.0296764485947733 AT5G19940//HCF164//ATGRXCP//ATMDAR4//VTC4//AtHBP1//AT1G65230 GO:0019761 glucosinolate biosynthetic process BP 0.0296764485947733 AT5G19940//HCF164//ATGRXCP//ATMDAR4//VTC4//AtHBP1//AT1G65230 GO:0042592 homeostatic process BP 0.0302933333073724 AT5G19940//HCF164//ATPDI2//EMB2771//ATGRXCP//ATCML9//AT3G47070//PSAK//ATPDI4//ATHM4//PSAO//PETE1//AtG3Pp5 GO:0030003 cellular cation homeostasis BP 0.0310764477553712 AT5G19940//ATGRXCP//ATCML9//AT3G47070//PSAK//PSAO//PETE1 GO:0009067 aspartate family amino acid biosynthetic... BP 0.032578489094705 AT5G08430//AT5G66820//AT5G41760//ARAC3//AT4G33740//iqd9 GO:0009250 glucan biosynthetic process BP 0.0335885431973901 AT1G16570//AtOS9//AT5G27560//ATPDI2//AT5G54750//AtSec20//MFP1//ATHM4//AT3G01660//AT1G65230//ARF3//AT2G04700 GO:0008299 isoprenoid biosynthetic process BP 0.0353098208399476 AT3G49140//AT3G47650//emb2726//AT4G24750//FdC2//CP33//MFP1//ATGA20OX5//AT1G74070//emb2184//NDF1//AT1G65230//ATSIG6//AT1G02150//CPN60B//AT2G43030 GO:0048193 Golgi vesicle transport BP 0.0353141246227536 AT1G16570//AtOS9//ATSYP41//ATPDI2//AT5G54750//VPS26A//AtSec20//ARF3 GO:0006352 DNA-templated transcription, initiation BP 0.0353494740977064 AT5G08430//pBRP2//ATSIG6 GO:0006399 tRNA metabolic process BP 0.0355405860031537 AtRPP30//AT5G11480//AT3G56300//AT4G24750//EMB2369//AT1G02150//AT1G27160 GO:0006873 cellular ion homeostasis BP 0.0355405860031537 AT5G19940//ATGRXCP//ATCML9//AT3G47070//PSAK//PSAO//PETE1 GO:1901605 alpha-amino acid metabolic process BP 0.0360770021784802 AT5G08430//AT5G19940//AT5G66820//AT5G48220//AT5G41760//ARAC3//AT4G33740//PSAE-1//PSAK//iqd9//ATHM4//PSAH-2//PSAO//PETE1//PSBR//AT1G10310//CHL-CPN10 GO:0044711 single-organism biosynthetic process BP 0.036991596441175 AT2G33180//AT5G08430//AT5G19940//HCF164//PSRP5//AT1G16570//AtOS9//AT5G27560//ATSYP41//AT5G66820//ATPDI2//AT5G55290//AT5G54750//AtNUDT11//AT5G41760//EMB2771//ATGRXCP//AT3G49140//AT3G47650//GAUT3//LBD39//ARAC3//AT4G33740//AT4G30470//PSAE-1//emb2726//AT4G24750//PETC//PSAK//FdC2//CP33//PKP-ALPHA//AT3G15140//AtSec20//ATMDAR4//iqd9//GUX1//MFP1//ATHM4//VTC4//AT3G04050//AT3G01660//ATGA20OX5//PSAH-2//AT1G74070//AT1G08110//emb2184//AT1G44830//PSAO//PETE1//NDF1//AAE14//RPL21C//AtHBP1//AT1G28530//AT1G65230//ESB1//ARF3//AT2G04700//ATSIG6//PSBR//AT1G02150//CPN60B//AT2G43030//AT2G27360//CHL-CPN10//HMR GO:0050801 ion homeostasis BP 0.0381564553832039 AT5G19940//ATGRXCP//ATCML9//AT3G47070//PSAK//PSAO//PETE1//AtG3Pp5 GO:0008654 phospholipid biosynthetic process BP 0.0383523788336823 AT5G55290//AT3G49140//AT3G47650//emb2726//AT4G24750//FdC2//CP33//MFP1//AT1G74070//emb2184//AT1G65230//ATSIG6//AT1G02150//AT2G43030 GO:0055082 cellular chemical homeostasis BP 0.0404102483687695 AT5G19940//ATGRXCP//ATCML9//AT3G47070//PSAK//PSAO//PETE1 GO:0006720 isoprenoid metabolic process BP 0.0423560433367779 AT3G49140//AT3G47650//emb2726//AT4G24750//FdC2//CP33//MFP1//ATGA20OX5//AT1G74070//emb2184//NDF1//AT1G65230//ATSIG6//AT1G02150//CPN60B//AT2G43030 GO:0044264 cellular polysaccharide metabolic proces... BP 0.0468873700587602 AT1G16570//AtOS9//AT5G27560//ATSYP41//ATPDI2//AT5G54750//EXGT-A4//XTH1//XTH2//PKP-ALPHA//AtSec20//GUX1//MFP1//ATHM4//AT3G01660//AT1G65230//ARF3//AT2G04700 GO:0016070 RNA metabolic process BP 0.047041701668623 AT2G33180//HAT1//NF-YB3//AT5G08430//AT5G25470//ATOFP13//AT5G66820//AT5G62610//AtRPP30//ATOFP3//AT5G50110//AtXRN2//AT5G41760//AtMYB22//ATOBGC//AT5G11480//AT5G01230//TRM7//AT3G56300//SMZ//AT3G53820//ATMYB94//AT3G47650//AT3G47070//AT4G38900//GAUT3//ARAC3//AT4G33740//PSAE-1//emb2726//ATCBF2//AT4G24750//DEG5//AT4G08250//EMB2369//PETC//AT4G00990//AT3G12370//AT1G75150//AT3G20680//pBRP2//PSBTN//iqd9//APUM24//RPL15//MFP1//AT3G01660//PSAH-2//OTP87//AT1G74070//AT1G62410//AT1G26610//emb2184//AT1G44830//ATWRKY61//PSAO//RPL21C//RTV1//AT1G65230//ATSIG6//AT1G02150//AT1G54610//ATCDC5//AKR2B//AT1G27160//SOM//AT2G43030//OTP51//AT2G29180//AtMYB104//HMR//AtAUR3 GO:0006733 oxidoreduction coenzyme metabolic proces... BP 0.0477998719999106 AT2G33180//AT3G47650//PETC//FdC2//MFP1//ATHM4//emb2184//PSAO//NDF1//AT1G65230 GO:0045454 cell redox homeostasis BP 0.0482906707609999 HCF164//ATPDI2//ATGRXCP//ATPDI4//ATHM4 GO:0006662 glycerol ether metabolic process BP 0.0515986525615551 HCF164//ATPDI2//ATHM4 GO:0006461 protein complex assembly BP 0.0516855978665486 ATOEP80//HCF164//AT5G27560//AtCEST//AT5G23910//EMB2771//AT3G47650//PSAE-1//PETC//PSBTN//AT1G64355//PSAH-2//emb2184//PSAO//NDF1//RPL21C//PSBR//AT1G79210//AT2G43030//OTP51//HIS4 GO:0044550 secondary metabolite biosynthetic proces... BP 0.0529436772797435 AT5G19940//HCF164//ATGRXCP//AT4G30470//ATMDAR4//VTC4//AtHBP1//AT1G65230//ESB1 GO:0070271 protein complex biogenesis BP 0.0535240085646083 ATOEP80//HCF164//AT5G27560//AtCEST//AT5G23910//EMB2771//AT3G47650//PSAE-1//PETC//PSBTN//AT1G64355//PSAH-2//emb2184//PSAO//NDF1//RPL21C//PSBR//AT1G79210//AT2G43030//OTP51//HIS4 GO:0006284 base-excision repair BP 0.0536980688311507 AT5G44680//AT3G07930