GOID	TERM	ONTOLOGY	pValue	Genes
GO:0019752	carboxylic acid metabolic process	BP	3.19254455530528e-05	AT5G12410//AT4G16800//AT5G43910//AT5G23550//BCCP//ATEGY2//SBE2.2//AtLCD//AtPR2//AT3G47480//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//PKP-ALPHA//AT3G23700//ATPPC3//ACR4//PTAC13//ACP//MAP1B//PR-5//ATWHY2//AT1G35420//BBX24//ATCTL1//AT1G44920//AT2G01060//LCR67//CLPP6//AtkdsA1//NAD-ME1//AtFBA1//AT2G05830//ENOC
GO:0043436	oxoacid metabolic process	BP	4.55792147260905e-05	AT5G12410//AT4G16800//AT5G43910//AT5G23550//BCCP//ATEGY2//SBE2.2//AtLCD//AtPR2//AT3G47480//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//PKP-ALPHA//AT3G23700//ATPPC3//ACR4//PTAC13//ACP//MAP1B//PR-5//ATWHY2//AT1G35420//BBX24//FMO//ATCTL1//AT1G44920//AT2G01060//LCR67//CLPP6//AtkdsA1//NAD-ME1//AtFBA1//AT2G05830//ENOC
GO:0006082	organic acid metabolic process	BP	4.75971156395251e-05	AT5G12410//AT4G16800//AT5G43910//AT5G23550//BCCP//ATEGY2//SBE2.2//AtLCD//AtPR2//AT3G47480//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//PKP-ALPHA//AT3G23700//ATPPC3//ACR4//PTAC13//ACP//MAP1B//PR-5//ATWHY2//AT1G35420//BBX24//FMO//ATCTL1//AT1G44920//AT2G01060//LCR67//CLPP6//AtkdsA1//NAD-ME1//AtFBA1//AT2G05830//ENOC
GO:0009668	plastid membrane organization	BP	4.85347738708503e-05	Lhca5//ATTERC//ATEGY2//AT5G02710//ATH1//TROL//AtCHUP1//AT3G23700//PTAC13//AT1G44920//CLPP6//AtFBA1
GO:0010027	thylakoid membrane organization	BP	4.85347738708503e-05	Lhca5//ATTERC//ATEGY2//AT5G02710//ATH1//TROL//AtCHUP1//AT3G23700//PTAC13//AT1G44920//CLPP6//AtFBA1
GO:0044802	single-organism membrane organization	BP	0.000200540662607642	Lhca5//ATTERC//ATEGY2//AT5G02710//AtPR2//AT3G47480//ATH1//TROL//AtCHUP1//AT3G23700//PTAC13//PR-5//AT1G44920//CLPP6//AtFBA1
GO:0032787	monocarboxylic acid metabolic process	BP	0.000204533146586482	AT4G16800//AT5G43910//BCCP//ATEGY2//SBE2.2//AtLCD//AtPR2//AT3G47480//ATH1//ATSMO1-2//ATSMO1-1//TROL//PKP-ALPHA//AT3G23700//PTAC13//ACP//MAP1B//PR-5//BBX24//ATCTL1//AT1G44920//AT2G01060//CLPP6//NAD-ME1//AtFBA1//ENOC
GO:0061024	membrane organization	BP	0.000227168572632835	Lhca5//ATTERC//ATEGY2//AT5G02710//AtPR2//AT3G47480//ATH1//TROL//AtCHUP1//AT3G23700//PTAC13//PR-5//AT1G44920//CLPP6//AtFBA1
GO:0006090	pyruvate metabolic process	BP	0.000381044800881468	ATEGY2//SBE2.2//AtLCD//ATH1//TROL//PKP-ALPHA//AT3G23700//PTAC13//BBX24//ATCTL1//AT1G44920//CLPP6//NAD-ME1//AtFBA1//ENOC
GO:0016053	organic acid biosynthetic process	BP	0.000570108612127775	AT5G12410//AT5G43910//AT5G23550//BCCP//AtPR2//AT3G47480//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//ACP//PR-5//ATWHY2//AT1G35420//ATCTL1//LCR67//CLPP6//AtkdsA1//AtFBA1//AT2G05830
GO:0046394	carboxylic acid biosynthetic process	BP	0.000570108612127775	AT5G12410//AT5G43910//AT5G23550//BCCP//AtPR2//AT3G47480//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//ACP//PR-5//ATWHY2//AT1G35420//ATCTL1//LCR67//CLPP6//AtkdsA1//AtFBA1//AT2G05830
GO:0042793	transcription from plastid promoter	BP	0.00104691716301917	ATTERC//AT4G26370//AtCHUP1//AT3G23700//PTAC13//CLPP6
GO:0044283	small molecule biosynthetic process	BP	0.00114469509402017	AT5G12410//AT5G43910//AT5G23550//BCCP//PROPEP5//AtPR2//AT3G47480//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//PKP-ALPHA//ACP//PR-5//ATWHY2//AT1G35420//ATCTL1//LCR67//CLPP6//AtkdsA1//AtFBA1//ATCB5LP//AT2G05830//AT2G18770
GO:0000096	sulfur amino acid metabolic process	BP	0.001410558845781	AT5G12410//AT5G23550//AtLCD//ATH1//PSAE-1//ATSMO1-2//ATSMO1-1//TROL//ATWHY2//AT1G35420//ATCTL1//AtFBA1//AT2G05830
GO:0009902	chloroplast relocation	BP	0.00152931701120417	ATTERC//TROL//AtCHUP1//AT3G23700//PTAC13//CLPP6//AtFBA1
GO:0051667	establishment of plastid localization	BP	0.00152931701120417	ATTERC//TROL//AtCHUP1//AT3G23700//PTAC13//CLPP6//AtFBA1
GO:0019750	chloroplast localization	BP	0.00163592466434976	ATTERC//TROL//AtCHUP1//AT3G23700//PTAC13//CLPP6//AtFBA1
GO:0051644	plastid localization	BP	0.00163592466434976	ATTERC//TROL//AtCHUP1//AT3G23700//PTAC13//CLPP6//AtFBA1
GO:0051656	establishment of organelle localization	BP	0.00163592466434976	ATTERC//TROL//AtCHUP1//AT3G23700//PTAC13//CLPP6//AtFBA1
GO:0002679	respiratory burst involved in defense re...	BP	0.0018898243540821	AtPR2//AT3G47480//PR-5
GO:0045730	respiratory burst	BP	0.0018898243540821	AtPR2//AT3G47480//PR-5
GO:0009657	plastid organization	BP	0.00205996409081059	Lhca5//ATTERC//ATEGY2//AT5G02710//ATH1//PSAE-1//AT4G26370//TROL//AtCHUP1//AT3G23700//PTAC13//AT1G44920//CLPP6//AtFBA1
GO:0009696	salicylic acid metabolic process	BP	0.0021970460677475	AT5G43910//AtPR2//AT3G47480//TROL//PR-5//ATCTL1
GO:0044281	small molecule metabolic process	BP	0.00237919080613206	AT5G12410//AT4G16800//AT5G43910//AT5G23550//BCCP//PROPEP5//ATEGY2//SBE2.2//AtLCD//AtPR2//AT3G47480//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//ATNSI//PSP//PKP-ALPHA//AT3G23700//ATPPC3//ACR4//AT3G02650//PTAC13//ACP//MAP1B//PR-5//ATWHY2//AT1G35420//BBX24//FMO//ATCTL1//AT1G44920//AT2G01060//LCR67//CLPP6//AtkdsA1//NAD-ME1//AtFBA1//ATCB5LP//AT2G05830//AT2G18770//ENOC
GO:0008652	cellular amino acid biosynthetic process	BP	0.00284263741867064	AT5G12410//AT5G23550//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//ATWHY2//AT1G35420//ATCTL1//CLPP6//AtFBA1//AT2G05830
GO:0046520	sphingoid biosynthetic process	BP	0.00292020567991987	ATSMO1-2//ATSMO1-1//AT2G18770
GO:0042537	benzene-containing compound metabolic pr...	BP	0.00315088081472437	AT5G43910//AtPR2//AT3G47480//TROL//PR-5//ATCTL1
GO:0018958	phenol-containing compound metabolic pro...	BP	0.00337379659572556	AT5G43910//AtPR2//AT3G47480//TROL//PR-5//ATCTL1
GO:0010565	regulation of cellular ketone metabolic ...	BP	0.00354219431468625	ATH1//ACR4//ATCTL1
GO:0030148	sphingolipid biosynthetic process	BP	0.00354219431468625	ATSMO1-2//ATSMO1-1//AT2G18770
GO:0046519	sphingoid metabolic process	BP	0.00354219431468625	ATSMO1-2//ATSMO1-1//AT2G18770
GO:0006633	fatty acid biosynthetic process	BP	0.00382404491326161	BCCP//ATH1//ATSMO1-2//ATSMO1-1//TROL//ACP//AtFBA1
GO:0009595	detection of biotic stimulus	BP	0.00434265367289727	AtPR2//AT3G47480//TROL//PR-5
GO:0051606	detection of stimulus	BP	0.00450486831044542	AtPR2//AT3G47480//TROL//PR-5//FHY2
GO:0009086	methionine biosynthetic process	BP	0.00527769926890215	AT5G12410//AT5G23550//ATSMO1-2//ATSMO1-1//ATWHY2//AT2G05830
GO:0006091	generation of precursor metabolites and ...	BP	0.0054538568360036	Lhca5//AT5G03880//PSAE-1//PPH1//TROL//AtCHUP1//PKP-ALPHA//AT3G23700//ATPPC3//BBX24//ATCTL1//HCS2//CLPP6//NAD-ME1//AtFBA1//ENOC
GO:0006470	protein dephosphorylation	BP	0.00552634748078009	AT5G03880//PPH1//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1
GO:0035304	regulation of protein dephosphorylation	BP	0.00560310443345792	AT5G03880//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1
GO:0000097	sulfur amino acid biosynthetic process	BP	0.00575300635129772	AT5G12410//AT5G23550//PSAE-1//ATSMO1-2//ATSMO1-1//TROL//ATWHY2//AT1G35420//ATCTL1//AtFBA1//AT2G05830
GO:1901617	organic hydroxy compound biosynthetic pr...	BP	0.00579582147777305	AT5G43910//BCCP//PROPEP5//AtPR2//AT3G47480//ATSMO1-2//ATSMO1-1//TROL//PKP-ALPHA//PR-5//ATCB5LP//AT2G18770
GO:0006555	methionine metabolic process	BP	0.00594295463924355	AT5G12410//AT5G23550//ATSMO1-2//ATSMO1-1//ATWHY2//AT2G05830
GO:0035303	regulation of dephosphorylation	BP	0.0062976128011268	AT5G03880//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1
GO:0051640	organelle localization	BP	0.00672453525522659	ATTERC//TROL//AtCHUP1//AT3G23700//PTAC13//CLPP6//AtFBA1
GO:0009071	serine family amino acid catabolic proce...	BP	0.00713468145560731	AtLCD//ATH1//TROL//AtFBA1
GO:0009697	salicylic acid biosynthetic process	BP	0.00750216786022759	AT5G43910//AtPR2//AT3G47480//TROL//PR-5
GO:0006790	sulfur compound metabolic process	BP	0.0078812860570932	AT5G12410//AT5G23550//BCCP//SBE2.2//AtLCD//ATH1//PSAE-1//ATSMO1-2//ATSMO1-1//TROL//ATWHY2//AT1G35420//FMO//ATCTL1//AtFBA1//AT2G05830
GO:0006520	cellular amino acid metabolic process	BP	0.008427798663408	AT5G12410//AT5G23550//AtLCD//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//ACR4//ATWHY2//AT1G35420//ATCTL1//CLPP6//AtFBA1//AT2G05830
GO:0016126	sterol biosynthetic process	BP	0.00875671586113641	BCCP//ATSMO1-2//ATSMO1-1//PKP-ALPHA//ATCB5LP//AT2G18770
GO:0009640	photomorphogenesis	BP	0.00887075008989734	AT5G12410//MSI3//ATH1//AT3G02650//BBX24//FHY2//ARPN
GO:0016311	dephosphorylation	BP	0.00887075008989734	AT5G03880//PPH1//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1
GO:0019288	isopentenyl diphosphate biosynthetic pro...	BP	0.00912510552641801	ATEGY2//SBE2.2//ATH1//TROL//AT3G23700//PTAC13//AT1G44920//CLPP6//AtFBA1
GO:0016125	sterol metabolic process	BP	0.00922508932900279	BCCP//ATSMO1-2//ATSMO1-1//PKP-ALPHA//ATCB5LP//AT2G18770
GO:1901615	organic hydroxy compound metabolic proce...	BP	0.00933199697058417	AT5G43910//BCCP//PROPEP5//AtPR2//AT3G47480//ATSMO1-2//ATSMO1-1//TROL//PKP-ALPHA//MAP1B//PR-5//ATCTL1//ATCB5LP//AT2G18770
GO:1901701	cellular response to oxygen-containing c...	BP	0.00938161760166803	AT5G12410//AHK5//OCP3//AtPR2//AT3G47480//MSI3//TROL//BSK3//PR-5//LCR67//AT2G05830//ARPN
GO:0072330	monocarboxylic acid biosynthetic process	BP	0.00965202310298807	AT5G43910//BCCP//AtPR2//AT3G47480//ATH1//ATSMO1-2//ATSMO1-1//TROL//ACP//PR-5//AtFBA1
GO:0009067	aspartate family amino acid biosynthetic...	BP	0.00971112243956941	AT5G12410//AT5G23550//ATSMO1-2//ATSMO1-1//ATWHY2//AT2G05830
GO:0009240	isopentenyl diphosphate biosynthetic pro...	BP	0.00977630096774601	ATEGY2//SBE2.2//ATH1//TROL//AT3G23700//PTAC13//AT1G44920//CLPP6//AtFBA1
GO:0046490	isopentenyl diphosphate metabolic proces...	BP	0.00977630096774601	ATEGY2//SBE2.2//ATH1//TROL//AT3G23700//PTAC13//AT1G44920//CLPP6//AtFBA1
GO:0008610	lipid biosynthetic process	BP	0.00993052863851404	AT5G23550//BCCP//ATEGY2//SBE2.2//ATH1//ATSMO1-2//ATSMO1-1//TROL//PKP-ALPHA//AT3G23700//PTAC13//ACP//AT1G44920//LCR67//CLPP6//AtkdsA1//AtFBA1//ATCB5LP//AT2G18770
GO:0046189	phenol-containing compound biosynthetic ...	BP	0.010348320693886	AT5G43910//AtPR2//AT3G47480//TROL//PR-5
GO:0016556	mRNA modification	BP	0.0123709353372445	AT5G38290//AT5G02710//ATH1//EPFL9//MEF22
GO:0009069	serine family amino acid metabolic proce...	BP	0.0127377398860528	AtLCD//ATH1//PSAE-1//ATSMO1-2//TROL//PSP//AT1G35420//ATCTL1//AtFBA1
GO:0006779	porphyrin-containing compound biosynthet...	BP	0.0130173232832235	AT5G38290//ATH1//TROL//PRPS20//AT3G23700//AtFBA1
GO:0042743	hydrogen peroxide metabolic process	BP	0.0140521821778856	AT4G16155//AtPR2//AT3G47480//TROL//PR-5//AtFBA1//OTS1
GO:1901607	alpha-amino acid biosynthetic process	BP	0.0141532228203801	AT5G12410//AT5G23550//PSAE-1//ATSMO1-2//ATSMO1-1//TROL//PSP//ATWHY2//AT1G35420//ATCTL1//AtFBA1//AT2G05830
GO:0033014	tetrapyrrole biosynthetic process	BP	0.0142759510249049	AT5G38290//ATH1//TROL//PRPS20//AT3G23700//AtFBA1
GO:0000394	RNA splicing, via endonucleolytic cleava...	BP	0.0149360714109034	AT5G12410//AT5G23550//ATSMO1-2//ATSMO1-1//ATWHY2//AT2G05830
GO:0009066	aspartate family amino acid metabolic pr...	BP	0.0149360714109034	AT5G12410//AT5G23550//ATSMO1-2//ATSMO1-1//ATWHY2//AT2G05830
GO:0009314	response to radiation	BP	0.015136264011009	AT5G12410//AHK5//AT5G66180//BCCP//TRFL10//MSI3//ATH1//TROL//AT3G06210//AT3G02650//DRT102//AT1G56345//PR-5//BBX24//ATCTL1//AT1G48550//PRIN2//AtFBA1//FHY2//ARPN
GO:1901698	response to nitrogen compound	BP	0.015550285313101	AHK5//AtPR2//AT3G47480//TROL//ATPPC3//ACP//PR-5//ATCTL1//AtBOR1//AT2G05830
GO:0044272	sulfur compound biosynthetic process	BP	0.0166474059065305	AT5G12410//AT5G23550//ATH1//PSAE-1//ATSMO1-2//ATSMO1-1//TROL//ATWHY2//AT1G35420//FMO//ATCTL1//AtFBA1//AT2G05830
GO:0006631	fatty acid metabolic process	BP	0.01681766363753	AT4G16800//BCCP//ATH1//ATSMO1-2//ATSMO1-1//TROL//ACP//AT2G01060//AtFBA1
GO:0006096	glycolytic process	BP	0.0170433604747089	PKP-ALPHA//BBX24//ATCTL1//NAD-ME1//AtFBA1//ENOC
GO:0009416	response to light stimulus	BP	0.017194402889424	AT5G12410//AHK5//AT5G66180//BCCP//MSI3//ATH1//TROL//AT3G06210//AT3G02650//DRT102//AT1G56345//PR-5//BBX24//ATCTL1//AT1G48550//PRIN2//AtFBA1//FHY2//ARPN
GO:1901605	alpha-amino acid metabolic process	BP	0.0173962605272081	AT5G12410//AT5G23550//AtLCD//ATH1//PSAE-1//ATSMO1-2//ATSMO1-1//TROL//PSP//ATWHY2//AT1G35420//ATCTL1//AtFBA1//AT2G05830
GO:0006665	sphingolipid metabolic process	BP	0.017421792467311	ATSMO1-2//ATSMO1-1//AT2G18770
GO:0009106	lipoate metabolic process	BP	0.017421792467311	ATH1//TROL//AtFBA1
GO:0046148	pigment biosynthetic process	BP	0.0178279598154317	AT5G38290//AtPR2//ATH1//TROL//PRPS20//AT3G23700//PR-5//AtFBA1
GO:0045489	pectin biosynthetic process	BP	0.0190998567560422	AtkdsA1//ARAD1
GO:0043069	negative regulation of programmed cell d...	BP	0.0191549048008054	AtPR2//AT3G47480//PR-5
GO:1901566	organonitrogen compound biosynthetic pro...	BP	0.0196011087483493	AT5G12410//AT5G38290//AT5G23550//ATH1//PSAE-1//AT4G26370//ATSMO1-2//ATSMO1-1//TROL//PSP//PRPS20//AT3G23700//AT3G02650//ATWHY2//AT1G35420//ATCTL1//CLPP6//AtFBA1//AT2G05830//AT2G18770
GO:0060548	negative regulation of cell death	BP	0.0228973492376092	AtPR2//AT3G47480//PR-5
GO:0006694	steroid biosynthetic process	BP	0.023644543405903	BCCP//ATSMO1-2//ATSMO1-1//PKP-ALPHA//ATCB5LP//AT2G18770
GO:0034976	response to endoplasmic reticulum stress	BP	0.0253437661966175	AtPR2//AT3G47480//AT1G56345//PR-5//AT1G61770
GO:0031399	regulation of protein modification proce...	BP	0.0265086913007884	AT5G03880//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1
GO:0042742	defense response to bacterium	BP	0.0267123868925079	PSL5//AtPR2//AT3G47480//TROL//AT3G23700//PR-5//ATCTL1
GO:0008654	phospholipid biosynthetic process	BP	0.0267707001768101	AT5G23550//ATEGY2//SBE2.2//ATH1//TROL//AT3G23700//PTAC13//AT1G44920//CLPP6//AtFBA1
GO:0044724	single-organism carbohydrate catabolic p...	BP	0.0275878634833845	PKP-ALPHA//BBX24//ATCTL1//NAD-ME1//AtFBA1//XK-1//ENOC
GO:0015995	chlorophyll biosynthetic process	BP	0.0277121622111647	ATH1//TROL//PRPS20//AT3G23700//AtFBA1
GO:0009639	response to red or far red light	BP	0.0277291962433706	AT5G12410//MSI3//ATH1//TROL//AT3G02650//BBX24//AtFBA1//FHY2//ARPN
GO:0032268	regulation of cellular protein metabolic...	BP	0.0284826987219012	AT5G03880//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1//FHY2
GO:0019220	regulation of phosphate metabolic proces...	BP	0.0285411296255815	AT5G03880//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1
GO:0051174	regulation of phosphorus metabolic proce...	BP	0.0285411296255815	AT5G03880//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1
GO:0044255	cellular lipid metabolic process	BP	0.028945716843719	AT4G16800//AT5G23550//BCCP//ATEGY2//SBE2.2//ATH1//ATSMO1-2//ATSMO1-1//TROL//AT3G23700//PTAC13//ACP//AT1G44920//AT2G01060//LCR67//CLPP6//AtkdsA1//AtFBA1//AT2G18770
GO:0010310	regulation of hydrogen peroxide metaboli...	BP	0.0291456620912392	AtPR2//AT3G47480//TROL//PR-5
GO:0072593	reactive oxygen species metabolic proces...	BP	0.0293970591692576	AT4G16155//AtPR2//AT3G47480//TROL//PR-5//AtFBA1//OTS1
GO:0019682	glyceraldehyde-3-phosphate metabolic pro...	BP	0.0294361325165404	ATEGY2//SBE2.2//ATH1//TROL//ATNSI//AT3G23700//PTAC13//AT1G44920//CLPP6//AtFBA1
GO:0008202	steroid metabolic process	BP	0.0306739759241996	BCCP//ATSMO1-2//ATSMO1-1//PKP-ALPHA//ATCB5LP//AT2G18770
GO:0051246	regulation of protein metabolic process	BP	0.0312850016225048	AT5G03880//TROL//AtCHUP1//PR-5//CLPP6//AtFBA1//FHY2
GO:0006534	cysteine metabolic process	BP	0.0322588962245038	AtLCD//PSAE-1//ATSMO1-2//TROL//AT1G35420//ATCTL1//AtFBA1