GOID TERM ONTOLOGY pValue Genes GO:0010440 stomatal lineage progression BP 0.00132926788693756 CDC2//pBRP2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0006863 purine nucleobase transport BP 0.00464704203358546 ARR18//ATGPT1//AtRLP55//FLA21//AT3G24060//AT1G76530//AT2G05600//AT2G29370 GO:0015851 nucleobase transport BP 0.00464704203358546 ARR18//ATGPT1//AtRLP55//FLA21//AT3G24060//AT1G76530//AT2G05600//AT2G29370 GO:0000079 regulation of cyclin-dependent protein s... BP 0.00615263587742764 CDC2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0008284 positive regulation of cell proliferatio... BP 0.00638466748739992 WOX2//CDC2//FUS3 GO:0051726 regulation of cell cycle BP 0.0110382291940069 AT5G01910//CDC2//AT3G20150//TCTP//AT1G10780//CYCB2;1//CKS1//ATCYCD1;1//AJH1//CYCB1;4 GO:0065009 regulation of molecular function BP 0.0119501183993487 AHL22//AtI-2//ZPR3//CDC2//AT3G45220//AT4G01610//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0019375 galactolipid biosynthetic process BP 0.0175464877726924 AT4G17650//ATWRKY75//AT1G19200//ATACP5//AT2G02870 GO:0071900 regulation of protein serine/threonine k... BP 0.0175464877726924 CDC2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0019374 galactolipid metabolic process BP 0.018773526860619 AT4G17650//ATWRKY75//AT1G19200//ATACP5//AT2G02870 GO:0016036 cellular response to phosphate starvatio... BP 0.0192374889143528 AT4G17650//ATWRKY75//AT1G19200//AT3G29060//ATACP5//AT2G02870 GO:0043549 regulation of kinase activity BP 0.0200557452376491 CDC2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0045859 regulation of protein kinase activity BP 0.0200557452376491 CDC2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0045736 negative regulation of cyclin-dependent ... BP 0.0213074158428605 CDC2//CKS1//ATCYCD1;1 GO:0051338 regulation of transferase activity BP 0.0213939993002874 CDC2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0048869 cellular developmental process BP 0.0227532837448738 MEE48//AT5G19800//AT5G63990//ANAC101//WOX2//UBC30//ATNAS2//ATRAB1A//ATGSL09//AIL6//AT5G07420//CDC2//AT3G46480//ATSYP72//AT4G08670//ASAR1//AT4G01610//FAR2//pBRP2//TCTP//AT3G07900//AT3G07830//MANIB//CYCB2;1//ATRAB-H1D//AGL61//CKS1//ATEXPB2//ATCYCD1;1//AT2G39430//AT2G34910//CYCB1;4 GO:0001932 regulation of protein phosphorylation BP 0.0227891013366693 CDC2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0023051 regulation of signaling BP 0.0241909233022658 ATGID1C//AtI-2//ATICMTA//ATVPS29//SRS2//ABCB10//ATERF3 GO:0050790 regulation of catalytic activity BP 0.0254205278402022 AtI-2//CDC2//AT3G45220//AT4G01610//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0042325 regulation of phosphorylation BP 0.0257528738130633 CDC2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0009723 response to ethylene BP 0.0262475018051443 ATMYB12//RAP2.11//ATWRKY75//AT5G27760//ATGID1C//ATNAS2//KNAT5//AT4G18450//ATERF1//AOX1D//ATERF3//ATMBF1A GO:0071248 cellular response to metal ion BP 0.0266350627020279 RAP2.11//ATNAS2//ACS9 GO:0009267 cellular response to starvation BP 0.0344276948075395 AT4G17650//ATWRKY75//CDC2//AT3G45710//AT1G19200//AT3G29060//ATACP5//AT1G09740//AT2G39110//AT2G02870 GO:0010374 stomatal complex development BP 0.0352032329273802 CDC2//AT4G22490//pBRP2//CYCB2;1//CKS1//ATCYCD1;1//CYCB1;4 GO:0009247 glycolipid biosynthetic process BP 0.0360788930933574 AT4G17650//ATWRKY75//AT1G19200//ATACP5//AT2G02870 GO:0048441 petal development BP 0.0360788930933574 AT5G01910//AT3G28560//AT1G64450//AT2G04220//AGO5 GO:0048465 corolla development BP 0.0360788930933574 AT5G01910//AT3G28560//AT1G64450//AT2G04220//AGO5 GO:0044036 cell wall macromolecule metabolic proces... BP 0.0381397022832545 AT2G41610//ANAC101//AIL6//SIS3//AT3G45710//AT4G27435//AT3G20150//AT1G72220//ABCG35 GO:0031668 cellular response to extracellular stimu... BP 0.0395756972488839 AT4G17650//ATWRKY75//CDC2//AT3G45710//AT1G19200//AT3G29060//ATACP5//UGT74E2//AT1G09740//AT2G39110//AT2G02870 GO:0071496 cellular response to external stimulus BP 0.0395756972488839 AT4G17650//ATWRKY75//CDC2//AT3G45710//AT1G19200//AT3G29060//ATACP5//UGT74E2//AT1G09740//AT2G39110//AT2G02870 GO:0042594 response to starvation BP 0.0409159737333304 AT4G17650//ATWRKY75//CDC2//AT3G45710//AT1G19200//AT3G29060//ATACP5//AT1G09740//AT2G39110//AT2G02870 GO:0071241 cellular response to inorganic substance BP 0.0427558995071748 RAP2.11//ATNAS2//ACS9 GO:0009798 axis specification BP 0.0438943296464649 WOX2//AIL6//ZPR3//SRS2 GO:0009937 regulation of gibberellic acid mediated ... BP 0.0439800148201781 ATGID1C//SRS2 GO:0031669 cellular response to nutrient levels BP 0.0444555928303694 AT4G17650//ATWRKY75//CDC2//AT3G45710//AT1G19200//AT3G29060//ATACP5//AT1G09740//AT2G39110//AT2G02870 GO:0009312 oligosaccharide biosynthetic process BP 0.0464499178019979 ATGID1C//TPPI//AT4G10260 GO:0042631 cellular response to water deprivation BP 0.0466113798917755 AT4G17650//ATWRKY75//UGT74E2//AT2G02870 GO:0071462 cellular response to water stimulus BP 0.0466113798917755 AT4G17650//ATWRKY75//UGT74E2//AT2G02870 GO:0006664 glycolipid metabolic process BP 0.0486351456332982 AT4G17650//ATWRKY75//AT1G19200//ATACP5//AT2G02870 GO:0007049 cell cycle BP 0.0498332530579948 UBC30//ATGSL09//AT5G01910//AT3G61340//CDC2//ATMLH3//FAR2//AT3G20150//TCTP//AT1G10780//CYCB2;1//CKS1//ATCYCD1;1//AJH1//SGD9//CYCB1;4 GO:0051336 regulation of hydrolase activity BP 0.050442095124601 AtI-2//AT3G45220 GO:0009991 response to extracellular stimulus BP 0.0522378768183592 AT4G17650//ATWRKY75//CDC2//AT3G45710//AT1G19200//AT3G29060//ATACP5//UGT74E2//AT1G09740//AT2G39110//AT2G02870 GO:0048446 petal morphogenesis BP 0.0523198582242016 AT5G01910//AT3G28560//AT1G64450//AT2G04220 GO:0032269 negative regulation of cellular protein ... BP 0.0553106519478504 CDC2//AT3G45220//CKS1//ATCYCD1;1 GO:0051248 negative regulation of protein metabolic... BP 0.0553106519478504 CDC2//AT3G45220//CKS1//ATCYCD1;1 GO:0009735 response to cytokinin BP 0.0557675751175126 AT5G63990//ANAC101//ARR18//ARR22//MANIB GO:1903509 liposaccharide metabolic process BP 0.0557675751175126 AT4G17650//ATWRKY75//AT1G19200//ATACP5//AT2G02870 GO:0060255 regulation of macromolecule metabolic pr... BP 0.0561453642454158 AT-HSFB3//ATMYB12//KNAT4//ATWRKY75//AtMYB9//AT5G66940//ANAC101//ARR18//AtMYB115//AT5G23650//AtTLP11//AIL6//AT5G01910//ZPR3//ACS9//CDC2//ATSMC2//AT3G45220//ATMLH3//KNAT5//AT4G18870//AT4G18450//NGA4//ANAC041//AT1G19200//AT3G28230//AT3G32090//pBRP2//AT3G20150//NF-YB5//AT2G31420//DEL3//ATERF1//ATACP5//FUS3//ARR22//WOX11//ATWRKY61//ATERF3//AT1G10780//ANAC020//CYCB2;1//ATMBF1A//CKS1//ATCYCD1;1//SGD9//ATZFP10//AT2G33720//AtRLP23//CYCB1;4 GO:0018871 1-aminocyclopropane-1-carboxylate metabo... BP 0.0572201609149397 ACS9//AT4G28420 GO:0042218 1-aminocyclopropane-1-carboxylate biosyn... BP 0.0572201609149397 ACS9//AT4G28420 GO:0048528 post-embryonic root development BP 0.0582721600678245 RAP2.11//ATWRKY75//ATDGK2//TCTP//ACH2 GO:0045786 negative regulation of cell cycle BP 0.0584354416618445 CDC2//CKS1//ATCYCD1;1 GO:0009653 anatomical structure morphogenesis BP 0.0587428590253413 MEE48//AT5G19800//ATGID1C//AT5G63990//ANAC101//WOX2//UBC30//ATNAS2//ATRAB1A//AIL6//AT5G07420//AT5G01910//ZPR3//ATSYP72//SRS2//AT4G22490//AT4G08670//ASAR1//AT4G01610//FAR2//pBRP2//AT3G28560//TCTP//AT3G07900//AT3G07830//MANIB//AT1G01640//AT1G64450//UGT74E2//AT2G04220//ATRAB-H1D//ATEXPB2//AJH1//AT2G39430//AT2G34910 GO:0031667 response to nutrient levels BP 0.0591949109379285 AT4G17650//ATWRKY75//CDC2//AT3G45710//AT1G19200//AT3G29060//ATACP5//AT1G09740//AT2G39110//AT2G02870 GO:0008283 cell proliferation BP 0.0620583248771768 WOX2//CDC2//AT3G20150//FUS3//TCTP//AT1G10780//CYCB2;1 GO:0071901 negative regulation of protein serine/th... BP 0.0627233135101858 CDC2//CKS1//ATCYCD1;1 GO:0009966 regulation of signal transduction BP 0.0638801527511505 ATGID1C//AtI-2//ATICMTA//SRS2//ABCB10//ATERF3 GO:0019220 regulation of phosphate metabolic proces... BP 0.0640619544026366 AtI-2//CDC2//CYCB2;1//CKS1//ATCYCD1;1//AtRLP23//CYCB1;4 GO:0051174 regulation of phosphorus metabolic proce... BP 0.0640619544026366 AtI-2//CDC2//CYCB2;1//CKS1//ATCYCD1;1//AtRLP23//CYCB1;4 GO:0044092 negative regulation of molecular functio... BP 0.0661663605175291 ZPR3//CDC2//AT3G45220//CKS1//ATCYCD1;1 GO:0048646 anatomical structure formation involved ... BP 0.0671002399917816 MEE48//WOX2//AT5G01910//AT4G08670//FAR2//pBRP2//AT3G28560//AT1G64450//AJH1 GO:0006469 negative regulation of protein kinase ac... BP 0.0671528763435702 CDC2//CKS1//ATCYCD1;1 GO:0033673 negative regulation of kinase activity BP 0.0671528763435702 CDC2//CKS1//ATCYCD1;1 GO:0051348 negative regulation of transferase activ... BP 0.0671528763435702 CDC2//CKS1//ATCYCD1;1 GO:0006260 DNA replication BP 0.0688336169592622 UBC30//AT5G01910//CDC2//AT3G20150//DEL3//AT1G10780//CYCB2;1//CKS1//ATCYCD1;1 GO:0046164 alcohol catabolic process BP 0.0716417692261255 ATSAC1B//ASAT1 GO:0001933 negative regulation of protein phosphory... BP 0.0717211118582426 CDC2//CKS1//ATCYCD1;1 GO:0042326 negative regulation of phosphorylation BP 0.0717211118582426 CDC2//CKS1//ATCYCD1;1 GO:0010646 regulation of cell communication BP 0.0734182944146117 ATGID1C//AtI-2//ATICMTA//SRS2//ABCB10//ATERF3 GO:0010208 pollen wall assembly BP 0.0764248731241055 MEE48//AT4G08670//FAR2 GO:0010563 negative regulation of phosphorus metabo... BP 0.0764248731241055 CDC2//CKS1//ATCYCD1;1 GO:0010584 pollen exine formation BP 0.0764248731241055 MEE48//AT4G08670//FAR2 GO:0010927 cellular component assembly involved in ... BP 0.0764248731241055 MEE48//AT4G08670//FAR2 GO:0031400 negative regulation of protein modificat... BP 0.0764248731241055 CDC2//CKS1//ATCYCD1;1 GO:0045936 negative regulation of phosphate metabol... BP 0.0764248731241055 CDC2//CKS1//ATCYCD1;1 GO:0085029 extracellular matrix assembly BP 0.0764248731241055 MEE48//AT4G08670//FAR2 GO:0090558 plant epidermis development BP 0.0770295770714955 AT5G19800//AT5G63990//ANAC101//CDC2//AT4G22490//pBRP2//TCTP//AT3G07900//MANIB//CYCB2;1//CKS1//ATCYCD1;1//AT2G39430//AT2G34910//CYCB1;4 GO:0010413 glucuronoxylan metabolic process BP 0.077572968380432 AT2G41610//SIS3//AT3G45710//AT4G27435//AT1G72220 GO:0045492 xylan biosynthetic process BP 0.077572968380432 AT2G41610//SIS3//AT3G45710//AT4G27435//AT1G72220 GO:0044767 single-organism developmental process BP 0.0779556181894384 AHL22//AT4G17280//MEE48//KNAT4//RAP2.11//AT5G19800//ATWRKY75//EIF2//ATGID1C//AT5G63990//ATDGK2//ANAC101//WOX2//TET15//UBC30//ATNAS2//ATGPT1//AT5G53100//ATRAB1A//ATGSL09//ATICMTA//AIL6//AT5G07420//AT5G01910//AT3G55890//ZPR3//CDC2//AT3G46480//ATSYP72//KAI2//SRS2//KNAT5//AT4G22490//AT4G08670//ASAR1//NGA4//AT4G01610//ANAC041//ATWI-12//FAR2//pBRP2//AT3G28560//AT3G25290//FUS3//TCTP//AT3G07900//AT3G07830//MANIB//ACH2//AT1G48550//AT1G01640//ABCB10//AT1G64450//ANAC020//CYCB2;1//UGT74E2//AT2G04220//ATRAB-H1D//AGL61//AGO5//CKS1//ATEXPB2//ATCYCD1;1//AJH1//SGD9//AT2G39430//AT2G34910//CYCB1;4 GO:0000338 protein deneddylation BP 0.081260898194516 EIF2//AJH1//SGD9 GO:0010388 cullin deneddylation BP 0.081260898194516 EIF2//AJH1//SGD9 GO:0045491 xylan metabolic process BP 0.0836487955865959 AT2G41610//SIS3//AT3G45710//AT4G27435//AT1G72220 GO:0007346 regulation of mitotic cell cycle BP 0.0862175287474038 AT5G01910//TCTP//AT1G10780//AJH1 GO:1901616 organic hydroxy compound catabolic proce... BP 0.0870883751490812 ATSAC1B//ASAT1 GO:0032501 multicellular organismal process BP 0.0873969300967454 AHL22//AT4G17280//MEE48//KNAT4//RAP2.11//AT5G19800//ATWRKY75//EIF2//ATGID1C//AT5G63990//ATDGK2//ANAC101//WOX2//ATNAS2//ATGPT1//AT5G53100//ATRAB1A//ATGSL09//ATICMTA//AIL6//AT5G07420//AT5G01910//AT3G55890//ZPR3//CDC2//ATSYP72//KAI2//SRS2//ATMLH3//KNAT5//AT4G22490//AT4G08670//NGA4//AT4G01610//ANAC041//FAR2//pBRP2//AT3G28560//AT3G25290//FUS3//TCTP//AT3G07900//AT3G07830//MANIB//ACH2//AOX1D//AT1G48550//AT1G01640//ABCB10//AT1G64450//ANAC020//CYCB2;1//UGT74E2//AT2G04220//ATRAB-H1D//AGL61//AGO5//CKS1//ATCYCD1;1//AJH1//SGD9//AT2G39430//AT2G34910//CYCB1;4 GO:0031323 regulation of cellular metabolic process BP 0.0900175342979101 AT-HSFB3//ATMYB12//KNAT4//ATWRKY75//AtMYB9//CDR1//AT5G66940//ANAC101//ARR18//AtI-2//AtMYB115//AT5G23650//AtTLP11//AIL6//AT5G01910//ZPR3//ACS9//CDC2//AT3G45220//ATMLH3//KNAT5//AT4G18870//AT4G18450//NGA4//ANAC041//AT1G19200//AT3G32090//pBRP2//AT3G20150//NF-YB5//AT2G31420//DEL3//ATERF1//ATACP5//FUS3//ARR22//WOX11//ATWRKY61//ATERF3//AT1G10780//ANAC020//CYCB2;1//ATMBF1A//CKS1//ATCYCD1;1//SGD9//ATZFP10//AT2G33720//AtRLP23//CYCB1;4 GO:0032502 developmental process BP 0.0912751810437261 AHL22//AT4G17280//MEE48//KNAT4//RAP2.11//AT5G19800//ATWRKY75//EIF2//ATGID1C//AT5G63990//ATDGK2//ANAC101//WOX2//TET15//UBC30//ATNAS2//ATGPT1//AT5G53100//ATRAB1A//ATGSL09//ATICMTA//AIL6//AT5G07420//AT5G01910//AT3G55890//ZPR3//CDC2//AT3G46480//ATSYP72//KAI2//SRS2//KNAT5//AT4G22490//AT4G08670//ASAR1//NGA4//AT4G01610//ANAC041//ATWI-12//FAR2//pBRP2//AT3G28560//AT3G20150//AT3G25290//FUS3//TCTP//AT3G07900//AT3G07830//MANIB//ACH2//AT1G48550//AT1G01640//ABCB10//AT1G64450//ANAC020//CYCB2;1//UGT74E2//AT2G04220//ATRAB-H1D//AGL61//AGO5//CKS1//ATEXPB2//ATCYCD1;1//AJH1//SGD9//AT2G39430//AT2G34910//CYCB1;4 GO:0009734 auxin-activated signaling pathway BP 0.0913161933632358 AIL6//TCTP//ABCB10 GO:0042127 regulation of cell proliferation BP 0.0913161933632358 WOX2//CDC2//FUS3 GO:0010383 cell wall polysaccharide metabolic proce... BP 0.0947965756723975 AT2G41610//SIS3//AT3G45710//AT4G27435//AT1G72220//ABCG35 GO:0098656 anion transmembrane transport BP 0.0965284767521301 AHL22//AMT1;2//AT2G43930 GO:0009640 photomorphogenesis BP 0.0965293119578958 AHL22//EIF2//KAI2//AJH1//SGD9 GO:0080090 regulation of primary metabolic process BP 0.0979330486774486 AT-HSFB3//ATMYB12//KNAT4//ATWRKY75//AtMYB9//AT5G66940//ANAC101//ARR18//AtMYB115//AT5G23650//AtTLP11//AIL6//AT5G01910//ZPR3//ACS9//CDC2//AT3G45220//ATMLH3//KNAT5//AT4G18870//AT4G18450//NGA4//ANAC041//AT1G19200//AT3G32090//pBRP2//AT3G20150//AT3G27210//NF-YB5//AT2G31420//DEL3//ATERF1//ATACP5//FUS3//ARR22//WOX11//ATWRKY61//ATERF3//AT1G10780//ANAC020//CYCB2;1//ATMBF1A//CKS1//ATCYCD1;1//SGD9//ATZFP10//AT2G33720//AtRLP23//CYCB1;4 GO:0071705 nitrogen compound transport BP 0.0994272576860058 AT4G17650//ARR18//ATGPT1//AtRLP55//AtGDU7//FLA21//AT5G02170//AT3G56200//AT3G45710//AT3G24060//AT1G76530//AT1G76520//ACH2//AMT1;2//AT1G09740//AT2G05600//AT2G39110//AT2G29370//AT2G43930 GO:0044038 cell wall macromolecule biosynthetic pro... BP 0.0998983551544917 AT2G41610//SIS3//AT3G45710//AT4G27435//AT1G72220 GO:0070589 cellular component macromolecule biosynt... BP 0.0998983551544917 AT2G41610//SIS3//AT3G45710//AT4G27435//AT1G72220 GO:0070592 cell wall polysaccharide biosynthetic pr... BP 0.0998983551544917 AT2G41610//SIS3//AT3G45710//AT4G27435//AT1G72220 GO:0030198 extracellular matrix organization BP 0.101859072825123 MEE48//AT4G08670//FAR2 GO:0043062 extracellular structure organization BP 0.101859072825123 MEE48//AT4G08670//FAR2