4.0:Analysis result:Information of module
msh1 recA3 untreated

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0019915
lipid storage
BP5.853e-04OLEO3 OLE2 ATGRP20 AtDSEL EDA8 ATGA3OX2 ABI4 ATEPR1 AT2G25890
GO:0071554
cell wall organization or biogenesis
BP6.510e-04AT-EXPR IRE GUT1 PIP2;4 QRT1 RGP4 AT5G48140 ATTIP2;3 ASFT AT5G39890 F8H AT5G18990 EXT10 ATEXP2 PIF6 AT3G59830 AT3G54580 ATHRGP1 ATSYP72 LTPG2 AT4G31020 TET5 AT4G13210 AT4G08410 AT-EXP1 AXY4L RLK902 AT3G08600 ATMBD9 AT1G02360 ATEXP7 AtRABA6a AT2G43610 AT2G43600 AT2G43580 OSU1 AT1G01225 ATEXP11 ARAC4 ANAC012 AtGXMT1 LEA7 ATGPX4 AtRABA1i TUB1 ATRAB-H1D AT1G04500 ATPRP2 RIC2 AT1G09460 AT1G04680 ARP2 AT1G23720 AT2G36710 ATPMEPCRD ATEPR1 PGA6 LCR72 AtPRK2 ATEXP3
GO:0009664
plant-type cell wall organization
BP1.774e-03AT-EXPR IRE AT5G48140 ASFT EXT10 ATEXP2 AT3G59830 AT3G54580 ATHRGP1 ATSYP72 AT4G08410 AT-EXP1 RLK902 ATEXP7 OSU1 ATEXP11 LEA7 ATGPX4 AtRABA1i ATRAB-H1D AT1G04500 ATPRP2 AT1G04680 ARP2 AT1G23720 ATEPR1 PGA6 LCR72 AtPRK2 ATEXP3
GO:0044036
cell wall macromolecule metabolic proces...
BP1.776e-03GUT1 PIP2;4 ATTIP2;3 ASFT AT5G39890 F8H PIF6 AT4G31020 TET5 AT4G13210 AXY4L AT1G02360 AtRABA6a AT2G43610 AT2G43600 AT2G43580 OSU1 AT1G01225 ANAC012 AtGXMT1 RIC2 AT1G09460 ARP2
GO:0045489
pectin biosynthetic process
BP2.716e-03ASFT OSU1 AT1G44830 ARAD1
GO:0001676
long-chain fatty acid metabolic process
BP2.745e-03LAG1 AT3G15870 AT1G06100 ADS1 ACX5
GO:0010089
xylem development
BP5.847e-03AT5G39890 PIF6 AT4G31020 TET5 AT4G13210 AtRABA6a AT1G01225 AT1G09460 ANAC037
GO:0045229
external encapsulating structure organiz...
BP6.202e-03AT-EXPR IRE QRT1 RGP4 AT5G48140 ASFT AT5G18990 EXT10 ATEXP2 AT3G59830 AT3G54580 ATHRGP1 ATSYP72 LAP5 AT4G08410 CYP704B1 AT-EXP1 RLK902 ATMBD9 ATEXP7 OSU1 ATEXP11 ARAC4 AT1G02813 LEA7 ATGPX4 AtRABA1i TUB1 ATRAB-H1D AT1G04500 ATPRP2 AT2G03740 AT1G04680 ARP2 AT1G23720 AT2G36710 ATPMEPCRD ATEPR1 PGA6 LCR72 AtPRK2 ATEXP3
GO:0051235
maintenance of location
BP6.647e-03OLEO3 OLE2 ATGRP20 AtDSEL EDA8 ATGA3OX2 ABI4 ATEPR1 AT2G25890
GO:0071669
plant-type cell wall organization or bio...
BP7.209e-03AT-EXPR IRE GUT1 AT5G48140 ASFT EXT10 ATEXP2 AT3G59830 AT3G54580 ATHRGP1 ATSYP72 AT4G08410 AT-EXP1 RLK902 AT3G08600 ATEXP7 OSU1 ATEXP11 ANAC012 LEA7 ATGPX4 AtRABA1i ATRAB-H1D AT1G04500 ATPRP2 AT1G04680 ARP2 AT1G23720 ATEPR1 PGA6 LCR72 AtPRK2 ATEXP3
GO:0009828
plant-type cell wall loosening
BP8.139e-03AT-EXPR ATEXP2 AT-EXP1 ATEXP7 ATEXP11 ATEXP3
GO:0071555
cell wall organization
BP9.437e-03AT-EXPR IRE QRT1 RGP4 AT5G48140 ASFT AT5G18990 EXT10 ATEXP2 AT3G59830 AT3G54580 ATHRGP1 ATSYP72 AT4G08410 AT-EXP1 RLK902 ATMBD9 ATEXP7 OSU1 ATEXP11 ARAC4 LEA7 ATGPX4 AtRABA1i TUB1 ATRAB-H1D AT1G04500 ATPRP2 AT1G04680 ARP2 AT1G23720 AT2G36710 ATPMEPCRD ATEPR1 PGA6 LCR72 AtPRK2 ATEXP3
GO:0010393
galacturonan metabolic process
BP1.348e-02QRT1 ASFT OSU1 AT1G44830 ARP2 ARAD1
GO:0016104
triterpenoid biosynthetic process
BP1.348e-02SQE1 SQP2 SQE3 BUL1 CYP51 AtBAS
GO:0019742
pentacyclic triterpenoid metabolic proce...
BP1.348e-02SQE1 SQP2 SQE3 BUL1 CYP51 AtBAS
GO:0019745
pentacyclic triterpenoid biosynthetic pr...
BP1.348e-02SQE1 SQP2 SQE3 BUL1 CYP51 AtBAS
GO:0045488
pectin metabolic process
BP1.348e-02QRT1 ASFT OSU1 AT1G44830 ARP2 ARAD1
GO:0010087
phloem or xylem histogenesis
BP1.641e-02AT5G39890 PIF6 AT4G31020 TET5 AT4G13210 AtRABA6a AT1G01225 AT1G09460 ANAC037
GO:0016126
sterol biosynthetic process
BP2.024e-02BEN1 SQE1 CPI1 ACLB-2 SQP2 SQE3 AT3G28200 LAG1 BUL1 PIP1;3 ATSMO1 SMT3 CYP51 AT2G05755 AtBAS
GO:0006066
alcohol metabolic process
BP2.053e-02BEN1 SQE1 AtcPT4 FOLK XBAT32 AT5G51950 CPI1 ACLB-2 AT5G48560 ATSIG5 SQP2 SQE3 CDS2 ATPUB44 AT3G28200 LAG1 BUL1 PIP1;3 AT1G73920 AT1G55960 ATSMO1 SMT3 ATGPX4 AT1G73050 EDA17 AT1G28640 CYP51 AT2G05755 AtBAS CVL1 BAS1
GO:0006722
triterpenoid metabolic process
BP2.088e-02SQE1 SQP2 SQE3 BUL1 CYP51 AtBAS
GO:0042886
amide transport
BP2.143e-02ATOPT8 AT5G46040 AT1G72125 AT1G66780 AT3G25260 AQP1 AT3G16180 SEL1 AT1G05700 ATOPT2 AtPTR6
GO:0000398
mRNA splicing, via spliceosome
BP2.412e-02At-SC35 AT5G59860 ARP1 AtRBP-DR1 ATPTB1
GO:0042181
ketone biosynthetic process
BP2.412e-02AtcPT4 AT5G10160 AT3G20160 ATICS2 DHNAT1
GO:1901661
quinone metabolic process
BP2.412e-02AtcPT4 AT5G10160 AT3G20160 ATICS2 DHNAT1
GO:1901663
quinone biosynthetic process
BP2.412e-02AtcPT4 AT5G10160 AT3G20160 ATICS2 DHNAT1
GO:0016125
sterol metabolic process
BP2.591e-02BEN1 SQE1 CPI1 ACLB-2 SQP2 SQE3 AT3G28200 LAG1 BUL1 PIP1;3 ATSMO1 SMT3 CYP51 AT2G05755 AtBAS
GO:0009845
seed germination
BP2.608e-02OLE2 LECRKA4.3 DAG1 ARP1 AtDSEL EDA8 ATPTB1 ATGA3OX2 ABI4 AHP5 SOM ATEPR1 CIPK3
GO:0016567
protein ubiquitination
BP2.608e-02XBAT32 OLE2 AT5G09800 ATL4 EDA8 ATPUB44 ATGA3OX2 AT1G49210 ABI4 ASK17 ATEPR1 AtTHO6 ATL9
GO:0000226
microtubule cytoskeleton organization
BP2.667e-02AT4G17000 AtENODL13 CPI1 AT3G51720 AtENODL15 ATLP-1 AT3G02120 CDKB2;1 AT1G72480 ARAC4 AtENODL14 MAP65-5
GO:0071483
cellular response to blue light
BP3.051e-02ATSIG5 ATPIRIN1 ATMYB38
GO:0000375
RNA splicing, via transesterification re...
BP3.240e-02At-SC35 AT5G59860 ARP1 AtRBP-DR1 ATPTB1
GO:0000377
RNA splicing, via transesterification re...
BP3.240e-02At-SC35 AT5G59860 ARP1 AtRBP-DR1 ATPTB1
GO:0007010
cytoskeleton organization
BP3.312e-02AT4G17000 AtENODL13 CPI1 AT3G51720 ARAC8 ADF9 AtENODL15 AT4G26390 ATLP-1 AT3G02120 ATMBD9 CDKB2;1 AT1G72480 ARAC4 TUA1 TUB1 AtENODL14 UKL3 AT1G62450 MAP65-5
GO:0009827
plant-type cell wall modification
BP3.366e-02AT-EXPR IRE AT5G48140 ATEXP2 AT3G59830 ATSYP72 AT-EXP1 ATEXP7 ATEXP11 LEA7 ATGPX4 AtRABA1i ATRAB-H1D AT1G04500 ATEPR1 PGA6 LCR72 AtPRK2 ATEXP3
GO:0090351
seedling development
BP3.370e-02OLE2 LECRKA4.3 DAG1 ARP1 AtDSEL EDA8 ATPTB1 ATGA3OX2 ABI4 AHP5 SOM ATEPR1 CIPK3
GO:0006857
oligopeptide transport
BP3.402e-02ATOPT8 AT5G46040 AT1G72125 AT1G66780 AT3G25260 AT3G16180 SEL1 AT1G05700 ATOPT2 AtPTR6
GO:0015833
peptide transport
BP3.402e-02ATOPT8 AT5G46040 AT1G72125 AT1G66780 AT3G25260 AT3G16180 SEL1 AT1G05700 ATOPT2 AtPTR6
GO:0009888
tissue development
BP3.638e-02ARR11 ATGER3 PIP2;4 LRL3 AT5G54040 CYP705A12 OLE2 AT5G39890 ARF8 DCR CYC2BAT EXT10 ATPRP3 PIF6 AGP3 AT4G33730 AtENODL15 UTr7 AT4G31020 AT4G28780 AT4G28650 FEY TET5 AT4G13210 FLA EDA8 ATLP-1 RLK902 AFB2 ATMBD9 ATEXP7 CDKB2;1 AtRABA6a ATGA3OX2 AT1G01225 ARAC4 AT1G33811 ATCEL2 TUB1 ABI4 ATHPP2C5 FAF2 AT1G09460 AT1G09600 AT1G04680 ATCYCD1;1 AT1G30870 ATEPR1 ANAC037 PGA6 LSH3 IKU1 ATL9
GO:0008202
steroid metabolic process
BP3.696e-02BEN1 SQE1 XBAT32 ORP4C CPI1 ACLB-2 AT5G48560 SQP2 SQE3 AT3G28200 LAG1 BUL1 PIP1;3 ATSMO1 SMT3 CYP51 AT2G05755 AtBAS BAS1
GO:0050826
response to freezing
BP3.712e-02OLE2 EDA8 ATGA3OX2 ABI4 ATEPR1
GO:0016998
cell wall macromolecule catabolic proces...
BP3.732e-02AT1G02360 AT2G43610 AT2G43600 AT2G43580
GO:0007017
microtubule-based process
BP3.846e-02AT4G17000 AtENODL13 CPI1 AT3G51720 AtENODL15 ATLP-1 AT3G02120 CDKB2;1 AT1G72480 ARAC4 TUA1 TUB1 AtENODL14 MAP65-5
GO:0048581
negative regulation of post-embryonic de...
BP3.856e-02SKI8 AtDSEL FLA BBX7 SOM AtTHO6
GO:0032446
protein modification by small protein co...
BP4.280e-02XBAT32 OLE2 AT5G09800 ATL4 EDA8 ATPUB44 ATGA3OX2 AT1G49210 ABI4 ASK17 ATEPR1 AtTHO6 ATL9
GO:0009831
plant-type cell wall modification involv...
BP4.381e-02ATEXP2 ATEXP7 ATEXP11 ATEXP3
GO:0055114
oxidation-reduction process
BP4.535e-02PSBG YUC7 SQE1 AT5G16230 AT5G65840 ATFLS5 AT5G59930 AT5G54040 AT5G51950 CYP705A12 AT5G39890 AT5G40150 AT5G37980 SQP2 AtTK1b AT5G17960 ATFLS1 KUOX1 LAC13 CYP77A4 AT5G03360 CYP78A9 AT3G59845 CYP71B30P CYP76G1 SQE3 AT4G35820 CER4 SKS1 ATGA3OX3 AT4G20800 AT4G13130 AT1G55390 CYP704B1 AT3G28200 LBO1 CYP71B16 CYP71B17 AT3G15870 BUL1 AT3G06990 CYP77A6 CYP94B2 ATGA20OX5 AT1G55290 CYP86A7 ATGA3OX2 ATGA2OX1 AT1G44970 AT1G06020 AT1G06100 ATSMO1 PER4 ATGPX4 AT1G73050 EDA17 AT1G49390 CYP77B1 CYP51 ATPAO4 AT1G78550 AT2G04500 AT2G42670 CYP79C1 AT1G55700 CYP86C1 sks12 AT1G30870 ACX5 HCS1 AT2G12190 AT2G35380 AT2G40050 BAS1
GO:0009624
response to nematode
BP4.573e-02AT5G46040 PHT4;6 ABCG6 ATGH9A3 ATIRT3 ATCEL2 ABCG1
GO:0046351
disaccharide biosynthetic process
BP4.778e-02ATSUS5 ATTPS2 TPPD AT1G06020 ATTPS9
GO:0002213
defense response to insect
BP5.089e-02AT3G15870 AT1G06100 ADS1 ACX5
GO:0042547
cell wall modification involved in multi...
BP5.089e-02ATEXP2 ATEXP7 ATEXP11 ATEXP3
GO:0070647
protein modification by small protein co...
BP5.510e-02FOLK XBAT32 ACLB-2 OLE2 AT5G09800 ATL4 EDA8 ATPUB44 ATGA3OX2 AT1G49210 ABI4 ASK17 ATEPR1 AtTHO6 ATL9
GO:0046165
alcohol biosynthetic process
BP5.606e-02BEN1 SQE1 AtcPT4 XBAT32 CPI1 ACLB-2 AT5G48560 ATSIG5 SQP2 SQE3 CDS2 ATPUB44 AT3G28200 LAG1 BUL1 PIP1;3 AT1G73920 AT1G55960 ATSMO1 SMT3 ATGPX4 AT1G28640 CYP51 AT2G05755 AtBAS
GO:0010143
cutin biosynthetic process
BP5.824e-02DCR CYP77A6 ATGPAT6
GO:0042991
transcription factor import into nucleus
BP5.824e-02CRF3 CRF2 AT1G78400
GO:0006694
steroid biosynthetic process
BP6.585e-02BEN1 SQE1 XBAT32 CPI1 ACLB-2 AT5G48560 SQP2 SQE3 AT3G28200 LAG1 BUL1 PIP1;3 ATSMO1 SMT3 CYP51 AT2G05755 AtBAS
GO:0009741
response to brassinosteroid
BP7.003e-02ASL16 BRS1 SAUR63 AT3G17950 ATGSK1 AUF1 AT2G21200 ANAC037 BAS1
GO:0009756
carbohydrate mediated signaling
BP7.399e-02OLE2 EDA8 ATGA3OX2 ABI4 ATEPR1
GO:0010182
sugar mediated signaling pathway
BP7.399e-02OLE2 EDA8 ATGA3OX2 ABI4 ATEPR1
GO:0005992
trehalose biosynthetic process
BP8.144e-02ATTPS2 TPPD ATTPS9
GO:0006213
pyrimidine nucleoside metabolic process
BP8.144e-02AtTK1b AT4G29610 NSH1
GO:0051241
negative regulation of multicellular org...
BP8.246e-02SKI8 AtDSEL FLA BBX7 SOM AtTHO6
GO:0000911
cytokinesis by cell plate formation
BP8.338e-02AT4G17000 AtENODL13 AT3G51720 AtENODL15 ATLP-1 AT3G02120 CDKB2;1 AtENODL14
GO:0006334
nucleosome assembly
BP8.933e-02ATHTA1 AT5G10400 AT5G02570 AT3G53650 HTA13 AT1G54240
GO:0034728
nucleosome organization
BP8.933e-02ATHTA1 AT5G10400 AT5G02570 AT3G53650 HTA13 AT1G54240
GO:0065004
protein-DNA complex assembly
BP8.933e-02ATHTA1 AT5G10400 AT5G02570 AT3G53650 HTA13 AT1G54240
GO:0071824
protein-DNA complex subunit organization
BP8.933e-02ATHTA1 AT5G10400 AT5G02570 AT3G53650 HTA13 AT1G54240
GO:0005991
trehalose metabolic process
BP9.431e-02ATTPS2 TPPD ATTPS9
GO:0006743
ubiquinone metabolic process
BP9.431e-02AtcPT4 AT5G10160 AT3G20160
GO:0006744
ubiquinone biosynthetic process
BP9.431e-02AtcPT4 AT5G10160 AT3G20160
GO:0048527
lateral root development
BP9.465e-02CLEL GATA23 XBAT32 CYP705A12 ATPRP3 ASL16 UTr7 ABI4
GO:0006397
mRNA processing
BP9.785e-02At-SC35 AT5G59860 ARP1 AtRBP-DR1 ATPTB1
GO:0071322
cellular response to carbohydrate stimul...
BP9.785e-02OLE2 EDA8 ATGA3OX2 ABI4 ATEPR1
GO:0048507
meristem development
BP1.000e-01ARR11 OLE2 ARF8 AtENODL15 AT4G28650 FEY FLA EDA8 ATLP-1 RLK902 CDKB2;1 ATGA3OX2 ATCEL2 ABI4 FAF2 AT1G04680 ATEPR1 PGA6 LSH3
GO:0032506
cytokinetic process
BP1.006e-01AT4G17000 AtENODL13 AT3G51720 AtENODL15 ATLP-1 AT3G02120 CDKB2;1 AtENODL14
GO:1902410
mitotic cytokinetic process
BP1.006e-01AT4G17000 AtENODL13 AT3G51720 AtENODL15 ATLP-1 AT3G02120 CDKB2;1 AtENODL14
GO:0016572
histone phosphorylation
BP1.053e-01AtAUR1 AT3G02640 CDKB2;1 AtENODL14
GO:0010876
lipid localization
BP1.053e-01OLEO3 OLE2 ATGRP20 PRA1.A1 LTPG2 AtDSEL EDA8 AT2G15325 ATGA3OX2 ABI4 AT1G12100 AT1G62510 ATEPR1 AT2G25890
GO:0042545
cell wall modification
BP1.097e-01AT-EXPR IRE QRT1 AT5G48140 AT5G18990 ATEXP2 AT3G59830 ATSYP72 AT-EXP1 RLK902 ATEXP7 ATEXP11 LEA7 ATGPX4 AtRABA1i ATRAB-H1D AT1G04500 AT2G36710 ATPMEPCRD ATEPR1 PGA6 LCR72 AtPRK2 ATEXP3
GO:0000281
mitotic cytokinesis
BP1.131e-01AT4G17000 AtENODL13 AT3G51720 AtENODL15 ATLP-1 AT3G02120 CDKB2;1 AtENODL14
GO:0010162
seed dormancy process
BP1.131e-01OLE2 AT3G50850 ARAC8 EDA8 ATGA3OX2 ABI4 ATEPR1 AT2G25890
GO:0022611
dormancy process
BP1.131e-01OLE2 AT3G50850 ARAC8 EDA8 ATGA3OX2 ABI4 ATEPR1 AT2G25890
GO:0006084
acetyl-CoA metabolic process
BP1.134e-01CPI1 ACLB-2 AtENODL15 BUL1 PIP1;3 SMT3 ATCOAA
GO:0016131
brassinosteroid metabolic process
BP1.148e-01BEN1 SQE1 XBAT32 CPI1 ACLB-2 AT5G48560 BUL1 PIP1;3 SMT3 BAS1
GO:0009312
oligosaccharide biosynthetic process
BP1.157e-01ATSUS5 ATTPS2 TPPD AT1G06020 ATTPS9
GO:0061640
cytoskeleton-dependent cytokinesis
BP1.196e-01AT4G17000 AtENODL13 AT3G51720 AtENODL15 ATLP-1 AT3G02120 CDKB2;1 AtENODL14
GO:0031497
chromatin assembly
BP1.198e-01ATHTA1 AT5G10400 AT5G02570 AT3G53650 HTA13 AT1G54240
GO:0016128
phytosteroid metabolic process
BP1.204e-01BEN1 SQE1 XBAT32 CPI1 ACLB-2 AT5G48560 BUL1 PIP1;3 SMT3 BAS1
GO:0009813
flavonoid biosynthetic process
BP1.231e-01BEN1 AT5G66230 ATFLS5 ATFLS1 KUOX1 ABCI20 ATMYB11 ARR5 SQE3 AT1G49390 AT2G23910 AT2G03310
GO:0010383
cell wall polysaccharide metabolic proce...
BP1.231e-01GUT1 PIP2;4 ATTIP2;3 ASFT F8H AXY4L AtRABA6a OSU1 ANAC012 AtGXMT1 RIC2 ARP2
GO:0044038
cell wall macromolecule biosynthetic pro...
BP1.262e-01GUT1 PIP2;4 ATTIP2;3 ASFT F8H AtRABA6a OSU1 ANAC012 AtGXMT1 RIC2
GO:0070589
cellular component macromolecule biosynt...
BP1.262e-01GUT1 PIP2;4 ATTIP2;3 ASFT F8H AtRABA6a OSU1 ANAC012 AtGXMT1 RIC2
GO:0070592
cell wall polysaccharide biosynthetic pr...
BP1.262e-01GUT1 PIP2;4 ATTIP2;3 ASFT F8H AtRABA6a OSU1 ANAC012 AtGXMT1 RIC2
GO:0009812
flavonoid metabolic process
BP1.283e-01BEN1 AT5G66230 ATFLS5 ATFLS1 KUOX1 ABCI20 ATMYB11 ARR5 SQE3 AT1G49390 AHP5 AT2G23910 AT2G03310
GO:0006333
chromatin assembly or disassembly
BP1.333e-01ATHTA1 AT5G10400 AT5G02570 AT3G53650 HTA13 ATSMO1 AT1G04880 AT1G54240
GO:0006114
glycerol biosynthetic process
BP1.344e-01AT1G73920 AT1G28640
GO:0016032
viral process
BP1.344e-01TOM2A TOM3
GO:0072529
pyrimidine-containing compound catabolic...
BP1.344e-01AT4G29610 NSH1
GO:0048580
regulation of post-embryonic development
BP1.356e-01OLE2 ARF8 CYC2BAT AT5G08580 ARP1 GATA18 SKI8 AtDSEL FLA EDA8 BBX7 ATGA3OX2 ABI4 AHP5 SOM ATEPR1 IKU1 AtTHO6
GO:0000910
cytokinesis
BP1.365e-01AT4G17000 AtENODL13 CPI1 AT3G51720 AtENODL15 ATLP-1 AT3G02120 CDKB2;1 AtENODL14