GOID TERM ONTOLOGY pValue Genes GO:0018202 peptidyl-histidine modification BP 0.000501266847207769 ERS//AHK5//FHY2 GO:1902531 regulation of intracellular signal trans... BP 0.00145709391545448 ERS//AHK5//AT4G35380//EDA10 GO:0044700 single organism signaling BP 0.0040449425379466 ERS//AHK5//AT1G50740//AT5G58300//CSA1//BIM1//AT3G47380//AT4G35380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//ATCCH1//AFP3//ARFC1//DELTA-VPE//AtRLP43//AT1G78990//AOC3//MKS1//ANAC002//EDA10//PRK5//ATWRKY40//ATRHM1//ALDH7B4//CHR35//FHY2//RPT5B//AT2G02780 GO:0023052 signaling BP 0.00409931646605328 ERS//AHK5//AT1G50740//AT5G58300//CSA1//BIM1//AT3G47380//AT4G35380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//ATCCH1//AFP3//ARFC1//DELTA-VPE//AtRLP43//AT1G78990//AOC3//MKS1//ANAC002//EDA10//PRK5//ATWRKY40//ATRHM1//ALDH7B4//CHR35//FHY2//RPT5B//AT2G02780 GO:0007165 signal transduction BP 0.00438410459826502 ERS//AHK5//AT1G50740//AT5G58300//CSA1//BIM1//AT3G47380//AT4G35380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//ATCCH1//AFP3//ARFC1//DELTA-VPE//AtRLP43//AT1G78990//AOC3//MKS1//ANAC002//EDA10//PRK5//ATWRKY40//ATRHM1//ALDH7B4//FHY2//RPT5B//AT2G02780 GO:0048583 regulation of response to stimulus BP 0.00535142686321973 ERS//AT1G25275//AHK5//AT1G50740//AT3G47380//AT4G35380//ATMKK2//AT4G26120//AT4G20830//AOC3//MKS1//ANAC002//EDA10//ATWRKY40//ATRHM1 GO:0007154 cell communication BP 0.00607796562013705 ERS//AHK5//AT1G50740//AT5G58300//CSA1//BIM1//BHLH039//AT3G47380//AT4G35380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//ATCCH1//AFP3//ARFC1//DELTA-VPE//AtRLP43//AT1G78990//AOC3//MKS1//AT1G26730//ANAC002//EDA10//PRK5//NIP6//ATWRKY40//ATRHM1//ALDH7B4//CHR35//FHY2//RPT5B//AT2G02780 GO:0009966 regulation of signal transduction BP 0.00709012169856255 ERS//AHK5//AT4G35380//ANAC002//EDA10//ATRHM1 GO:0023051 regulation of signaling BP 0.00709012169856255 ERS//AHK5//AT4G35380//ANAC002//EDA10//ATRHM1 GO:0046685 response to arsenic-containing substance BP 0.00712353670100453 AT5G05880//FHY2//NET4B GO:0010646 regulation of cell communication BP 0.00813615786465186 ERS//AHK5//AT4G35380//ANAC002//EDA10//ATRHM1 GO:0046482 para-aminobenzoic acid metabolic process BP 0.0109831294555989 AT4G22530//ATCAD1//CID11 GO:0009719 response to endogenous stimulus BP 0.011421616250108 ERS//AHK5//UBC17//AT1G50740//AILP1//BIM1//AT3G61900//AT3G47380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//AtMYB6//AtPME41//AFP3//DELTA-VPE//AT1G78990//AOC3//AIR12//ATMYBL2//SKP2A//ANAC002//LHY//ATWRKY40//ATRHM1//ALDH7B4//AtLEA4-2 GO:0071310 cellular response to organic substance BP 0.0122123524790319 ERS//AHK5//AT1G50740//BIM1//AT3G47380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//AFP3//DELTA-VPE//AT1G78990//AOC3//SKP2A//ANAC002//ATWRKY40//ATRHM1//ALDH7B4//CHR35//RPT5B GO:0010105 negative regulation of ethylene-activate... BP 0.0137660984776093 ERS//AHK5 GO:0070298 negative regulation of phosphorelay sign... BP 0.0137660984776093 ERS//AHK5 GO:0042537 benzene-containing compound metabolic pr... BP 0.0145336378405553 AT3G47380//ATMKK2//AT4G26120//AT4G22530//ATCAD1//CID11//ATWRKY40 GO:0010104 regulation of ethylene-activated signali... BP 0.0163399849608365 ERS//AHK5 GO:0070297 regulation of phosphorelay signal transd... BP 0.0163399849608365 ERS//AHK5 GO:0033993 response to lipid BP 0.017129894748372 AHK5//UBC17//BIM1//ATMKK2//AtMYB6//AtPME41//AFP3//DELTA-VPE//AOC3//ATMYBL2//ANAC002//LHY//ATWRKY40//ALDH7B4//AtLEA4-2 GO:0070887 cellular response to chemical stimulus BP 0.0174285148509593 ERS//AHK5//AT1G50740//BIM1//AT3G47380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//AFP3//DELTA-VPE//AT1G78990//AOC3//SKP2A//ANAC002//NIP6//ATWRKY40//ATRHM1//ALDH7B4//CHR35//RPT5B GO:0055076 transition metal ion homeostasis BP 0.020161920690364 ZIF1//BHLH039//ATMT-1 GO:0009733 response to auxin BP 0.0214138583295689 AILP1//AT3G61900//AT1G78990//AIR12//SKP2A//LHY//ATRHM1//ALDH7B4 GO:0009739 response to gibberellin BP 0.0220011672765808 UBC17//AtMYB6//DELTA-VPE//ATMYBL2//LHY GO:0009725 response to hormone BP 0.0228331859311292 ERS//AHK5//UBC17//AILP1//BIM1//AT3G61900//AT3G47380//ATMKK2//AtMYB6//AtPME41//AFP3//DELTA-VPE//AT1G78990//AOC3//AIR12//ATMYBL2//SKP2A//ANAC002//LHY//ATWRKY40//ATRHM1//ALDH7B4//AtLEA4-2 GO:0002252 immune effector process BP 0.0243112827574416 ATIPK1//AT4G26120//AT4G22530//AT4G20830//ATWRKY40//MAX2//CHR35 GO:0035556 intracellular signal transduction BP 0.0284575169248231 ERS//AHK5//AT3G47380//AT4G35380//ATMKK2//AT4G26120//ATCCH1//ARFC1//AOC3//EDA10//ATWRKY40//ALDH7B4 GO:0097305 response to alcohol BP 0.0285376794721677 AHK5//BIM1//ATMKK2//AtPME41//AFP3//DELTA-VPE//AOC3//ATMYBL2//ANAC002//LHY//ATWRKY40//ALDH7B4//AtLEA4-2 GO:0002376 immune system process BP 0.0292048724061874 AT1G25275//AT1G50740//ATIPK1//NAK//PMR6//AT3G47380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//AOC3//MKS1//ATCAD1//ATWRKY40//MAX2//CHR35 GO:0032870 cellular response to hormone stimulus BP 0.0310258496041233 ERS//AHK5//BIM1//AT3G47380//ATMKK2//AFP3//DELTA-VPE//AT1G78990//AOC3//SKP2A//ANAC002//ATWRKY40//ATRHM1//ALDH7B4 GO:0071495 cellular response to endogenous stimulus BP 0.0319723842738152 ERS//AHK5//BIM1//AT3G47380//ATMKK2//AFP3//DELTA-VPE//AT1G78990//AOC3//SKP2A//ANAC002//ATWRKY40//ATRHM1//ALDH7B4 GO:0071365 cellular response to auxin stimulus BP 0.0325105964873294 AT1G78990//SKP2A//ATRHM1 GO:0051607 defense response to virus BP 0.0348392662268676 ATIPK1//ATWRKY40//MAX2//CHR35 GO:0098771 inorganic ion homeostasis BP 0.0378782088799342 ATIPK1//ZIF1//BHLH039//ATMT-1 GO:0045087 innate immune response BP 0.0408883819306239 AT1G25275//AT1G50740//NAK//PMR6//AT3G47380//ATMKK2//AT4G26120//AT4G20830//AOC3//MKS1//ATCAD1//ATWRKY40//MAX2//CHR35 GO:0048523 negative regulation of cellular process BP 0.0421186734767396 ERS//AHK5//ATMKK2//AT4G20830//AOC3//SKP2A//ANAC002//ATWRKY40//CHR35//FHY2//AT2G23360//ACK2 GO:0006955 immune response BP 0.0426296098019363 AT1G25275//AT1G50740//NAK//PMR6//AT3G47380//ATMKK2//AT4G26120//AT4G20830//AOC3//MKS1//ATCAD1//ATWRKY40//MAX2//CHR35 GO:0009788 negative regulation of abscisic acid-act... BP 0.0431293717790149 AHK5//ANAC002 GO:1901420 negative regulation of response to alcoh... BP 0.0431293717790149 AHK5//ANAC002 GO:0097306 cellular response to alcohol BP 0.0436647904205156 AHK5//BIM1//ATMKK2//AFP3//AOC3//ANAC002//ATWRKY40 GO:0030968 endoplasmic reticulum unfolded protein r... BP 0.044447153022927 AT1G50740//ATMKK2//AT4G22530//AT4G20830//ATWRKY40 GO:0071396 cellular response to lipid BP 0.0457439885561869 AHK5//BIM1//ATMKK2//AFP3//DELTA-VPE//AOC3//ANAC002//ATWRKY40 GO:0009755 hormone-mediated signaling pathway BP 0.0457578373242344 ERS//AHK5//BIM1//AT3G47380//ATMKK2//AFP3//DELTA-VPE//AT1G78990//AOC3//ANAC002//ATWRKY40//ATRHM1//ALDH7B4 GO:0009737 response to abscisic acid BP 0.0468315476753075 AHK5//ATMKK2//AFP3//DELTA-VPE//AOC3//ATMYBL2//ANAC002//LHY//ATWRKY40//ALDH7B4//AtLEA4-2 GO:0006986 response to unfolded protein BP 0.0472408844451655 AT1G50740//ATMKK2//AT4G22530//AT4G20830//ATWRKY40 GO:0034620 cellular response to unfolded protein BP 0.0472408844451655 AT1G50740//ATMKK2//AT4G22530//AT4G20830//ATWRKY40 GO:0035967 cellular response to topologically incor... BP 0.0472408844451655 AT1G50740//ATMKK2//AT4G22530//AT4G20830//ATWRKY40 GO:0007264 small GTPase mediated signal transductio... BP 0.0479902873374753 AT4G35380//ARFC1//EDA10 GO:0015824 proline transport BP 0.0479902873374753 AT3G47380//AT3G43270//AtPME41 GO:0009873 ethylene-activated signaling pathway BP 0.0496780018744906 ERS//AHK5//ATWRKY40//ALDH7B4 GO:0009738 abscisic acid-activated signaling pathwa... BP 0.0499472518056161 AHK5//ATMKK2//AFP3//AOC3//ANAC002//ATWRKY40 GO:0046189 phenol-containing compound biosynthetic ... BP 0.0501368752054476 AT3G47380//ATMKK2//AT4G26120//ATMYBL2//ATWRKY40 GO:0015804 neutral amino acid transport BP 0.0504494610363128 AT3G47380//AT3G43270//AtPME41 GO:0009646 response to absence of light BP 0.0513186803764046 ATWRKY40//AT1G13990 GO:1902532 negative regulation of intracellular sig... BP 0.0513186803764046 ERS//AHK5 GO:1901617 organic hydroxy compound biosynthetic pr... BP 0.0519742915903539 AT5G19340//ATIPK1//AT3G47380//ATMKK2//AT4G26120//AT3G10720//ATMYBL2//NIP6//ATWRKY40//ATRHM1 GO:0009968 negative regulation of signal transducti... BP 0.0529689323895792 ERS//AHK5//ANAC002 GO:0010648 negative regulation of cell communicatio... BP 0.0529689323895792 ERS//AHK5//ANAC002 GO:0023057 negative regulation of signaling BP 0.0529689323895792 ERS//AHK5//ANAC002 GO:0009695 jasmonic acid biosynthetic process BP 0.0533810116272607 ATCCH1//AOC3//ANAC002//ATWRKY40 GO:0008219 cell death BP 0.0536600837414534 AT1G50740//AT3G47380//ATMKK2//ATMLO13//AT4G20830//DELTA-VPE//AOC3//ATMLO4//ATWRKY40 GO:0016265 death BP 0.0536600837414534 AT1G50740//AT3G47380//ATMKK2//ATMLO13//AT4G20830//DELTA-VPE//AOC3//ATMLO4//ATWRKY40 GO:0051716 cellular response to stimulus BP 0.0556451213996143 ERS//AHK5//AT1G50740//AT5G58300//CSA1//BIM1//BHLH039//AT3G47380//AT4G35380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//ATCCH1//AFP3//ARFC1//DELTA-VPE//AtRLP43//AT1G78990//AOC3//MKS1//ATCAD1//SKP2A//AT1G26730//ANAC002//EDA10//PRK5//NIP6//ATWRKY40//ATRHM1//ALDH7B4//CHR35//FHY2//RPT5B//AT2G02780 GO:0043900 regulation of multi-organism process BP 0.0592095722441578 AT3G47380//ATMKK2//PRK5//ATWRKY40 GO:0010101 post-embryonic root morphogenesis BP 0.0600127060998215 AIR12//SKP2A GO:0010102 lateral root morphogenesis BP 0.0600127060998215 AIR12//SKP2A GO:0010440 stomatal lineage progression BP 0.0600127060998215 SCD1//ACK2 GO:0006468 protein phosphorylation BP 0.0607487878010741 ERS//AHK5//ANX2//LYK3//AT5G58300//NAK//AT5G02070//AT4G34500//ATMKK2//CPK15//ATMKK10//PRK5//FHY2//AT2G02780//AP4.3A//ACK2 GO:0051606 detection of stimulus BP 0.0632764868654297 AT3G47380//ATMKK2//ATWRKY40//FHY2 GO:0071215 cellular response to abscisic acid stimu... BP 0.0634318189819989 AHK5//ATMKK2//AFP3//AOC3//ANAC002//ATWRKY40 GO:0050832 defense response to fungus BP 0.0643196886529149 AT1G50740//ATIPK1//AT3G47380//ATMKK2//AOC3//ATWRKY40//CHR35 GO:0071369 cellular response to ethylene stimulus BP 0.0674868936196193 ERS//AHK5//ATWRKY40//ALDH7B4 GO:0009914 hormone transport BP 0.0693146193520565 ATRHM1//MAX2//ROPGAP3 GO:0060918 auxin transport BP 0.0693146193520565 ATRHM1//MAX2//ROPGAP3 GO:0002679 respiratory burst involved in defense re... BP 0.0696454476184909 AT4G26120//AT4G22530//AT4G20830//ATWRKY40 GO:0045730 respiratory burst BP 0.0696454476184909 AT4G26120//AT4G22530//AT4G20830//ATWRKY40 GO:0048519 negative regulation of biological proces... BP 0.0709672832553825 ERS//AHK5//AtGBF1//AT3G47380//ATMKK2//AT4G26120//AT4G20830//AOC3//SKP2A//ANAC002//LHY//ATWRKY40//CHR35//FHY2//AT2G23360//ACK2 GO:0009615 response to virus BP 0.0718392993829313 ATIPK1//ATWRKY40//MAX2//CHR35 GO:0031347 regulation of defense response BP 0.0736584204600664 AT1G25275//AT1G50740//AT3G47380//ATMKK2//AT4G26120//AT4G20830//AOC3//MKS1//ATWRKY40 GO:0042545 cell wall modification BP 0.0737231275428378 PMR6//AT3G43270//DES-1-LIKE//ATCCH1//AtPME41//AT3G10720//ADPG2 GO:0018958 phenol-containing compound metabolic pro... BP 0.0751193052710105 AT3G47380//ATMKK2//AT4G26120//ATMYBL2//ATWRKY40 GO:0009595 detection of biotic stimulus BP 0.0752137529517492 AT3G47380//ATMKK2//ATWRKY40 GO:0006612 protein targeting to membrane BP 0.0794442146042198 AT1G50740//AT3G47380//ATMKK2//AT4G20830//AOC3//AT1G48160//ATWRKY40 GO:0009723 response to ethylene BP 0.0794442146042198 ERS//AHK5//AOC3//ATMYBL2//LHY//ATWRKY40//ALDH7B4 GO:0000160 phosphorelay signal transduction system BP 0.0809631778284117 ERS//AHK5//ATWRKY40//ALDH7B4 GO:0048585 negative regulation of response to stimu... BP 0.082399444347865 ERS//AHK5//AT3G47380//ATMKK2//AT4G26120//ANAC002//ATWRKY40 GO:0009751 response to salicylic acid BP 0.0835856280655316 AT3G47380//ATMKK2//AT4G26120//AtMYB6//AOC3//ATMYBL2//LHY//ATWRKY40 GO:0007033 vacuole organization BP 0.0836862634607039 ATCCH1//ARFC1 GO:0072657 protein localization to membrane BP 0.0854176421274044 AT1G50740//AT3G47380//ATMKK2//AT4G20830//AOC3//AT1G48160//ATWRKY40 GO:0090150 establishment of protein localization to... BP 0.0854176421274044 AT1G50740//AT3G47380//ATMKK2//AT4G20830//AOC3//AT1G48160//ATWRKY40 GO:0009694 jasmonic acid metabolic process BP 0.0857307361116438 ATCCH1//AOC3//ANAC002//ATWRKY40 GO:0006952 defense response BP 0.0868115879119964 AT1G25275//AT1G50740//AT5G28010//ATIPK1//CSA1//NAK//PMR6//AT3G47380//ATMKK2//AT4G26120//ATMLO13//AT4G22530//AT4G20830//AOC3//MKS1//AT1G12290//ATCAD1//ATMLO4//ATWRKY40//MAX2//CHR35 GO:0080134 regulation of response to stress BP 0.0896968193131695 AT1G25275//AT1G50740//AT3G47380//ATMKK2//AT4G26120//AT4G20830//AOC3//MKS1//ATWRKY40 GO:0010200 response to chitin BP 0.0905705116959193 AT1G50740//AT3G47380//ATMKK2//AT4G26120//AT4G22530//AT4G20830//ANAC002//ATWRKY40 GO:0018193 peptidyl-amino acid modification BP 0.0908329548866161 ERS//AHK5//AT5G16300//CHR35//FHY2//AT2G23360 GO:0055065 metal ion homeostasis BP 0.0908860838417787 ZIF1//BHLH039//ATMT-1 GO:0016310 phosphorylation BP 0.093163834965012 ERS//AHK5//ANX2//LYK3//AT5G58300//NAK//AT5G02070//AT3G47380//AT4G34500//ATMKK2//CPK15//ATMKK10//PRK5//ATWRKY40//FHY2//AT2G02780//AP4.3A//ACK2 GO:0050896 response to stimulus BP 0.0951747417134146 ERS//MIZ1//ATECI3//AT1G25275//ATS1P//AHK5//UBC17//AT1G50740//AT5G28010//AT5G59070//AT5G58300//ATIPK1//AILP1//AT5G18470//CSA1//ABCG6//ZIF1//BIM1//AT5G05880//NAK//AT3G61900//BHLH039//PMR6//AT3G47380//AT4G35380//ATMKK2//AT4G26120//ATMLO13//AT4G22530//AT4G20830//AtMYB6//ATCCH1//AtPME41//AFP3//ARFC1//EIF4B1//DELTA-VPE//AtRLP43//AT1G78990//AOC3//MKS1//AIR12//AT1G12290//ATMYBL2//AT1G72730//ATCAD1//ATMLO4//SKP2A//AT1G26730//ANAC002//LHY//EDA10//PRK5//NIP6//ATWRKY40//AT1G13990//ATRHM1//ALDH7B4//MAX2//CHR35//FHY2//RPT5B//UGT73C1//ROPGAP3//AtLEA4-2//AT2G02780//NET4B GO:0044765 single-organism transport BP 0.0956222992837179 ATS1P//AT5G15880//AT1G50740//ATATG3//AT5G59250//ATUCP2//AT5G49540//ZIF1//AT3G47380//AT3G43270//AT4G35380//ATCNGC9//ATMKK2//ACS7//ABCB28//AT4G20830//ATCCH1//AtPME41//AT3G25610//ARFC1//AOC3//AT1G19450//AT1G48160//AT1G26730//NIP6//ATWRKY40//ATRHM1//MAX2//ATOCT2//AT2G27460//AT2G37870//ATCHX7//ROPGAP3 GO:0043069 negative regulation of programmed cell d... BP 0.0956660595738358 ATMKK2//AT4G20830//AOC3//ATWRKY40