GOID TERM ONTOLOGY pValue Genes GO:0010089 xylem development BP 0.000379235790181246 AT5G38020//anac058//AtRABA6a//AT1G62770//AtGulLO6 GO:0010087 phloem or xylem histogenesis BP 0.000650103552769305 AT5G38020//anac058//AtRABA6a//AT1G62770//AtGulLO6 GO:0022412 cellular process involved in reproductio... BP 0.002216175862572 AT3G51530//TPR10//DAN1//AT1G51380//POLD2 GO:0007276 gamete generation BP 0.00413831173112806 AT3G51530//TPR10//DAN1//AT1G51380//POLD2 GO:0019953 sexual reproduction BP 0.00677027576463579 AT3G51530//TPR10//DAN1//AT1G51380//POLD2 GO:0009887 organ morphogenesis BP 0.00833956025789541 ATSYTD//FLU//RIP4//LACS2//AGL44//POLD2 GO:0048229 gametophyte development BP 0.00849998021487913 AT3G51530//iPGAM2//TPR10//DAN1//AGL44//AT1G51380//POLD2 GO:0009560 embryo sac egg cell differentiation BP 0.0103916843241293 AT3G51530//TPR10//AT1G51380//POLD2 GO:0007292 female gamete generation BP 0.0113331900676201 AT3G51530//TPR10//AT1G51380//POLD2 GO:0006346 methylation-dependent chromatin silencin... BP 0.0145709084443334 RIP4//CYCB2;4//POLD2 GO:0071900 regulation of protein serine/threonine k... BP 0.0145709084443334 AtPFA-DSP4//CYC2//CYCB2;4 GO:0043549 regulation of kinase activity BP 0.0154210637158734 AtPFA-DSP4//CYC2//CYCB2;4 GO:0045859 regulation of protein kinase activity BP 0.0154210637158734 AtPFA-DSP4//CYC2//CYCB2;4 GO:0001932 regulation of protein phosphorylation BP 0.0172039400343605 AtPFA-DSP4//CYC2//CYCB2;4 GO:0051338 regulation of transferase activity BP 0.0181368174743814 AtPFA-DSP4//CYC2//CYCB2;4 GO:0048856 anatomical structure development BP 0.0182951163697118 ATSYTD//AT4G36390//WPP1//AT5G38020//ATCHIA//Rap2.6L//RBL//AT3G51530//AT3G49560//FLU//anac058//iPGAM2//TPR10//DAN1//CYC2//AtRABA6a//RIP4//CYCB2;4//LACS2//AT1G62770//AtkdsA1//AGL44//AT2G04740//AT1G51380//AtGulLO6//ARSK1//POLD2 GO:0044703 multi-organism reproductive process BP 0.0190479371566592 AT3G51530//TPR10//DAN1//AtkdsA1//AT1G51380//POLD2 GO:0042325 regulation of phosphorylation BP 0.0190974035850287 AtPFA-DSP4//CYC2//CYCB2;4 GO:0006342 chromatin silencing BP 0.0201607381435929 CYC2//RIP4//CYCB2;4//POLD2 GO:0045814 negative regulation of gene expression, ... BP 0.0201607381435929 CYC2//RIP4//CYCB2;4//POLD2 GO:0006259 DNA metabolic process BP 0.0204470975860422 AtMAPR4//AT4G36390//DRT101//DAN1//CYC2//AT1G49590//CYCB2;4//POLD2 GO:0000003 reproduction BP 0.0207740482427659 AT4G36390//AT3G51530//TPR10//DAN1//AGL44//AT1G51380//POLD2 GO:0009561 megagametogenesis BP 0.0215846070658942 AT3G51530//TPR10//AT1G51380//POLD2 GO:0002238 response to molecule of fungal origin BP 0.0217614401976745 AT5G14680//AT1G44760 GO:0006304 DNA modification BP 0.0265997197318333 AT1G49590//CYCB2;4//POLD2 GO:0006305 DNA alkylation BP 0.0265997197318333 AT1G49590//CYCB2;4//POLD2 GO:0006306 DNA methylation BP 0.0265997197318333 AT1G49590//CYCB2;4//POLD2 GO:0044728 DNA methylation or demethylation BP 0.0265997197318333 AT1G49590//CYCB2;4//POLD2 GO:0006655 phosphatidylglycerol biosynthetic proces... BP 0.0302226172672159 AT4G36390//FLU GO:0016458 gene silencing BP 0.032287227711395 CYC2//RIP4//AT1G49590//CYCB2;4//POLD2 GO:0010440 stomatal lineage progression BP 0.0325114593171805 CYC2//CYCB2;4 GO:0046471 phosphatidylglycerol metabolic process BP 0.0325114593171805 AT4G36390//FLU GO:0010583 response to cyclopentenone BP 0.0351858955325575 AT5G38710//Rap2.6L//CYC2//ATGSTU24 GO:0044036 cell wall macromolecule metabolic proces... BP 0.036028076549206 AT5G38020//anac058//AtRABA6a//AtkdsA1//AGL44//AtGulLO6 GO:0031047 gene silencing by RNA BP 0.0392131191910728 RIP4//AT1G49590//CYCB2;4//POLD2 GO:0048609 multicellular organismal reproductive pr... BP 0.0401898148794473 AT3G51530//TPR10//DAN1//AT1G51380//POLD2 GO:0009553 embryo sac development BP 0.0402595508635606 AT3G51530//TPR10//AT1G51380//POLD2 GO:0040029 regulation of gene expression, epigeneti... BP 0.041899933807071 CYC2//RIP4//AT1G49590//CYCB2;4//POLD2 GO:0032504 multicellular organism reproduction BP 0.0436536908780328 AT3G51530//TPR10//DAN1//AT1G51380//POLD2 GO:0031048 chromatin silencing by small RNA BP 0.0475712836784678 CYCB2;4//POLD2 GO:0051567 histone H3-K9 methylation BP 0.0488066082907024 CYC2//CYCB2;4//POLD2 GO:0061647 histone H3-K9 modification BP 0.0488066082907024 CYC2//CYCB2;4//POLD2 GO:0000079 regulation of cyclin-dependent protein s... BP 0.0502872908502841 CYC2//CYCB2;4 GO:0044702 single organism reproductive process BP 0.0516230098377828 AT4G36390//RBL//AT3G51530//AT3G49560//TPR10//DAN1//CYC2//RIP4//AtkdsA1//AGL44//AT2G04740//AT1G51380//POLD2 GO:0006974 cellular response to DNA damage stimulus BP 0.056572995240128 AtMAPR4//DRT101//DAN1//ATNUDT1 GO:0016114 terpenoid biosynthetic process BP 0.0571399797723346 ATSYTD//NDP1//FLU GO:0048527 lateral root development BP 0.0571399797723346 WPP1//LACS2//AGL44 GO:0007049 cell cycle BP 0.0583187377104009 AT4G36390//AT4G32050//AT4G03100//ECT1//CYC2//RIP4//CYCB2;4//AGL44 GO:0032268 regulation of cellular protein metabolic... BP 0.0658835701251824 AT4G32915//AtPFA-DSP4//CYC2//CYCB2;4 GO:0048513 organ development BP 0.0664461388117143 ATSYTD//WPP1//Rap2.6L//RBL//AT3G49560//FLU//RIP4//LACS2//AT1G62770//AGL44//AT2G04740//AtGulLO6//ARSK1//POLD2 GO:0048528 post-embryonic root development BP 0.0717714341740377 WPP1//LACS2//AGL44 GO:0032502 developmental process BP 0.0732787256052783 ATSYTD//AT4G36390//WPP1//AT5G38020//ATCHIA//Rap2.6L//RBL//AT3G51530//AT3G49560//FLU//anac058//iPGAM2//TPR10//DAN1//CYC2//AtRABA6a//RIP4//CYCB2;4//LACS2//AT1G62770//AtkdsA1//AGL44//AT2G04740//AT1G51380//AtGulLO6//ARSK1//POLD2 GO:0032501 multicellular organismal process BP 0.0749323497898628 ATSYTD//AT4G36390//WPP1//ATCHIA//Rap2.6L//RBL//AT3G51530//AT3G49560//FLU//anac058//iPGAM2//TPR10//DAN1//CYC2//RIP4//CYCB2;4//LACS2//AT1G62770//AtkdsA1//AGL44//AT2G04740//AT1G51380//AtGulLO6//ARSK1//POLD2 GO:0006626 protein targeting to mitochondrion BP 0.0756686832369071 ATOXA1//AT5G41970//AT4G00090 GO:0070585 protein localization to mitochondrion BP 0.0756686832369071 ATOXA1//AT5G41970//AT4G00090 GO:0072655 establishment of protein localization to... BP 0.0756686832369071 ATOXA1//AT5G41970//AT4G00090 GO:0006996 organelle organization BP 0.075922599851013 ATSYTD//AT4G36390//ATOXA1//ATHTA1//AT5G41970//VAT1//AT3G49560//AT4G03100//AT4G00090//PEX3-1//TPR10//CYC2//RIP4//CYCB2;4//AGL44//AT2G44870//POLD2 GO:0051246 regulation of protein metabolic process BP 0.0759458906386702 AT4G32915//AtPFA-DSP4//CYC2//CYCB2;4 GO:0048439 flower morphogenesis BP 0.0770193931567901 RIP4//AT2G04740 GO:0007275 multicellular organismal development BP 0.0774979765599762 ATSYTD//AT4G36390//WPP1//ATCHIA//Rap2.6L//RBL//AT3G51530//AT3G49560//FLU//anac058//iPGAM2//TPR10//DAN1//CYC2//RIP4//CYCB2;4//LACS2//AT1G62770//AGL44//AT2G04740//AT1G51380//AtGulLO6//ARSK1//POLD2 GO:0006721 terpenoid metabolic process BP 0.0796581351300201 ATSYTD//NDP1//FLU GO:0048569 post-embryonic organ development BP 0.0796735531383085 WPP1//AT3G49560//LACS2//AGL44//AT2G04740//POLD2 GO:0009888 tissue development BP 0.0805427803570753 ATSYTD//AT5G38020//RBL//anac058//CYC2//AtRABA6a//CYCB2;4//AT1G62770//AGL44//AtGulLO6//ARSK1 GO:0000911 cytokinesis by cell plate formation BP 0.0816868543695979 AT4G03100//CYC2//RIP4 GO:0009886 post-embryonic morphogenesis BP 0.0820257764655191 RIP4//LACS2//AT2G04740//POLD2 GO:0009073 aromatic amino acid family biosynthetic ... BP 0.0834579486483456 AT4G36390//FLU GO:0043648 dicarboxylic acid metabolic process BP 0.0834579486483456 AT5G38710//AGD2 GO:0032506 cytokinetic process BP 0.0858110879451106 AT4G03100//CYC2//RIP4 GO:1902410 mitotic cytokinetic process BP 0.0858110879451106 AT4G03100//CYC2//RIP4 GO:0003006 developmental process involved in reprod... BP 0.0861763746427372 AT4G36390//ATCHIA//RBL//AT3G51530//AT3G49560//TPR10//DAN1//CYC2//RIP4//AtkdsA1//AGL44//AT2G04740//AT1G51380//POLD2 GO:0033044 regulation of chromosome organization BP 0.0867372638937658 ATSYTD//AGL44 GO:0031399 regulation of protein modification proce... BP 0.0879061174850585 AtPFA-DSP4//CYC2//CYCB2;4 GO:0044707 single-multicellular organism process BP 0.0888606712602761 ATSYTD//AT4G36390//WPP1//ATCHIA//Rap2.6L//RBL//AT3G51530//AT3G49560//FLU//anac058//iPGAM2//TPR10//DAN1//CYC2//RIP4//CYCB2;4//LACS2//AT1G62770//AGL44//AT2G04740//AT1G51380//AtGulLO6//ARSK1//POLD2 GO:0007005 mitochondrion organization BP 0.0900227614346061 ATOXA1//AT5G41970//AT4G00090 GO:0046474 glycerophospholipid biosynthetic process BP 0.0900227614346061 AT4G36390//AT3G62920//FLU GO:0009624 response to nematode BP 0.09005495096474 ATCAT6//ABCC4 GO:0019220 regulation of phosphate metabolic proces... BP 0.0921607712581955 AtPFA-DSP4//CYC2//CYCB2;4 GO:0051174 regulation of phosphorus metabolic proce... BP 0.0921607712581955 AtPFA-DSP4//CYC2//CYCB2;4 GO:0051704 multi-organism process BP 0.0931269433861047 ATHTA1//AT5G38710//AT5G14680//ATCAT6//AT3G51530//AGD2//AtPFA-DSP4//TPR10//DAN1//ATLP-3//AT1G44760//LACS2//AtkdsA1//AT1G51380//ABCC4//POLD2 GO:0051276 chromosome organization BP 0.0938711926457401 ATSYTD//ATHTA1//CYC2//RIP4//CYCB2;4//AGL44//POLD2 GO:0000281 mitotic cytokinesis BP 0.0943198962059139 AT4G03100//CYC2//RIP4 GO:0010605 negative regulation of macromolecule met... BP 0.0944591727667018 AtPFA-DSP4//CYC2//RIP4//AT1G49590//CYCB2;4//POLD2 GO:0008299 isoprenoid biosynthetic process BP 0.0948841008324763 ATSYTD//NDP1//FLU//AT2G18620 GO:0061640 cytoskeleton-dependent cytokinesis BP 0.0964998834423722 AT4G03100//CYC2//RIP4 GO:0015824 proline transport BP 0.103685486387321 AT5G59480//ATSGP2 GO:0006553 lysine metabolic process BP 0.10427982404244 308_ GO:0006560 proline metabolic process BP 0.10427982404244 527_ GO:0006829 zinc II ion transport BP 0.10427982404244 462_ GO:0009688 abscisic acid biosynthetic process BP 0.10427982404244 030_ GO:0016106 sesquiterpenoid biosynthetic process BP 0.10427982404244 030_ GO:0043289 apocarotenoid biosynthetic process BP 0.10427982404244 030_ GO:0043650 dicarboxylic acid biosynthetic process BP 0.10427982404244 527_ GO:0052325 cell wall pectin biosynthetic process BP 0.10427982404244 920_ GO:1902645 tertiary alcohol biosynthetic process BP 0.10427982404244 030_ GO:0006633 fatty acid biosynthetic process BP 0.10542333254107 AT5G38020//FLU//LACS2 GO:0000278 mitotic cell cycle BP 0.106062537251034 AT4G32050//AT4G03100//ECT1//CYC2//RIP4 GO:0030154 cell differentiation BP 0.108344571927676 AT3G51530//FLU//TPR10//DAN1//AtkdsA1//AGL44//AT1G51380//ARSK1//POLD2 GO:0022414 reproductive process BP 0.11231505155317 AT4G36390//ATCHIA//RBL//AT3G51530//AT3G49560//TPR10//DAN1//CYC2//RIP4//AtkdsA1//AGL44//AT2G04740//AT1G51380//POLD2 GO:0045017 glycerolipid biosynthetic process BP 0.11232231884813 AT4G36390//AT3G62920//FLU GO:0031324 negative regulation of cellular metaboli... BP 0.113483666902207 AtPFA-DSP4//CYC2//RIP4//CYCB2;4//POLD2