GOID TERM ONTOLOGY pValue Genes GO:0009657 plastid organization BP 0.000784019240278101 ATG4//NDH18//AT5G38520//CaS//ATDEF2//2-Cys//PPL1//AT3G45050//PSAE-1//AT4G02530//ATPREP1//RSY3//FIB4//AT1G44000//TAPX//AT1G21350//PRPL11//GAPA-2//AT1G12800//LQY1//PTAC4//FIONA//PBCP//ZFP8 GO:0019637 organophosphate metabolic process BP 0.00121775897110851 AT4G17360//AT5G09290//B73//ATG4//ATNDPK2//AMK2//AT5G44010//NDH18//AOS//AT5G38520//CaS//ATHD2//ATDEF2//2-Cys//PPL1//MCA1//HCF244//AtFBA5//AT4G02530//AT4G10300//DEG1//RNR2//ATF1//AT1G69070//AT1G55960//PRPL11//AT1G12800//AT1G78040//LQY1//AT2G21385//ATGSTU18//AT2G29300//SSL2//AT2G35390//AT2G45990//5PTase12//SCPL8 GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 0.00125868464425502 ATG4//ATNDPK2//NDH18//AOS//CaS//ATDEF2//2-Cys//PPL1//HCF244//AtFBA5//AT4G02530//AT4G10300//DEG1//ATF1//PRPL11//AT1G12800//AT1G78040//LQY1//AT2G21385//ATGSTU18//SCPL8 GO:0042440 pigment metabolic process BP 0.00252236482449438 AtHBP5//ATG4//ATOMT1//B2//AMK2//ATMYB11//AT3G61080//HCF244//PORB//AtFBA5//AT4G02530//DEG1//ELIP//PRPL11//AT1G12800//AT2G21385//AT1G62250//AT2G35390 GO:0006081 cellular aldehyde metabolic process BP 0.00302375051649049 ATG4//ATNDPK2//NDH18//AOS//CaS//ATDEF2//2-Cys//PPL1//HCF244//ATBCA5//AtFBA5//AT4G02530//AT4G10300//DEG1//ATF1//PRPL11//AT1G12800//AT1G78040//LQY1//AT2G21385//ATGSTU18//SCPL8 GO:0019751 polyol metabolic process BP 0.00318090274970258 AT5G38520//AtGDPD6//AT3G48460//AT1G55960//AT1G78040//AT2G29300//SSL2//AT2G45990//5PTase12 GO:0044281 small molecule metabolic process BP 0.00448213817701145 AT4G17360//ATMGD2//ATG4//ATHDH//ATNDPK2//ATOMT1//B2//AT5G51930//AHG1//AMK2//AT5G45480//AT5G44020//NDH18//AT5G42740//AOS//AT5G38520//CaS//ATHD2//ATDEF2//AGL15//AtGDPD6//2-Cys//AT3G57700//AT3G56060//PPL1//AT3G51660//AT3G48460//AT4G39830//MCA1//HCF244//AT4G34950//KCS17//ATBCA5//DHS2//SQD1//AT4G29650//PSAE-1//PORB//AtFBA5//PyrD//ATSR//DES-1-LIKE//AT4G02530//AT4G10300//CXC750//DEG1//RNR2//ATF1//ATNS2//AT3G03330//AT1G69070//AT1G55260//AT1G55960//AT1G01260//PRPL11//GAPA-2//AT1G12800//KCS3//AT1G78040//LQY1//ABCD2//AT1G09310//AT2G21385//ATGGH2//ATGSTU18//CJD1//AT2G29300//SSL2//FIONA//AT2G35390//AT2G45990//5PTase12//SCPL8//FDH GO:0006090 pyruvate metabolic process BP 0.00468978300375353 ATG4//ATNDPK2//NDH18//AT5G42740//AOS//CaS//ATDEF2//HCF244//AtFBA5//AT4G02530//AT4G10300//ATF1//PRPL11//GAPA-2//AT1G12800//AT1G78040//AT2G21385//SCPL8 GO:0006629 lipid metabolic process BP 0.00592222188388663 AT5G09290//ATSPX1//ATMGD2//AtHBP5//ATG4//AT5G16010//ATNDPK2//ATOMT1//B2//AHG1//AMK2//AT5G44010//NDH18//AOS//CaS//ATDEF2//AGL15//AtGDPD6//AT3G53100//AT3G48460//AT4G39830//MCA1//HCF244//KCS17//SQD1//AT4G26790//AT4G18970//DES-1-LIKE//AT4G02530//AT4G10300//FAD2//ATF1//AT3G03330//ATTIM23-3//AT1G55260//PRPL11//AT1G12800//KCS3//AT2G21385//CJD1//5PTase12//SCPL8//FDH//ATSPX2 GO:0046148 pigment biosynthetic process BP 0.00639162725723344 AtHBP5//ATG4//ATOMT1//B2//AMK2//ATMYB11//HCF244//PORB//AtFBA5//AT4G02530//ELIP//PRPL11//AT1G12800//AT2G21385//AT2G35390 GO:0006534 cysteine metabolic process BP 0.00693037768905693 ATG4//AT5G44020//CaS//MCA1//PSAE-1//PORB//AT1G55260//AT1G12800//AT1G78040//AT1G09310//SCPL8 GO:0019344 cysteine biosynthetic process BP 0.00693037768905693 ATG4//AT5G44020//CaS//MCA1//PSAE-1//PORB//AT1G55260//AT1G12800//AT1G78040//AT1G09310//SCPL8 GO:0009069 serine family amino acid metabolic proce... BP 0.00705037351197994 ATG4//AT5G44020//AOS//CaS//MCA1//PSAE-1//PORB//ATSR//AT1G55260//AT1G12800//AT1G78040//AT1G09310//SCPL8 GO:0090407 organophosphate biosynthetic process BP 0.00753714495875647 AT4G17360//B73//ATG4//ATNDPK2//AT5G44010//NDH18//AOS//AT5G38520//CaS//ATHD2//ATDEF2//MCA1//HCF244//AT4G02530//AT4G10300//RNR2//ATF1//AT1G69070//AT1G55960//PRPL11//AT1G12800//AT2G21385//AT2G29300//SSL2//AT2G35390//AT2G45990//SCPL8 GO:0009668 plastid membrane organization BP 0.00779092630812186 ATG4//NDH18//ATDEF2//2-Cys//AT3G45050//AT4G02530//TAPX//AT1G21350//PRPL11//AT1G12800//PTAC4//PBCP//ZFP8 GO:0010027 thylakoid membrane organization BP 0.00779092630812186 ATG4//NDH18//ATDEF2//2-Cys//AT3G45050//AT4G02530//TAPX//AT1G21350//PRPL11//AT1G12800//PTAC4//PBCP//ZFP8 GO:0009070 serine family amino acid biosynthetic pr... BP 0.00823007119734642 ATG4//AT5G44020//CaS//MCA1//PSAE-1//PORB//AT1G55260//AT1G12800//AT1G78040//AT1G09310//SCPL8 GO:0010218 response to far red light BP 0.00834744615980255 FAR1//CaS//CP12//HCF244//ELIP//ATFD2//ATHB-4 GO:0015994 chlorophyll metabolic process BP 0.00870294409133869 ATG4//AOS//CaS//AT3G61080//PORB//AT4G02530//DEG1//ELIP//PRPL11//AT1G12800//AT1G62250 GO:0044255 cellular lipid metabolic process BP 0.00910344321335099 AT5G09290//ATSPX1//ATMGD2//AtHBP5//ATG4//ATNDPK2//B2//AHG1//AMK2//AT5G44010//NDH18//AOS//CaS//ATDEF2//AGL15//AT4G39830//MCA1//HCF244//KCS17//SQD1//DES-1-LIKE//AT4G02530//AT4G10300//ATF1//AT3G03330//ATTIM23-3//AT1G55260//PRPL11//AT1G12800//KCS3//AT2G21385//CJD1//5PTase12//SCPL8//FDH//ATSPX2 GO:0009637 response to blue light BP 0.00925699077680275 CaS//CP12//HCF244//ATBZIP54//AT3G19850//ELIP//ATFD2//PKS2 GO:0051186 cofactor metabolic process BP 0.0102724947013331 AT4G17360//B73//ATG4//AOS//CaS//2-Cys//AT3G61080//PPL1//PORB//AtFBA5//AT4G02530//DEG1//ELIP//ATF1//PRPL11//AT1G12800//LQY1//ATGGH2//ATGSTU18//AT1G62250//AT2G35390//SCPL8 GO:0006778 porphyrin-containing compound metabolic ... BP 0.0106820276065018 ATG4//AOS//CaS//AT3G61080//PORB//AT4G02530//DEG1//ELIP//PRPL11//AT1G12800//AT1G62250//AT2G35390 GO:0033013 tetrapyrrole metabolic process BP 0.0106820276065018 ATG4//AOS//CaS//AT3G61080//PORB//AT4G02530//DEG1//ELIP//PRPL11//AT1G12800//AT1G62250//AT2G35390 GO:1901564 organonitrogen compound metabolic proces... BP 0.0117288804903797 AT4G17360//B73//ATG4//ATHDH//ATNDPK2//ATOMT1//AT5G45480//AT5G44020//AOS//CaS//ATHD2//2-Cys//AT3G61080//PPL1//AT3G51660//AT4G39830//MCA1//DHS2//AT4G29650//PSAE-1//PORB//AtFBA5//PyrD//ATSR//DES-1-LIKE//AT4G02530//DEG1//RNR2//ELIP//ATF1//ATNS2//AT1G55260//PRPL11//AT1G12800//AT1G78040//LQY1//AT1G09310//ATGGH2//ATGSTU18//AT1G62250//SSL2//FIONA//AT2G35390//SCPL8 GO:0010155 regulation of proton transport BP 0.0130464810838162 AMK2//CP12//AT3G19850//ATFD2//PKS2//PBCP GO:0019288 isopentenyl diphosphate biosynthetic pro... BP 0.0134595964015543 ATG4//ATNDPK2//NDH18//AOS//CaS//ATDEF2//HCF244//AT4G02530//AT4G10300//ATF1//PRPL11//AT1G12800//AT2G21385//SCPL8 GO:0034605 cellular response to heat BP 0.0134974119634758 CP12//ATFKBP62//ELIP GO:0048544 recognition of pollen BP 0.0144665154681646 ATGRP-7//ARK3//AT1G11300//AT1G61500 GO:0009240 isopentenyl diphosphate biosynthetic pro... BP 0.014609398941066 ATG4//ATNDPK2//NDH18//AOS//CaS//ATDEF2//HCF244//AT4G02530//AT4G10300//ATF1//PRPL11//AT1G12800//AT2G21385//SCPL8 GO:0046490 isopentenyl diphosphate metabolic proces... BP 0.014609398941066 ATG4//ATNDPK2//NDH18//AOS//CaS//ATDEF2//HCF244//AT4G02530//AT4G10300//ATF1//PRPL11//AT1G12800//AT2G21385//SCPL8 GO:0046173 polyol biosynthetic process BP 0.0154951427065973 AT5G38520//AT3G48460//AT1G55960//AT2G29300//SSL2//AT2G45990 GO:0043436 oxoacid metabolic process BP 0.0156356427500341 AT4G17360//ATMGD2//ATG4//ATHDH//ATNDPK2//B2//AHG1//AT5G45480//AT5G44020//NDH18//AT5G42740//AOS//AT5G38520//CaS//ATDEF2//AGL15//2-Cys//AT3G57700//AT3G51660//AT4G39830//MCA1//HCF244//AT4G34950//KCS17//ATBCA5//DHS2//SQD1//PSAE-1//PORB//AtFBA5//ATSR//DES-1-LIKE//AT4G02530//AT4G10300//CXC750//DEG1//ATF1//ATNS2//AT3G03330//AT1G55260//AT1G01260//PRPL11//GAPA-2//AT1G12800//KCS3//AT1G78040//ABCD2//AT1G09310//AT2G21385//ATGGH2//CJD1//FIONA//SCPL8//FDH GO:0006631 fatty acid metabolic process BP 0.01583348851021 ATMGD2//B2//AHG1//AOS//CaS//KCS17//DES-1-LIKE//AT4G02530//AT3G03330//AT1G55260//KCS3//CJD1//SCPL8//FDH GO:0006082 organic acid metabolic process BP 0.0158966446124955 AT4G17360//ATMGD2//ATG4//ATHDH//ATNDPK2//B2//AHG1//AT5G45480//AT5G44020//NDH18//AT5G42740//AOS//AT5G38520//CaS//ATDEF2//AGL15//2-Cys//AT3G57700//AT3G51660//AT4G39830//MCA1//HCF244//AT4G34950//KCS17//ATBCA5//DHS2//SQD1//PSAE-1//PORB//AtFBA5//ATSR//DES-1-LIKE//AT4G02530//AT4G10300//CXC750//DEG1//ATF1//ATNS2//AT3G03330//AT1G55260//AT1G01260//PRPL11//GAPA-2//AT1G12800//KCS3//AT1G78040//ABCD2//AT1G09310//AT2G21385//ATGGH2//CJD1//FIONA//SCPL8//FDH GO:0016109 tetraterpenoid biosynthetic process BP 0.0159365280863341 AtHBP5//ATG4//B2//AMK2//HCF244//AT4G02530//AT1G12800//AT2G21385 GO:0016117 carotenoid biosynthetic process BP 0.0159365280863341 AtHBP5//ATG4//B2//AMK2//HCF244//AT4G02530//AT1G12800//AT2G21385 GO:1901135 carbohydrate derivative metabolic proces... BP 0.0161212925835069 AT4G17360//ATSPX1//ATMGD2//ATG4//ATNDPK2//AT5G57500//AT5G44020//NDH18//AOS//AT5G38520//CaS//ATHD2//ATDEF2//2-Cys//PPL1//HCF244//AT4G34950//SQD1//AT4G29650//AtFBA5//AT4G02530//AT4G10300//AtENGase85B//DEG1//RNR2//ATF1//PRPL11//AT1G12800//AT1G78040//LQY1//ABCD2//AT2G21385//ATGSTU18//AT2G35390//SCPL8//ATSPX2 GO:0008037 cell recognition BP 0.016498972066533 ATGRP-7//ARK3//AT1G11300//AT1G61500 GO:0006098 pentose-phosphate shunt BP 0.0169561003168416 ATG4//CaS//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//ATF1//AT1G12800//LQY1//ATGSTU18 GO:0051156 glucose 6-phosphate metabolic process BP 0.0169561003168416 ATG4//CaS//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//ATF1//AT1G12800//LQY1//ATGSTU18 GO:0006733 oxidoreduction coenzyme metabolic proces... BP 0.0175573095219201 ATG4//AOS//CaS//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//ATF1//AT1G12800//LQY1//ATGSTU18//SCPL8 GO:0006739 NADP metabolic process BP 0.0186201525302292 ATG4//CaS//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//ATF1//AT1G12800//LQY1//ATGSTU18 GO:0009875 pollen-pistil interaction BP 0.018701592418426 ATGRP-7//ARK3//AT1G11300//AT1G61500 GO:0055086 nucleobase-containing small molecule met... BP 0.0187668190211833 AT4G17360//ATG4//ATNDPK2//AMK2//AOS//CaS//ATHD2//2-Cys//PPL1//AT4G29650//AtFBA5//AT4G02530//DEG1//RNR2//ATF1//AT1G69070//AT1G12800//LQY1//ATGSTU18//AT2G35390//SCPL8 GO:0016108 tetraterpenoid metabolic process BP 0.0191691515481051 AtHBP5//ATG4//B2//AMK2//HCF244//AT4G02530//AT1G12800//AT2G21385 GO:0016116 carotenoid metabolic process BP 0.0191691515481051 AtHBP5//ATG4//B2//AMK2//HCF244//AT4G02530//AT1G12800//AT2G21385 GO:0006644 phospholipid metabolic process BP 0.0195033474979397 AT5G09290//ATG4//ATNDPK2//AT5G44010//NDH18//AOS//CaS//ATDEF2//MCA1//HCF244//AT4G02530//AT4G10300//ATF1//PRPL11//AT1G12800//AT2G21385//5PTase12//SCPL8 GO:0009117 nucleotide metabolic process BP 0.0218637130655086 AT4G17360//ATG4//ATNDPK2//AMK2//AOS//CaS//ATHD2//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//RNR2//ATF1//AT1G69070//AT1G12800//LQY1//ATGSTU18//AT2G35390//SCPL8 GO:1901566 organonitrogen compound biosynthetic pro... BP 0.0222965709745594 AT4G17360//B73//ATG4//ATHDH//ATNDPK2//AT5G45480//AT5G44020//AOS//CaS//ATHD2//AT3G51660//AT4G39830//MCA1//DHS2//AT4G29650//PSAE-1//PORB//PyrD//DES-1-LIKE//AT4G02530//RNR2//ELIP//AT1G55260//PRPL11//AT1G12800//AT1G78040//AT1G09310//SSL2//AT2G35390//SCPL8 GO:0043647 inositol phosphate metabolic process BP 0.022968623672513 AT5G38520//AT1G55960//AT2G29300//SSL2//AT2G45990//5PTase12 GO:0006753 nucleoside phosphate metabolic process BP 0.0231436179857484 AT4G17360//ATG4//ATNDPK2//AMK2//AOS//CaS//ATHD2//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//RNR2//ATF1//AT1G69070//AT1G12800//LQY1//ATGSTU18//AT2G35390//SCPL8 GO:0046496 nicotinamide nucleotide metabolic proces... BP 0.0233082787257696 ATG4//CaS//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//ATF1//AT1G12800//LQY1//ATGSTU18 GO:0019362 pyridine nucleotide metabolic process BP 0.0243409154713093 ATG4//CaS//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//ATF1//AT1G12800//LQY1//ATGSTU18 GO:0008610 lipid biosynthetic process BP 0.024465182121001 ATSPX1//ATMGD2//AtHBP5//ATG4//ATNDPK2//ATOMT1//B2//AHG1//AMK2//AT5G44010//NDH18//AOS//CaS//ATDEF2//AT4G39830//MCA1//HCF244//KCS17//SQD1//DES-1-LIKE//AT4G02530//AT4G10300//ATF1//ATTIM23-3//PRPL11//AT1G12800//KCS3//AT2G21385//SCPL8//FDH//ATSPX2 GO:0044272 sulfur compound biosynthetic process BP 0.0256891925801602 ATG4//AT5G44020//AOS//AT5G38520//CaS//2-Cys//MCA1//AT4G34950//SQD1//PSAE-1//PORB//DEG1//AT1G55260//AT1G12800//AT1G78040//ABCD2//AT1G09310//SCPL8 GO:0006720 isoprenoid metabolic process BP 0.0258754079168705 AtHBP5//ATG4//ATNDPK2//B2//AHG1//AMK2//NDH18//AOS//CaS//ATDEF2//AGL15//HCF244//AT4G02530//AT4G10300//ATF1//ATTIM23-3//PRPL11//AT1G12800//AT2G21385//SCPL8 GO:0008654 phospholipid biosynthetic process BP 0.0265251935266411 ATG4//ATNDPK2//AT5G44010//NDH18//AOS//CaS//ATDEF2//MCA1//HCF244//AT4G02530//AT4G10300//ATF1//PRPL11//AT1G12800//AT2G21385//SCPL8 GO:0006071 glycerol metabolic process BP 0.0271332598784775 AtGDPD6//AT3G48460//AT1G78040 GO:0072524 pyridine-containing compound metabolic p... BP 0.0288062657380934 ATG4//CaS//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//ATF1//AT1G12800//LQY1//ATGSTU18 GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 0.0289919237224384 AT5G38520//AT1G55960//AT2G29300//SSL2//AT2G45990 GO:0032958 inositol phosphate biosynthetic process BP 0.0289919237224384 AT5G38520//AT1G55960//AT2G29300//SSL2//AT2G45990 GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 0.0289919237224384 AT5G38520//AT1G55960//AT2G29300//SSL2//AT2G45990 GO:0008299 isoprenoid biosynthetic process BP 0.0293290898601315 AtHBP5//ATG4//ATNDPK2//B2//AHG1//AMK2//NDH18//AOS//CaS//ATDEF2//HCF244//AT4G02530//AT4G10300//ATF1//ATTIM23-3//PRPL11//AT1G12800//AT2G21385//SCPL8 GO:0006732 coenzyme metabolic process BP 0.0300758863611151 AT4G17360//B73//ATG4//AOS//CaS//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//ATF1//AT1G12800//LQY1//ATGGH2//ATGSTU18//SCPL8 GO:0000097 sulfur amino acid biosynthetic process BP 0.0312470942218799 ATG4//AT5G44020//CaS//MCA1//PSAE-1//PORB//AT1G55260//AT1G12800//AT1G78040//AT1G09310//SCPL8 GO:0019400 alditol metabolic process BP 0.03135896012249 AtGDPD6//AT3G48460//AT1G78040 GO:0000038 very long-chain fatty acid metabolic pro... BP 0.0323770583455407 KCS17//AT1G55260//KCS3//FDH GO:0019693 ribose phosphate metabolic process BP 0.0330011728253442 AT4G17360//ATG4//ATNDPK2//CaS//ATHD2//2-Cys//PPL1//AtFBA5//AT4G02530//DEG1//RNR2//ATF1//AT1G12800//LQY1//ATGSTU18 GO:0009250 glucan biosynthetic process BP 0.0334371393556611 AT4G17360//CaS//AT3G45050//PORB//AtFBA5//ATCSLG3//AT4G10300//QQS//ATPDI12//ATF1//AT1G12800//ABCD2//CESA09 GO:0071365 cellular response to auxin stimulus BP 0.0356598753374032 B73//ATNDPK2//AGL15//AAR3 GO:0019752 carboxylic acid metabolic process BP 0.0365218198776791 AT4G17360//ATMGD2//ATG4//ATHDH//ATNDPK2//B2//AHG1//AT5G45480//AT5G44020//NDH18//AT5G42740//AOS//CaS//ATDEF2//AGL15//2-Cys//AT3G57700//AT3G51660//AT4G39830//MCA1//HCF244//KCS17//ATBCA5//DHS2//PSAE-1//PORB//AtFBA5//ATSR//DES-1-LIKE//AT4G02530//AT4G10300//CXC750//ATF1//ATNS2//AT3G03330//AT1G55260//AT1G01260//PRPL11//GAPA-2//AT1G12800//KCS3//AT1G78040//AT1G09310//AT2G21385//ATGGH2//CJD1//FIONA//SCPL8//FDH" GO:0010207 photosystem II assembly BP 0.0377846313534446 AT5G38520//CaS//PPL1//HCF244//PSAE-1//ATFD2//GAPA-2//LQY1//AT2G45990//PBCP GO:0006091 generation of precursor metabolites and ... BP 0.0380241824425093 RPL14//AMK2//AT5G42740//AT5G38520//CaS//2-Cys//PPL1//HCF244//PSAE-1//PORB//AtFBA5//AT4G02530//CXC750//DEG1//AOX1A//ATFD2//GAPA-2//AT1G78040//LQY1//OTP51//AT2G45990//PBCP GO:0000096 sulfur amino acid metabolic process BP 0.0390619021583711 ATG4//AT5G44020//AOS//CaS//MCA1//PSAE-1//PORB//AT1G55260//AT1G12800//AT1G78040//AT1G09310//SCPL8 GO:0034660 ncRNA metabolic process BP 0.0396919978774458 ATG4//AT5G38520//CaS//PPL1//HCF244//PSAE-1//AT4G02530//RSY3//ATNS2//PRPL11//GAPA-2//AT1G12800//LQY1//FIONA//PBCP GO:0032787 monocarboxylic acid metabolic process BP 0.0410476200160624 ATMGD2//ATG4//ATNDPK2//B2//AHG1//AT5G45480//AT5G44020//NDH18//AT5G42740//AOS//CaS//ATDEF2//2-Cys//AT3G57700//AT3G51660//AT4G39830//HCF244//KCS17//ATBCA5//AtFBA5//DES-1-LIKE//AT4G02530//AT4G10300//CXC750//ATF1//AT3G03330//AT1G55260//AT1G01260//PRPL11//GAPA-2//AT1G12800//KCS3//AT1G78040//AT2G21385//CJD1//SCPL8//FDH GO:0019684 photosynthesis, light reaction BP 0.041645942769306 AT5G38520//CaS//2-Cys//PPL1//HCF244//PSAE-1//PORB//AT4G02530//CXC750//DEG1//ATFD2//GAPA-2//LQY1//OTP51//AT2G45990//PBCP GO:0006364 rRNA processing BP 0.0456854086514343 ATG4//AT5G38520//CaS//PPL1//HCF244//PSAE-1//AT4G02530//PRPL11//GAPA-2//LQY1//PBCP GO:0016072 rRNA metabolic process BP 0.0456854086514343 ATG4//AT5G38520//CaS//PPL1//HCF244//PSAE-1//AT4G02530//PRPL11//GAPA-2//LQY1//PBCP GO:0006633 fatty acid biosynthetic process BP 0.0457752780805887 B2//AOS//CaS//KCS17//DES-1-LIKE//AT4G02530//KCS3//SCPL8//FDH GO:0009639 response to red or far red light BP 0.0479662260763322 FAR1//ATNDPK2//AHG1//CaS//CP12//ATFUS6//HCF244//ELIP//CDC48C//ATFD2//ATEPR1//ATHB-4 GO:0034470 ncRNA processing BP 0.049575450197722 ATG4//AT5G38520//CaS//PPL1//HCF244//PSAE-1//AT4G02530//RSY3//PRPL11//GAPA-2//LQY1//PBCP GO:0046467 membrane lipid biosynthetic process BP 0.0498196898831072 ATSPX1//ATMGD2//AT4G39830//SQD1//DES-1-LIKE//ATSPX2 GO:0009416 response to light stimulus BP 0.0504587591386952 FAR1//GATA23//ATHDH//ATNDPK2//AHG1//AT5G42740//AOS//CaS//AGL15//CP12//ATFUS6//HCF244//ATBZIP54//XTH3//ATFKBP62//AT3G19850//ELIP//CDC48C//ATFD2//SR45a//KCS3//PKS2//ATUTR3//AT1G54050//AtSDF2//ATEPR1//ATHB-4//PBCP//AT2G19310//FDH GO:0006213 pyrimidine nucleoside metabolic process BP 0.0504902306404809 ATNDPK2//AT4G29650 GO:0009834 plant-type secondary cell wall biogenesi... BP 0.0514525332468117 ANAC066//ANAC073//AtMYB20 GO:0015979 photosynthesis BP 0.0528194842015107 RPL14//AT5G38520//CaS//2-Cys//CP12//PPL1//HCF244//PSAE-1//PORB//AT4G02530//CXC750//DEG1//TAPX//ATFD2//GAPA-2//LQY1//OTP51//AT2G45990//PBCP GO:1901605 alpha-amino acid metabolic process BP 0.0557987279649354 AT4G17360//ATG4//ATHDH//AT5G45480//AT5G44020//AOS//CaS//AT3G51660//MCA1//PSAE-1//PORB//ATSR//AT1G55260//AT1G12800//AT1G78040//AT1G09310//ATGGH2//SCPL8 GO:0016579 protein deubiquitination BP 0.0572464505981037 FAR1//ATFUS6//CDC48C GO:0009644 response to high light intensity BP 0.0581930810710329 CP12//ATFKBP62//ELIP//ATFD2//SR45a//ATUTR3//AT1G54050//AtSDF2//AT2G19310 GO:0006790 sulfur compound metabolic process BP 0.0598845323717606 AT5G09290//ATG4//AT5G44020//AOS//AT5G38520//CaS//2-Cys//MCA1//AT4G34950//SQD1//PSAE-1//PORB//DEG1//ATF1//AT1G55260//AT1G12800//AT1G78040//ABCD2//AT1G09310//SCPL8 GO:0010091 trichome branching BP 0.0602339877514697 GIS//HDG12 GO:0030148 sphingolipid biosynthetic process BP 0.0602339877514697 AT4G39830//DES-1-LIKE GO:2000652 regulation of secondary cell wall biogen... BP 0.0602339877514697 ANAC073//AtMYB20 GO:0006520 cellular amino acid metabolic process BP 0.0602539391146521 AT4G17360//ATG4//ATHDH//AT5G45480//AT5G44020//AOS//CaS//AT3G51660//MCA1//DHS2//PSAE-1//PORB//ATSR//ATNS2//AT1G55260//AT1G12800//AT1G78040//AT1G09310//ATGGH2//FIONA//SCPL8 GO:0019252 starch biosynthetic process BP 0.0617089907169338 AT4G17360//CaS//AT3G45050//PORB//AtFBA5//AT4G10300//QQS//ATF1//AT1G12800//ABCD2 GO:0051049 regulation of transport BP 0.0618917156028237 AMK2//ATUBC8//CP12//AT3G19850//ATFD2//PKS2//PBCP GO:0006811 ion transport BP 0.0646867733543459 AAP2//ATSPX1//HIPP21//HIPP27//AT5G57345//AMK2//KAT1//AT5G45480//AT5G44020//NDH18//CP12//BRH1//CML41//MCA1//AT4G31980//AT4G28890//ATUTR2//AT3G19850//ATFD2//ATGER1//ZIP11//PKS2//ATCHX7//AT2G39210//ATOEP37//PBCP//ATKT1//ATSPX2 GO:0043623 cellular protein complex assembly BP 0.0648945258073222 PFN3//ATUBC8//AT5G38520//CaS//AGD3//PPL1//POR//MCA1//HCF244//PSAE-1//ATRANGAP2//ATFD2//GAPA-2//LQY1//OTP51//AT2G45990//PBCP