GOID TERM ONTOLOGY pValue Genes GO:0019748 secondary metabolic process BP 0.00106621827969264 MGE1//LAC10//Phox4//AAT1//AtOCT4//PBB1//ATMFP2//APM4//AT3G04000//IGMT2//AtGXMT1//MAT3//AT2G36290//ATMST1//BGLU45//AT1G09500//UCC2//ATGSTF7//UGT87A2//LAC3 GO:0048827 phyllome development BP 0.00241502741054392 SAG201//AGL69//AGL68//AT5G60140//AT5G60150//WOX2//TBL17//AT5G22430//AGL25//AT3G62960//AG//ATCUL1//BRL3//ABCB17//RST1//PK3AT//AGO1//AT1G14180//AtRLP29//AGL5//AGL3//AGL9//BOP2//CLF GO:0010048 vernalization response BP 0.00395243380607689 AGL69//AGL68//AGL25//ABCB17//ARR22//AGL3//CLF GO:0009880 embryonic pattern specification BP 0.00459629182579561 WOX2//ATCUL1//RST1//AGO1 GO:0048440 carpel development BP 0.00560246886514407 AGL69//AGL68//AT5G60140//AT5G22430//AGL25//AG//ABCB17//AGL5//AGL3//AGL9 GO:0048467 gynoecium development BP 0.00699392809293238 AGL69//AGL68//AT5G60140//AT5G22430//AGL25//AG//ABCB17//AGL5//AGL3//AGL9 GO:0010072 primary shoot apical meristem specificat... BP 0.00737776867058892 ATCUL1//RST1//anac021//AGO1 GO:0009071 serine family amino acid catabolic proce... BP 0.00883382745177361 AtLCD//ATPME3//ATGSTF7 GO:0044036 cell wall macromolecule metabolic proces... BP 0.00985363272770948 LAC10//AT4G31020//ATXYN1//RST1//AT1G01225//XXT4//AtGXMT1//AT1G23410//AT1G24030//OTS1//AT1G09460//iPGAM1//JP630 GO:0009808 lignin metabolic process BP 0.0100498045888733 LAC10//AtGXMT1//BGLU45//AT1G09500//LAC3 GO:0090421 embryonic meristem initiation BP 0.0110869390809193 ATCUL1//RST1//anac021//AGO1 GO:0048438 floral whorl development BP 0.0132741094487611 AGL69//AGL68//AT5G60140//AT5G60150//AT5G22430//AGL25//AT3G62960//AG//BRL3//ABCB17//AT1G14180//AtRLP29//AGL5//AGL3//AGL9 GO:0009407 toxin catabolic process BP 0.0140511188609408 MGE1//Phox4//AAT1//AtOCT4//PBB1//ATMFP2//APM4//AT3G04000//ATGSTF7//UGT87A2 GO:0090487 secondary metabolite catabolic process BP 0.0140511188609408 MGE1//Phox4//AAT1//AtOCT4//PBB1//ATMFP2//APM4//AT3G04000//ATGSTF7//UGT87A2 GO:0009404 toxin metabolic process BP 0.0175588834106214 MGE1//Phox4//AAT1//AtOCT4//PBB1//ATMFP2//APM4//AT3G04000//ATGSTF7//UGT87A2 GO:0046482 para-aminobenzoic acid metabolic process BP 0.0176436909890609 AtOCT4//AT3G04000//ATCSLE1//GLYI7 GO:0009698 phenylpropanoid metabolic process BP 0.0181371381524583 LAC10//AtGXMT1//MAT3//AT2G36290//BGLU45//AT1G09500//UCC2//LAC3 GO:0010383 cell wall polysaccharide metabolic proce... BP 0.0183317092196663 LAC10//ATXYN1//RST1//XXT4//AtGXMT1//AT1G23410//AT1G24030//OTS1//iPGAM1//JP630 GO:0048443 stamen development BP 0.0201376882126622 AT5G60140//AT3G62960//AG//BRL3//AtRLP29//AGL5//AGL3 GO:0048466 androecium development BP 0.0201376882126622 AT5G60140//AT3G62960//AG//BRL3//AtRLP29//AGL5//AGL3 GO:0048508 embryonic meristem development BP 0.0216636459087588 ATCUL1//RST1//anac021//AGO1 GO:0044710 single-organism metabolic process BP 0.0253262930584943 AT5G12270//ATB'//AT4G16770//AT4G16800//ALDH3H1//AT5G20890//CYP714A1//SDH1-1//ATFLS2//AT5G62650//AT5G58510//AT5G56350//COX15//MGE1//ATERF-5//ATDFA//ATFTB//ATTIP49A//AtNIT4//AT5G14710//AT5G14580//AT5G12260//PYD2//AT5G11840//AtGulLO3//CBSX3//PRX52//ATNAS1//ADK2//LAC10//AtLCD//AT3G55605//CYP71B31//AtRDUF1//LAS1//CYP96A9//IDH-I//FAB1A//Phox4//B1//AAT1//HAP6//AT4G20320//IBR1//ATCUL1//ATXYN1//AT1G16840//AT1G33330//AtOCT4//LBO1//DELTA-VPE//AT3G24180//AT3G28140//PBB1//UKL5//XRCC4//CYP72A7//AT-RSH2//RST1//AT3G15640//AAE13//GLIP4//ATPME3//PAE2//ATMFP2//APM4//AT3G04000//AT3G06340//CYP89A9//AT3G07720//MAP1B//CYP86A4//AT1G12400//ATWHY2//ATPIS//AtMYB114//ATH8//AT2G43480//ATCSLE1//AT1G06250//AT1G07520//IGMT2//ATHDA8//ATCXXS1//AtGXMT1//GLYI7//DHNAT1//AGO1//PGK//TUB1//AT1G23410//AT1G24030//AT-RSH3//AT2G28620//AAO3//MAT3//AT2G36290//ATMST1//ATLUP1//OTS1//AT1G12080//AT1G12010//BGLU45//AT1G09500//iPGAM1//AT1G70180//LPR1//AT1G24310//JP630//AT2G18330//AtXYP2//AtFBA3//AT2G01600//UCC2//CLF//ATGSTF7//UGT87A2//LAC3//APEM3 GO:0035670 plant-type ovary development BP 0.0261592556486257 AGL69//AT5G60140//AT5G22430//AG//AGL5//AGL9 GO:0048481 ovule development BP 0.0261592556486257 AGL69//AT5G60140//AT5G22430//AG//AGL5//AGL9 GO:0048437 floral organ development BP 0.0275719516763363 AGL69//AGL68//AT5G60140//AT5G60150//AT5G22430//AGL25//AT3G62960//AG//BRL3//ABCB17//AT1G14180//AtRLP29//AGL5//AGL3//AGL9//BOP2 GO:0044699 single-organism process BP 0.0285174264866354 SAG201//AT5G12270//ATB'//AT4G16770//AT4G16800//ALDH3H1//ATDAD1//AT5G20890//AT4G36680//ATCAX3//AT5G35090//CYP714A1//APK4//SDH1-1//AGL69//AGL68//ATFLS2//AT5G62650//AT5G60140//AT5G60150//AT5G59740//WOX2//AT5G58640//AT5G58620//AT5G58510//ATGP1//AT5G56350//COX15//MGE1//AT5G53320//TBL17//AtSWEET10//AT5G48430//ATSDAT//ATERF-5//ATDFA//ATFTB//ATTIP49A//AT5G22430//AtNIT4//ATBPM1//AT5G14710//AT5G14580//AT5G12260//PYD2//AT5G11840//AtGulLO3//AT5G10950//CBSX3//AGL25//AtFH19//PRX52//ATNAS1//ADK2//LAC10//AT3G62960//AtLCD//ATEXPB5//AT3G55605//CYP71B31//AT3G48940//AtRDUF1//LAS1//CYP96A9//BSK1//IDH-I//FAB1A//Phox4//RHS16//B1//AAT1//HAP6//AT4G20320//AG//UNE15//AT4G10620//IBR1//ATCUL1//AT4G03010//AT4G02400//AtWRKY47//ATI2//BCD1//ATXYN1//AT1G19160//AT1G16840//AT1G33330//AtOCT4//LBO1//BRL3//DELTA-VPE//AT3G24180//AT3G28140//ATRLP40//ATEHD1//PBB1//UKL5//XRCC4//ABCB17//CYP72A7//AT-RSH2//RST1//AT3G15640//AAE13//GLIP4//ATPME3//PAE2//TIC//ATMFP2//ARR22//APM4//AT3G07890//AT3G08650//AT3G04000//AT3G06340//CYP89A9//AT3G07720//MAP1B//CYP86A4//AT1G12400//AT1G77730//ATWHY2//PK3AT//ABCI17//ATPIS//AT1G73780//AtGIP2//AtMYB114//ANAC018//ATH8//AT2G43480//ATCSLE1//AT1G62330//AT1G06250//AT1G29310//AT1G07520//XXT4//IGMT2//ATHDA8//ATCXXS1//AtGXMT1//GLYI7//anac021//DHNAT1//AGO1//emb1129//AT1G14180//AT1G13160//PGK//TUB1//ANAC020//AT1G23410//AT1G24030//AT-RSH3//ATNAT8//AT2G28620//AAO3//AT2G25350//MAT3//MGP1//AT2G36290//EDA12//AtRLP29//AGL5//AGL3//ATMST1//ATLUP1//OTS1//AT1G12080//AT1G12010//BGLU45//AT1G09500//iPGAM1//AT1G70180//LPR1//AT1G24310//AGL9//AT1G61550//JP630//AT2G20400//AT2G18330//AtXYP2//AtFBA3//emb2410//AT2G37910//AT2G01600//BOP2//UCC2//AT2G34190//CLF//ATGSTF7//UGT87A2//LAC3//APEM3//AtRLP25 GO:0048441 petal development BP 0.02944961876772 AT5G60140//AT5G60150//AG//AT1G14180//AGL5//AGL3 GO:0048465 corolla development BP 0.02944961876772 AT5G60140//AT5G60150//AG//AT1G14180//AGL5//AGL3 GO:0048367 shoot system development BP 0.0323160729743078 SAG201//AGL69//AGL68//AT5G60140//AT5G60150//WOX2//TBL17//ATTIP49A//AT5G22430//AGL25//AT3G62960//AT3G55605//AG//ATCUL1//AT4G02400//BRL3//ABCB17//RST1//PK3AT//anac021//AGO1//AT1G14180//AtRLP29//AGL5//AGL3//AGL9//AT2G18330//BOP2//CLF//UGT87A2 GO:0042752 regulation of circadian rhythm BP 0.034868002652131 AGL25//ATCUL1//TIC GO:0044712 single-organism catabolic process BP 0.0357801342199545 AT5G56350//MGE1//ATFTB//AT5G14710//PYD2//AT5G11840//CBSX3//LAC10//AtLCD//IDH-I//Phox4//AAT1//AT1G16840//AtOCT4//AT3G24180//PBB1//AT3G15640//AAE13//ATPME3//PAE2//ATMFP2//APM4//AT3G04000//MAP1B//PGK//iPGAM1//AtFBA3//ATGSTF7//UGT87A2//LAC3//APEM3 GO:0033865 nucleoside bisphosphate metabolic proces... BP 0.0380327872839414 AT-RSH2//AT-RSH3 GO:0033875 ribonucleoside bisphosphate metabolic pr... BP 0.0380327872839414 AT-RSH2//AT-RSH3 GO:0034032 purine nucleoside bisphosphate metabolic... BP 0.0380327872839414 AT-RSH2//AT-RSH3 GO:0009908 flower development BP 0.0387907871382245 AGL69//AGL68//AT5G60140//AT5G60150//ATTIP49A//AT5G22430//AGL25//AT3G62960//AT3G55605//AG//AT4G02400//BRL3//ABCB17//RST1//AGO1//AT1G14180//AtRLP29//AGL5//AGL3//AGL9//AT2G18330//BOP2//UGT87A2 GO:0009910 negative regulation of flower developmen... BP 0.0389415757743092 AGL69//AGL68//AGL25 GO:0043090 amino acid import BP 0.0398727295666953 AT5G58620//AAT1//ATCUL1//BRL3 GO:0016054 organic acid catabolic process BP 0.0405929694816782 ATFTB//AT5G14710//PYD2//AtLCD//AtOCT4//PBB1//AAE13//ATPME3//PAE2//ATMFP2//APM4//ATGSTF7//APEM3 GO:0046395 carboxylic acid catabolic process BP 0.0405929694816782 ATFTB//AT5G14710//PYD2//AtLCD//AtOCT4//PBB1//AAE13//ATPME3//PAE2//ATMFP2//APM4//ATGSTF7//APEM3 GO:0090567 reproductive shoot system development BP 0.0411020167718697 AGL69//AGL68//AT5G60140//AT5G60150//ATTIP49A//AT5G22430//AGL25//AT3G62960//AT3G55605//AG//AT4G02400//BRL3//ABCB17//RST1//AGO1//AT1G14180//AtRLP29//AGL5//AGL3//AGL9//AT2G18330//BOP2//UGT87A2 GO:0006783 heme biosynthetic process BP 0.0455297295659138 COX15//AT1G33330 GO:0019742 pentacyclic triterpenoid metabolic proce... BP 0.0477770290444033 COX15//LAS1//ATLUP1 GO:0019745 pentacyclic triterpenoid biosynthetic pr... BP 0.0477770290444033 COX15//LAS1//ATLUP1 GO:0072350 tricarboxylic acid metabolic process BP 0.0477770290444033 SDH1-1//ATNAS1//IDH-I GO:2000242 negative regulation of reproductive proc... BP 0.0477770290444033 AGL69//AGL68//AGL25 GO:0048608 reproductive structure development BP 0.0524976283341188 AGL69//AGL68//AT5G60140//AT5G60150//WOX2//ATDFA//ATTIP49A//AT5G22430//AGL25//AT3G62960//AT3G55605//FAB1A//AG//UNE15//ATCUL1//AT4G02400//BRL3//DELTA-VPE//ABCB17//RST1//TIC//PK3AT//anac021//AGO1//emb1129//AT1G14180//AT1G24030//AtRLP29//AGL5//AGL3//ATMST1//OTS1//AGL9//AT2G18330//emb2410//BOP2//CLF//UGT87A2 GO:0061458 reproductive system development BP 0.0524976283341188 AGL69//AGL68//AT5G60140//AT5G60150//WOX2//ATDFA//ATTIP49A//AT5G22430//AGL25//AT3G62960//AT3G55605//FAB1A//AG//UNE15//ATCUL1//AT4G02400//BRL3//DELTA-VPE//ABCB17//RST1//TIC//PK3AT//anac021//AGO1//emb1129//AT1G14180//AT1G24030//AtRLP29//AGL5//AGL3//ATMST1//OTS1//AGL9//AT2G18330//emb2410//BOP2//CLF//UGT87A2 GO:0016104 triterpenoid biosynthetic process BP 0.0525315391802729 COX15//LAS1//ATLUP1 GO:0006546 glycine catabolic process BP 0.0535165585056478 ATPME3//ATGSTF7 GO:0046271 phenylpropanoid catabolic process BP 0.0535165585056478 LAC10//LAC3 GO:0046274 lignin catabolic process BP 0.0535165585056478 LAC10//LAC3 GO:1901068 guanosine-containing compound metabolic ... BP 0.0535165585056478 AT-RSH2//AT-RSH3 GO:0006722 triterpenoid metabolic process BP 0.0575048911921954 COX15//LAS1//ATLUP1 GO:0010410 hemicellulose metabolic process BP 0.0582982640940599 LAC10//ATXYN1//RST1//XXT4//AtGXMT1//AT1G24030//OTS1//JP630 GO:0016126 sterol biosynthetic process BP 0.060067826032148 COX15//LAS1//ATLUP1//AT1G12080//iPGAM1//AtXYP2 GO:0032787 monocarboxylic acid metabolic process BP 0.0602698970194305 AT4G16800//AT5G56350//ATFTB//AT5G14710//PYD2//CBSX3//ATNAS1//AtLCD//IDH-I//B1//AtOCT4//PBB1//AT-RSH2//ATPME3//PAE2//ATMFP2//APM4//AT3G04000//AT3G07720//MAP1B//CYP86A4//ATCSLE1//GLYI7//PGK//AAO3//AtFBA3//ATGSTF7//APEM3 GO:0043473 pigmentation BP 0.0606186751603447 AGL68//AGL25//ABCB17//TUB1//AGL3 GO:0043476 pigment accumulation BP 0.0606186751603447 AGL68//AGL25//ABCB17//TUB1//AGL3 GO:0043478 pigment accumulation in response to UV l... BP 0.0606186751603447 AGL68//AGL25//ABCB17//TUB1//AGL3 GO:0043479 pigment accumulation in tissues in respo... BP 0.0606186751603447 AGL68//AGL25//ABCB17//TUB1//AGL3 GO:0043480 pigment accumulation in tissues BP 0.0606186751603447 AGL68//AGL25//ABCB17//TUB1//AGL3 GO:0043481 anthocyanin accumulation in tissues in r... BP 0.0606186751603447 AGL68//AGL25//ABCB17//TUB1//AGL3 GO:0052541 plant-type cell wall cellulose metabolic... BP 0.061954938336545 AT1G23410//iPGAM1 GO:0016125 sterol metabolic process BP 0.0655676184106146 COX15//LAS1//ATLUP1//AT1G12080//iPGAM1//AtXYP2 GO:0044242 cellular lipid catabolic process BP 0.0655888130109039 ATFTB//AT5G14710//PYD2//AtOCT4//AT3G24180//PBB1//PAE2//ATMFP2//APM4//APEM3 GO:1901565 organonitrogen compound catabolic proces... BP 0.0670292640430648 PYD2//AT5G11840//AtLCD//AT1G16840//AT3G24180//ATPME3//MAT3//ATGSTF7 GO:0045454 cell redox homeostasis BP 0.0671064452284831 AT5G58640//CBSX3//AT3G62960//ATH8//ATCXXS1 GO:0048569 post-embryonic organ development BP 0.0692676353753086 AGL69//AGL68//AT5G60140//AT5G60150//AT5G22430//AGL25//AT3G62960//AG//BRL3//ABCB17//anac021//AT1G14180//AtRLP29//AGL5//AGL3//AGL9//BOP2 GO:0015849 organic acid transport BP 0.0693315913892022 AT5G58620//AT5G56350//TBL17//AT5G48430//ATSDAT//AAT1//ATCUL1//BRL3 GO:0046942 carboxylic acid transport BP 0.0693315913892022 AT5G58620//AT5G56350//TBL17//AT5G48430//ATSDAT//AAT1//ATCUL1//BRL3 GO:0042168 heme metabolic process BP 0.0708084568173402 COX15//AT1G33330 GO:0043624 cellular protein complex disassembly BP 0.0708084568173402 AtFH19//AT1G33330 GO:0009850 auxin metabolic process BP 0.0729491039618992 IBR1//ATPME3//AGO1//ATGSTF7 GO:0048825 cotyledon development BP 0.0729491039618992 WOX2//ATCUL1//RST1//PK3AT GO:0007062 sister chromatid cohesion BP 0.073965550696852 AT5G59740//ATCUL1//RST1//AGO1//AT1G70180 GO:0006635 fatty acid beta-oxidation BP 0.0740803869207535 ATFTB//PYD2//AtOCT4//PBB1//PAE2//ATMFP2//APM4//APEM3 GO:0016042 lipid catabolic process BP 0.0755689366493082 ATFTB//AT5G14710//PYD2//AtOCT4//AT3G24180//PBB1//PAE2//ATMFP2//APM4//APEM3 GO:0007059 chromosome segregation BP 0.0774228542079012 AT5G59740//AT5G12260//ATCUL1//RST1//AGO1//AT1G70180 GO:0010583 response to cyclopentenone BP 0.0774228542079012 MGE1//Phox4//AAT1//AtOCT4//AT3G04000//UGT87A2 GO:0051258 protein polymerization BP 0.0774228542079012 AtFH19//AtGIP2//AT1G62330//AGO1//TUB1//OTS1 GO:0046128 purine ribonucleoside metabolic process BP 0.0775331846556748 SDH1-1//ADK2//AT-RSH2//AT-RSH3//MAT3 GO:0044281 small molecule metabolic process BP 0.0778639986885272 ATB'//AT4G16800//CYP714A1//SDH1-1//AT5G62650//AT5G56350//COX15//ATDFA//ATFTB//AT5G14710//PYD2//AtGulLO3//CBSX3//ATNAS1//ADK2//AtLCD//LAS1//IDH-I//B1//AT4G20320//IBR1//AtOCT4//DELTA-VPE//PBB1//AT-RSH2//AAE13//ATPME3//PAE2//ATMFP2//APM4//AT3G04000//AT3G07720//MAP1B//CYP86A4//ATWHY2//ATH8//ATCSLE1//IGMT2//ATCXXS1//GLYI7//DHNAT1//PGK//AT1G23410//AT-RSH3//AAO3//MAT3//ATMST1//ATLUP1//AT1G12080//iPGAM1//AT1G24310//AT2G18330//AtXYP2//AtFBA3//ATGSTF7//APEM3 GO:0019395 fatty acid oxidation BP 0.0790216438060553 ATFTB//PYD2//AtOCT4//PBB1//PAE2//ATMFP2//APM4//APEM3 GO:0046685 response to arsenic-containing substance BP 0.0794863822825516 ATBXL2//PGK//AT2G25350 GO:0006544 glycine metabolic process BP 0.0800425424701326 ATPME3//ATGSTF7 GO:0032984 macromolecular complex disassembly BP 0.0800425424701326 AtFH19//AT1G33330 GO:0043241 protein complex disassembly BP 0.0800425424701326 AtFH19//AT1G33330 GO:0042278 purine nucleoside metabolic process BP 0.0811920779596628 SDH1-1//ADK2//AT-RSH2//AT-RSH3//MAT3 GO:0006508 proteolysis BP 0.084875105067621 AT5G20890//AT5G56350//AT5G48430//AT5G45120//scpl41//ATTIP49A//ATFTSH6//AT4G22050//ATCUL1//XSP1//AT1G13610//DELTA-VPE//PBB1//UKL5//PAE2//ATMFP2//APM4//MAP1B//TUB1//AT1G23410//SCPL43//MGP1//OTS1 GO:0002679 respiratory burst involved in defense re... BP 0.0854760264696763 ATERF-5//AtRDUF1//AT1G07520 GO:0045730 respiratory burst BP 0.0854760264696763 ATERF-5//AtRDUF1//AT1G07520 GO:0009411 response to UV BP 0.0863606049209585 AGL68//MGE1//AGL25//DREB2//ABCB17//TUB1//AGL3 GO:0055114 oxidation-reduction process BP 0.0872241160209754 AT5G12270//AT4G16770//ALDH3H1//CYP714A1//SDH1-1//ATFLS2//COX15//ATFTB//PYD2//AtGulLO3//PRX52//LAC10//CYP71B31//CYP96A9//IDH-I//B1//AtOCT4//LBO1//PBB1//CYP72A7//PAE2//ATMFP2//APM4//AT3G04000//CYP89A9//CYP86A4//AT2G43480//AAO3//AT1G12010//LPR1//LAC3//APEM3 GO:0009954 proximal/distal pattern formation BP 0.0896243851054034 AGO1//BOP2 GO:0052546 cell wall pectin metabolic process BP 0.0896243851054034 AT1G23410//iPGAM1 GO:0009062 fatty acid catabolic process BP 0.0908563469416643 ATFTB//AT5G14710//PYD2//AtOCT4//PBB1//PAE2//ATMFP2//APM4//APEM3 GO:0034440 lipid oxidation BP 0.0922159586820683 ATFTB//PYD2//AtOCT4//PBB1//PAE2//ATMFP2//APM4//APEM3 GO:0009072 aromatic amino acid family metabolic pro... BP 0.0938306823319376 AtOCT4//ATPME3//AT3G04000//ATCSLE1//GLYI7//ATGSTF7 GO:0010413 glucuronoxylan metabolic process BP 0.0954119404068923 LAC10//ATXYN1//RST1//AtGXMT1//AT1G24030//OTS1//JP630 GO:0045492 xylan biosynthetic process BP 0.0954119404068923 LAC10//ATXYN1//RST1//AtGXMT1//AT1G24030//OTS1//JP630