GOID TERM ONTOLOGY pValue Genes GO:0040029 regulation of gene expression, epigeneti... BP 0.000203806516848525 AtEMF2//ATCBP20//ATSRA1//AT3G51280//AT3G51290//ATSWI3B//AtDRM3//RIP4//SMC3//FAS1//NFD2//MCM5 GO:0019321 pentose metabolic process BP 0.00198825604902006 AT1G63110//AT1G66430//AT1G19600 GO:0043414 macromolecule methylation BP 0.00571575109960329 AtEMF2//ATSRA1//AT5G01230//AT3G51280//AT3G51290//AT3G13160//AtDRM3//NOP56//FAS1//MCM5 GO:0032259 methylation BP 0.00650052708521852 AtEMF2//ATSRA1//AT5G01230//AT3G51280//AT3G51290//AT3G13160//AtDRM3//NOP56//FAS1//MCM5 GO:0006887 exocytosis BP 0.00684623482343767 SEC15A//ATSLY1 GO:0006904 vesicle docking involved in exocytosis BP 0.00684623482343767 SEC15A//ATSLY1 GO:0048278 vesicle docking BP 0.00684623482343767 SEC15A//ATSLY1 GO:0022406 membrane docking BP 0.00803541208608447 SEC15A//ATSLY1 GO:0016568 chromatin modification BP 0.0105808027292232 AtEMF2//ATSRA1//AT3G51280//AT3G51290//ATSWI3B//AT3G13160//RIP4//FAS1//MCM5 GO:0051276 chromosome organization BP 0.0109079374206006 AtEMF2//ATSRA1//AT3G51280//AT3G51290//ATUBP26//ATSWI3B//AT3G13160//HON4//RIP4//SMC3//FAS1//MCM5 GO:0006325 chromatin organization BP 0.0135314771128101 AtEMF2//ATSRA1//AT3G51280//AT3G51290//ATSWI3B//AT3G13160//HON4//RIP4//FAS1//MCM5 GO:0016246 RNA interference BP 0.0146068071481551 ATCBP20//AT3G51290//RIP4//SMC3//NFD2 GO:0006270 DNA replication initiation BP 0.0157906448141182 AT3G51280//FAS1//MCM5 GO:0035194 posttranscriptional gene silencing by RN... BP 0.0173083977991361 ATCBP20//AT3G51290//RIP4//SMC3//NFD2 GO:0016441 posttranscriptional gene silencing BP 0.0187758899913358 ATCBP20//AT3G51290//RIP4//SMC3//NFD2 GO:0006305 DNA alkylation BP 0.0197985588866057 AT3G51280//AT3G51290//AtDRM3//FAS1//MCM5 GO:0006306 DNA methylation BP 0.0197985588866057 AT3G51280//AT3G51290//AtDRM3//FAS1//MCM5 GO:0044728 DNA methylation or demethylation BP 0.020857237769388 AT3G51280//AT3G51290//AtDRM3//FAS1//MCM5 GO:0006304 DNA modification BP 0.0214002193765852 AT3G51280//AT3G51290//AtDRM3//FAS1//MCM5 GO:0007049 cell cycle BP 0.021423473124718 ATPABN1//ATSRA1//AT3G51280//AT3G51290//ATUBP26//RIP4//SMC3//HAP1//AT1G65280//FAS1//MCM5 GO:0019243 methylglyoxal catabolic process to D-lac... BP 0.0223573027679062 AT5G01230//AT4G12130//AT3G24200 GO:0009438 methylglyoxal metabolic process BP 0.0233994595395175 AT5G01230//AT4G12130//AT3G24200 GO:0042182 ketone catabolic process BP 0.0233994595395175 AT5G01230//AT4G12130//AT3G24200 GO:0051596 methylglyoxal catabolic process BP 0.0233994595395175 AT5G01230//AT4G12130//AT3G24200 GO:0006338 chromatin remodeling BP 0.0243347328326013 ATSWI3B//FAS1 GO:0032940 secretion by cell BP 0.0243347328326013 SEC15A//ATSLY1 GO:0046903 secretion BP 0.0243347328326013 SEC15A//ATSLY1 GO:0006089 lactate metabolic process BP 0.0255619190543423 AT5G01230//AT4G12130//AT3G24200 GO:1902589 single-organism organelle organization BP 0.0265517808433088 TPR16//DG1//AtEMF2//AtAUG3//ATSRA1//AT3G51280//AT3G51290//ATUBP26//AT3G13160//AT3G06480//RIP4//SMC3//HAP1//MCM5 GO:0046185 aldehyde catabolic process BP 0.0266821879650389 AT5G01230//AT4G12130//AT3G24200 GO:0016571 histone methylation BP 0.0326962010477113 AtEMF2//ATSRA1//AT3G51280//AT3G51290//AT3G13160//MCM5 GO:0043412 macromolecule modification BP 0.0329988527049659 TPR16//AT5G11020//AT5G58610//AtEMF2//ATPABN1//ATCBP20//AT5G18610//ATSRA1//AT5G01230//AT3G51280//AT3G51290//AT3G49810//ATUBP26//PAM68//AT3G13160//AtDRM3//AT3G06340//AKIN10//AT1G63110//AT1G49580//NOP56//AT1G75640//AT1G70430//FAS1//MCM5 GO:0016458 gene silencing BP 0.0346324803986746 ATCBP20//ATSRA1//AT3G51290//RIP4//SMC3//FAS1//NFD2 GO:0006479 protein methylation BP 0.0371140383030805 AtEMF2//ATSRA1//AT3G51280//AT3G51290//AT3G13160//MCM5 GO:0008213 protein alkylation BP 0.0371140383030805 AtEMF2//ATSRA1//AT3G51280//AT3G51290//AT3G13160//MCM5 GO:0031047 gene silencing by RNA BP 0.0391194919445052 ATCBP20//AT3G51290//RIP4//SMC3//FAS1//NFD2 GO:0003006 developmental process involved in reprod... BP 0.0409505598129642 TPR16//EMB161//DG1//AT5G66230//ABCA12//AtEMF2//ATSRA1//AT3G58580//SEC15A//AT3G51290//ATUBP26//ATSWI3B//ATECP31//AT3G13160//AKIN10//RIP4//ASE1//HAP1//PIN6//MCM5 GO:0071103 DNA conformation change BP 0.0421355010067635 HON4//FAS1//MCM5 GO:0034968 histone lysine methylation BP 0.0464835739997958 ATSRA1//AT3G51280//AT3G51290//AT3G13160//MCM5 GO:0018022 peptidyl-lysine methylation BP 0.0473810650925643 ATSRA1//AT3G51280//AT3G51290//AT3G13160//MCM5 GO:0042398 cellular modified amino acid biosyntheti... BP 0.0474440840454978 AT5G66230//AT3G17100 GO:0008283 cell proliferation BP 0.0482888574777619 AT5G66230//AT3G51280//ELP6//FAS1//MCM5 GO:0006261 DNA-dependent DNA replication BP 0.0501979795134546 EMB161//AT3G51280//FAS1//MCM5 GO:0018205 peptidyl-lysine modification BP 0.0517856505391607 TPR16//ATSRA1//AT3G51280//AT3G51290//AT3G13160//MCM5 GO:0016569 covalent chromatin modification BP 0.0523559049902279 AtEMF2//ATSRA1//AT3G51280//AT3G51290//AT3G13160//RIP4//MCM5 GO:0022414 reproductive process BP 0.0549822952726982 TPR16//EMB161//DG1//AT5G66230//ABCA12//AtEMF2//ATSRA1//AT3G58580//SEC15A//AT3G51290//ATUBP26//ATSWI3B//ATECP31//AT3G13160//AKIN10//RIP4//ASE1//HAP1//PIN6//MCM5 GO:0048831 regulation of shoot system development BP 0.055939286304626 AtEMF2//AT3G51290//ATUBP26//ELP6//AT3G13160//MCM5 GO:0000278 mitotic cell cycle BP 0.0560300259143004 ATPABN1//AT3G51290//RIP4//HAP1//AT1G65280//FAS1//MCM5 GO:0051225 spindle assembly BP 0.0582465313396178 ATSRA1//AT3G51290 GO:0010608 posttranscriptional regulation of gene e... BP 0.0599880872370705 ATCBP20//AT3G51290//RIP4//SMC3//NFD2 GO:2000026 regulation of multicellular organismal d... BP 0.0609115067645282 AtEMF2//AT3G51290//ATUBP26//ELP6//AT3G13160//AT1G26530//AT1G49580//FAS1//MCM5 GO:0007051 spindle organization BP 0.0610688114899065 ATSRA1//AT3G51290 GO:0051567 histone H3-K9 methylation BP 0.063801821758486 ATSRA1//AT3G51280//AT3G51290//MCM5 GO:0061647 histone H3-K9 modification BP 0.063801821758486 ATSRA1//AT3G51280//AT3G51290//MCM5 GO:0048868 pollen tube development BP 0.066464453181148 ABCA12//ATSRA1//SEC15A//HAP1 GO:0006366 transcription from RNA polymerase II pro... BP 0.0668502508551305 ATCBP20//STG1 GO:0070925 organelle assembly BP 0.0668502508551305 ATSRA1//AT3G51290 GO:0051239 regulation of multicellular organismal p... BP 0.0719619783093885 AtEMF2//AT3G51290//ATUBP26//ELP6//AT3G13160//AT1G26530//AT1G49580//FAS1//MCM5 GO:0016570 histone modification BP 0.0745291656843422 AtEMF2//ATSRA1//AT3G51280//AT3G51290//AT3G13160//MCM5 GO:0035196 production of miRNAs involved in gene si... BP 0.0776634707134661 ATCBP20//SMC3//NFD2 GO:0006575 cellular modified amino acid metabolic p... BP 0.0789258072044608 AT5G66230//AT3G17100 GO:0000394 RNA splicing, via endonucleolytic cleava... BP 0.0796045839673369 PSL4//ATCBP20//STG1 GO:0051726 regulation of cell cycle BP 0.0827797268249872 AT3G51280//ATUBP26//AT1G65280//FAS1//MCM5 GO:0010026 trichome differentiation BP 0.0835500453093304 TPR16//ATSRA1//FAS1 GO:0006457 protein folding BP 0.0836309467289534 TPR16//AT3G06340//AT1G65280//AT2G33735 GO:0018193 peptidyl-amino acid modification BP 0.0839256443242184 TPR16//ATSRA1//AT3G51280//AT3G51290//AT3G13160//MCM5 GO:0009799 specification of symmetry BP 0.0855539589781166 RIP4//AT1G26530//PIN6 GO:0009855 determination of bilateral symmetry BP 0.0855539589781166 RIP4//AT1G26530//PIN6 GO:0035195 gene silencing by miRNA BP 0.0855539589781166 ATCBP20//SMC3//NFD2 GO:0006334 nucleosome assembly BP 0.0883934984541287 HON4//FAS1 GO:0034728 nucleosome organization BP 0.0883934984541287 HON4//FAS1 GO:0065004 protein-DNA complex assembly BP 0.0916215914870601 HON4//FAS1 GO:0071824 protein-DNA complex subunit organization BP 0.0916215914870601 HON4//FAS1 GO:0030422 production of siRNA involved in RNA inte... BP 0.0916877770211617 ATCBP20//SMC3//NFD2 GO:0031050 dsRNA fragmentation BP 0.0958764655100604 ATCBP20//SMC3//NFD2 GO:0043331 response to dsRNA BP 0.0958764655100604 ATCBP20//SMC3//NFD2 GO:0070918 production of small RNA involved in gene... BP 0.0958764655100604 ATCBP20//SMC3//NFD2 GO:0071359 cellular response to dsRNA BP 0.0958764655100604 ATCBP20//SMC3//NFD2 GO:0009892 negative regulation of metabolic process BP 0.0963436363976009 ATCBP20//ATSRA1//AT3G51290//ELP6//RIP4//SMC3//FAS1//NFD2 GO:0042180 cellular ketone metabolic process BP 0.0979999664208526 AT5G01230//AT4G12130//AT3G24200 GO:0006464 cellular protein modification process BP 0.0981350431379518 TPR16//AT5G11020//AT5G58610//AtEMF2//ATPABN1//ATCBP20//AT5G18610//ATSRA1//AT3G51280//AT3G51290//AT3G49810//ATUBP26//AT3G13160//AT3G06340//AKIN10//AT1G63110//AT1G49580//AT1G75640//AT1G70430//MCM5 GO:0036211 protein modification process BP 0.0981350431379518 TPR16//AT5G11020//AT5G58610//AtEMF2//ATPABN1//ATCBP20//AT5G18610//ATSRA1//AT3G51280//AT3G51290//AT3G49810//ATUBP26//AT3G13160//AT3G06340//AKIN10//AT1G63110//AT1G49580//AT1G75640//AT1G70430//MCM5 GO:0022402 cell cycle process BP 0.0994180906559688 ATSRA1//AT3G51290//ATUBP26//RIP4//SMC3//HAP1//MCM5 GO:0010629 negative regulation of gene expression BP 0.100478093794691 ATCBP20//ATSRA1//AT3G51290//RIP4//SMC3//FAS1//NFD2 GO:0005986 sucrose biosynthetic process BP 0.101085529055993 107_ GO:0006083 acetate metabolic process BP 0.101085529055993 107_ GO:0009306 protein secretion BP 0.101085529055993 822_ GO:0010411 xyloglucan metabolic process BP 0.101085529055993 721_ GO:0009856 pollination BP 0.101094391323514 ABCA12//ATSRA1//SEC15A//HAP1 GO:0044706 multi-multicellular organism process BP 0.101094391323514 ABCA12//ATSRA1//SEC15A//HAP1 GO:0009909 regulation of flower development BP 0.109564855969811 AtEMF2//AT3G51290//ATUBP26//AT3G13160//MCM5 GO:0009593 detection of chemical stimulus BP 0.110619612037826 319_ GO:0031507 heterochromatin assembly BP 0.110619612037826 630_ GO:0070828 heterochromatin organization BP 0.110619612037826 630_ GO:0009933 meristem structural organization BP 0.111279517234428 ATUBP26//AT1G26530//FAS1//PIN6 GO:0048532 anatomical structure arrangement BP 0.113020512967834 ATUBP26//AT1G26530//FAS1//PIN6 GO:0006275 regulation of DNA replication BP 0.115656807683638 AT3G51280//FAS1//MCM5 GO:0031497 chromatin assembly BP 0.118592253072755 HON4//FAS1 GO:0006349 regulation of gene expression by genetic... BP 0.120053555420952 438_ GO:0009934 regulation of meristem structural organi... BP 0.120053555420952 630_