GOID TERM ONTOLOGY pValue Genes GO:0006875 cellular metal ion homeostasis BP 0.00363895233927523 ATFER2//AT3G22910//AT-PHH1//ATFER4 GO:0098771 inorganic ion homeostasis BP 0.00457294702364126 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4 GO:0046916 cellular transition metal ion homeostasi... BP 0.00587155712562905 ATFER2//AT3G22910//ATFER4 GO:0001101 response to acid chemical BP 0.00740146585251161 RCA//AT1G73480//AT5G65300//ATCOL5//Rap2.6L//AT5G07080//AT5G06980//GATL2//AT3G47480//AtGRF2//ATCBF3//AT3G12320//ATFER2//AtRLP33//CAD1//AtRAV2//AtMYB113//ATWRKY65//AT1G34420//AT-PHH1//RGA//ATPP2-A3//ATWRKY25 GO:0015706 nitrate transport BP 0.00973566030675014 AT5G07080//AtRAV2//UNE2//NRT1.7//ATWRKY65//ATPP2-A3 GO:0009692 ethylene metabolic process BP 0.00981574848754829 AT5G65300//AT5G46080//AtCAF1a//AT4G11300//AT3G10930 GO:0009693 ethylene biosynthetic process BP 0.00981574848754829 AT5G65300//AT5G46080//AtCAF1a//AT4G11300//AT3G10930 GO:0043449 cellular alkene metabolic process BP 0.00981574848754829 AT5G65300//AT5G46080//AtCAF1a//AT4G11300//AT3G10930 GO:0043450 alkene biosynthetic process BP 0.00981574848754829 AT5G65300//AT5G46080//AtCAF1a//AT4G11300//AT3G10930 GO:1900673 olefin metabolic process BP 0.00981574848754829 AT5G65300//AT5G46080//AtCAF1a//AT4G11300//AT3G10930 GO:1900674 olefin biosynthetic process BP 0.00981574848754829 AT5G65300//AT5G46080//AtCAF1a//AT4G11300//AT3G10930 GO:0055065 metal ion homeostasis BP 0.0110339234742214 ATFER2//AT3G22910//AT-PHH1//ATFER4 GO:0015698 inorganic anion transport BP 0.0127482238994171 AtGDPD2//AT5G07080//AtRAV2//UNE2//NRT1.7//ATWRKY65//ATPP2-A3 GO:0045489 pectin biosynthetic process BP 0.016747191818029 OSU1//AT1G44830 GO:0019725 cellular homeostasis BP 0.0167566417588961 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4//BON3//ACHT4 GO:0055076 transition metal ion homeostasis BP 0.0180910175442557 ATFER2//AT3G22910//ATFER4 GO:0071705 nitrogen compound transport BP 0.021181824601445 AT5G58620//AT5G48420//AT5G07080//ATPTR5//CML41//ATMYB87//AtRAV2//UNE2//NRT1.7//ATWRKY65//AT1G24530//ATPP2-A3 GO:0042743 hydrogen peroxide metabolic process BP 0.0215865913769846 RCA//AT3G47480//FAB1A//AtRLP33//CAD1//AT-PHH1//RGA GO:0031537 regulation of anthocyanin metabolic proc... BP 0.022091828422051 AT5G38320//AtMYB113 GO:0006826 iron ion transport BP 0.022262390052218 ATFER2//ATWRKY65//ATFER4//ATPP2-A3 GO:0030003 cellular cation homeostasis BP 0.0228873282170154 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4 GO:0018958 phenol-containing compound metabolic pro... BP 0.0240099253768925 RCA//AT5G24210//AT3G47480//CAD1//AT1G34420//AHA10 GO:0009725 response to hormone BP 0.0255612160602102 RCA//AT1G73480//AT5G65300//Rap2.6L//AT5G06980//ABCB29//GATL2//AT3G47480//AtCAF1a//AtGRF2//ATCBF3//APRR2//AT3G12320//ATFER2//AT3G12830//AtRLP33//CAD1//AtMYB113//OSU1//AT1G24530//RGA GO:0006857 oligopeptide transport BP 0.0255716102116577 ATPTR5//ATMYB87//NRT1.7//AT1G24530 GO:0015833 peptide transport BP 0.0255716102116577 ATPTR5//ATMYB87//NRT1.7//AT1G24530 GO:0008219 cell death BP 0.0260118145762211 RCA//AT5G41400//AT3G53810//AT3G47480//ATMLO1//RPM1//AtRLP33//CAD1//BON3//ATWRKY25 GO:0016265 death BP 0.0260118145762211 RCA//AT5G41400//AT3G53810//AT3G47480//ATMLO1//RPM1//AtRLP33//CAD1//BON3//ATWRKY25 GO:0031323 regulation of cellular metabolic process BP 0.0260198451407308 RCA//DEAR3//AT5G58620//ATCOL5//OVA6//Rap2.6L//ANAC066//ATBZIP24//AT3G47480//CDF3//AT4G39780//CYCD5;1//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//CAD1//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATSRP3//ATTBP2//RGA//ATWRKY25 GO:0006873 cellular ion homeostasis BP 0.0264220064456544 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4 GO:0055072 iron ion homeostasis BP 0.0280413358029912 ATFER2//ATFER4 GO:1901700 response to oxygen-containing compound BP 0.028249813667797 RCA//AT1G73480//AT5G65300//ATCOL5//Rap2.6L//AT5G07080//AT5G06980//GATL2//AT3G49790//AT3G47480//AtCAF1a//AtGRF2//ATCBF3//AT3G12320//ATFER2//AT3G10930//AT3G15630//AtRLP33//CAD1//AtRAV2//AtMYB113//ATWRKY65//AT1G34420//AT-PHH1//ATFER4//AT1G24530//RGA//ATPP2-A3//ATWRKY25 GO:0033554 cellular response to stress BP 0.0288495045441945 RCA//ATCOL5//AT5G41400//AtGDPD2//Rap2.6L//AT3G54100//AT3G53810//ATBZIP24//AT3G47480//RPM1//AtRLP33//CAD1//ATWRKY65//PER4//ATSRP3//AT-PHH1//ATPP2-A3//ATWRKY25 GO:0042886 amide transport BP 0.0291621201092775 ATPTR5//ATMYB87//NRT1.7//AT1G24530 GO:0055082 cellular chemical homeostasis BP 0.0292902072113076 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4 GO:0042537 benzene-containing compound metabolic pr... BP 0.0311569806390549 RCA//AT5G24210//Rap2.6L//AT3G47480//CAD1//AT1G34420 GO:0060548 negative regulation of cell death BP 0.0313076925631516 AT3G53810//AT3G47480//CAD1//BON3//ATWRKY25 GO:0072593 reactive oxygen species metabolic proces... BP 0.0339921197016328 RCA//AT3G47480//FAB1A//AtRLP33//CAD1//AT-PHH1//RGA GO:2000377 regulation of reactive oxygen species me... BP 0.0344941768899636 RCA//AT3G47480//AtRLP33//CAD1//RGA GO:0072503 cellular divalent inorganic cation homeo... BP 0.0380085998202693 AT3G22910//AT-PHH1 GO:0000041 transition metal ion transport BP 0.0390459294286619 AT5G43520//ATFER2//ATWRKY65//ATFER4//ATPP2-A3 GO:0050794 regulation of cellular process BP 0.0407171537088713 RCA//DEAR3//AT5G65300//AT5G58620//ATCOL5//OVA6//AT5G46450//AtPP2-A6//AT5G41400//AT5G38340//Rap2.6L//ABCB29//ANAC066//AT3G54100//AT3G53810//ATBZIP24//AT3G47480//CDF3//AtCAF1a//AT4G39780//CYCD5;1//AtGRF2//ATMYB87//FAB1A//ATCBF3//APRR2//ATMYB67//ANX1//AtRLP33//CAD1//AT1G69570//AtRLP14//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G34420//AT1G44830//ATSRP3//AT1G72850//BON3//ACHT4//ATTBP2//RGA//ATWRKY25 GO:0055080 cation homeostasis BP 0.0426897748604008 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4 GO:0009719 response to endogenous stimulus BP 0.044630991871539 RCA//AT1G73480//AT5G65300//Rap2.6L//AT5G06980//ABCB29//GATL2//AT3G47480//AtCAF1a//AtGRF2//ATCBF3//APRR2//AT3G12320//ATFER2//AT3G10930//AT3G12830//AtRLP33//CAD1//AtRAV2//AtMYB113//OSU1//AT1G24530//RGA GO:0072507 divalent inorganic cation homeostasis BP 0.0452912475612037 AT3G22910//AT-PHH1 GO:0065007 biological regulation BP 0.0479037568327059 RCA//DEAR3//AT5G65300//AT5G58620//ATCOL5//OVA6//AT5G46450//AtPP2-A6//AT5G41400//AT5G38320//AT5G38340//Rap2.6L//ABCB29//ANAC066//AT3G54100//AT3G53810//ATBZIP24//AT3G47480//CDF3//AtCAF1a//AT4G39780//CYCD5;1//AtGRF2//ATMYB87//FAB1A//ATCBF3//LSH9//APRR2//SKU5//ATFER2//AT3G22910//ATMYB67//ANX1//AtRLP33//CAD1//AT1G69570//AtRLP14//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G34420//AT1G44830//ATSRP3//AT1G72850//AHA10//ATPUB18//AT-PHH1//ATFER4//BON3//ACHT4//ATTBP2//RGA//ATWRKY25 GO:0042221 response to chemical BP 0.0491016519486136 RCA//AT1G73480//AT5G65300//EXL2//ATCOL5//AT5G24210//Rap2.6L//AT5G07080//AT5G06980//ABCB29//AT3G54100//ATBZIP24//GATL2//AT3G49790//AT3G47480//AtCAF1a//AtGRF2//ATCBF3//APRR2//AT3G12320//ATFER2//AT3G10930//AT3G12830//AT3G15630//AtRLP33//CAD1//AtRAV2//AtMYB113//OSU1//ATWRKY65//AT1G34420//PER4//AT-PHH1//ATFER4//AT1G24530//RGA//ATPP2-A3//ATWRKY25 GO:0009617 response to bacterium BP 0.04916686280932 RCA//AT5G24210//NHL3//AT3G47480//AtCAF1a//AtRLP33//CAD1//ATPP2-A3//ATWRKY25 GO:0046189 phenol-containing compound biosynthetic ... BP 0.0519675062828304 RCA//AT5G24210//AT3G47480//AT1G34420//AHA10 GO:0009626 plant-type hypersensitive response BP 0.0526883717414505 RCA//AT5G41400//AT3G53810//AT3G47480//RPM1//AtRLP33//CAD1//ATWRKY25 GO:0010033 response to organic substance BP 0.0534928036866587 RCA//AT1G73480//AT5G65300//AT5G24210//Rap2.6L//AT5G06980//ABCB29//AT3G54100//ATBZIP24//GATL2//AT3G49790//AT3G47480//AtCAF1a//AtGRF2//ATCBF3//APRR2//AT3G12320//ATFER2//AT3G10930//AT3G12830//AT3G15630//AtRLP33//CAD1//AtRAV2//AtMYB113//OSU1//AT1G34420//AT1G24530//RGA//ATWRKY25 GO:0009863 salicylic acid mediated signaling pathwa... BP 0.0535940680725473 RCA//AT3G47480//AtRLP33//CAD1//AT1G34420//RGA//ATWRKY25 GO:0010941 regulation of cell death BP 0.0536488231213177 RCA//AT5G41400//AT3G53810//AT3G47480//AtRLP33//CAD1//BON3//ATWRKY25 GO:0034050 host programmed cell death induced by sy... BP 0.0536488231213177 RCA//AT5G41400//AT3G53810//AT3G47480//RPM1//AtRLP33//CAD1//ATWRKY25 GO:0009696 salicylic acid metabolic process BP 0.0548187798345183 RCA//AT5G24210//AT3G47480//CAD1//AT1G34420 GO:0071446 cellular response to salicylic acid stim... BP 0.0557666465080713 RCA//AT3G47480//AtRLP33//CAD1//AT1G34420//RGA//ATWRKY25 GO:0002237 response to molecule of bacterial origin BP 0.0562118309546187 AT5G24210//AT3G47480//ATWRKY25 GO:0006355 regulation of transcription, DNA-templat... BP 0.0569059673689903 DEAR3//AT5G58620//ATCOL5//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATTBP2//RGA//ATWRKY25 GO:1903506 regulation of nucleic acid-templated tra... BP 0.0569059673689903 DEAR3//AT5G58620//ATCOL5//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATTBP2//RGA//ATWRKY25 GO:2001141 regulation of RNA biosynthetic process BP 0.0569059673689903 DEAR3//AT5G58620//ATCOL5//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATTBP2//RGA//ATWRKY25 GO:0031348 negative regulation of defense response BP 0.0578304950651487 RCA//AT3G47480//AtRLP33//CAD1//AT1G34420//ATWRKY25 GO:0080090 regulation of primary metabolic process BP 0.0585884790557065 DEAR3//AT5G58620//ATCOL5//AT5G41400//AT5G38320//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//CYCD5;1//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATSRP3//ATTBP2//RGA//ATWRKY25 GO:0051252 regulation of RNA metabolic process BP 0.0589129343221484 DEAR3//AT5G58620//ATCOL5//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATTBP2//RGA//ATWRKY25 GO:0019751 polyol metabolic process BP 0.0604416998635341 AtGDPD2//AT5G06980//AT3G12320//AT1G17340 GO:0050801 ion homeostasis BP 0.0607890901876048 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4 GO:0007033 vacuole organization BP 0.0612212669631404 FAB1A//AHA10 GO:0009718 anthocyanin-containing compound biosynth... BP 0.0612212669631404 AT5G38320//AtMYB113 GO:0042538 hyperosmotic salinity response BP 0.0623402799327487 AT1G73480//ATBZIP24//ATCBF3//RGA GO:0019222 regulation of metabolic process BP 0.0632191613746253 RCA//DEAR3//AT5G58620//ATCOL5//OVA6//AT5G41400//AT5G38320//Rap2.6L//ANAC066//ATBZIP24//AT3G47480//CDF3//AT4G39780//CYCD5;1//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//CAD1//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATSRP3//ATTBP2//RGA//ATWRKY25 GO:0006820 anion transport BP 0.063730710515489 AT5G58620//AtGDPD2//AT5G07080//CML41//AtRAV2//UNE2//NRT1.7//ATWRKY65//ATPP2-A3 GO:0048585 negative regulation of response to stimu... BP 0.065002769088962 RCA//AT3G47480//AtRLP33//CAD1//AT1G34420//RGA//ATWRKY25 GO:0009889 regulation of biosynthetic process BP 0.0671319859306443 DEAR3//AT5G58620//ATCOL5//AT5G41400//AT5G38320//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATTBP2//RGA//ATWRKY25 GO:0007623 circadian rhythm BP 0.0682231557533407 ATCBF3//APRR2//AT3G12320//AT-PHH1 GO:0048511 rhythmic process BP 0.0682231557533407 ATCBF3//APRR2//AT3G12320//AT-PHH1 GO:0009627 systemic acquired resistance BP 0.0712216057879277 RCA//AT5G24210//AT3G47480//AtRLP33//CAD1//AT1G34420//ATWRKY25 GO:1901615 organic hydroxy compound metabolic proce... BP 0.0734392000972988 RCA//AtGDPD2//AT5G24210//AT5G06980//AT3G47480//AT3G12320//AT3G06470//CAD1//AT1G17340//AT1G34420//AHA10 GO:0006754 ATP biosynthetic process BP 0.0742280216252043 AT3G22910//AHA10 GO:0009142 nucleoside triphosphate biosynthetic pro... BP 0.0742280216252043 AT3G22910//AHA10 GO:0009145 purine nucleoside triphosphate biosynthe... BP 0.0742280216252043 AT3G22910//AHA10 GO:0009201 ribonucleoside triphosphate biosynthetic... BP 0.0742280216252043 AT3G22910//AHA10 GO:0009206 purine ribonucleoside triphosphate biosy... BP 0.0742280216252043 AT3G22910//AHA10 GO:0042592 homeostatic process BP 0.0751182312257223 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4//BON3//ACHT4 GO:0031347 regulation of defense response BP 0.0774049436667634 RCA//AT5G41400//AT3G53810//AT3G47480//AtRLP33//CAD1//AT1G34420//BON3//ATWRKY25 GO:0048583 regulation of response to stimulus BP 0.0782313316205306 RCA//AT5G41400//ABCB29//AT3G53810//AT3G47480//AtRLP33//CAD1//AT1G34420//BON3//RGA//ATWRKY25 GO:0009751 response to salicylic acid BP 0.078882889124144 RCA//Rap2.6L//AT3G47480//AtRLP33//CAD1//AT1G34420//RGA//ATWRKY25 GO:0009862 systemic acquired resistance, salicylic ... BP 0.079037374687277 RCA//AT3G47480//AtRLP33//CAD1//ATWRKY25 GO:0009737 response to abscisic acid BP 0.0796574489499465 AT1G73480//AT5G65300//Rap2.6L//AT5G06980//AtGRF2//ATCBF3//AT3G12320//ATFER2//RGA GO:0010310 regulation of hydrogen peroxide metaboli... BP 0.0808165586194183 RCA//AT3G47480//AtRLP33//CAD1 GO:0012501 programmed cell death BP 0.0826233879051532 RCA//AT5G41400//AT3G53810//AT3G47480//RPM1//AtRLP33//CAD1//ATWRKY25 GO:0010167 response to nitrate BP 0.0830205900022791 AT5G07080//AtRAV2//ATWRKY65//ATPP2-A3 GO:0010556 regulation of macromolecule biosynthetic... BP 0.0850677049120034 DEAR3//AT5G58620//ATCOL5//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATTBP2//RGA//ATWRKY25 GO:2000112 regulation of cellular macromolecule bio... BP 0.0850677049120034 DEAR3//AT5G58620//ATCOL5//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATTBP2//RGA//ATWRKY25 GO:0080134 regulation of response to stress BP 0.0854630132962953 RCA//AT5G41400//AT3G53810//AT3G47480//AtRLP33//CAD1//AT1G34420//BON3//ATWRKY25 GO:0043647 inositol phosphate metabolic process BP 0.0860793266154862 AT5G06980//AT3G12320//AT1G17340 GO:0006811 ion transport BP 0.0868741745511275 RCA//AT5G58620//AT5G43520//AtGDPD2//AT5G07080//CML41//ATFER2//AT3G22910//AtRAV2//UNE2//NRT1.7//ATWRKY65//AHA10//ATFER4//ATPP2-A3 GO:0019219 regulation of nucleobase-containing comp... BP 0.0870531488609234 DEAR3//AT5G58620//ATCOL5//Rap2.6L//ANAC066//ATBZIP24//CDF3//AT4G39780//AtGRF2//ATMYB87//ATCBF3//APRR2//ATMYB67//AtRLP33//AT1G69570//AtRAV2//AtMYB113//UMAMIT23//ATWRKY65//AT1G44830//ATTBP2//RGA//ATWRKY25 GO:0010363 regulation of plant-type hypersensitive ... BP 0.0890010378912581 RCA//AT5G41400//AT3G53810//AT3G47480//AtRLP33//CAD1//ATWRKY25 GO:0048878 chemical homeostasis BP 0.0901035571468139 ATFER2//AT3G22910//AHA10//AT-PHH1//ATFER4 GO:0097305 response to alcohol BP 0.0902862535454519 AT1G73480//AT5G65300//Rap2.6L//AT5G06980//AtGRF2//ATCBF3//AT3G12320//ATFER2//AT1G24530//RGA GO:0009753 response to jasmonic acid BP 0.0917553648962699 RCA//Rap2.6L//GATL2//AT3G47480//AtRLP33//CAD1//AtMYB113//RGA GO:0009962 regulation of flavonoid biosynthetic pro... BP 0.0921096221351659 AT5G41400//AT5G38320//AtMYB113