GOID TERM ONTOLOGY pValue Genes GO:0048598 embryonic morphogenesis BP 0.000751970189196783 DOT2//ATBS1//DOT1//BSK12 GO:0030244 cellulose biosynthetic process BP 0.00544859946114108 AT5G15880//ATGRIP//CESA6//AT5G59210//ATCSLD4//ABI8//ARF3//ALG3 GO:0071804 cellular potassium ion transport BP 0.00877747485188218 ATCIPK23//KUP5//ATCAX11 GO:0071805 potassium ion transmembrane transport BP 0.00877747485188218 ATCIPK23//KUP5//ATCAX11 GO:0051274 beta-glucan biosynthetic process BP 0.0141109188955631 AT5G15880//ATGRIP//CESA6//AT5G59210//ATCSLD4//ABI8//ARF3//ALG3 GO:0010092 specification of organ identity BP 0.0188638754066425 HEN4//AT4G02180//TPS10 GO:0010093 specification of floral organ identity BP 0.0188638754066425 HEN4//AT4G02180//TPS10 GO:0071281 cellular response to iron ion BP 0.0188638754066425 AT5G38820//ATMYB72//ACC4 GO:0030243 cellulose metabolic process BP 0.0207062021929146 AT5G15880//ATGRIP//CESA6//AT5G59210//ATCSLD4//ABI8//AT3G08600//ARF3//ALG3 GO:0071248 cellular response to metal ion BP 0.0293312714527043 AT5G38820//ATMYB72//ACC4 GO:0046520 sphingoid biosynthetic process BP 0.0376923915964523 AT5G64500//ATSMO1-2//SBH2 GO:0051273 beta-glucan metabolic process BP 0.0386521572034052 AT5G15880//ATGRIP//CESA6//AT5G59210//ATCSLD4//ABI8//AT3G08600//ARF3//ALG3 GO:0046519 sphingoid metabolic process BP 0.0422801608345204 AT5G64500//ATSMO1-2//SBH2 GO:0071241 cellular response to inorganic substance BP 0.0471340670767274 AT5G38820//ATMYB72//ACC4 GO:0006928 movement of cell or subcellular componen... BP 0.0481437467595128 KCBP//AT3G63480//ARK1//AT3G18430//AtCPA//AT2G29040//AT2G26850 GO:0003002 regionalization BP 0.0532521834470928 DOT2//HEN4//AIL5//ATNFXL2//AT4G02180//DOT1//TPS10//GRL GO:0044092 negative regulation of molecular functio... BP 0.0536595645796324 AT2G26390//AT4G30020//DSPTP1//AT1G66220//CLF GO:0055114 oxidation-reduction process BP 0.0577069835993395 AT4G17370//AT4G16270//AT5G19890//KCBP//AT5G66060//AT5G64500//ATFLS5//AT5G55780//AT5G37620//AT5G37980//AT5G18800//HEMG2//ATRBOHA//CYP77A9//AT3G61010//CYP76C7//AT3G49960//AT3G46800//FAR4//ATMCB1//ATCAD6//AT4G31760//ATSMO1-2//AT4G02180//AT1G71180//CYP721A1//CYP98A9//AT1G12130//SBH2//ALDH10A8//AT2G21550//CYP718//CYP82F1//AT1G05350//AT2G13950//AtGulLO5//CYP709B1//AT2G02680 GO:0042446 hormone biosynthetic process BP 0.0586282248392598 CES//ATIPT5//HEMG2//CYP76C7//ATSMO1-2//GAE6//AT3G24040//ABI8//NPG1//SCPL8 GO:0010039 response to iron ion BP 0.0632408813284369 AT5G38820//ATMYB72//ACC4 GO:0008202 steroid metabolic process BP 0.0645551886478338 CES//AT5G64500//ATSMO1-2//ORP2A//AT3G24040//ABI8//SBH2//TT15//ORP1D//NPG1 GO:0030148 sphingolipid biosynthetic process BP 0.0691048313166607 AT5G64500//ATSMO1-2//SBH2 GO:0006730 one-carbon metabolic process BP 0.0708825893038318 ACA3//AT2G21550 GO:1990267 response to transition metal nanoparticl... BP 0.0708891692694165 AT5G38820//ATRBOHA//WAKL4//ATMYB72//ACC4 GO:0071732 cellular response to nitric oxide BP 0.0808810353327906 AT5G38820//ATMYB72 GO:1903825 organic acid transmembrane transport BP 0.0808810353327906 ALMT6//AtGABP GO:0010305 leaf vascular tissue pattern formation BP 0.0912819682867663 DOT2//DOT1 GO:0071731 response to nitric oxide BP 0.0912819682867663 AT5G38820//ATMYB72 GO:0009827 plant-type cell wall modification BP 0.100701552266625 ATEXP24//ATCHX24//ATGRP19//EMB1674//AT1G64320//ABI8//XET//ATRAB-H1D//LUH GO:0048193 Golgi vesicle transport BP 0.100986015755376 AT5G16880//AT5G15880//ATGRIP//AT5G59210//AT5G10960//AP-3//ABI8//ATRAB-H1D//ARF3//AT1G05350//ALG3//AT2G38410 GO:0009624 response to nematode BP 0.101238340096439 MEX1//AT5G46040//ATCAX4//ATGLR2.4 GO:0071369 cellular response to ethylene stimulus BP 0.101238340096439 EIL2//AT5G38820//ATMYB72//SHN1 GO:1902170 cellular response to reactive nitrogen s... BP 0.102046356279146 AT5G38820//ATMYB72 GO:0030001 metal ion transport BP 0.102942246907957 ATCIPK23//MEX1//ATFLS5//ATBAG1//ATCHX24//AT5G06740//ATCAX4//AT3G61010//KUP5//ATHMA3//AT3G21710//AT1G63950//NRT1.9//ATMGT1//AT2G21550//ATCAX11//AT2G42950//AtGulLO5//AtMT4a GO:0042445 hormone metabolic process BP 0.108018114486277 CES//ATIPT5//HEMG2//CYP76C7//ATSMO1-2//GAE6//AT3G24040//ABI8//NPG1//SCPL8 GO:0046467 membrane lipid biosynthetic process BP 0.108599805431759 ATCIPK23//AT5G64500//ATSMO1-2//AtOCT1//SBH2 GO:0048449 floral organ formation BP 0.108599805431759 HEN4//ATMCB1//AT4G02180//TPS10//GRL GO:0007033 vacuole organization BP 0.108986652926716 AT5G10960//AP-3//EMB258 GO:0043086 negative regulation of catalytic activit... BP 0.112328563087174 AT2G26390//AT4G30020//DSPTP1//AT1G66220 GO:0016192 vesicle-mediated transport BP 0.112896439143616 AT5G16880//AT5G15880//ATGRIP//AT5G59210//AT5G10960//AP-3//AT3G52760//ABI8//anac017//ATRAB-H1D//ARF3//AT1G05350//AT1G05020//AtSCAMP3//AT2G20790//AT2G25430//ALG3//AT2G38410 GO:0035556 intracellular signal transduction BP 0.115455808617517 ATCIPK23//EIL2//AT5G65960//AT5G55780//FKBP15-2//AtRABA5a//AT3G48760//AT3G46800//AT4G02180//DSPTP1//ATMYB72//SHN1//ARR3//ATRAB-H1D//ARF3//TXND9//AT2G02680 GO:0009846 pollen germination BP 0.116342675729857 KCBP//ATCSLD4//NPG1 GO:0009851 auxin biosynthetic process BP 0.118067426068073 HEMG2//CYP76C7//GAE6//SCPL8 GO:0006873 cellular ion homeostasis BP 0.120551411218207 MEX1//ATBAG1//ATCAX4//AT3G61010//AP-3//ATGLR2.4//CDI3 GO:0000041 transition metal ion transport BP 0.122032444109564 ATFLS5//AT5G06740//ATCAX4//AT3G61010//AT3G21710//NRT1.9//AT2G21550//AtGulLO5//AtMT4a GO:0007018 microtubule-based movement BP 0.123879060131721 KCBP//AT3G63480//ARK1 GO:0009723 response to ethylene BP 0.12827422796029 ATCIPK23//EIL2//AGR//AT5G38820//AT3G48760//ATMYB72//SHN1 GO:0009250 glucan biosynthetic process BP 0.129149307524259 MEX1//AT5G15880//ATGRIP//CESA6//AT5G59210//ATXT1//ATCSLD4//AT4G30020//AT3G18500//ABI8//ARF3//ALG3 GO:0006544 glycine metabolic process BP 0.131587228835093 AT1G75980//AT2G21550//SCPL8 GO:0048825 cotyledon development BP 0.131587228835093 DOT2//HEMG2//DOT1 GO:0019932 second-messenger-mediated signaling BP 0.139458560114138 ATCIPK23//FKBP15-2//TXND9 GO:0055082 cellular chemical homeostasis BP 0.14031198224337 MEX1//ATBAG1//ATCAX4//AT3G61010//AP-3//ATGLR2.4//CDI3 GO:0010817 regulation of hormone levels BP 0.14604540306616 CES//CESA6//AGR//ATIPT5//PIN5//HEMG2//CYP76C7//ATSMO1-2//GAE6//AT3G24040//ABI8//NPG1//SCPL8 GO:0072507 divalent inorganic cation homeostasis BP 0.147484414960075 ATCAX4//ATGLR2.4//AtCRT1a GO:0009831 plant-type cell wall modification involv... BP 0.148032204477027 ABI8//XET GO:0016572 histone phosphorylation BP 0.148032204477027 ATSRA1//ATKU80 GO:0009850 auxin metabolic process BP 0.14856168812449 HEMG2//CYP76C7//GAE6//SCPL8 GO:0030048 actin filament-based movement BP 0.154994970149958 AT3G18430//AtCPA//AT2G29040//AT2G26850 GO:0006665 sphingolipid metabolic process BP 0.155656161957595 AT5G64500//ATSMO1-2//SBH2 GO:0010150 leaf senescence BP 0.155656161957595 CPR5//ATMCB1//AtOCT1 GO:0006468 protein phosphorylation BP 0.158560477794011 CKB2//ATCIPK23//CDPK19//HSL2//ATSRA1//ASK2//AT5G06740//bZIP65//ATMPK10//AT3G59730//AT3G58640//AT3G58690//AT3G50730//AT4G20450//AT1G67000//AT1G66930//WAKL4//DSPTP1//ATKU80//AtPERK7//BSK12//ATMPK20//AT1G69990//AT1G61390//AT2G29220//AT2G27060//ATWL2//AP4.3A GO:0009742 brassinosteroid mediated signaling pathw... BP 0.160101389000887 ATBS1//BSU1 GO:0010304 PSII associated light-harvesting complex... BP 0.160101389000887 ATFTSH6//FTSH1 GO:0042547 cell wall modification involved in multi... BP 0.160101389000887 ABI8//XET GO:0043401 steroid hormone mediated signaling pathw... BP 0.160101389000887 ATBS1//BSU1 GO:0048545 response to steroid hormone BP 0.160101389000887 ATBS1//BSU1 GO:0055074 calcium ion homeostasis BP 0.160101389000887 ATGLR2.4//AtCRT1a GO:0071367 cellular response to brassinosteroid sti... BP 0.160101389000887 ATBS1//BSU1 GO:0071383 cellular response to steroid hormone sti... BP 0.160101389000887 ATBS1//BSU1 GO:0009962 regulation of flavonoid biosynthetic pro... BP 0.161530859169548 AT5G41400//AT4G38550//AtMYB113//ATDGK3 GO:0006813 potassium ion transport BP 0.163965200030556 ATCIPK23//KUP5//ATCAX11 GO:0009873 ethylene-activated signaling pathway BP 0.163965200030556 EIL2//ATMYB72//SHN1 GO:0007034 vacuolar transport BP 0.165241960536592 AT5G16880//AP-3//ATMCB1//anac017//EMB258 GO:0016049 cell growth BP 0.166780126110097 CESA6//ATBAG1//ATEXP24//ATCHX24//ATSRA1//AT5G10960//ATGRP19//ATXT1//ARK1//ATMCB1//CN//EMB1674//AT1G64320//ASK9//ABI8//AT3G08600//AtPERK7//XET//ATRAB-H1D//BSK12//GRL GO:0048878 chemical homeostasis BP 0.17130246193941 MEX1//ATBAG1//PIN5//ATCAX4//AT3G61010//AP-3//ATGLR2.4//AtCRT1a//CDI3 GO:0016129 phytosteroid biosynthetic process BP 0.176615192295609 CES//ATSMO1-2//AT3G24040//ABI8//NPG1 GO:0016132 brassinosteroid biosynthetic process BP 0.176615192295609 CES//ATSMO1-2//AT3G24040//ABI8//NPG1 GO:0050801 ion homeostasis BP 0.177806479584151 MEX1//ATBAG1//ATCAX4//AT3G61010//AP-3//ATGLR2.4//AtCRT1a//CDI3 GO:0042546 cell wall biogenesis BP 0.181788766608288 CESA6//ATCSLD4//AT4G35320//AT4G22460//AT3G21710//AT3G08600//AT1G70630//ATMPK20//ATMYB63//EMB258//ATFUT2 GO:0016128 phytosteroid metabolic process BP 0.182410689622338 CES//ATSMO1-2//AT3G24040//ABI8//NPG1 GO:0016131 brassinosteroid metabolic process BP 0.182410689622338 CES//ATSMO1-2//AT3G24040//ABI8//NPG1 GO:0009813 flavonoid biosynthetic process BP 0.189817961501513 ATFLS5//AT5G41400//AT4G38550//AtMYB113//TT15//ATDGK3 GO:0006979 response to oxidative stress BP 0.19102486339279 AT4G16270//AT5G19890//RTM2//CPR5//AT5G38820//AT5G37980//ATFTSH6//AT3G49960//AT4G31760//AtCRT1a//CDI3//ATMYB72//AT2G44240 GO:0065008 regulation of biological quality BP 0.191657852445834 CES//WCRKC2//MEX1//DOT2//CESA6//AIL5//AGR//ATBAG1//ATIPT5//ATSRA1//PIN5//HEMG2//ATGRP19//ATCAX4//AT3G61010//CYP76C7//AP-3//ATGLR2.4//ATSMO1-2//AtCRT1a//GAE6//AT3G24040//ABI8//AtCPA//CDI3//ATKU80//NPG1//GRL//TXND9//SCPL8 GO:0006643 membrane lipid metabolic process BP 0.194207810200215 ATCIPK23//AT5G64500//ATSMO1-2//AtOCT1//SBH2 GO:0006857 oligopeptide transport BP 0.195610939926043 AT5G46040//AT1G27930//NRT1.9//AT1G22540 GO:0015833 peptide transport BP 0.195610939926043 AT5G46040//AT1G27930//NRT1.9//AT1G22540 GO:0006352 DNA-templated transcription, initiation BP 0.197237802701158 AT3G51120//pBRP2 GO:0098656 anion transmembrane transport BP 0.198404413644714 ALMT6//AtGABP//AtGulLO5 GO:0000160 phosphorelay signal transduction system BP 0.202678964324877 EIL2//ATMYB72//SHN1//ARR3 GO:0006810 transport BP 0.203252481908641 ATCIPK23//AT5G19700//AT5G16880//MEX1//AT5G15880//AT5G25430//ATGRIP//AT5G64500//ATFLS5//AT5G59210//AT5G59240//AGR//AT5G55780//ATBAG1//IMPA-5//AtRABA5a//AT5G46040//PHT1;6//AT5G41400//AT5G38820//ATCHX24//PIN5//AT5G10960//AT5G06740//AT5G05310//ATCAX4//AT3G61010//AP-3//AT3G52760//ATMCB1//AT4G38550//KUP5//ATGLR2.4//ATHMA3//VATG3//AT4G24840//AT4G22460//MSL3//AT3G11060//ALMT6//AT3G21710//ABI8//CDI3//AT1G27930//AtOCT1//AT1G63950//NRT1.9//GONST3//AT1G11540//ATMGT1//AT1G22540//anac017//UCP3//ATRAB-H1D//ARF3//AT2G21550//AT1G05350//ATCAX11//BSU1//AT1G05030//AT1G05020//AT2G42950//AT2G18370//AtSCAMP3//AT2G20790//AT2G25430//AtGABP//AT2G18480//ATDGK3//EMB258//ATNAT12//ALG3//AtGulLO5//AT2G38410//AT2G19080//AtMT4a GO:0070085 glycosylation BP 0.208143125595542 AT5G11700//ALG10//AT3G58640//AT3G01620//AT3G27540//TT15//EMB258//ALG3 GO:0034614 cellular response to reactive oxygen spe... BP 0.20984550419641 AT5G38820//ATMYB72 GO:0016125 sterol metabolic process BP 0.21109395240637 AT5G64500//ATSMO1-2//AT3G24040//ABI8//SBH2//TT15 GO:0030003 cellular cation homeostasis BP 0.21109395240637 MEX1//ATBAG1//ATCAX4//AT3G61010//AP-3//ATGLR2.4 GO:0006826 iron ion transport BP 0.21238305213343 ATFLS5//ATCAX4//AT3G61010//AT3G21710//NRT1.9 GO:0034220 ion transmembrane transport BP 0.212788672352452 ATCIPK23//ATCHX24//KUP5//ALMT6//ATCAX11//AtGABP//AtGulLO5 GO:0019725 cellular homeostasis BP 0.21552767757411 WCRKC2//MEX1//ATBAG1//ATCAX4//AT3G61010//AP-3//ATGLR2.4//CDI3//TXND9 GO:0006891 intra-Golgi vesicle-mediated transport BP 0.216229551632366 AT5G16880//ATRAB-H1D//AT2G38410 GO:0009683 indoleacetic acid metabolic process BP 0.216229551632366 CYP76C7//GAE6//SCPL8