GOID TERM ONTOLOGY pValue Genes GO:0016109 tetraterpenoid biosynthetic process BP 0.000112882102209737 AtHBP5//ACD2//OVA2//AT5G07020//ATCYP38//AT1G65230//AtTLP18.3 GO:0016117 carotenoid biosynthetic process BP 0.000112882102209737 AtHBP5//ACD2//OVA2//AT5G07020//ATCYP38//AT1G65230//AtTLP18.3 GO:0016108 tetraterpenoid metabolic process BP 0.000127904916657694 AtHBP5//ACD2//OVA2//AT5G07020//ATCYP38//AT1G65230//AtTLP18.3 GO:0016116 carotenoid metabolic process BP 0.000127904916657694 AtHBP5//ACD2//OVA2//AT5G07020//ATCYP38//AT1G65230//AtTLP18.3 GO:1901564 organonitrogen compound metabolic proces... BP 0.000432436852099009 RD21//ACD2//ACBP//SHM2//AT5G65760//ACS5//OVA2//BUD2//PAS2//AT5G01090//ATSSL4//OEC33//PGL2//AT3G48200//AQI//APT4//AT4G10060//LHCA2*1//ATCYSD1//ATCYP38//AT1G65230//AtTLP18.3 GO:0044272 sulfur compound biosynthetic process BP 0.000600031855486404 ACBP//AT5G65760//PAS2//AT5G01090//OEC33//AQI//LHCA2*1//UMAMIT47//ATCYSD1//ABCD2//AT1G65230//AtTLP18.3 GO:0009902 chloroplast relocation BP 0.000617131117373222 AT5G07020//ATSSL4//OEC33//AT3G48200//ATCYP38//AT1G65230 GO:0019750 chloroplast localization BP 0.000617131117373222 AT5G07020//ATSSL4//OEC33//AT3G48200//ATCYP38//AT1G65230 GO:0051644 plastid localization BP 0.000617131117373222 AT5G07020//ATSSL4//OEC33//AT3G48200//ATCYP38//AT1G65230 GO:0051667 establishment of plastid localization BP 0.000617131117373222 AT5G07020//ATSSL4//OEC33//AT3G48200//ATCYP38//AT1G65230 GO:0051656 establishment of organelle localization BP 0.00065246454673224 AT5G07020//ATSSL4//OEC33//AT3G48200//ATCYP38//AT1G65230 GO:0051640 organelle localization BP 0.00127025344224326 AT5G07020//ATSSL4//OEC33//AT3G48200//ATCYP38//AT1G65230 GO:0016144 S-glycoside biosynthetic process BP 0.00216818879183643 OEC33//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0019758 glycosinolate biosynthetic process BP 0.00216818879183643 OEC33//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0019761 glucosinolate biosynthetic process BP 0.00216818879183643 OEC33//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0090558 plant epidermis development BP 0.0022437617496639 ACL5//PAS2//AT5G01090//AT3G61700//AT3G48200//ATROPGEF1//AT4G11100//AT4G10060//ATCYP38//ATHB-15//ZFP8 GO:0006098 pentose-phosphate shunt BP 0.00253097586924298 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0051156 glucose 6-phosphate metabolic process BP 0.00253097586924298 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0010016 shoot system morphogenesis BP 0.00256681059398602 AT5G07020//AT3G61700//ATSSL4//OEC33//AT3G48200//AT4G11100//AT4G10060//ATCYP38//ATHB-15//ZFP8 GO:0006739 NADP metabolic process BP 0.00279531819681481 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0046496 nicotinamide nucleotide metabolic proces... BP 0.00298300777589431 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0046148 pigment biosynthetic process BP 0.00302668041899441 AtHBP5//ACD2//OVA2//AT5G07020//APT4//ATCYP38//AT1G65230//AtTLP18.3 GO:0019362 pyridine nucleotide metabolic process BP 0.00318022708105005 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0006790 sulfur compound metabolic process BP 0.00324127375256824 ACBP//AT5G65760//PAS2//AT5G01090//OEC33//AQI//LHCA2*1//UMAMIT47//ATCYSD1//ABCD2//AT1G65230//AtTLP18.3 GO:0042440 pigment metabolic process BP 0.0033025149272522 RD21//AtHBP5//ACD2//OVA2//AT5G07020//APT4//ATCYP38//AT1G65230//AtTLP18.3 GO:0072524 pyridine-containing compound metabolic p... BP 0.00371702809207187 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0044550 secondary metabolite biosynthetic proces... BP 0.0039500842723656 OEC33//AT4G00040//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0016143 S-glycoside metabolic process BP 0.00417210836917891 OEC33//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0019757 glycosinolate metabolic process BP 0.00417210836917891 OEC33//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0019760 glucosinolate metabolic process BP 0.00417210836917891 OEC33//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0034660 ncRNA metabolic process BP 0.00439523591231097 ACD2//OVA2//AT5G07020//OEC33//LHCA2*1//ATCYP38//AT1G65230//AtTLP18.3 GO:0070838 divalent metal ion transport BP 0.00496212250979999 ACBP//AT5G27290//AALP//OEC33//LHCA2*1//COR314-TM2 GO:0016114 terpenoid biosynthetic process BP 0.00499516968535847 AtHBP5//ACD2//OVA2//AT5G07020//ATCYP38//AT1G65230//AtTLP18.3 GO:0015766 disaccharide transport BP 0.00514122804120699 ATSUC9//ATSUC7 GO:0015772 oligosaccharide transport BP 0.00514122804120699 ATSUC9//ATSUC7 GO:0072511 divalent inorganic cation transport BP 0.00530711253824752 ACBP//AT5G27290//AALP//OEC33//LHCA2*1//COR314-TM2 GO:0006721 terpenoid metabolic process BP 0.0065801828694571 AtHBP5//ACD2//OVA2//AT5G07020//ATCYP38//AT1G65230//AtTLP18.3 GO:0006733 oxidoreduction coenzyme metabolic proces... BP 0.00750079173730884 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0009069 serine family amino acid metabolic proce... BP 0.00830355824299663 ACBP//SHM2//PAS2//AT5G01090//AQI//ATCYSD1//AtTLP18.3 GO:0008361 regulation of cell size BP 0.00836001266993096 ACL5//AT5G01090//ATROPGEF1 GO:0043473 pigmentation BP 0.00855083364038207 ACL5//PAS2//AT5G01090//ATROPGEF1 GO:0043476 pigment accumulation BP 0.00855083364038207 ACL5//PAS2//AT5G01090//ATROPGEF1 GO:0043478 pigment accumulation in response to UV l... BP 0.00855083364038207 ACL5//PAS2//AT5G01090//ATROPGEF1 GO:0043479 pigment accumulation in tissues in respo... BP 0.00855083364038207 ACL5//PAS2//AT5G01090//ATROPGEF1 GO:0043480 pigment accumulation in tissues BP 0.00855083364038207 ACL5//PAS2//AT5G01090//ATROPGEF1 GO:0043481 anthocyanin accumulation in tissues in r... BP 0.00855083364038207 ACL5//PAS2//AT5G01090//ATROPGEF1 GO:0055086 nucleobase-containing small molecule met... BP 0.00859118640441192 GME//ACD2//OEC33//PGL2//AT3G48200//APT4//LHCA2*1//ATCYP38//AT1G65230 GO:0009825 multidimensional cell growth BP 0.00896423320822195 ACL5//PAS2//AT5G01090//ATROPGEF1 GO:1901659 glycosyl compound biosynthetic process BP 0.00898833136611035 OEC33//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0010103 stomatal complex morphogenesis BP 0.00911461530706762 AT3G61700//AT3G48200//AT4G11100//AT4G10060//ATCYP38 GO:0006563 L-serine metabolic process BP 0.0101018284407438 SHM2//ATCYSD1 GO:0009657 plastid organization BP 0.0111971193559066 OVA2//AT5G07020//ATSSL4//OEC33//AT3G48200//ATCYP38//AT1G65230//AtTLP18.3//ZFP8 GO:0010218 response to far red light BP 0.0112270806937832 ACL5//IAA29//LHCA2*1//AtTLP18.3 GO:0019344 cysteine biosynthetic process BP 0.0115464394411359 ACBP//PAS2//AT5G01090//AQI//ATCYSD1//AtTLP18.3 GO:1901657 glycosyl compound metabolic process BP 0.011886411324926 OEC33//APT4//LHCA2*1//UMAMIT47//ABCD2//AT1G65230//AtTLP18.3 GO:0006534 cysteine metabolic process BP 0.012178307532089 ACBP//PAS2//AT5G01090//AQI//ATCYSD1//AtTLP18.3 GO:0007020 microtubule nucleation BP 0.0125146130412563 GPP2//AT5G50180//MGP2 GO:0009070 serine family amino acid biosynthetic pr... BP 0.0128342268378664 ACBP//PAS2//AT5G01090//AQI//ATCYSD1//AtTLP18.3 GO:0042548 regulation of photosynthesis, light reac... BP 0.0131313068934073 OEC33//ATCYP38 GO:1901566 organonitrogen compound biosynthetic pro... BP 0.0132794817827857 ACD2//ACBP//AT5G65760//ACS5//BUD2//PAS2//AT5G01090//ATSSL4//AQI//APT4//ATCYSD1//ATCYP38//AtTLP18.3 GO:0006470 protein dephosphorylation BP 0.0144226493915177 AT5G02760//OEC33//ATCYP38//AtTLP18.3//ZFP8 GO:0000097 sulfur amino acid biosynthetic process BP 0.0145116289974855 ACBP//AT5G65760//PAS2//AT5G01090//AQI//ATCYSD1//AtTLP18.3 GO:0044281 small molecule metabolic process BP 0.0147506349802856 RD21//GME//ACD2//ACBP//SHM2//AT5G65760//ACS5//AALP//OVA2//ATF2//PAS2//AT5G01090//OEC33//PGL2//AT3G48200//AQI//PFK1//APT4//LHCA2*1//UMAMIT47//ATCYSD1//ATCYP38//AAE14//ABCD2//AT1G65230//AtTLP18.3 GO:0046785 microtubule polymerization BP 0.0149624551314112 GPP2//AT5G50180//MGP2 GO:0019220 regulation of phosphate metabolic proces... BP 0.0153202341990005 PAS2//OEC33//ATCYP38//AtTLP18.3//ZFP8 GO:0051174 regulation of phosphorus metabolic proce... BP 0.0153202341990005 PAS2//OEC33//ATCYP38//AtTLP18.3//ZFP8 GO:0009117 nucleotide metabolic process BP 0.0156205014272102 GME//ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:1901607 alpha-amino acid biosynthetic process BP 0.01591430716142 ACBP//AT5G65760//ACS5//PAS2//AT5G01090//AQI//ATCYSD1//AtTLP18.3 GO:0009668 plastid membrane organization BP 0.0160953880567849 OVA2//AT5G07020//OEC33//ATCYP38//AT1G65230//ZFP8 GO:0010027 thylakoid membrane organization BP 0.0160953880567849 OVA2//AT5G07020//OEC33//ATCYP38//AT1G65230//ZFP8 GO:0006753 nucleoside phosphate metabolic process BP 0.0162121158879666 GME//ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0051186 cofactor metabolic process BP 0.0163735604474261 RD21//ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AAE14//AT1G65230//AtTLP18.3 GO:0008643 carbohydrate transport BP 0.0165042942724367 ATSUC9//ATSUC7 GO:0043467 regulation of generation of precursor me... BP 0.0165042942724367 OEC33//ATCYP38 GO:0009773 photosynthetic electron transport in pho... BP 0.0167341553536071 OEC33//ATCYP38//AtTLP18.3 GO:0031109 microtubule polymerization or depolymeri... BP 0.0167341553536071 GPP2//AT5G50180//MGP2 GO:0031399 regulation of protein modification proce... BP 0.0167356831929289 PAS2//OEC33//ATCYP38//AtTLP18.3//ZFP8 GO:0019693 ribose phosphate metabolic process BP 0.0168232784344251 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230 GO:0009658 chloroplast organization BP 0.0172995071592432 AT5G07020//ATSSL4//OEC33//AT3G48200//ATCYP38//AT1G65230 GO:0035304 regulation of protein dephosphorylation BP 0.0174222304175709 OEC33//ATCYP38//AtTLP18.3//ZFP8 GO:0006732 coenzyme metabolic process BP 0.0184112999822816 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AAE14//AT1G65230 GO:0035303 regulation of dephosphorylation BP 0.0187376889037348 OEC33//ATCYP38//AtTLP18.3//ZFP8 GO:0090626 plant epidermis morphogenesis BP 0.01899990063501 AT3G61700//AT3G48200//AT4G11100//AT4G10060//ATCYP38//ATHB-15 GO:0009642 response to light intensity BP 0.019283791016923 ACBP//OEC33//LHCA2*1//AT1G14200//AT2G30480 GO:0016311 dephosphorylation BP 0.019283791016923 AT5G02760//OEC33//ATCYP38//AtTLP18.3//ZFP8 GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 0.0197604789176993 ACD2//OEC33//PGL2//AT3G48200//LHCA2*1//ATCYP38//AT1G65230//AtTLP18.3 GO:1901135 carbohydrate derivative metabolic proces... BP 0.0217035001378886 GME//ACD2//OEC33//PGL2//AT3G48200//APT4//AT4G10060//LHCA2*1//UMAMIT47//ATCYP38//ABCD2//AT1G65230//AtTLP18.3 GO:0051234 establishment of localization BP 0.0217606054920033 RD21//ACL5//ACBP//AT5G27290//AALP//ATSTP11//AT5G07020//ATSUC9//AT5G01090//SIP2//ATSSL4//OEC33//AT3G48200//ATROPGEF1//LHCA2*1//ATSUC7//YSL6//LTP6//ATEXO70H3//ATCYP38//COR314-TM2//ABCD2//AT1G65230//ZFP8 GO:0006996 organelle organization BP 0.0219768957889798 RD21//ACBP//AALP//GPP2//AT5G50180//OVA2//AT5G07020//ATSSL4//OEC33//AT3G48200//ZYP1//ATCYP38//AT1G65230//AtTLP18.3//MGP2//ATHB-15//AT1G62450//AT2G38160//ZFP8 GO:0009965 leaf morphogenesis BP 0.0220755275685093 AT5G07020//ATSSL4//OEC33//ATHB-15//ZFP8 GO:0009888 tissue development BP 0.0222110978095503 ACL5//PAS2//AT5G01090//AT3G61700//AT3G48200//ATROPGEF1//AT4G23740//AT4G11100//AT4G10060//ATCYP38//ATDUF2//ATHB-15//ZFP8 GO:0000096 sulfur amino acid metabolic process BP 0.0239479955455871 ACBP//AT5G65760//PAS2//AT5G01090//AQI//ATCYSD1//AtTLP18.3 GO:0009653 anatomical structure morphogenesis BP 0.0242893807549318 ACL5//PAS2//AT5G07020//AT5G01090//AT3G61700//ATSSL4//OEC33//AT3G48200//ATROPGEF1//AT4G11100//AT4G10060//ATCYP38//ATDUF2//MGP2//ATHB-15//AT2G38160//ZFP8 GO:0048767 root hair elongation BP 0.0246080878927862 ACL5//PAS2//AT5G01090//ATROPGEF1 GO:0010374 stomatal complex development BP 0.0251186348565524 AT3G61700//AT3G48200//AT4G11100//AT4G10060//ATCYP38 GO:0016556 mRNA modification BP 0.0254116044939153 AT5G64380//AT3G48200//AT4G11100//UMAMIT13 GO:0032535 regulation of cellular component size BP 0.0254116044939153 ACL5//AT5G01090//ATROPGEF1//ATHB-15 GO:0090066 regulation of anatomical structure size BP 0.0254116044939153 ACL5//AT5G01090//ATROPGEF1//ATHB-15 GO:0030003 cellular cation homeostasis BP 0.0262308311906203 AT5G27290//OEC33//LHCA2*1//COR314-TM2 GO:0042743 hydrogen peroxide metabolic process BP 0.0264078355891343 RD21//AALP//OEC33//ATCYP38//ZFP8