GOID	TERM	ONTOLOGY	pValue	Genes
GO:0048518	positive regulation of biological proces...	BP	1.30552954900304e-05	ATRAD51C//FAR1//ELIP2//ARF7//CYP97A3//ATRAD18//ATGLK2//HCF136//EMB40//CRN//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//AT4G04340//ATPTPKIS1//ATMSH1//MOS4//LSF1//AtCRT3//AGO1//AGL44//AT2G16365//BASS2
GO:0009893	positive regulation of metabolic process	BP	0.00012741811912165	ATRAD51C//FAR1//ARF7//CYP97A3//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//AT4G04340//ATPTPKIS1//ATMSH1//LSF1//AT2G16365//BASS2
GO:0009954	proximal/distal pattern formation	BP	0.000549977082088354	ATBT4//AGO1//AS1
GO:0015995	chlorophyll biosynthetic process	BP	0.000581811273769817	ELIP2//CYP97A3//AT3G56680//ATGLK2//HCF136//ATCCD1//ATHS1
GO:0006305	DNA alkylation	BP	0.000807421302671933	ATRAD51C//ATRAD18//AtCYP71//ATMSH1//AT3G02890//FDM5//AGO1//ATOGG1
GO:0006306	DNA methylation	BP	0.000807421302671933	ATRAD51C//ATRAD18//AtCYP71//ATMSH1//AT3G02890//FDM5//AGO1//ATOGG1
GO:0006304	DNA modification	BP	0.000845928711980846	ATRAD51C//ATRAD18//AtCYP71//ATMSH1//AT3G02890//FDM5//AGO1//ATOGG1
GO:0044728	DNA methylation or demethylation	BP	0.000845928711980846	ATRAD51C//ATRAD18//AtCYP71//ATMSH1//AT3G02890//FDM5//AGO1//ATOGG1
GO:0010628	positive regulation of gene expression	BP	0.000951474862460689	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//ATMSH1//AT2G16365
GO:0010557	positive regulation of macromolecule bio...	BP	0.00108841356176894	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//ATMSH1//AT2G16365
GO:0031328	positive regulation of cellular biosynth...	BP	0.00114762872559167	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//ATMSH1//AT2G16365
GO:0048522	positive regulation of cellular process	BP	0.00118166205542558	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//EMB40//CRN//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//ATMSH1//AGO1//AGL44//AT2G16365
GO:0007623	circadian rhythm	BP	0.00118561523959797	FAR1//SRR1//ATNFXL2//ATCBF3//ATFSD1//AT4G02630//ATPTPKIS1
GO:0048511	rhythmic process	BP	0.00118561523959797	FAR1//SRR1//ATNFXL2//ATCBF3//ATFSD1//AT4G02630//ATPTPKIS1
GO:0071478	cellular response to radiation	BP	0.00130866023217593	FAR1//ELIP2//ARF7//SRR1//PAC
GO:0071482	cellular response to light stimulus	BP	0.00130866023217593	FAR1//ELIP2//ARF7//SRR1//PAC
GO:0010604	positive regulation of macromolecule met...	BP	0.00141215840526547	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//ATMSH1//AT2G16365
GO:0006779	porphyrin-containing compound biosynthet...	BP	0.00144664227661914	ELIP2//CYP97A3//AT3G56680//ATGLK2//HCF136//ATCCD1//ATHS1
GO:0031325	positive regulation of cellular metaboli...	BP	0.00144853576909962	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//ATMSH1//AT2G16365
GO:0051188	cofactor biosynthetic process	BP	0.00151664647667862	ELIP2//CYP97A3//AT3G56680//ATGLK2//CLPS5//HCF136//APG1//ATCCD1//ATHS1
GO:0033014	tetrapyrrole biosynthetic process	BP	0.00151842141819448	ELIP2//CYP97A3//AT3G56680//ATGLK2//HCF136//ATCCD1//ATHS1
GO:0006302	double-strand break repair	BP	0.00189749128618391	ATRAD51C//FAR1//ATRAD18//ATMSH1//ATLIG1
GO:0016444	somatic cell DNA recombination	BP	0.00191711507645563	ATRAD51C//ATRAD18//ATMSH1
GO:0045893	positive regulation of transcription, DN...	BP	0.00194207919547407	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//ATMSH1//AT2G16365
GO:0051254	positive regulation of RNA metabolic pro...	BP	0.00194207919547407	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//ATMSH1//AT2G16365
GO:1902680	positive regulation of RNA biosynthetic ...	BP	0.00194207919547407	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//ATMSH1//AT2G16365
GO:1903508	positive regulation of nucleic acid-temp...	BP	0.00194207919547407	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//ATMSH1//AT2G16365
GO:0000724	double-strand break repair via homologou...	BP	0.00212616684758173	ATRAD51C//FAR1//ATRAD18//ATMSH1
GO:0000725	recombinational repair	BP	0.00212616684758173	ATRAD51C//FAR1//ATRAD18//ATMSH1
GO:0045935	positive regulation of nucleobase-contai...	BP	0.00220828802892846	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//ATMSH1//AT2G16365
GO:0051173	positive regulation of nitrogen compound...	BP	0.0023228198934469	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//ATMSH1//AT2G16365
GO:0015994	chlorophyll metabolic process	BP	0.00296644743094143	ELIP2//CYP97A3//AT3G56680//ATGLK2//HCF136//ATCCD1//ATHS1
GO:0010090	trichome morphogenesis	BP	0.00300025340325384	DCR//EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0007155	cell adhesion	BP	0.00321247112934253	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0022610	biological adhesion	BP	0.00321247112934253	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0009891	positive regulation of biosynthetic proc...	BP	0.00331052442232975	ATRAD51C//FAR1//ARF7//ATRAD18//ATGLK2//HCF136//ATNFXL2//U1-70K//AtCYP71//ATHB-16//AME3//ATMSH1//AT2G16365
GO:0010218	response to far red light	BP	0.00384299749047304	FAR1//ELIP2//HCF136//PSBQ//AGO1
GO:0030838	positive regulation of actin filament po...	BP	0.00407157105575346	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0045010	actin nucleation	BP	0.00407157105575346	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0019222	regulation of metabolic process	BP	0.0041237637261448	ATRAD51C//FAR1//ELIP2//ARF7//CYP97A3//ATBT4//ATRAD18//AT5G59130//ATGLK2//HCF136//ATMYB64//ATNFXL2//U1-70K//AtbZIP5//AtCYP71//ATHB-16//BLH6//AME3//ATCBF3//PSBQ//AT4G04340//AtIDD12//ATPTPKIS1//AT3G19184//ATMSH1//AT3G02890//LSF1//PP2AA3//ATAUX2-27//ATLIG1//FDM5//AGO1//ATOGG1//AGL44//AT2G16365//NF-YB7//BASS2//AS1//AT2G33720
GO:0031334	positive regulation of protein complex a...	BP	0.00430970501603858	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0032273	positive regulation of protein polymeriz...	BP	0.00430970501603858	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0043687	post-translational protein modification	BP	0.00430970501603858	ATRAD51C//ATRAD18//U1-70K//AtCYP71//ATMSH1
GO:0010026	trichome differentiation	BP	0.00437389585715359	DCR//EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0044089	positive regulation of cellular componen...	BP	0.00455761516605735	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0051495	positive regulation of cytoskeleton orga...	BP	0.00455761516605735	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0008064	regulation of actin polymerization or de...	BP	0.00536214728073879	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0030832	regulation of actin filament length	BP	0.00536214728073879	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0030833	regulation of actin filament polymerizat...	BP	0.00536214728073879	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0032956	regulation of actin cytoskeleton organiz...	BP	0.00536214728073879	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0032970	regulation of actin filament-based proce...	BP	0.00536214728073879	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0042440	pigment metabolic process	BP	0.00540165720812393	ELIP2//CYP97A3//AT3G56680//ATGLK2//HCF136//ATCCD1//ATHS1//AtCRT3//PAC
GO:0000023	maltose metabolic process	BP	0.00543998228630035	CYP97A3//AT4G04340//ATPTPKIS1//AT3G18500//LSF1//BASS2
GO:0050789	regulation of biological process	BP	0.00548157904677507	ATRAD51C//FAR1//ELIP2//ARF7//CBSX1//CYP97A3//ATBT4//BAM1//ATRAD18//SRR1//AT5G59130//ATET2//AtRABA5a//ATGLK2//AtGDU7//ARLA1A//HCF136//EMB40//CRN//ATMYB64//ATNFXL2//AT3G58760//U1-70K//AtbZIP5//AtRLP44//AtCYP71//ATHB-16//BLH6//AME3//AT2301//ATCBF3//PSBQ//AT4G04340//AtIDD12//ATDET1//ATPTPKIS1//AT3G19184//ATMSH1//MOS4//AT3G02890//LSF1//PP2AA3//AtRLP13//AtCRT3//ATAUX2-27//ATLIG1//FDM5//AGO1//ATOGG1//AGL44//AT2G16365//NF-YB7//DEG2//BASS2//AS1//AT2G33720
GO:0048366	leaf development	BP	0.00554013801295816	ARF7//ATGLK2//CRN//AtCYP71//AT2301//AGO1//PAC//UBP15//ATFER4//AS1
GO:0046148	pigment biosynthetic process	BP	0.00561475624345688	ELIP2//CYP97A3//AT3G56680//ATGLK2//HCF136//ATCCD1//ATHS1//PAC
GO:0006778	porphyrin-containing compound metabolic ...	BP	0.00588913625212056	ELIP2//CYP97A3//AT3G56680//ATGLK2//HCF136//ATCCD1//ATHS1
GO:0033013	tetrapyrrole metabolic process	BP	0.00588913625212056	ELIP2//CYP97A3//AT3G56680//ATGLK2//HCF136//ATCCD1//ATHS1
GO:0030041	actin filament polymerization	BP	0.005951295607882	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0032271	regulation of protein polymerization	BP	0.005951295607882	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0043254	regulation of protein complex assembly	BP	0.005951295607882	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0006655	phosphatidylglycerol biosynthetic proces...	BP	0.00650171840167377	CYP97A3//APG1//ATCCD1//GDC1
GO:0009314	response to radiation	BP	0.00653188288498721	ATRAD51C//FAR1//ELIP2//ARF7//BAM1//ATRAD18//SRR1//HCF136//AtCYP71//ATHB-16//FRS9//AT2301//ATFSD1//PSBQ//ATDET1//ATMSH1//ATHDA15//AGO1//PAC//AT2G27140
GO:0009628	response to abiotic stimulus	BP	0.00664150525713099	ATRAD51C//FAR1//ELIP2//ARF7//ATBT4//BAM1//ATRAD18//SRR1//ATGLK2//HCF136//ABCG22//ATNFXL2//ATCCD1//AtCYP71//ATHB-16//FRS9//AT2301//ATCBF3//ATFSD1//PSBQ//ATDET1//GDC1//ATMSH1//ATHDA15//ATHS1//RCI2A//FDM5//AT1G52420//AGO1//PAC//AT2G16365//AT2G27140//AS1
GO:0008154	actin polymerization or depolymerization	BP	0.00691840035384068	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0043085	positive regulation of catalytic activit...	BP	0.00691840035384068	CYP97A3//AT4G04340//ATPTPKIS1//LSF1//BASS2
GO:0051493	regulation of cytoskeleton organization	BP	0.00691840035384068	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0046471	phosphatidylglycerol metabolic process	BP	0.00694626281190197	CYP97A3//APG1//ATCCD1//GDC1
GO:0044093	positive regulation of molecular functio...	BP	0.00726382842463752	CYP97A3//AT4G04340//ATPTPKIS1//LSF1//BASS2
GO:0051258	protein polymerization	BP	0.00747265197648495	BAM1//LPA66//EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0071214	cellular response to abiotic stimulus	BP	0.00762112487489525	FAR1//ELIP2//ARF7//SRR1//PAC
GO:0008299	isoprenoid biosynthetic process	BP	0.00763038728264936	CYP97A3//HCF136//APG1//ATCCD1//AT2301//PRPL28//GDC1//ATHS1//PAC//AT1G14940//DEG2
GO:0010082	regulation of root meristem growth	BP	0.00824229451569079	CRN//AtCYP71
GO:0016122	xanthophyll metabolic process	BP	0.00824229451569079	CYP97A3//ATCCD1
GO:0090056	regulation of chlorophyll metabolic proc...	BP	0.00824229451569079	ELIP2//ATGLK2
GO:1901463	regulation of tetrapyrrole biosynthetic ...	BP	0.00824229451569079	ELIP2//ATGLK2
GO:0044087	regulation of cellular component biogene...	BP	0.00837212174089751	EMB40//CRN//AtCYP71//AGO1//AGL44
GO:0010212	response to ionizing radiation	BP	0.00839921044380409	ATRAD51C//FAR1//ATRAD18//AtCYP71
GO:0006996	organelle organization	BP	0.00868310988555241	ATRAD51C//FAR1//AT5G20890//EMB2247//BAM1//ATRAD18//LPA66//ATGLK2//ARLA1A//HCF136//EMB40//CRN//AT5G11470//EMB2789//MEE40//AtCYP71//PSBQ//GDC1//ATMSH1//ATHDA15//ATHS1//AT3G02890//RCI2A//AtNUP1//ATLIG1//AGO1//PAC//AGL44//AT2G16365//ATFER4//DEG2
GO:0010467	gene expression	BP	0.00911527365291101	RPS4//ATRAD51C//FAR1//AT5G09490//ARF7//EMB2247//ATBT4//ATRAD18//AT//ATGLK2//HCF136//CRN//ATMYB64//ATNFXL2//U1-70K//AtbZIP5//AtCYP71//ATHB-16//BLH6//AME3//AT4G27130//ATCBF3//AtIDD12//PRPL28//AT3G19184//ATMSH1//AT3G16680//AT3G02890//AtNUP1//AT1G72550//ATAUX2-27//ATLIG1//FDM5//AGO1//PAC//ATOGG1//AGL44//AT2G16365//NF-YB7//ARP1//AT2G16800//AT2G29210//AS1//AT2G33720
GO:0010050	vegetative phase change	BP	0.00947066421972486	AT3G02890//FDM5//AGO1//AT2G16800
GO:0065007	biological regulation	BP	0.0098120151248743	ATRAD51C//FAR1//ELIP2//AtG3Pp4//ARF7//CBSX1//CYP97A3//ATBT4//BAM1//ATRAD18//SRR1//AT5G59130//ATET2//AtRABA5a//ATGLK2//AtGDU7//ARLA1A//HCF136//EMB40//CRN//ATMYB64//ATNFXL2//AT3G58760//U1-70K//AtbZIP5//AtRLP44//AtCYP71//ATHB-16//BLH6//AME3//AT2301//ATCBF3//PSBQ//AT4G04340//AtIDD12//ATDET1//ATPTPKIS1//AT3G19184//ATMSH1//MOS4//AT3G02890//LSF1//PP2AA3//AtRLP13//AtCRT3//ATAUX2-27//ATLIG1//FDM5//AGO1//ATOGG1//AGL44//AT2G16365//NF-YB7//ATFER4//AT2G16800//DEG2//BASS2//AS1//AT2G33720
GO:0051193	regulation of cofactor metabolic process	BP	0.00998129704722677	ELIP2//ATGLK2
GO:0006720	isoprenoid metabolic process	BP	0.010004783107443	CYP97A3//HCF136//APG1//ATCCD1//AT2301//PRPL28//GDC1//ATHS1//PAC//AT1G14940//DEG2
GO:0009637	response to blue light	BP	0.0104710637570666	ELIP2//ARF7//HCF136//ATHB-16//PSBQ
GO:0051168	nuclear export	BP	0.0106273738105725	CRN//EMB2789//AtCYP71//AtNUP1
GO:0010035	response to inorganic substance	BP	0.0107797114064582	ATBT4//AtZIP2//HCF136//ABCG22//ATCCD1//ATCBF3//ATFSD1//AT4G00910//ATHS1//RCI2A//AGL44//ATFER4//ALS3//AT2G27140//AS1
GO:0019682	glyceraldehyde-3-phosphate metabolic pro...	BP	0.0107959778404589	CYP97A3//HCF136//APG1//ATCCD1//ANTR2//PRPL28//GDC1//ATHS1//DEG2
GO:0006974	cellular response to DNA damage stimulus	BP	0.0108230913984309	ATRAD51C//FAR1//ATRAD18//AtCYP71//ATDET1//ATMSH1//ATLIG1//ATOGG1
GO:0005983	starch catabolic process	BP	0.0118675610402545	ATPTPKIS1//LSF1
GO:0009251	glucan catabolic process	BP	0.0118675610402545	ATPTPKIS1//LSF1
GO:0010449	root meristem growth	BP	0.0118675610402545	CRN//AtCYP71
GO:0044247	cellular polysaccharide catabolic proces...	BP	0.0118675610402545	ATPTPKIS1//LSF1
GO:1901401	regulation of tetrapyrrole metabolic pro...	BP	0.0118675610402545	ELIP2//ATGLK2
GO:0005982	starch metabolic process	BP	0.0118995309387206	CYP97A3//ATCBF3//AT4G04340//ATPTPKIS1//AT3G18500//LSF1//BASS2
GO:0009058	biosynthetic process	BP	0.0134650119062546	RPS4//ATRAD51C//FAR1//ELIP2//AT5G09490//ARF7//AT5G20890//CYP97A3//AT3G56680//EMB2247//ATBT4//BAM1//ATRAD18//AT5G61290//ATGLK2//CLPS5//ARLA1A//DCR//HCF136//ATMYB64//ATNFXL2//AT5G02280//APG1//ATCCD1//MEE40//U1-70K//AtbZIP5//AtCYP71//ATHB-16//KCS17//BLH6//AME3//AT4G27130//AT2301//ATCBF3//AT4G04340//AtIDD12//PRPL28//GDC1//ATPTPKIS1//AT3G19100//AT3G19184//ATMSH1//AT3G18500//ATHS1//AT3G16680//AT3G02890//LSF1//PP2AA3//AT1G72550//AT1G73170//AT1G75400//AtCRT3//ATAUX2-27//ATLIG1//FDM5//AT1G52420//AGO1//PAC//PSAF//AT1G14940//AGL44//AT2G16365//NF-YB7//ATFER4//ARP1//AT2G16800//DEG2//BASS2//AS1//AT2G33720
GO:0009657	plastid organization	BP	0.013676718625006	EMB2247//ATGLK2//HCF136//MEE40//PSBQ//GDC1//PAC//AT2G16365//ATFER4//DEG2
GO:0002218	activation of innate immune response	BP	0.0138966452282011	MOS4//AtCRT3
GO:0002253	activation of immune response	BP	0.0138966452282011	MOS4//AtCRT3
GO:0071489	cellular response to red or far red ligh...	BP	0.0139448800865092	FAR1//ELIP2//SRR1