GOID TERM ONTOLOGY pValue Genes GO:0010817 regulation of hormone levels BP 0.000872262975844885 ROT3//CPI1//PYL1//PR5K//AT3G57010//SGR7//AT4G32860//BAT1//AT4G29270//ABCB2//BAM3//LSH9//ATMT3//GAMMA-TIP2//JAL34//AT1G80360//ATCKX5//ARAC4//CYP79B3//CYP711A1 GO:0019375 galactolipid biosynthetic process BP 0.00114380361243216 SQD2//ATPAP22//ATSPS4F//AT3G03790//AtOCT1//AT1G67600//RD2 GO:0019374 galactolipid metabolic process BP 0.00129243372058067 SQD2//ATPAP22//ATSPS4F//AT3G03790//AtOCT1//AT1G67600//RD2 GO:0016108 tetraterpenoid metabolic process BP 0.00293619845010614 SQD2//ATK2//ABA4//CAS1//CYP711A1 GO:0016116 carotenoid metabolic process BP 0.00293619845010614 SQD2//ATK2//ABA4//CAS1//CYP711A1 GO:0016036 cellular response to phosphate starvatio... BP 0.00296276842394693 SQD2//ATPAP22//CAT2//ATAIG1//AT3G03790//AtOCT1//AT1G67600//RD2 GO:0009247 glycolipid biosynthetic process BP 0.00309520601102075 SQD2//ATPAP22//ATSPS4F//AT3G03790//AtOCT1//AT1G67600//RD2 GO:0046467 membrane lipid biosynthetic process BP 0.00350980882085359 SQD2//ATTSC13//ATPAP22//ATSPS4F//AT3G03790//AtOCT1//AT1G67600//RD2 GO:0019748 secondary metabolic process BP 0.0042022429459684 PYL1//SQD2//ATCAD6//CYP81F4//CYP81F3//CYP81F1//AT4G11190//AT1G66800//DHAR2//AT-HSFA6B//AT3G02250//AT1G20490//ATGSTU25//AT1G75900//ESB1//CYP79B3//ATGGH2//AT2G47890//LAC3//CYP711A1 GO:0042445 hormone metabolic process BP 0.00433703023330931 ROT3//CPI1//PYL1//PR5K//AT3G57010//SGR7//AT4G32860//BAT1//AT4G29270//LSH9//JAL34//AT1G80360//ATCKX5//CYP79B3 GO:0045454 cell redox homeostasis BP 0.00451736394157175 ATPDI11//CAT2//APR3//ROXY1//AT1G64500//AT2G24440//ATGRX2 GO:0050896 response to stimulus BP 0.00569543601746402 AtMYB70//ATPDI11//AT1G67720//AT4G17760//AARE//A/N-InvA//CAT2//HHP1//AT4G36550//ATCOL1//AT5G66560//SHI//ATDI8//ATMYB68//AT5G63710//ATMYB96//AT5G58300//AT5G55800//AT5G55610//DFL1//AT5G51770//CPI1//PYL1//MEE62//AT5G44920//AT5G44090//AT5G40470//PR5K//GORK//LSU2//ATYSL2//PHS1//EFO2//AGL15//ATFLS1//SMC6A//TFL-1//BLH9//AT5G01280//SQD2//ATTSC13//A11//ATPAP22//AtRLP44//PIRL4//CAT2//AT4G32780//BAT1//GGT3//AT2S3//ABCB2//AT4G24630//AT4G23740//AT4G22212//ATBRCA1//BAM3//AT4G11190//ATSPS4F//AT4G08780//DDB1A//ALN//AT4G03930//AT4G02940//ABA4//UGT71C3//ASF1A//DHAR2//ATMT3//ATMYB30//GAMMA-TIP2//AT1G54850//ATAIG1//DDI1//AT3G21770//AGC2-4//AHL19//ATTLP9//ATERDJ3A//ROXY1//AT3G02250//AT3G03510//JAL34//AT3G03790//JAL35//MLP165//MLP168//AT1G56520//AT1G64370//SAUR68//SRF6//AtOCT1//AT1G67600//AT1G80360//AT2G43550//AT1G44970//AT1G07590//ATCKX5//ARAC4//AT1G20030//NRT1.9//AT1G71870//ATCNGC7//UGT78D1//CIPK17//AT1G72890//LACS2//ATGSTU25//AT1G75990//AT1G64890//RD2//AT2G17060//ATWRKY1//AT2G40420//DML1//CYP79B3//ATGGH2//IMPA-4//ATG8C//CHD3//ATMLO7//AtGolS4//AT1G61660//AT1G51200//AAS//ATSYP112//ATCOR413-PM1//ANAC037//AT2G24230//PAG1//AT2G47890//AT2G23960//AT2G14900//AT2G26110//ABCG31//MAKR4//ATMES7//AT2G30810//CYP711A1 GO:0006664 glycolipid metabolic process BP 0.00587194931624586 SQD2//ATPAP22//ATSPS4F//AT3G03790//AtOCT1//AT1G67600//RD2 GO:0044550 secondary metabolite biosynthetic proces... BP 0.00590133808165541 PYL1//SQD2//ATCAD6//AT4G11190//AT1G66800//AT3G02250//AT1G75900//ESB1//CYP79B3//ATGGH2//AT2G47890//CYP711A1 GO:0000041 transition metal ion transport BP 0.00738245334212538 AT4G36610//ATMYB68//AT5G60530//CYP81F4//BAT1//AT4G22212//TET6//AHL19//NRT1.9//AT1G56145//EDA4 GO:0065008 regulation of biological quality BP 0.00746908035074809 ATPDI11//AT1G67720//ROT3//DFL1//CPI1//PYL1//PR5K//SMC6A//BLH9//AT3G57010//ATNEK6//SGR7//CAT2//AT4G32860//BAT1//AT4G29270//AT2S3//ABCB2//APR3//BAM3//LSH9//DDB1A//ASF1A//ATMT3//GAMMA-TIP2//LOG2//ROXY1//JAL34//AT1G80360//ATCKX5//ARAC4//AT1G64500//CYP79B3//AT2G24440//ATGRX2//CYP711A1 GO:1903509 liposaccharide metabolic process BP 0.00750924321194438 SQD2//ATPAP22//ATSPS4F//AT3G03790//AtOCT1//AT1G67600//RD2 GO:0009698 phenylpropanoid metabolic process BP 0.00760004264667522 ATCAD6//AT4G11190//AT1G66800//AT1G20490//ESB1//ATGGH2//AT2G47890//LAC3//CYP711A1 GO:0009699 phenylpropanoid biosynthetic process BP 0.00812346574889884 ATCAD6//AT4G11190//AT1G66800//ESB1//ATGGH2//AT2G47890//CYP711A1 GO:0042446 hormone biosynthetic process BP 0.00830636122913168 ROT3//CPI1//PYL1//PR5K//AT3G57010//AT4G32860//BAT1//AT4G29270//LSH9//JAL34//AT1G80360//CYP79B3 GO:0009813 flavonoid biosynthetic process BP 0.00921824302319268 AT5G63710//ATFLS1//A11//ATMT3//ATAIG1//AT1G64370//UGT78D1//AT1G61660//AT2G47890//CYP711A1 GO:0016109 tetraterpenoid biosynthetic process BP 0.0103438650769859 SQD2//ATK2//CAS1//CYP711A1 GO:0016117 carotenoid biosynthetic process BP 0.0103438650769859 SQD2//ATK2//CAS1//CYP711A1 GO:0006643 membrane lipid metabolic process BP 0.0104744942685775 SQD2//ATTSC13//ATPAP22//ATSPS4F//AT3G03790//AtOCT1//AT1G67600//RD2 GO:0009963 positive regulation of flavonoid biosynt... BP 0.0107590680772348 AT5G63710//ATMT3//AT1G64370//AT1G61660//AT2G47890//CYP711A1 GO:0016143 S-glycoside metabolic process BP 0.013414184895806 PYL1//SQD2//CYP81F4//CYP81F3//CYP81F1//AT3G02250//AT1G75900//CYP79B3 GO:0019757 glycosinolate metabolic process BP 0.013414184895806 PYL1//SQD2//CYP81F4//CYP81F3//CYP81F1//AT3G02250//AT1G75900//CYP79B3 GO:0019760 glucosinolate metabolic process BP 0.013414184895806 PYL1//SQD2//CYP81F4//CYP81F3//CYP81F1//AT3G02250//AT1G75900//CYP79B3 GO:0006816 calcium ion transport BP 0.0139192589103103 ATTSC13//ATECA2//GAMMA-TIP2//AT3G02250//JAL35 GO:0046148 pigment biosynthetic process BP 0.0142348028101865 ATFLS1//SQD2//A11//ATK2//ATAIG1//UGT78D1//CAS1//CYP711A1 GO:0006812 cation transport BP 0.0170385440289091 AT4G36610//ATMYB68//AT5G60530//GORK//ATTSC13//AHA8//CYP81F4//BAT1//AT4G22212//ATECA2//TET6//GAMMA-TIP2//AHL19//AT3G02250//JAL35//NRT1.9//AT1G56145//AT1G68710//EDA4//IMPA-4//ATGRX2 GO:0006811 ion transport BP 0.0177421801061254 CAT2//AT4G36610//ATMYB68//AT5G60530//GORK//ATTSC13//AHA8//CYP81F4//BAT1//AT4G22212//ATECA2//TET6//GAMMA-TIP2//AHL19//AT3G02250//JAL34//JAL35//AtOCT1//NRT1.9//AT1G56145//AT1G68710//EDA4//AT1G13970//AT2G40420//IMPA-4//AtGABP//ATGRX2 GO:0030001 metal ion transport BP 0.0186799793474487 AT4G36610//ATMYB68//AT5G60530//GORK//ATTSC13//CYP81F4//BAT1//AT4G22212//ATECA2//TET6//GAMMA-TIP2//AHL19//AT3G02250//JAL35//NRT1.9//AT1G56145//EDA4 GO:0034754 cellular hormone metabolic process BP 0.0198325249880082 PYL1//PR5K//AT4G32860//LSH9//AT1G80360//ATCKX5//CYP79B3 GO:0009962 regulation of flavonoid biosynthetic pro... BP 0.0199051843438705 AT5G63710//ATMT3//AT1G64370//AT1G61660//AT2G47890//CYP711A1 GO:0042430 indole-containing compound metabolic pro... BP 0.0213322929907476 PYL1//CYP81F4//CYP81F3//CYP81F1//AT1G80360//CYP79B3 GO:0009812 flavonoid metabolic process BP 0.0249566759684796 AT5G63710//ATFLS1//A11//ATMT3//ATAIG1//AT1G64370//UGT78D1//AT1G61660//AT2G47890//CYP711A1 GO:0006575 cellular modified amino acid metabolic p... BP 0.0253652052968651 A11//AT4G35820//GGT3//AT2G24580//ATGGH2 GO:0009267 cellular response to starvation BP 0.0258391226255932 SQD2//ATPAP22//CAT2//BAT1//ALN//ATAIG1//AT3G03790//AtOCT1//AT1G67600//NRT1.9//RD2 GO:0008610 lipid biosynthetic process BP 0.0258573657421984 ROT3//CPI1//AT5G38020//SQD2//AT3G57010//ATTSC13//ATPAP22//BAT1//AT4G29270//ATK2//ATSPS4F//ABA4//ATMYB30//ATERDJ3A//JAL34//AT3G03790//AtOCT1//AT1G67600//LACS2//RD2//AT2G40420//CYP79B3//ATG8C//AT2G18620//CAS1//CYP711A1 GO:0031668 cellular response to extracellular stimu... BP 0.0262331445913399 SQD2//ATPAP22//CAT2//BAT1//ALN//ATAIG1//AT3G03790//AtOCT1//AT1G67600//NRT1.9//RD2//ATCOR413-PM1 GO:0071496 cellular response to external stimulus BP 0.0271818389164879 SQD2//ATPAP22//CAT2//BAT1//ALN//ATAIG1//AT3G03790//AtOCT1//AT1G67600//NRT1.9//RD2//ATCOR413-PM1 GO:0006636 unsaturated fatty acid biosynthetic proc... BP 0.0278697750014469 SQD2//CYP79B3//CAS1 GO:0033559 unsaturated fatty acid metabolic process BP 0.0278697750014469 SQD2//CYP79B3//CAS1 GO:0007167 enzyme linked receptor protein signaling... BP 0.0295373248873421 AT5G63710//AT5G58300//MEE62//AT4G23740//BAM3//SRF6//AT2G24230 GO:0007169 transmembrane receptor protein tyrosine ... BP 0.0295373248873421 AT5G63710//AT5G58300//MEE62//AT4G23740//BAM3//SRF6//AT2G24230 GO:0031669 cellular response to nutrient levels BP 0.0300240122584111 SQD2//ATPAP22//CAT2//BAT1//ALN//ATAIG1//AT3G03790//AtOCT1//AT1G67600//NRT1.9//RD2 GO:0042594 response to starvation BP 0.0300240122584111 SQD2//ATPAP22//CAT2//BAT1//ALN//ATAIG1//AT3G03790//AtOCT1//AT1G67600//NRT1.9//RD2 GO:0019725 cellular homeostasis BP 0.0305942916944323 ATPDI11//CAT2//APR3//ATMT3//GAMMA-TIP2//ROXY1//AT1G64500//AT2G24440//ATGRX2 GO:0006952 defense response BP 0.032501622373717 ATPDI11//AT1G67720//AT4G36550//AT5G63710//AT5G51770//MEE62//AT5G44920//AT5G40470//LSU2//SMC6A//BLH9//AT4G22212//AT4G11190//ATMT3//ATMYB30//GAMMA-TIP2//AHL19//ROXY1//MLP165//MLP168//AT1G56520//AT1G64370//AT2G43550//AT1G72890//LACS2//AT2G17060//CYP79B3//IMPA-4//ATMLO7//AT1G61660//AT2G23960//ATMES7//CYP711A1 GO:0048583 regulation of response to stimulus BP 0.0327494261187001 AT4G36550//ATCOL1//AT5G63710//MEE62//AT5G40470//LSU2//PHS1//AGL15//ABCB2//DDB1A//ATMT3//AT1G64370//CYP79B3//IMPA-4//CHD3//AT1G61660//CYP711A1 GO:0009739 response to gibberellin BP 0.032810476632471 SHI//ATMYB68//PIRL4//ATMYB30//CHD3//AT2G14900//AT2G30810 GO:0042592 homeostatic process BP 0.0329903750065395 ATPDI11//ROT3//DFL1//SGR7//CAT2//APR3//ATMT3//GAMMA-TIP2//LOG2//ROXY1//AT1G64500//AT2G24440//ATGRX2 GO:0098656 anion transmembrane transport BP 0.0343155465684542 CAT2//AHL19//AT1G13970//AtGABP GO:0009991 response to extracellular stimulus BP 0.0345337638407062 SQD2//ATPAP22//CAT2//BAT1//ALN//ATAIG1//AT3G03790//AtOCT1//AT1G67600//NRT1.9//RD2//ATCOR413-PM1 GO:1901657 glycosyl compound metabolic process BP 0.035910645616652 PYL1//SQD2//AHA8//CYP81F4//CYP81F3//CYP81F1//ATECA2//AT3G02250//AT1G75900//AT1G79470//CYP79B3 GO:0009690 cytokinin metabolic process BP 0.0373746851818818 PR5K//AT4G32860//LSH9//ATCKX5 GO:0031667 response to nutrient levels BP 0.0398089337024731 SQD2//ATPAP22//CAT2//BAT1//ALN//ATAIG1//AT3G03790//AtOCT1//AT1G67600//NRT1.9//RD2 GO:1901659 glycosyl compound biosynthetic process BP 0.0409637404445852 PYL1//SQD2//AHA8//ATECA2//AT3G02250//AT1G75900//AT1G79470//CYP79B3 GO:0045930 negative regulation of mitotic cell cycl... BP 0.0421807235924949 SGR7//ASF1A GO:0009691 cytokinin biosynthetic process BP 0.0448730037084482 PR5K//AT4G32860//LSH9 GO:0006950 response to stress BP 0.046118583751378 ATPDI11//AT1G67720//AT4G17760//A/N-InvA//HHP1//AT4G36550//ATCOL1//ATDI8//AT5G63710//ATMYB96//AT5G51770//MEE62//AT5G44920//AT5G40470//GORK//LSU2//SMC6A//BLH9//AT5G01280//SQD2//ATTSC13//ATPAP22//CAT2//BAT1//AT2S3//ABCB2//AT4G22212//ATBRCA1//AT4G11190//ATSPS4F//AT4G08780//DDB1A//ALN//AT4G03930//ASF1A//ATMT3//ATMYB30//GAMMA-TIP2//AT1G54850//ATAIG1//AT3G21770//AHL19//ATERDJ3A//ROXY1//AT3G02250//JAL34//AT3G03790//JAL35//MLP165//MLP168//AT1G56520//AT1G64370//AtOCT1//AT1G67600//AT2G43550//AT1G44970//NRT1.9//AT1G72890//LACS2//AT1G75990//AT1G64890//RD2//AT2G17060//DML1//CYP79B3//ATGGH2//IMPA-4//ATG8C//ATMLO7//AtGolS4//AT1G61660//AAS//ATSYP112//ATCOR413-PM1//PAG1//AT2G47890//AT2G23960//ATMES7//CYP711A1 GO:0006629 lipid metabolic process BP 0.0498657168944841 CAT2//ROT3//CPI1//AT5G38020//AGL15//SQD2//AT3G57010//ATTSC13//ATPAP22//AT3G48460//AT4G37380//BAT1//AT4G29270//ATK2//ATSPS4F//ABA4//ATMYB30//ATERDJ3A//JAL34//AT3G03790//AtOCT1//AT1G67600//AT1G71870//EDA17//LACS2//AT1G75890//AT1G75900//AT2G03980//RD2//AT2G40420//CYP79B3//ATG8C//AT2G18620//CAS1//CYP86A8//AT2G38180//CYP711A1 GO:0006760 folic acid-containing compound metabolic... BP 0.0504343232446617 AT2G24580//ATGGH2 GO:0042558 pteridine-containing compound metabolic ... BP 0.0504343232446617 AT2G24580//ATGGH2 GO:2000034 regulation of seed maturation BP 0.0504343232446617 ATET2//AGL15 GO:0006790 sulfur compound metabolic process BP 0.0534405292759539 CPI1//OLD5//PYL1//SQD2//ATPRP4//CYP81F4//CYP81F3//CYP81F1//GGT3//ATK2//APR3//GAMMA-TIP2//AT3G02250//JAL35//AT1G80360//AT1G75900//CYP79B3 GO:0005985 sucrose metabolic process BP 0.0592103794559763 A/N-InvA//ATSPS4F GO:0009900 dehiscence BP 0.0592103794559763 AGL15//ACI1 GO:0010100 negative regulation of photomorphogenesi... BP 0.0592103794559763 ATCOL1//DDB1A GO:0010143 cutin biosynthetic process BP 0.0592103794559763 DCR//LACS2 GO:0007166 cell surface receptor signaling pathway BP 0.0599876103644917 AT5G63710//AT5G58300//MEE62//AT4G23740//BAM3//SRF6//AT2G24230 GO:0009127 purine nucleoside monophosphate biosynth... BP 0.0602939415439136 AHA8//ATECA2//AT1G79470 GO:0009168 purine ribonucleoside monophosphate bios... BP 0.0602939415439136 AHA8//ATECA2//AT1G79470 GO:0055114 oxidation-reduction process BP 0.0607798619824818 AT1G35190//CAT2//ROT3//AT5G55800//AT5G55610//OLD5//APAO//ATFLS1//CYP93D1//ATCAD6//CYP81F4//CYP81F3//CYP81F1//AT4G35820//CAT2//AT4G25830//APR3//AT4G08780//AT4G02940//AT3G21770//AT1G80320//AT1G44970//ATCKX5//EDA17//AT1G14130//CYP77B1//AT1G79470//AT2G24580//CYP86A8//LAC3//CYP711A1 GO:0051716 cellular response to stimulus BP 0.0670274455037886 AtMYB70//ATPDI11//AT1G67720//AT4G17760//AT4G36550//ATCOL1//SHI//AT5G63710//AT5G58300//AT5G55800//DFL1//AT5G51770//PYL1//MEE62//AT5G44920//PHS1//AGL15//SMC6A//BLH9//SQD2//ATPAP22//AtRLP44//PIRL4//CAT2//AT4G32780//BAT1//GGT3//ABCB2//AT4G23740//ATBRCA1//BAM3//AT4G11190//DDB1A//ALN//UGT71C3//ASF1A//ATMT3//ATMYB30//ATAIG1//ATERDJ3A//ROXY1//AT3G03790//AT1G56520//AT1G64370//SRF6//AtOCT1//AT1G67600//ARAC4//NRT1.9//CIPK17//AT1G72890//RD2//AT2G17060//ATWRKY1//DML1//CYP79B3//IMPA-4//ATG8C//CHD3//AT1G61660//ATCOR413-PM1//AT2G24230//CYP711A1 GO:0042762 regulation of sulfur metabolic process BP 0.0684648147781174 OLD5//AT1G80360 GO:0033554 cellular response to stress BP 0.0684967957134786 ATPDI11//AT4G17760//ATCOL1//AT5G63710//AT5G51770//SMC6A//SQD2//ATPAP22//CAT2//BAT1//ATBRCA1//DDB1A//ALN//ASF1A//ATMT3//ATMYB30//ATAIG1//ATERDJ3A//AT3G03790//AT1G64370//AtOCT1//AT1G67600//NRT1.9//RD2//DML1//CYP79B3//IMPA-4//ATG8C//AT1G61660//ATCOR413-PM1//CYP711A1 GO:0009805 coumarin biosynthetic process BP 0.071768719031285 ATGGH2//AT2G47890//CYP711A1 GO:0042451 purine nucleoside biosynthetic process BP 0.071768719031285 AHA8//ATECA2//AT1G79470 GO:0046129 purine ribonucleoside biosynthetic proce... BP 0.071768719031285 AHA8//ATECA2//AT1G79470 GO:0016132 brassinosteroid biosynthetic process BP 0.0746474135621322 ROT3//CPI1//AT3G57010//BAT1//AT4G29270//JAL34 GO:0009074 aromatic amino acid family catabolic pro... BP 0.0778454902087179 PYL1//CYP79B3//AAS GO:0009804 coumarin metabolic process BP 0.0778454902087179 ATGGH2//AT2G47890//CYP711A1 GO:0009808 lignin metabolic process BP 0.0778454902087179 ATCAD6//AT1G66800//LAC3 GO:0016129 phytosteroid biosynthetic process BP 0.0779083838277797 ROT3//CPI1//AT3G57010//BAT1//AT4G29270//JAL34 GO:0006995 cellular response to nitrogen starvation BP 0.0781559053729034 CAT2//ALN GO:0010025 wax biosynthetic process BP 0.0781559053729034 ATTSC13//LACS2 GO:0010223 secondary shoot formation BP 0.0781559053729034 BLH9//CYP711A1 GO:0010346 shoot axis formation BP 0.0781559053729034 BLH9//CYP711A1 GO:0043622 cortical microtubule organization BP 0.0781559053729034 PHS1//ATNEK6 GO:0016131 brassinosteroid metabolic process BP 0.0812486231373536 ROT3//CPI1//AT3G57010//BAT1//AT4G29270//JAL34 GO:0031347 regulation of defense response BP 0.0818161982170704 AT4G36550//AT5G63710//MEE62//AT5G40470//LSU2//ATMT3//AT1G64370//CYP79B3//IMPA-4//AT1G61660//CYP711A1 GO:0042744 hydrogen peroxide catabolic process BP 0.0841393084257802 CAT2//ABA4//GAMMA-TIP2 GO:0016128 phytosteroid metabolic process BP 0.0846677864200513 ROT3//CPI1//AT3G57010//BAT1//AT4G29270//JAL34 GO:0007030 Golgi organization BP 0.0851193266893097 ATTSC13//GAMMA-TIP2//AT3G02250//JAL35//PAG1 GO:0043603 cellular amide metabolic process BP 0.0857706165501594 GGT3//ALN//AT2G24580//ATGGH2 GO:0010166 wax metabolic process BP 0.0882441734562337 ATTSC13//LACS2 GO:0031122 cytoplasmic microtubule organization BP 0.0882441734562337 PHS1//ATNEK6 GO:0043562 cellular response to nitrogen levels BP 0.0882441734562337 CAT2//ALN