GOID TERM ONTOLOGY pValue Genes GO:0032270 positive regulation of cellular protein ... BP 0.0113660170264004 SVR7//MHK GO:0051247 positive regulation of protein metabolic... BP 0.0135056328456822 SVR7//MHK GO:1901658 glycosyl compound catabolic process BP 0.0158050595951545 AtNSP5//AtNIT3 GO:0009691 cytokinin biosynthetic process BP 0.0208625489974873 AT3G47210//AT4G32860 GO:0010468 regulation of gene expression BP 0.0214174592929771 TFIIB//SVR7//AT1G16680//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//CLF//ATDOF2.4 GO:1901136 carbohydrate derivative catabolic proces... BP 0.023610508789458 AtNSP5//AtNIT3 GO:0010556 regulation of macromolecule biosynthetic... BP 0.038357548357275 TFIIB//SVR7//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:2000112 regulation of cellular macromolecule bio... BP 0.038357548357275 TFIIB//SVR7//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0006352 DNA-templated transcription, initiation BP 0.0393506269358382 ATSIG5//TAF12 GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.0393506269358382 AtGulLO3//ATFMN/FHY GO:0060255 regulation of macromolecule metabolic pr... BP 0.0404646738895223 TFIIB//SVR7//AT1G16680//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//CLF//ATDOF2.4 GO:0006417 regulation of translation BP 0.042866863020746 SVR7//MHK GO:0006767 water-soluble vitamin metabolic process BP 0.042866863020746 AtGulLO3//ATFMN/FHY GO:0009690 cytokinin metabolic process BP 0.042866863020746 AT3G47210//AT4G32860 GO:0031326 regulation of cellular biosynthetic proc... BP 0.0467830091280952 TFIIB//SVR7//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0009889 regulation of biosynthetic process BP 0.0485075676030896 TFIIB//SVR7//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATPAL2//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0009110 vitamin biosynthetic process BP 0.0540747730016129 AtGulLO3//ATFMN/FHY GO:0046165 alcohol biosynthetic process BP 0.0588401840297033 ROT3//AACT1//ATSIG5//ATKCR2//AT2G35733 GO:0048638 regulation of developmental growth BP 0.060467793244529 TFIIB//ULT//FAF4//AT2G28240 GO:0080129 proteasome core complex assembly BP 0.0620558707100763 AtNSP5//AT4G28440 GO:0010075 regulation of meristem growth BP 0.0642024250266778 ULT//FAF4//AT2G28240 GO:0010467 gene expression BP 0.0668815602989143 TFIIB//SVR7//AT1G16680//AtbZIP3//TGA1//AT//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//MHK//RAP2.4//At-RSZ22a//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//TIF3H1//AT1G60380//ARF11//ATWRKY44//RGA//CLF//ATDOF2.4 GO:0035266 meristem growth BP 0.0693484019513458 ULT//FAF4//AT2G28240 GO:0006355 regulation of transcription, DNA-templat... BP 0.0756667820247267 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:1903506 regulation of nucleic acid-templated tra... BP 0.0756667820247267 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:2001141 regulation of RNA biosynthetic process BP 0.0756667820247267 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0051252 regulation of RNA metabolic process BP 0.0789239080422508 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0006366 transcription from RNA polymerase II pro... BP 0.079103796983706 TFIIB//TAF12 GO:0010218 response to far red light BP 0.079103796983706 ATSIG5//RGA GO:0046467 membrane lipid biosynthetic process BP 0.0801795913218075 ATSPS2F//ATFMN/FHY//ATKCR2 GO:0080090 regulation of primary metabolic process BP 0.0823002453252027 TFIIB//SVR7//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATPAL2//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0040008 regulation of growth BP 0.0866700869548116 TFIIB//ULT//FAF4//AT2G28240 GO:0034754 cellular hormone metabolic process BP 0.0916970791257006 AT3G47210//AT4G32860//AT1G49500 GO:0009308 amine metabolic process BP 0.0980059661913591 ATPAL2//AT3G47210//AT4G32860//AT1G49500 GO:0006351 transcription, DNA-templated BP 0.0984474503858897 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0097659 nucleic acid-templated transcription BP 0.0984474503858897 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0032774 RNA biosynthetic process BP 0.0991950487053364 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0010207 photosystem II assembly BP 0.102162542254668 ATSIG5//TOC75-I GO:0019219 regulation of nucleobase-containing comp... BP 0.104399732310254 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0019222 regulation of metabolic process BP 0.107344096256921 TFIIB//SVR7//AT1G16680//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATPAL2//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//CLF//ATDOF2.4 GO:0031323 regulation of cellular metabolic process BP 0.109040820855247 TFIIB//SVR7//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//MHK//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0006643 membrane lipid metabolic process BP 0.110168829636268 ATSPS2F//ATFMN/FHY//ATKCR2 GO:1901617 organic hydroxy compound biosynthetic pr... BP 0.111529039714856 ROT3//AACT1//ATSIG5//UGT78D1//ATKCR2//AT2G35733 GO:0006766 vitamin metabolic process BP 0.111847714465426 AtGulLO3//ATFMN/FHY GO:0009739 response to gibberellin BP 0.116623073037797 AT3G16350//AT1G74840//RGA GO:0051171 regulation of nitrogen compound metaboli... BP 0.116777096150235 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0009074 aromatic amino acid family catabolic pro... BP 0.116777317990127 ATPAL2//AT1G49500 GO:0048581 negative regulation of post-embryonic de... BP 0.116777317990127 AGL25//RGA GO:0009409 response to cold BP 0.121696198883129 ATCYSA//AGL25//ATERF#011//RAP2.4//AT1G64890//ATCOR413-PM1//CLF GO:0043248 proteasome assembly BP 0.121761182467563 AtNSP5//AT4G28440 GO:0051788 response to misfolded protein BP 0.121761182467563 AtNSP5//AT4G28440 GO:0009266 response to temperature stimulus BP 0.122656354661058 ATCYSA//AGL25//AT5G04760//ATERF#011//RAP2.4//AT1G64890//ATCOR413-PM1//RGA//CLF GO:0048509 regulation of meristem development BP 0.129943374234725 ULT//FAF4//AT2G28240 GO:0006066 alcohol metabolic process BP 0.13137641292468 ROT3//AACT1//ATSIG5//ATKCR2//AT2G35733 GO:0042446 hormone biosynthetic process BP 0.133143795331869 ROT3//AT3G47210//AT4G32860//AT1G49500 GO:0008272 sulfate transport BP 0.14114151296225 244_ GO:0009631 cold acclimation BP 0.14114151296225 480_ GO:0009970 cellular response to sulfate starvation BP 0.14114151296225 677_ GO:0010187 negative regulation of seed germination BP 0.14114151296225 331_ GO:0010229 inflorescence development BP 0.14114151296225 811_ GO:0046519 sphingoid metabolic process BP 0.14114151296225 012_ GO:0046520 sphingoid biosynthetic process BP 0.14114151296225 012_ GO:0045454 cell redox homeostasis BP 0.142185771489108 CBSX1//APRL5 GO:0051241 negative regulation of multicellular org... BP 0.142185771489108 AGL25//RGA GO:0006396 RNA processing BP 0.148258945118674 TFIIB//SVR7//AT1G16680//AT//At-RSZ22a//TAF12 GO:0006694 steroid biosynthetic process BP 0.165379610051433 ROT3//AACT1//ATKCR2 GO:0042445 hormone metabolic process BP 0.166793787927414 ROT3//AT3G47210//AT4G32860//AT1G49500 GO:0005985 sucrose metabolic process BP 0.166902101620395 904_ GO:0009960 endosperm development BP 0.166902101620395 114_ GO:0030148 sphingolipid biosynthetic process BP 0.166902101620395 012_ GO:0072348 sulfur compound transport BP 0.166902101620395 244_ GO:0019374 galactolipid metabolic process BP 0.168630094439534 ATSPS2F//ATFMN/FHY GO:0019375 galactolipid biosynthetic process BP 0.168630094439534 ATSPS2F//ATFMN/FHY GO:0034654 nucleobase-containing compound biosynthe... BP 0.17316209794553 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0044271 cellular nitrogen compound biosynthetic ... BP 0.175068248737942 TFIIB//AtbZIP3//TGA1//AtNSP5//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G49500//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0051246 regulation of protein metabolic process BP 0.180288114393429 SVR7//MHK//RGA GO:0009753 response to jasmonic acid BP 0.181846704850754 AT1G28190//ATMYB64//AT3G16350//AT1G74840//RGA GO:0016070 RNA metabolic process BP 0.183971542217501 TFIIB//SVR7//AT1G16680//AtbZIP3//TGA1//AT//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATERF#011//ATFMN/FHY//RAP2.4//At-RSZ22a//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0006807 nitrogen compound metabolic process BP 0.185638804104205 TFIIB//SVR7//AT1G16680//AtbZIP3//TGA1//AtNSP5//AT//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//LOG4//ATPAL2//ATERF#011//AT3G49830//AT3G47210//AtNIT3//AT4G32860//ATFMN/FHY//ATMSRB5//RAP2.4//At-RSZ22a//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G49500//AT1G60380//ATKCR2//ARF11//ATWRKY44//RGA//CLF//ATDOF2.4 GO:1901362 organic cyclic compound biosynthetic pro... BP 0.18700927782407 TFIIB//ROT3//AtbZIP3//TGA1//AACT1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATPAL2//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G49500//AT1G60380//ATKCR2//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0008202 steroid metabolic process BP 0.191702636006555 ROT3//AACT1//ATKCR2 GO:0009913 epidermal cell differentiation BP 0.19189617206072 954_ GO:0030855 epithelial cell differentiation BP 0.19189617206072 954_ GO:0009751 response to salicylic acid BP 0.192198993957635 AT1G28190//TGA1//ATMYB64//AT1G74840//RGA GO:0008380 RNA splicing BP 0.203296193948233 TFIIB//At-RSZ22a//TAF12 GO:0008544 epidermis development BP 0.20411285942238 954_ GO:0009269 response to desiccation BP 0.20411285942238 480_ GO:0060429 epithelium development BP 0.20411285942238 954_ GO:0018130 heterocycle biosynthetic process BP 0.20685139979537 TFIIB//AtbZIP3//TGA1//ATSIG5//ATMYB64//AGL25//AT5G04760//AT3G54390//ATPAL2//ATERF#011//ATFMN/FHY//RAP2.4//emb1974//TAF12//AT3G16350//ARF17//AT1G74840//AT1G49500//AT1G60380//ARF11//ATWRKY44//RGA//ATDOF2.4 GO:0000394 RNA splicing, via endonucleolytic cleava... BP 0.206857295426333 TFIIB//TAF12 GO:0009247 glycolipid biosynthetic process BP 0.206857295426333 ATSPS2F//ATFMN/FHY GO:0010048 vernalization response BP 0.206857295426333 AGL25//CLF GO:0010260 organ senescence BP 0.206857295426333 TGA1//AT2G37150 GO:0046686 response to cadmium ion BP 0.209405445202779 AtNIT3//AT3G16350//AT1G74840//RGA GO:0009414 response to water deprivation BP 0.213511030445068 ATCYSA//ATERF#011//RAP2.4//AT1G64890//ATCOR413-PM1 GO:0006665 sphingolipid metabolic process BP 0.216146349464575 012_ GO:0009894 regulation of catabolic process BP 0.216146349464575 331_ GO:2000241 regulation of reproductive process BP 0.218923759741033 TFIIB//AGL25//ULT//RGA GO:0009415 response to water BP 0.221695091462189 ATCYSA//ATERF#011//RAP2.4//AT1G64890//ATCOR413-PM1 GO:0010038 response to metal ion BP 0.221695091462189 TGA1//AtNIT3//AT3G16350//AT1G74840//RGA