4.0:Analysis result:Information of module
Whole root - low pH 48H

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:1902170
cellular response to reactive nitrogen s...
BP3.790e-03AT1G21140 ATMYB72
GO:0048509
regulation of meristem development
BP6.553e-03AT2G45340 GDPDL4 AGL19 AT1G54450
GO:0071281
cellular response to iron ion
BP7.478e-03AT1G21140 ATMYB72
GO:1901699
cellular response to nitrogen compound
BP8.121e-03ACP AT1G21140 ATMYB72 LYK4
GO:0048507
meristem development
BP9.563e-03AT2G45340 AGL10 GDPDL4 AT4G28650 AGL19 AT1G54450
GO:0071248
cellular response to metal ion
BP1.097e-02AT1G21140 ATMYB72
GO:0034614
cellular response to reactive oxygen spe...
BP1.363e-02AT1G21140 ATMYB72
GO:0071241
cellular response to inorganic substance
BP1.363e-02AT1G21140 ATMYB72
GO:0010073
meristem maintenance
BP1.961e-02AT2G45340 AGL10 GDPDL4 AT1G54450
GO:0010075
regulation of meristem growth
BP2.161e-02AT2G45340 GDPDL4 AT1G54450
GO:0048638
regulation of developmental growth
BP2.206e-02AT2G45340 GDPDL4 AT1G54450 APC10
GO:0010039
response to iron ion
BP2.305e-02AT1G21140 ATMYB72
GO:0035266
meristem growth
BP2.440e-02AT2G45340 GDPDL4 AT1G54450
GO:0034599
cellular response to oxidative stress
BP2.482e-02AT1G21140 ATMYB72
GO:0040008
regulation of growth
BP2.975e-02AT2G45340 GDPDL4 AT1G54450 APC10
GO:0007165
signal transduction
BP3.133e-02AT2G45340 AT5G25510 AtbZIP5 AT4G28650 ABI1 AT4G12010 AT4G02180 ATB AT1G69550 AT3G23190 ARA-2 AT1G44050 ATMYB72 TTL3 AT2G37800
GO:0006417
regulation of translation
BP3.445e-02ATMAP4K AtIDD5
GO:0009832
plant-type cell wall biogenesis
BP3.506e-02GDPDL4 I9H TTL3
GO:0071369
cellular response to ethylene stimulus
BP3.506e-02ABI1 AT1G21140 ATMYB72
GO:0007033
vacuole organization
BP3.864e-02AP-3 ATB
GO:0023052
signaling
BP4.132e-02AT2G45340 AT5G25510 AtbZIP5 AT4G28650 ABI1 AT4G12010 AT4G02180 ATB AT1G69550 AT3G23190 ARA-2 AT1G44050 ATMYB72 TTL3 AT2G37800
GO:0044700
single organism signaling
BP4.132e-02AT2G45340 AT5G25510 AtbZIP5 AT4G28650 ABI1 AT4G12010 AT4G02180 ATB AT1G69550 AT3G23190 ARA-2 AT1G44050 ATMYB72 TTL3 AT2G37800
GO:0065007
biological regulation
BP5.741e-02AT2G45340 FPS2 AGL10 ATIPT9 AT5G25510 GDPDL4 AP-3 AtbZIP5 AT4G36210 AT4G28650 ABI1 AGL19 AT4G12010 AT4G02180 AtWRKY47 ATB AT1G69550 AGL103 AT3G23190 AT3G19850 HAT3.1 ACP ARA-2 AT1G44050 ATMAP4K ATMYB72 AT1G54450 TTL3 APC10 AT2G27290 AT2G37800 AtIDD5 ATSMO2
GO:0006084
acetyl-CoA metabolic process
BP7.005e-02FPS2 ATSMO2
GO:0071669
plant-type cell wall organization or bio...
BP7.056e-02GDPDL4 ATHRGP1 ATEXLA1 I9H TTL3
GO:0006637
acyl-CoA metabolic process
BP7.273e-02FPS2 ATSMO2
GO:0035383
thioester metabolic process
BP7.273e-02FPS2 ATSMO2
GO:0010048
vernalization response
BP7.818e-02AGL10 AGL19
GO:0048518
positive regulation of biological proces...
BP8.666e-02AGL10 GDPDL4 AT4G12010 HAT3.1 ATMAP4K ATMYB72 AT2G27290 AtIDD5
GO:0048440
carpel development
BP8.774e-02AGL10 AGL19 AT4G02180
GO:0006661
phosphatidylinositol biosynthetic proces...
BP8.944e-02AT1G11880 AT2G27290
GO:0003002
regionalization
BP8.957e-02AT4G02180 AT1G54450 TTL3
GO:0032270
positive regulation of cellular protein ...
BP9.071e-02316_
GO:0042214
terpene metabolic process
BP9.071e-02092_
GO:0051053
negative regulation of DNA metabolic pro...
BP9.071e-02336_
GO:0050793
regulation of developmental process
BP9.093e-02AT2G45340 AGL10 GDPDL4 ABI1 AGL19 AT1G54450 APC10
GO:0009733
response to auxin
BP9.217e-02ABI1 AT1G48670 ARA-2 TTL3
GO:0006972
hyperosmotic response
BP9.326e-02ABI1 ATHVA22C ATMAP4K
GO:2000026
regulation of multicellular organismal d...
BP9.716e-02AT2G45340 AGL10 GDPDL4 ABI1 AGL19 AT1G54450
GO:0048467
gynoecium development
BP9.893e-02AGL10 AGL19 AT4G02180
GO:0009691
cytokinin biosynthetic process
BP9.932e-02152_
GO:0051247
positive regulation of protein metabolic...
BP9.932e-02316_
GO:0051783
regulation of nuclear division
BP9.932e-02336_
GO:0055067
monovalent inorganic cation homeostasis
BP9.932e-02808_
GO:0009891
positive regulation of biosynthetic proc...
BP1.021e-01AT4G12010 HAT3.1 ATMAP4K AT2G27290 AtIDD5
GO:0035966
response to topologically incorrect prot...
BP1.024e-01AtbZIP5 ABI1 AT3G27240 APC10
GO:0043473
pigmentation
BP1.042e-01AGL10 AGL19
GO:0043476
pigment accumulation
BP1.042e-01AGL10 AGL19
GO:0043478
pigment accumulation in response to UV l...
BP1.042e-01AGL10 AGL19
GO:0043479
pigment accumulation in tissues in respo...
BP1.042e-01AGL10 AGL19
GO:0043480
pigment accumulation in tissues
BP1.042e-01AGL10 AGL19
GO:0043481
anthocyanin accumulation in tissues in r...
BP1.042e-01AGL10 AGL19
GO:1990267
response to transition metal nanoparticl...
BP1.042e-01AT1G21140 ATMYB72
GO:0051716
cellular response to stimulus
BP1.065e-01AT2G45340 AT5G25510 TRFL10 AtbZIP5 AT4G28650 ABI1 AT4G12010 AT4G02180 ATB AT1G69550 AT3G23190 ACP ARA-2 AT1G44050 AT1G21140 ATMYB72 TTL3 AT2G37800 LYK4
GO:0000097
sulfur amino acid biosynthetic process
BP1.067e-01AT5G65760 GSTL3 AT1G42960
GO:0016132
brassinosteroid biosynthetic process
BP1.102e-01FPS2 ATSMO2
GO:0051239
regulation of multicellular organismal p...
BP1.124e-01AT2G45340 AGL10 GDPDL4 ABI1 AGL19 AT1G54450
GO:0002237
response to molecule of bacterial origin
BP1.133e-01AT4G28650 LYK4
GO:0007167
enzyme linked receptor protein signaling...
BP1.133e-01AT2G45340 AT4G28650
GO:0007169
transmembrane receptor protein tyrosine ...
BP1.133e-01AT2G45340 AT4G28650
GO:0016129
phytosteroid biosynthetic process
BP1.133e-01FPS2 ATSMO2
GO:0035556
intracellular signal transduction
BP1.147e-01ABI1 AT4G02180 ARA-2 AT1G44050 ATMYB72 AT2G37800
GO:0050794
regulation of cellular process
BP1.150e-01AT2G45340 AGL10 AT5G25510 GDPDL4 AtbZIP5 AT4G36210 AT4G28650 ABI1 AGL19 AT4G12010 AT4G02180 AtWRKY47 ATB AT1G69550 AGL103 AT3G23190 HAT3.1 ARA-2 AT1G44050 ATMAP4K ATMYB72 TTL3 APC10 AT2G27290 AT2G37800 AtIDD5
GO:0006071
glycerol metabolic process
BP1.163e-01085_
GO:0006790
sulfur compound metabolic process
BP1.202e-01FPS2 AT5G65760 GSTL3 AT1G42960 ATSMO2
GO:0010103
stomatal complex morphogenesis
BP1.226e-01GDPDL4 AT4G28650
GO:0016131
brassinosteroid metabolic process
BP1.226e-01FPS2 ATSMO2
GO:0009682
induced systemic resistance
BP1.247e-01091_
GO:0009894
regulation of catabolic process
BP1.247e-01336_
GO:0019400
alditol metabolic process
BP1.247e-01085_
GO:0032875
regulation of DNA endoreduplication
BP1.247e-01336_
GO:0007154
cell communication
BP1.249e-01AT2G45340 AT5G25510 AtbZIP5 AT4G28650 ABI1 AT4G12010 AT4G02180 ATB AT1G69550 AT3G23190 ARA-2 AT1G44050 ATMYB72 TTL3 AT2G37800
GO:0006486
protein glycosylation
BP1.250e-01ATMAP4K I9H AT1G10730
GO:0009101
glycoprotein biosynthetic process
BP1.250e-01ATMAP4K I9H AT1G10730
GO:0043413
macromolecule glycosylation
BP1.250e-01ATMAP4K I9H AT1G10730
GO:0050789
regulation of biological process
BP1.255e-01AT2G45340 AGL10 AT5G25510 GDPDL4 AtbZIP5 AT4G36210 AT4G28650 ABI1 AGL19 AT4G12010 AT4G02180 AtWRKY47 ATB AT1G69550 AGL103 AT3G23190 AT3G19850 HAT3.1 ACP ARA-2 AT1G44050 ATMAP4K ATMYB72 AT1G54450 TTL3 APC10 AT2G27290 AT2G37800 AtIDD5
GO:0016128
phytosteroid metabolic process
BP1.257e-01FPS2 ATSMO2
GO:0009873
ethylene-activated signaling pathway
BP1.289e-01ABI1 ATMYB72
GO:0009100
glycoprotein metabolic process
BP1.292e-01ATMAP4K I9H AT1G10730
GO:0042446
hormone biosynthetic process
BP1.292e-01FPS2 ATIPT9 ATSMO2
GO:0000096
sulfur amino acid metabolic process
BP1.313e-01AT5G65760 GSTL3 AT1G42960
GO:0010305
leaf vascular tissue pattern formation
BP1.330e-01499_
GO:0090329
regulation of DNA-dependent DNA replicat...
BP1.330e-01336_
GO:0070085
glycosylation
BP1.335e-01ATMAP4K I9H AT1G10730
GO:0010016
shoot system morphogenesis
BP1.341e-01GDPDL4 AT4G28650 AT2G27290 AtIDD5
GO:0010608
posttranscriptional regulation of gene e...
BP1.400e-01ACP ATMAP4K AtIDD5
GO:0009788
negative regulation of abscisic acid-act...
BP1.412e-01994_
GO:1901420
negative regulation of response to alcoh...
BP1.412e-01994_
GO:0009690
cytokinin metabolic process
BP1.493e-01152_
GO:0009828
plant-type cell wall loosening
BP1.493e-01563_
GO:0040034
regulation of development, heterochronic
BP1.493e-01286_
GO:0052541
plant-type cell wall cellulose metabolic...
BP1.493e-01085_
GO:0010628
positive regulation of gene expression
BP1.496e-01HAT3.1 ATMAP4K AT2G27290 AtIDD5
GO:0006164
purine nucleotide biosynthetic process
BP1.516e-01ATIPT9 AT4G11730
GO:0030036
actin cytoskeleton organization
BP1.516e-01GDPDL4 AT5G07740
GO:0042538
hyperosmotic salinity response
BP1.516e-01ABI1 ATHVA22C
GO:0000302
response to reactive oxygen species
BP1.532e-01ABI1 AT1G21140 ATMYB72
GO:0032268
regulation of cellular protein metabolic...
BP1.532e-01ATMAP4K APC10 AtIDD5
GO:0046488
phosphatidylinositol metabolic process
BP1.549e-01AT1G11880 AT2G27290
GO:0010557
positive regulation of macromolecule bio...
BP1.567e-01HAT3.1 ATMAP4K AT2G27290 AtIDD5