4.0:Analysis result:Information of module
WT Shoot Hypoxia

    Top 100 most enriched GO terms
GOID/TermOntologyp-valueGenes
GO:0007166
cell surface receptor signaling pathway
BP1.144e-03RLK FLS2 AT5G01890 IMK3 HAE GSO1 SRF6 GCR1 AT1G10850 AT2G01210
GO:0007167
enzyme linked receptor protein signaling...
BP1.407e-03RLK FLS2 AT5G01890 IMK3 HAE GSO1 SRF6 AT1G10850 AT2G01210
GO:0007169
transmembrane receptor protein tyrosine ...
BP1.407e-03RLK FLS2 AT5G01890 IMK3 HAE GSO1 SRF6 AT1G10850 AT2G01210
GO:0009690
cytokinin metabolic process
BP4.922e-03ATSOFL1 AT5G44350 ATCKX6 BRL1
GO:0042991
transcription factor import into nucleus
BP9.550e-03ATEIF3G2 APC8 AT3G12860 CRF5
GO:0009886
post-embryonic morphogenesis
BP1.132e-02AT5G28500 ATCAP-C ARF8 AT5G01890 ATCKX6 IMK3 HAE AT4G28080 ATLTL1 AIR12 LAX3 ATPIN1 ATPS1 AT1G64450 AT2G16020 AT2G01210
GO:0022412
cellular process involved in reproductio...
BP1.201e-02CER3 AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 EDA13
GO:0009560
embryo sac egg cell differentiation
BP1.388e-02AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 EDA13
GO:0006913
nucleocytoplasmic transport
BP1.480e-02AT5G54910 AT5G43960 ATEIF3G2 APC8 EMB2788 AT3G12860 AtRH36 AT2G46520 CRF5
GO:0051169
nuclear transport
BP1.480e-02AT5G54910 AT5G43960 ATEIF3G2 APC8 EMB2788 AT3G12860 AtRH36 AT2G46520 CRF5
GO:0000038
very long-chain fatty acid metabolic pro...
BP1.480e-02ATKCR1 CER3 KCS4 ADS1
GO:0009561
megagametogenesis
BP1.508e-02AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 AtRH36 EDA13
GO:0007292
female gamete generation
BP1.579e-02AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 EDA13
GO:0065009
regulation of molecular function
BP1.710e-02AT5G28500 AT5G28210 ARA12 AT5G59190 FLS2 AT4G38200 PLL4 EMB1270 GCR1 AT2G05920
GO:0007276
gamete generation
BP1.773e-02CER3 AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 EDA13
GO:0009736
cytokinin-activated signaling pathway
BP1.800e-02ARR6 AT5G58480 ATIRT1 AT1G70550
GO:0071368
cellular response to cytokinin stimulus
BP1.800e-02ARR6 AT5G58480 ATIRT1 AT1G70550
GO:0006468
protein phosphorylation
BP1.879e-02AT5G28210 RLK HOS15 FLS2 AT5G23170 CDKC;1 AtCTR1 AT5G03140 AT5G01890 IMK3 HAE GSO1 AT4G02630 BSK3 AT1G66460 AT3G14840 AT3G19100 MPK9 AT3G22750 AT3G08870 SRF6 HT1 ATCIPK18 AT1G10850 BRL1 AT2G01210 ATCRR2
GO:0010101
post-embryonic root morphogenesis
BP2.304e-02HAE AIR12 LAX3
GO:0010102
lateral root morphogenesis
BP2.304e-02HAE AIR12 LAX3
GO:0009735
response to cytokinin
BP2.345e-02ARR6 AT5G58480 ATIRT1 AT1G70550 GCR1
GO:0019953
sexual reproduction
BP2.403e-02CER3 AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 EXL6 EDA13
GO:0016310
phosphorylation
BP2.420e-02AT5G28210 RLK HOS15 FLS2 AT5G23170 CDKC;1 AtCTR1 AT5G03140 AT5G01890 IMK3 HAE GSO1 AT4G02630 BSK3 AT1G66460 AT3G14840 AT3G19100 MPK9 AT3G22750 AT3G08870 EMB3119 ATPIN1 SRF6 HT1 ATCIPK18 AT1G10850 BRL1 AT2G01210 ADK ATCRR2
GO:0006606
protein import into nucleus
BP3.020e-02AT5G54910 ATEIF3G2 APC8 AT3G12860 AtRH36 AT2G46520 CRF5
GO:0044744
protein targeting to nucleus
BP3.020e-02AT5G54910 ATEIF3G2 APC8 AT3G12860 AtRH36 AT2G46520 CRF5
GO:0051170
nuclear import
BP3.020e-02AT5G54910 ATEIF3G2 APC8 AT3G12860 AtRH36 AT2G46520 CRF5
GO:1902593
single-organism nuclear import
BP3.020e-02AT5G54910 ATEIF3G2 APC8 AT3G12860 AtRH36 AT2G46520 CRF5
GO:0035556
intracellular signal transduction
BP3.036e-02AT5G28210 ARR6 APRR4 AtCTR1 AT4G38200 ATPDI7 ATHSGBP ARFB1C EMB3119 AtRABG3d PS2 AT2G37800 AT2G02680
GO:1902531
regulation of intracellular signal trans...
BP3.235e-02AT5G28210 AtCTR1 AT4G38200
GO:0034504
protein localization to nucleus
BP3.297e-02AT5G54910 ATEIF3G2 APC8 AT3G12860 AtRH36 AT2G46520 CRF5
GO:0048569
post-embryonic organ development
BP3.579e-02ATCAP-C ARF8 AtCTR1 AT5G01890 IMK3 AT3G53040 HAE ATIRT1 AT3G28850 AIR12 LAX3 ATPIN1 ATPS1 AT1G64450 AT2G16020 AT2G01210 AT2G05920 ATHB-14
GO:0048447
sepal morphogenesis
BP4.012e-02IMK3 ATPS1 AT1G64450 AT2G01210
GO:0048451
petal formation
BP4.012e-02IMK3 ATPS1 AT1G64450 AT2G01210
GO:0048453
sepal formation
BP4.012e-02IMK3 ATPS1 AT1G64450 AT2G01210
GO:0009615
response to virus
BP4.157e-02ATCAP-C CDKC;1 AT4G32620 NHL2 ATPS1 AT1G24240
GO:0048442
sepal development
BP4.292e-02IMK3 ATPS1 AT1G64450 AT2G01210
GO:0048464
flower calyx development
BP4.292e-02IMK3 ATPS1 AT1G64450 AT2G01210
GO:0010411
xyloglucan metabolic process
BP4.348e-02AXY4 ATFT1
GO:0050790
regulation of catalytic activity
BP4.461e-02AT5G28500 AT5G28210 ARA12 AT5G59190 AT4G38200 EMB1270 GCR1 AT2G05920
GO:0009553
embryo sac development
BP4.938e-02AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 AtRH36 EDA13
GO:0034754
cellular hormone metabolic process
BP4.979e-02ATSOFL1 AT5G44350 ATCKX6 EMB3119 BRL1
GO:0048528
post-embryonic root development
BP4.979e-02AtCTR1 HAE ATIRT1 AIR12 LAX3
GO:0071804
cellular potassium ion transport
BP5.045e-02AT5G14880 ATCAX11
GO:0071805
potassium ion transmembrane transport
BP5.045e-02AT5G14880 ATCAX11
GO:0009733
response to auxin
BP5.401e-02ARF8 ARGOS AT3G53250 ATIRT1 AIR12 LAX3 ATPIN1 AtMYB93 AT2G37030 AT2G28085
GO:0072594
establishment of protein localization to...
BP5.629e-02SVR7 AT5G54910 AT5G38890 ATEIF3G2 AT3G49890 APC8 AT4G30600 AT3G12860 AT1G18850 AtRH36 MPI7 AT2G17670 AT2G46520 CRF5
GO:0051704
multi-organism process
BP5.669e-02AT5G14940 GTE7 ATCNX1 CER3 AT5G51280 ATCAP-C FLS2 GTE2 CDKC;1 AT5G01890 AT3G63380 AT3G49890 APC8 AT4G32620 AT4G31860 HAE EMB2788 ATIRT1 ESM1 AT3G12860 AT3G26870 NHL2 EMB3119 ATPIN1 ATPS1 AT1G51410 AT1G19320 ADS1 EXL6 MPI7 HRD AT1G24240 AT2G46520 EDA13
GO:0007264
small GTPase mediated signal transductio...
BP5.850e-02AT4G38200 ATHSGBP ARFB1C AtRABG3d
GO:0051607
defense response to virus
BP6.039e-02ATCAP-C AT4G32620 NHL2 ATPS1 AT1G24240
GO:0006665
sphingolipid metabolic process
BP6.047e-02ATKCR1 PUT3 ATCES1
GO:0042335
cuticle development
BP6.047e-02ATKCR1 CER3 KCS4
GO:0044764
multi-organism cellular process
BP6.047e-02GTE7 GTE2 MPI7
GO:0010103
stomatal complex morphogenesis
BP6.093e-02AT5G28500 AT5G01890 ATCKX6 HAE AT4G28080 ATLTL1
GO:0034220
ion transmembrane transport
BP6.134e-02AT5G14880 FLS2 AT3G63380 ATIRT1 PLL4 AT1G77610 ATCAX11
GO:0007165
signal transduction
BP6.158e-02AT5G28210 RLK ARR6 AT5G58480 APRR4 FLS2 AtCTR1 AT5G01890 AT3G63380 IMK3 AT4G38200 HAE ATPDI7 GSO1 ATIRT1 ATHSGBP BSK3 AtRLP39 MPK9 ARFB1C EMB3119 AtRABG3d SRF6 AT1G70550 ATCIPK18 GCR1 AT1G10850 PS2 AT2G01210 AT2G37800 AT2G02680 ATHB-14
GO:0006796
phosphate-containing compound metabolic ...
BP6.309e-02AT5G19920 AT5G28210 RLK HOS15 FLS2 AT5G43960 AT5G23170 CDKC;1 AT5G08180 ATEIF2-A2 AtCTR1 AT5G03140 AT5G02760 AT5G01890 AT3G63380 IMK3 AT4G38520 AT4G31860 HAE AT4G28080 GSO1 AT4G02630 BSK3 AT4G10280 AT1G66460 AT3G14840 UGD2 ESM1 AT3G19100 AT1G71850 MPK9 AT3G22750 AT3G01380 AT3G08870 EMB3119 ATPIN1 SRF6 HT1 ATCIPK18 GCR1 AT1G10850 EIF2 BRL1 HMG2 AT2G01210 ADK ATCRR2"
GO:0006643
membrane lipid metabolic process
BP6.322e-02ATKCR1 PUT3 AT4G31860 ATCES1 AT3G01380
GO:0023052
signaling
BP6.443e-02AT5G28210 RLK ARR6 AT5G58480 APRR4 FLS2 AtCTR1 AT5G01890 AT3G63380 IMK3 AT4G38200 HAE ATPDI7 GSO1 ATIRT1 ATHSGBP BSK3 AtRLP39 MPK9 ARFB1C EMB3119 AtRABG3d ATPS1 SRF6 AT1G70550 ATCIPK18 GCR1 AT1G10850 PS2 AT2G01210 AT2G37800 AT2G02680 ATHB-14
GO:0044700
single organism signaling
BP6.443e-02AT5G28210 RLK ARR6 AT5G58480 APRR4 FLS2 AtCTR1 AT5G01890 AT3G63380 IMK3 AT4G38200 HAE ATPDI7 GSO1 ATIRT1 ATHSGBP BSK3 AtRLP39 MPK9 ARFB1C EMB3119 AtRABG3d ATPS1 SRF6 AT1G70550 ATCIPK18 GCR1 AT1G10850 PS2 AT2G01210 AT2G37800 AT2G02680 ATHB-14
GO:0048438
floral whorl development
BP6.452e-02ATMYA2 ARF8 AT5G01890 IMK3 HAE AT3G28850 ATPIN1 ATPS1 AT1G64450 AT2G16020 AT2G01210 AT2G05920 ATHB-14
GO:0033365
protein localization to organelle
BP6.523e-02SVR7 AT5G54910 AT5G38890 ATEIF3G2 AT3G49890 APC8 AT4G30600 AT3G12860 AT1G18850 AtRH36 MPI7 AT2G17670 AT2G46520 CRF5
GO:0046519
sphingoid metabolic process
BP6.546e-02ATKCR1 PUT3
GO:0046520
sphingoid biosynthetic process
BP6.546e-02ATKCR1 PUT3
GO:0006626
protein targeting to mitochondrion
BP6.547e-02AT5G38890 AT3G49890 AT1G18850 AT2G17670
GO:0048446
petal morphogenesis
BP6.547e-02IMK3 ATPS1 AT1G64450 AT2G01210
GO:0070585
protein localization to mitochondrion
BP6.547e-02AT5G38890 AT3G49890 AT1G18850 AT2G17670
GO:0072655
establishment of protein localization to...
BP6.547e-02AT5G38890 AT3G49890 AT1G18850 AT2G17670
GO:0002252
immune effector process
BP6.585e-02ATCAP-C AT3G63380 AT4G32620 NHL2 ATPS1 AT1G24240
GO:0000003
reproduction
BP6.682e-02CHR42 ARA12 CER3 AT5G51280 ATCAP-C AT5G12260 AT3G49890 APC8 EMB2788 AT3G12860 GCR1 EXL6 ATGSL03 EDA13 ATHB-14
GO:0048609
multicellular organismal reproductive pr...
BP6.685e-02ARA12 CER3 AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 GCR1 EDA13 ATHB-14
GO:0016556
mRNA modification
BP6.911e-02AT5G28500 RARE1 AT4G28080 OTP87
GO:0006793
phosphorus metabolic process
BP7.010e-02AT5G19920 AT5G28210 RLK HOS15 FLS2 AT5G43960 AT5G23170 CDKC;1 AT5G08180 ATEIF2-A2 AtCTR1 AT5G03140 AT5G02760 AT5G01890 AT3G63380 IMK3 AT4G38520 AT4G31860 HAE AT4G28080 GSO1 AT4G02630 BSK3 AT4G10280 AT1G66460 AT3G14840 UGD2 ESM1 AT3G19100 AT1G71850 MPK9 AT3G22750 AT3G01380 AT3G08870 EMB3119 LAX3 ATPIN1 SRF6 HT1 ATCIPK18 GCR1 AT1G10850 EIF2 BRL1 HMG2 AT2G01210 ADK ATCRR2
GO:1902580
single-organism cellular localization
BP7.048e-02SVR7 AT5G54910 FLS2 AT5G41400 AT5G38890 ATEIF3G2 AT3G49890 APC8 AT4G30600 AT3G12860 EMB3119 AT1G18850 AtRH36 MPI7 AT1G61740 AT2G17670 AT2G46520 CRF5
GO:0043086
negative regulation of catalytic activit...
BP8.064e-02AT5G28210 ARA12 AT5G59190 AT2G05920
GO:0009691
cytokinin biosynthetic process
BP8.175e-02AT5G44350 BRL1
GO:0010359
regulation of anion channel activity
BP8.175e-02FLS2 PLL4
GO:1902532
negative regulation of intracellular sig...
BP8.175e-02AT5G28210 AtCTR1
GO:1903959
regulation of anion transmembrane transp...
BP8.175e-02FLS2 PLL4
GO:0048645
organ formation
BP8.234e-02ATCAP-C IMK3 LAX3 ATPIN1 ATPS1 AT1G64450 AT2G01210
GO:0010267
production of ta-siRNAs involved in RNA ...
BP8.468e-02ATCAP-C AT4G32620 ATPS1 AT1G24240
GO:0009987
cellular process
BP8.482e-02AT2G47540 ATKCR1 SVR7 ATSOFL1 AtTRS120 AT5G28740 AT5G28500 AT5G19800 CHR42 AT5G19920 AtGGPPS11 AT3G43610 AT5G14880 AT5G28210 AT5G25520 RLK ARA12 HOS15 GTE7 ATOPT4 ARR6 ATCNX1 AT5G59500 AT5G58680 AT5G58480 CER3 SCL8 AT5G51910 AT5G51280 ATMYB111 APRR4 ATCAP-C ERF1-1 FLS2 AT5G44350 AT5G43960 ATMYA2 AT5G41400 AT5G40140 AT5G38890 ARF8 AT5G23170 ECR1 AT5G17380 RARE1 AT5G12260 AT5G11430 TINY2 GTE2 CDKC;1 AT5G08180 AtGUS2 ATEIF3G2 ATEIF2-A2 PUT3 AtCTR1 AT5G03140 AT5G02760 ALG10 AT5G01890 AT3G63380 ATCKX6 GATA4 AT3G60580 ARGOS AT3G59950 IMK3 FMT AT3G51950 AT3G49890 APC8 AT4G38520 AT4G38200 CGL NAGS2 AT4G32620 AT4G31860 AAT3 AT4G30600 HAE AT4G28080 ATPDI7 EMB2788 ATCES1 GSO1 ATIRT1 ATHSGBP AT4G13210 AtMYB42 AT4G12240 BSM AT4G02630 BSK3 AT4G10280 AT2G33260 AT1G66460 AT3G14840 AT3G28850 UGD2 ESM1 AT3G19100 PLL4 AT1G71850 AT1G55360 AT3G01620 AtRLP39 AT3G12860 AtFaTA BRG3 RFC3 ADOF2 MPK9 EMB1270 AT3G15680 AT3G26870 AT3G22750 MAT4 ARFB1C AT3G01380 AT3G08870 AIR12 AT3G04980 EMB3119 AtRABG3d LAX3 AT1G77610 ATPIN1 ATPS1 SRF6 NRPA2 AtMYB113 OTP87 AT1G70550 AT1G73970 AT1G51410 MOM HT1 KCS4 ATCIPK18 ADS1 AT1G04880 AT1G18850 GCR1 AtMYB93 EXL6 AtRH36 AT1G10850 AT1G75620 AT2G17630 AT2G22100 PS2 MPI7 ATORC6 HRD ATPRP2 EIF2 AT1G61740 BRL1 AT2G17670 ATCAX11 ATSUC4 AXY4 HMG2 AT1G24240 AST91 AT1G05020 AT2G46520 ATGSL03 AT2G01210 XEG113 ATOFP7 ADK AT2G05920 AT2G37800 AtTic20-II EDA13 CRF5 AT2G35540 ATFT1 EMB2001 AT2G26920 ATCRR2 AT2G02680 ATHB-14 AT2G19150
GO:0022898
regulation of transmembrane transporter ...
BP9.031e-02FLS2 PLL4
GO:0032409
regulation of transporter activity
BP9.031e-02FLS2 PLL4
GO:0032412
regulation of ion transmembrane transpor...
BP9.031e-02FLS2 PLL4
GO:0034762
regulation of transmembrane transport
BP9.031e-02FLS2 PLL4
GO:0034765
regulation of ion transmembrane transpor...
BP9.031e-02FLS2 PLL4
GO:0098656
anion transmembrane transport
BP9.112e-02FLS2 PLL4 AT1G77610
GO:0044092
negative regulation of molecular functio...
BP9.306e-02AT5G28210 ARA12 AT5G59190 AT2G05920
GO:0032504
multicellular organism reproduction
BP9.370e-02ARA12 CER3 AT5G51280 AT3G49890 APC8 EMB2788 AT3G12860 GCR1 EDA13 ATHB-14
GO:0048437
floral organ development
BP9.409e-02ATCAP-C ARF8 AT5G01890 IMK3 AT3G53040 HAE AT3G28850 ATPIN1 ATPS1 AT1G64450 AT2G16020 AT2G01210 AT2G05920 ATHB-14
GO:0046467
membrane lipid biosynthetic process
BP9.739e-02ATKCR1 PUT3 AT4G31860 AT3G01380
GO:0016482
cytoplasmic transport
BP9.806e-02SVR7 AT5G54910 AT5G43960 AT5G38890 ATEIF3G2 AT3G49890 APC8 AT4G30600 EMB2788 AT3G12860 AT1G18850 AtRH36 MPI7 AT2G17670 AT2G46520 CRF5
GO:0071281
cellular response to iron ion
BP9.912e-02AtCTR1 ATIRT1
GO:0048527
lateral root development
BP1.018e-01HAE ATIRT1 AIR12 LAX3
GO:0006605
protein targeting
BP1.074e-01SVR7 AT5G54910 AT5G41400 AT5G38890 ATEIF3G2 AT3G49890 APC8 AT4G30600 AT3G12860 EMB3119 AT1G18850 AtRH36 MPI7 AT1G61740 AT2G17670 AT2G46520 CRF5
GO:0052386
cell wall thickening
BP1.082e-01FLS2 ATGSL03
GO:0052543
callose deposition in cell wall
BP1.082e-01FLS2 ATGSL03
GO:0017038
protein import
BP1.110e-01AT5G54910 ATEIF3G2 APC8 AT3G12860 AtRH36 MPI7 AT2G46520 CRF5
GO:0007005
mitochondrion organization
BP1.156e-01AT5G38890 AT3G49890 AT1G18850 AT2G17670
GO:0009625
response to insect
BP1.174e-01ESM1 ADS1