GOID TERM ONTOLOGY pValue Genes GO:0019344 cysteine biosynthetic process BP 3.66605727157671e-05 CP22//ASN2//GSA1//ATSAHH2//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320 GO:0006534 cysteine metabolic process BP 4.24452156727133e-05 CP22//ASN2//GSA1//ATSAHH2//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320 GO:0009070 serine family amino acid biosynthetic pr... BP 5.26126495745885e-05 CP22//ASN2//GSA1//ATSAHH2//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320 GO:0009069 serine family amino acid metabolic proce... BP 8.07329252058918e-05 CP22//ASN2//GSA1//ATSAHH2//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320//ATHPT GO:0000097 sulfur amino acid biosynthetic process BP 9.6908660047249e-05 CP22//ASN2//GSA1//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320 GO:0000096 sulfur amino acid metabolic process BP 9.83844184295221e-05 CP22//ASN2//GSA1//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320//ATHPT GO:0009765 photosynthesis, light harvesting BP 0.000474746576962308 LHCB4.1//LHCA1//CP24//PSAO//LHCA3 GO:0019684 photosynthesis, light reaction BP 0.000490337682239803 CP22//AT5G59250//LHCB4.1//LHCA1//AT3G47650//ATTOC75-IV//AtTic62//PSBTN//CP24//GAPB//PSAH-2//PSAO//PETE1//ATGLK1//LHCA3 GO:0042538 hyperosmotic salinity response BP 0.00106126274484688 PROPEP2//ASN2//LTP4//COR78//ATHVA22D//AtCLO3//COR413-TM1 GO:0009269 response to desiccation BP 0.00115374434669184 COR78//ATHVA22D//AtCLO3//COR413-TM1 GO:0015979 photosynthesis BP 0.00166435910704147 CP22//AT5G59250//LHCB4.1//LHCA1//AT3G47650//AT3G47070//ATTOC75-IV//AtTic62//PSBTN//CP24//GAPB//PSAH-2//PSAO//PETE1//ATGLK1//LHCA3 GO:0044272 sulfur compound biosynthetic process BP 0.00184917885068538 CP22//ASN2//GSA1//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//NRT1.7//PSAO//PETE1//LHCA3//AT2G42320//ATHPT GO:0006790 sulfur compound metabolic process BP 0.00241892358142457 CP22//ASN2//GSA1//APS2//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//NRT1.7//PSAO//PETE1//ATGSTU17//LHCA3//AT2G42320//ATHPT GO:0008652 cellular amino acid biosynthetic process BP 0.00268094687906417 CP22//AT5G66120//ASN2//GSA1//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320//ATHPT GO:0043161 proteasome-mediated ubiquitin-dependent ... BP 0.0028126757434411 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0042254 ribosome biogenesis BP 0.00336601241837448 CP22//LHCB4.1//LHCA1//AT3G47650//AT3G47070//PSBTN//ATPRX//GAPB//PSAH-2//PSAO//ATGLK1//AT1G24240 GO:0051510 regulation of unidimensional cell growth BP 0.00347586778603256 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0006364 rRNA processing BP 0.00350208074888249 CP22//LHCB4.1//LHCA1//AT3G47650//AT3G47070//PSBTN//ATPRX//GAPB//PSAH-2//PSAO//ATGLK1 GO:1901607 alpha-amino acid biosynthetic process BP 0.00362448744098259 CP22//ASN2//GSA1//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320 GO:0022613 ribonucleoprotein complex biogenesis BP 0.00364611605582126 CP22//LHCB4.1//LHCA1//AT3G47650//AT3G47070//PSBTN//ATPRX//GAPB//PSAH-2//PSAO//ATGLK1//AT1G24240 GO:0016072 rRNA metabolic process BP 0.0036562103825378 CP22//LHCB4.1//LHCA1//AT3G47650//AT3G47070//PSBTN//ATPRX//GAPB//PSAH-2//PSAO//ATGLK1 GO:0001558 regulation of cell growth BP 0.00467122945191472 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0022604 regulation of cell morphogenesis BP 0.00467122945191472 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0032875 regulation of DNA endoreduplication BP 0.00500839371852353 CCS52B//CCS52A1//AT1G06590 GO:0042023 DNA endoreduplication BP 0.00512752087200321 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0044786 cell cycle DNA replication BP 0.00512752087200321 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0051302 regulation of cell division BP 0.00541224721946099 CCS52B//CCS52A1//BUB3.1//AT1G06590 GO:0031407 oxylipin metabolic process BP 0.00605634430596001 AtCLO3//GAPB//ATHPT GO:0090329 regulation of DNA-dependent DNA replicat... BP 0.00605634430596001 CCS52B//CCS52A1//AT1G06590 GO:0044283 small molecule biosynthetic process BP 0.00994138983109097 CP22//AT5G66120//ASN2//AT5G63700//GSA1//AT5G55450//AT2353//PHS1//SQE3//FAD4//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//ADS1//PSAO//PETE1//AFR//atnudt5//LHCA3//AT2G42320//ATHPT//ACPT//ATCB5-B GO:0034470 ncRNA processing BP 0.0103190567750734 CP22//LHCB4.1//LHCA1//AT3G47650//AT3G47070//PSBTN//ATPRX//GAPB//PSAH-2//PSAO//ATGLK1 GO:0050789 regulation of biological process BP 0.01111603146212 YAB5//AT2G39850//CP22//AT4G15680//ESE3//AtMAN7//PROPEP2//GSA1//ATPLC4//AT5G55450//ATIM//ATWRKY8//AT5G45560//AT5G44580//ATERF-9//ATICMTA//AT5G18090//CCS52B//AtRABH1e//LHCB4.1//LHCA1//ARAC6//ANAC073//AT4G27700//AtWRKY20//ATHVA22D//CCS52A1//ORP2A//AT4G02800//AT1G25390//AT1G66830//AT1G31540//AGL79//PSBTN//BUB3.1//CP24//GAPB//PSAH-2//AT1G69420//AT1G70550//AT1G06830//AT1G05950//ATRAB-A2B//AT1G19970//PSAO//CYCA2;3//PETE1//AT1G50270//AT1G06590//ATPUB18//ATGLK1//AFR//atnudt5//AT1G78995//ATGSTU17//AT1G24240//AtERF53//AT2G27285//ATHB-17//NGA1//ATHPT//AT2G34930//ArRABA1h//ATUTR1//AT2G30540//ZFN2 GO:0010207 photosystem II assembly BP 0.0128278790782259 CP22//AT3G47650//ATTOC75-IV//PSBTN//GAPB//PSAH-2//PSAO//ATGLK1 GO:0070838 divalent metal ion transport BP 0.012975388855675 AT5G27290//AT3G47070//ATSAHH2//CP24//PSAO//PETE1//AT2G16510 GO:0072511 divalent inorganic cation transport BP 0.012975388855675 AT5G27290//AT3G47070//ATSAHH2//CP24//PSAO//PETE1//AT2G16510 GO:0006520 cellular amino acid metabolic process BP 0.0134413809064819 CP22//AT5G66120//ASN2//GSA1//ATSAHH2//ATHMT-1//ATPRX//EMB2768//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//ATBCAT-1//LHCA3//AT2G42320//ATHPT GO:0006972 hyperosmotic response BP 0.0136192964803197 PROPEP2//ASN2//LTP4//COR78//ATHVA22D//AtCLO3//COR413-TM1 GO:1901605 alpha-amino acid metabolic process BP 0.0147283186526019 CP22//ASN2//GSA1//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//LHCA3//AT2G42320//ATHPT GO:0022603 regulation of anatomical structure morph... BP 0.0152011266466541 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0046351 disaccharide biosynthetic process BP 0.0169374797900929 AtBAM3//TPPJ//AT1G66430 GO:0006091 generation of precursor metabolites and ... BP 0.0169387519658017 CP22//AT5G59250//LHCB4.1//LHCA1//AT3G47650//ATTOC75-IV//AtTic62//PSBTN//CP24//GAPB//PSAH-2//AT1G66430//PSAO//PETE1//ATGLK1//LHCA3 GO:0009744 response to sucrose BP 0.0171862812780698 UGT78D2//LHCB4.1//LHCA1//SQE3//GAPB//AFR//ATOEP16-1 GO:0080167 response to karrikin BP 0.0172870386899076 CP22//UGT78D2//AT2353//FAD4//ATGSTU17 GO:0032268 regulation of cellular protein metabolic... BP 0.0183658281808588 YAB5//PSBTN//BUB3.1//CP24//PSAH-2//PSAO//CYCA2;3//PETE1//ATGLK1 GO:0034285 response to disaccharide BP 0.0187825893423751 UGT78D2//LHCB4.1//LHCA1//SQE3//GAPB//AFR//ATOEP16-1 GO:0051246 regulation of protein metabolic process BP 0.0203867477082392 YAB5//PSBTN//BUB3.1//CP24//PSAH-2//PSAO//CYCA2;3//PETE1//ATGLK1 GO:0007276 gamete generation BP 0.0207581397532099 CCS52B//CCS52A1//AT1G12830//AT1G06590//AT2G20710 GO:0065007 biological regulation BP 0.0210439460986352 YAB5//AT2G39850//CP22//AT4G15680//AT5G27290//ESE3//AtMAN7//PROPEP2//GSA1//ATPLC4//AT5G55450//ATIM//ATWRKY8//AT5G45560//AT5G44580//ATERF-9//ATICMTA//AT5G18090//CCS52B//AtRABH1e//LHCB4.1//LHCA1//AT3G47070//ARAC6//ANAC073//AT4G27700//AtWRKY20//ATHVA22D//CCS52A1//ORP2A//AT4G02800//AT1G25390//GDPDL1//AT1G66830//AT1G31540//AGL79//PSBTN//BUB3.1//CP24//GAPB//PSAH-2//AT1G69420//AT1G70550//AT1G06830//AT1G05950//ATRAB-A2B//AT1G19970//PSAO//CYCA2;3//PETE1//AT1G50270//AT1G06590//ATPUB18//ATGLK1//AFR//atnudt5//AT1G78995//ATGSTU17//AT1G24240//AtERF53//AT2G27285//ATHB-17//NGA1//ATHPT//AT2G34930//ArRABA1h//ATUTR1//AT2G30540//ZFN2 GO:0019953 sexual reproduction BP 0.0218943327840352 AT5G38760//CCS52B//CCS52A1//AT1G12830//AT1G06590//AT2G20710 GO:0043248 proteasome assembly BP 0.0220091702928962 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0051788 response to misfolded protein BP 0.0220091702928962 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0009773 photosynthetic electron transport in pho... BP 0.0222877376443416 AT3G47650//GAPB//PSAH-2//PETE1 GO:0043623 cellular protein complex assembly BP 0.0227880367290419 CP22//CCS52B//AT3G47650//CCS52A1//ATTOC75-IV//PSBTN//BUB3.1//GAPB//PSAH-2//AT1G69420//PSAO//CYCA2;3//AT1G06590//ATGLK1 GO:0035304 regulation of protein dephosphorylation BP 0.0229703063021792 PSBTN//CP24//PSAH-2//PSAO//PETE1//ATGLK1 GO:0016053 organic acid biosynthetic process BP 0.0237109948732645 CP22//AT5G66120//ASN2//GSA1//AT5G55450//AT2353//FAD4//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//ADS1//PSAO//PETE1//atnudt5//LHCA3//AT2G42320//ATHPT GO:0046394 carboxylic acid biosynthetic process BP 0.0237109948732645 CP22//AT5G66120//ASN2//GSA1//AT5G55450//AT2353//FAD4//ATSAHH2//ATHMT-1//ATPRX//CP24//GAPB//PSAH-2//AT1G66430//ADS1//PSAO//PETE1//atnudt5//LHCA3//AT2G42320//ATHPT GO:0035303 regulation of dephosphorylation BP 0.0240813371058068 PSBTN//CP24//PSAH-2//PSAO//PETE1//ATGLK1 GO:0048609 multicellular organismal reproductive pr... BP 0.0241916475541329 ESE3//AT5G45850//CCS52B//CCS52A1//AT1G12830//AT1G06590//AT2G20710 GO:0034660 ncRNA metabolic process BP 0.0243997046280688 CP22//LHCB4.1//LHCA1//AT3G47650//AT3G47070//PSBTN//ATPRX//EMB2768//GAPB//PSAH-2//PSAO//ATGLK1 GO:0010498 proteasomal protein catabolic process BP 0.0246559603013364 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0010564 regulation of cell cycle process BP 0.0260528539123124 CCS52B//CCS52A1//BUB3.1//CYCA2;3//AT1G06590 GO:0009312 oligosaccharide biosynthetic process BP 0.0260887798515219 AtBAM3//TPPJ//AT1G66430 GO:0044699 single-organism process BP 0.0281180262210845 YAB5//CP22//AtBAM3//AT4G15680//AtPRD1//AT5G17530//UGT78D2//AT5G27290//ESE3//AtMAN7//AT5G66120//PROPEP2//ASN2//TPPJ//AT5G63700//GSA1//AT5G60150//AT5G59250//LTP4//ATPLC4//AT5G55450//COR78//AT2353//AT5G45850//AT5G45560//ATERF-9//AT5G38760//ATICMTA//CCS52B//AtRABH1e//LHCB4.1//LHCA1//PIP2;5//AT3G53100//AT3G47650//PHS1//AT3G47070//APL3//SQE3//ARAC6//AT4G33550//ANAC073//AT4G27700//FAD4//AtWRKY20//ATHVA22D//CCS52A1//ORP2A//AT4G20760//ATTOC75-IV//AT4G02800//ATMLO1//AT1G25390//APS2//AtCLO3//GDPDL1//AT1G66830//AT1G31540//AtTic62//AGL79//BUB3.1//ATSAHH2//AT2G41050//ATHMT-1//ATPRX//EMB2768//CYP86A4//CP24//GAPB//COR413-TM1//PSAH-2//AT1G53690//AT1G66430//AT1G69420//AT1G70550//NRT1.7//ATINT1//AT1G06830//AT1G05950//ADS1//ATRAB-A2B//AT1G12830//AT1G19970//APL2//PSAO//CYCA2;3//PETE1//emb1129//AT1G50270//AT1G06590//AT1G11730//AT1G05700//ATPUB18//AT2G16510//ATCHX21//AtTic55//RNS3//ATGLK1//AFR//atnudt5//AT1G78995//ATGSTU17//ATBCAT-1//AT1G09600//SD1-29//ATMLO8//AT1G24240//LHCA3//AT2G20710//AT2G27285//RPI2//AT2G42320//AKR4C10//AT2G02400//ATOEP16-1//ATLTP1//AT2G47780//MEE29//NGA1//AT2G47050//ATHPT//PLA//ACPT//AT2G34930//ArRABA1h//ATUTR1//AT2G30540//ATCB5-B GO:0007264 small GTPase mediated signal transductio... BP 0.0294487499210607 AtRABH1e//ARAC6//ATRAB-A2B//ArRABA1h GO:0048638 regulation of developmental growth BP 0.0317551347923919 AtMAN7//CCS52B//CCS52A1//BUB3.1//AT1G69420//CYCA2;3//AT1G06590 GO:0019725 cellular homeostasis BP 0.0318318466373919 AT4G15680//AT5G27290//AT3G47070//GDPDL1//AT1G06830//PSAO//PETE1//AT2G30540 GO:0032504 multicellular organism reproduction BP 0.0341777057657124 ESE3//AT5G45850//CCS52B//CCS52A1//AT1G12830//AT1G06590//AT2G20710 GO:0031329 regulation of cellular catabolic process BP 0.0375795430350972 ATHVA22D//BUB3.1 GO:0019220 regulation of phosphate metabolic proces... BP 0.0393853014459417 PSBTN//CP24//PSAH-2//PSAO//CYCA2;3//PETE1//ATGLK1 GO:0031399 regulation of protein modification proce... BP 0.0393853014459417 PSBTN//CP24//PSAH-2//PSAO//CYCA2;3//PETE1//ATGLK1 GO:0051174 regulation of phosphorus metabolic proce... BP 0.0393853014459417 PSBTN//CP24//PSAH-2//PSAO//CYCA2;3//PETE1//ATGLK1 GO:0006869 lipid transport BP 0.0401137690772766 LTP4//AT5G55450//AT4G33550//ATLTP1 GO:0019742 pentacyclic triterpenoid metabolic proce... BP 0.0431631102175441 SQE3//ATCB5-B GO:0019745 pentacyclic triterpenoid biosynthetic pr... BP 0.0431631102175441 SQE3//ATCB5-B GO:0034622 cellular macromolecular complex assembly BP 0.0436137600886143 CP22//CCS52B//AT3G47650//CCS52A1//ATTOC75-IV//PSBTN//BUB3.1//GAPB//PSAH-2//AT1G69420//PSAO//CYCA2;3//AT1G06590//ATGLK1 GO:0040008 regulation of growth BP 0.0465925144444412 AtMAN7//CCS52B//CCS52A1//BUB3.1//AT1G69420//CYCA2;3//AT1G06590 GO:0006722 triterpenoid metabolic process BP 0.0490330666020088 SQE3//ATCB5-B GO:0016104 triterpenoid biosynthetic process BP 0.0490330666020088 SQE3//ATCB5-B GO:0031408 oxylipin biosynthetic process BP 0.0490330666020088 GAPB//ATHPT GO:0044703 multi-organism reproductive process BP 0.0501134690489175 AT5G38760//CCS52B//CCS52A1//AT1G53690//AT1G12830//AT1G06590//ATCHX21//SD1-29//AT2G20710//ArRABA1h GO:0009644 response to high light intensity BP 0.0504884137018634 LHCB4.1//LHCA1//PHS1//GAPB//ATRAB-A2B//ATUTR1 GO:0006873 cellular ion homeostasis BP 0.057700277720289 AT5G27290//AT3G47070//GDPDL1//PSAO//PETE1 GO:0044257 cellular protein catabolic process BP 0.0580292643091616 CCS52B//CCS52A1//VFB3//BUB3.1//GAPB//CYCA2;3//AT1G06590//FTSH8 GO:0043933 macromolecular complex subunit organizat... BP 0.0582638132430877 YAB5//CP22//AT5G63700//AT5G45560//CCS52B//AT3G47650//ARAC6//CCS52A1//ATTOC75-IV//AT4G02800//PSBTN//BUB3.1//AT2G41050//GAPB//PSAH-2//AT1G69420//AT1G05950//PSAO//CYCA2;3//AT1G06590//ATGLK1 GO:0009767 photosynthetic electron transport chain BP 0.0582787457286541 AT3G47650//GAPB//PSAH-2//PETE1 GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 0.058300741903212 AT5G63700//SQE3//AFR GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 0.058300741903212 AT5G63700//SQE3//AFR GO:0055082 cellular chemical homeostasis BP 0.0600393164685204 AT5G27290//AT3G47070//GDPDL1//PSAO//PETE1 GO:0009894 regulation of catabolic process BP 0.0615655266523211 ATHVA22D//BUB3.1 GO:0032958 inositol phosphate biosynthetic process BP 0.0622209744382423 AT5G63700//SQE3//AFR GO:0006461 protein complex assembly BP 0.0668397242017335 CP22//CCS52B//AT3G47650//CCS52A1//ATTOC75-IV//PSBTN//BUB3.1//GAPB//PSAH-2//AT1G69420//PSAO//CYCA2;3//AT1G06590//ATGLK1 GO:0010218 response to far red light BP 0.067205452344873 LHCB4.1//LHCA1//AT3G47070//GAPB GO:0009414 response to water deprivation BP 0.0679602138153041 PROPEP2//LTP4//COR78//ATHVA22D//AtCLO3//COR413-TM1//ATGSTU17//AtERF53 GO:0070271 protein complex biogenesis BP 0.0680071532690553 CP22//CCS52B//AT3G47650//CCS52A1//ATTOC75-IV//PSBTN//BUB3.1//GAPB//PSAH-2//AT1G69420//PSAO//CYCA2;3//AT1G06590//ATGLK1 GO:0045786 negative regulation of cell cycle BP 0.0681962870998398 BUB3.1//CYCA2;3 GO:0071822 protein complex subunit organization BP 0.0690197548045562 CP22//CCS52B//AT3G47650//ARAC6//CCS52A1//ATTOC75-IV//PSBTN//BUB3.1//GAPB//PSAH-2//AT1G69420//PSAO//CYCA2;3//AT1G06590//ATGLK1 GO:0010114 response to red light BP 0.0703301021226855 LHCB4.1//LHCA1//AT3G47070//GAPB GO:0044085 cellular component biogenesis BP 0.0704280602780362 CP22//AtPRD1//CCS52B//LHCB4.1//LHCA1//AT3G47650//AT3G47070//ANAC073//CCS52A1//ATTOC75-IV//PSBTN//BUB3.1//ATPRX//EMB2768//GAPB//PSAH-2//AT1G69420//AT1G70550//PSAO//CYCA2;3//AT1G06590//ATGLK1//AtXTH32//AT1G24240 GO:0000003 reproduction BP 0.0704901939691327 AtPRD1//ESE3//AT5G45850//AT5G38760//CCS52B//CCS52A1//AT1G12830//AT1G50270//AT1G06590//AT2G20710 GO:0030163 protein catabolic process BP 0.0714901023903188 CCS52B//CCS52A1//VFB3//BUB3.1//GAPB//CYCA2;3//AT1G06590//FTSH8