GOID TERM ONTOLOGY pValue Genes GO:0009853 photorespiration BP 5.40347769546954e-10 FRO1//ADK1//AT5G11770//CI51//VPS35C//emb2474//AT3G46430//AtCIB22//AT4G32470//AT4G29480//AT4G00585//PBB1//PAE2//AT3G10860//SDH6//SDH5//AT1G05205//RPS14//AT2G02510//ATP3 GO:0043094 cellular metabolic compound salvage BP 2.94929686511185e-09 FRO1//ADK1//AT5G11770//CI51//VPS35C//emb2474//AT3G46430//AtCIB22//AT4G32470//AT4G29480//AT4G00585//PBB1//PAE2//AT3G10860//SDH6//SDH5//AT1G05205//RPS14//AT2G02510//ATP3 GO:0080129 proteasome core complex assembly BP 3.21917099063646e-06 FRO1//ADK1//AT5G11770//CI51//VPS35C//AtCIB22//AT4G32470//AT4G29480//AT4G00585//PBB1//AtPNC1//SDH5//AT2G02510//ATP3 GO:0006511 ubiquitin-dependent protein catabolic pr... BP 5.44340492150031e-06 FRO1//ADK1//AT5G37890//AT5G11770//CI51//UPL4//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//PAE2//AtUBP13//AtPNC1//SDH5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0019941 modification-dependent protein catabolic... BP 6.56092339202701e-06 FRO1//ADK1//AT5G37890//AT5G11770//CI51//UPL4//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//PAE2//AtUBP13//AtPNC1//SDH5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0043632 modification-dependent macromolecule cat... BP 6.56092339202701e-06 FRO1//ADK1//AT5G37890//AT5G11770//CI51//UPL4//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//PAE2//AtUBP13//AtPNC1//SDH5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0043248 proteasome assembly BP 1.63620541294943e-05 FRO1//ADK1//AT5G11770//CI51//ASK13//VPS35C//AtCIB22//AT4G32470//AT4G29480//AT4G00585//PBB1//AtPNC1//SDH5//AT2G03430//AT2G02510//ATP3 GO:0051788 response to misfolded protein BP 1.63620541294943e-05 FRO1//ADK1//AT5G11770//CI51//ASK13//VPS35C//AtCIB22//AT4G32470//AT4G29480//AT4G00585//PBB1//AtPNC1//SDH5//AT2G03430//AT2G02510//ATP3 GO:0051603 proteolysis involved in cellular protein... BP 2.51695349166557e-05 AT5G26710//FRO1//ADK1//AT5G37890//AT5G11770//CI51//UPL4//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//AT3G18190//PAE2//AtUBP13//AtPNC1//SDH5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0044257 cellular protein catabolic process BP 3.75525690182693e-05 AT5G26710//FRO1//ADK1//AT5G37890//AT5G11770//CI51//UPL4//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//AT3G18190//PAE2//AtUBP13//AtPNC1//SDH5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0030163 protein catabolic process BP 5.26506588298667e-05 AT5G26710//FRO1//ADK1//AT5G37890//AT5G11770//CI51//UPL4//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//AT3G18190//PAE2//AtUBP13//AtPNC1//SDH5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0022900 electron transport chain BP 0.00065655933427801 PSBF//PSBE//FRO1//AT5G11770//CI51//AT4G32470//SDH1-2 GO:0044265 cellular macromolecule catabolic process BP 0.00103850165453604 AT5G26710//FRO1//ADK1//AT5G37890//AT5G11770//CI51//UPL4//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//AT3G18190//PAE2//AtUBP13//AtPNC1//SDH5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0042775 mitochondrial ATP synthesis coupled elec... BP 0.00113553242393563 AT5G11770//CI51//AT4G32470//SDH1-2 GO:0022607 cellular component assembly BP 0.00114925169624194 PSBF//FRO1//ATNFS1//ADK1//ATMSI1//AtSWEET8//AT5G23910//AT5G11770//CI51//CASP4//ASK13//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//RIC1//SEC5A//PBB1//AtPNC1//AtGIP2//SPO11-2//SDH5//CYP86C3//AT1G54230//G-H2AX//G-H2AX//AT2G03430//AT2G02510//ATP3 GO:0065003 macromolecular complex assembly BP 0.00162719492359934 PSBF//FRO1//ADK1//ATMSI1//AT5G23910//AT5G11770//CI51//ASK13//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//SEC5A//PBB1//AtPNC1//AtGIP2//SPO11-2//SDH5//AT1G54230//G-H2AX//G-H2AX//AT2G03430//AT2G02510//ATP3 GO:0006461 protein complex assembly BP 0.00201703814944978 PSBF//FRO1//ADK1//AT5G23910//AT5G11770//CI51//ASK13//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//SEC5A//PBB1//AtPNC1//AtGIP2//SPO11-2//SDH5//AT1G54230//G-H2AX//G-H2AX//AT2G03430//AT2G02510//ATP3 GO:0070271 protein complex biogenesis BP 0.00208427488616438 PSBF//FRO1//ADK1//AT5G23910//AT5G11770//CI51//ASK13//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//SEC5A//PBB1//AtPNC1//AtGIP2//SPO11-2//SDH5//AT1G54230//G-H2AX//G-H2AX//AT2G03430//AT2G02510//ATP3 GO:0034622 cellular macromolecular complex assembly BP 0.00211734553007513 PSBF//FRO1//ADK1//AT5G11770//CI51//ASK13//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//SEC5A//PBB1//AtPNC1//AtGIP2//SPO11-2//SDH5//AT1G54230//G-H2AX//G-H2AX//AT2G03430//AT2G02510//ATP3 GO:0009057 macromolecule catabolic process BP 0.00218359073683206 AT5G26710//FRO1//ADK1//AT5G37890//AT5G11770//CI51//UPL4//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//AT3G18190//PAE2//AtUBP13//AtPNC1//SDH5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0043623 cellular protein complex assembly BP 0.00328601201359641 PSBF//FRO1//ADK1//AT5G11770//CI51//ASK13//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//SEC5A//PBB1//AtPNC1//AtGIP2//SPO11-2//SDH5//AT2G03430//AT2G02510//ATP3 GO:0006508 proteolysis BP 0.0035292391803521 AT5G26710//FRO1//ADK1//AALP//AT5G42320//AT5G37890//AT5G11770//CI51//AT5G03620//UPL4//AT3G61540//ASK13//VPS35C//AT3G46910//AtCIB22//AT4G32470//AT4G29480//AT4G00585//AMSH1//AT1G66620//PBB1//ASK7//AT3G18190//PAE2//AtUBP13//AtPNC1//SDH5//AT1G64830//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0006119 oxidative phosphorylation BP 0.00354353973900165 AT5G11770//CI51//AT4G32470//SDH1-2 GO:0042773 ATP synthesis coupled electron transport BP 0.00354353973900165 AT5G11770//CI51//AT4G32470//SDH1-2 GO:0035966 response to topologically incorrect prot... BP 0.00397371557224179 FRO1//ADK1//AT5G11770//CI51//ASK13//VPS35C//AGB1//AtCIB22//AT4G32470//AT4G29480//AT4G00585//PBB1//AtPNC1//SDH5//AT2G03430//AT2G02510//ATP3 GO:0071822 protein complex subunit organization BP 0.00446001665690714 PSBF//FRO1//ADK1//AT5G23910//AT5G11770//CI51//ASK13//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//RIC1//SEC5A//PBB1//AtPNC1//AtGIP2//SPO11-2//SDH5//AT1G54230//G-H2AX//G-H2AX//AT2G03430//AT2G02510//ATP3 GO:0009150 purine ribonucleotide metabolic process BP 0.00512374017453966 HINT4//AT5G11770//CI51//HINT1//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0006163 purine nucleotide metabolic process BP 0.0101215671154735 HINT4//AT5G11770//CI51//HINT1//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0071103 DNA conformation change BP 0.0101635024713335 ATMSI1//MCM3//H2B//SPO11-2//AT1G54230//G-H2AX//G-H2AX GO:0022904 respiratory electron transport chain BP 0.013803532959256 AT5G11770//CI51//AT4G32470//SDH1-2 GO:0046034 ATP metabolic process BP 0.0140904913791114 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0010351 lithium ion transport BP 0.0155279093330448 ATCHX4//ATNHX8//NTF2A//ATCHX8 GO:0009144 purine nucleoside triphosphate metabolic... BP 0.016338911190919 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0009199 ribonucleoside triphosphate metabolic pr... BP 0.016338911190919 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0009205 purine ribonucleoside triphosphate metab... BP 0.016338911190919 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0009141 nucleoside triphosphate metabolic proces... BP 0.01882346855649 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0009126 purine nucleoside monophosphate metaboli... BP 0.0201575351456138 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0009167 purine ribonucleoside monophosphate meta... BP 0.0201575351456138 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0072521 purine-containing compound metabolic pro... BP 0.0245608784543501 HINT4//AT5G11770//CI51//HINT1//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0000226 microtubule cytoskeleton organization BP 0.025803881736057 D6PKL2//AT5G23910//CUM2//DEI1//H2B//RIC1//AT1G63100//AtGIP2//EMB14//AT2G17930 GO:0043933 macromolecular complex subunit organizat... BP 0.0276838247727122 PSBF//FRO1//ADK1//ATMSI1//HAC07//MCM3//CHR4//AT5G23910//AT5G11770//CI51//ASK13//ATSMC1//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//RIC1//SEC5A//PBB1//AtPNC1//AtGIP2//EMB14//SPO11-2//SDH5//AT1G54230//G-H2AX//G-H2AX//AT2G03430//AT2G17930//AT2G45870//AT2G02510//ATP3 GO:0009161 ribonucleoside monophosphate metabolic p... BP 0.0295204077561905 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0000911 cytokinesis by cell plate formation BP 0.0296927587791738 D6PKL2//MCM3//AT5G23910//CUM2//DEI1//ATRAPTOR1B//AT1G63100//EMB14//AT2G17930 GO:0009119 ribonucleoside metabolic process BP 0.0302524077402135 AT5G11770//CI51//AT4G32470//AT4G29630//AT4G29480//SDH1-2//ATP3 GO:0031497 chromatin assembly BP 0.032794760030564 ATMSI1//H2B//AT1G54230//G-H2AX//G-H2AX GO:0009123 nucleoside monophosphate metabolic proce... BP 0.0331834739978803 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0000038 very long-chain fatty acid metabolic pro... BP 0.0333366386574179 DEI1//KCS7//AT1G24360 GO:0032506 cytokinetic process BP 0.0335950340106639 D6PKL2//MCM3//AT5G23910//CUM2//DEI1//ATRAPTOR1B//AT1G63100//EMB14//AT2G17930 GO:1902410 mitotic cytokinetic process BP 0.0335950340106639 D6PKL2//MCM3//AT5G23910//CUM2//DEI1//ATRAPTOR1B//AT1G63100//EMB14//AT2G17930 GO:0006323 DNA packaging BP 0.0374727763472287 ATMSI1//H2B//AT1G54230//G-H2AX//G-H2AX GO:0007017 microtubule-based process BP 0.039598901330909 D6PKL2//AT5G23910//CUM2//DEI1//H2B//RIC1//AT1G63100//AtGIP2//EMB14//AT2G17930//AT2G37420 GO:0009631 cold acclimation BP 0.0400314556066646 FRO1//HOS10 GO:1990542 mitochondrial transmembrane transport BP 0.0400314556066646 AT5G41950//emb2474 GO:0044085 cellular component biogenesis BP 0.040444941012239 PSBF//FRO1//ATNFS1//ADK1//ATMSI1//AtSWEET8//AT5G23910//AT5G11770//CI51//CASP4//ASK13//ATSMC1//AT3G53430//VPS35C//H2B//AtCIB22//AT4G32470//AT4G29480//AT4G00585//RIC1//SEC5A//PBB1//AtPNC1//AtGIP2//SPO11-2//SDH5//FUT7//CYP86C3//AT1G54230//G-H2AX//G-H2AX//AT2G03430//AT2G16980//AT2G02510//ATP3 GO:0000281 mitotic cytokinesis BP 0.0408621441355516 D6PKL2//MCM3//AT5G23910//CUM2//DEI1//ATRAPTOR1B//AT1G63100//EMB14//AT2G17930 GO:0006333 chromatin assembly or disassembly BP 0.0435899945019338 ATMSI1//CHR4//H2B//AT1G54230//G-H2AX//G-H2AX GO:0061640 cytoskeleton-dependent cytokinesis BP 0.0440454591524035 D6PKL2//MCM3//AT5G23910//CUM2//DEI1//ATRAPTOR1B//AT1G63100//EMB14//AT2G17930 GO:0045333 cellular respiration BP 0.0458903998518876 AT5G11770//CI51//AT4G32470//AT4G22310//ATPRXIIF//SDH1-2 GO:0042138 meiotic DNA double-strand break formatio... BP 0.047999960237652 AT5G12310//AT3G61340//AT1G69630//SPO11-2//AT2G03430 GO:0009860 pollen tube growth BP 0.0480372354176472 AtCPK34//AtSWEET8//AT4G31230//RIC1//SEC5A//AT3G19020//RIC6//AT3G26870//AT3G03080//ATSYP124 GO:0046128 purine ribonucleoside metabolic process BP 0.0507141176702874 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0009116 nucleoside metabolic process BP 0.0508014835478474 AT5G11770//CI51//AT4G32470//AT4G29630//AT4G29480//SDH1-2//ATP3 GO:0044248 cellular catabolic process BP 0.053107382969484 AT5G27920//AT5G26710//FRO1//ADK1//AALP//AT5G37890//AT5G11770//CI51//UPL4//AT3G63220//AtLCD//ASK13//VPS35C//AT3G46910//AGB1//AtCIB22//AT4G32470//AT4G30790//AT4G29630//AT4G29480//LIF2//AT4G00585//AMSH1//AT1G66620//ABCE1//PBB1//ASK7//AT3G18190//PAE2//AtUBP13//AtPNC1//AT1G02360//ATGSTF5//SDH5//LAC5//MMZ3//AT2G03430//AT2G02510//ATP3 GO:0042278 purine nucleoside metabolic process BP 0.0532381074459053 AT5G11770//CI51//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0006096 glycolytic process BP 0.0534392405155963 FRO1//ADK1//AALP//AT4G32470//AT4G22310//PBB1//AT3G18190//ATPRXIIF GO:0009060 aerobic respiration BP 0.0540955861187534 AT4G32470//AT4G22310//ATPRXIIF//SDH1-2 GO:0002238 response to molecule of fungal origin BP 0.0562548043156843 AT5G63940//AT4G31230//AT1G69080 GO:0035725 sodium ion transmembrane transport BP 0.0562548043156843 ATCHX4//ATNHX8//ATCHX8 GO:0007059 chromosome segregation BP 0.0576003197132196 AT5G12310//AT5G59740//AT3G61340//ATSMC1//ATRAPTOR1B//AT1G69630//SPO11-2//AT2G03430 GO:0015672 monovalent inorganic cation transport BP 0.0584246232389319 ATCHX4//ATVHA-C3//ATCNGC9//AT4G29480//ATNHX8//NTF2A//KAB1//ATCHX8//ATP3 GO:0015980 energy derivation by oxidation of organi... BP 0.0585115842301506 AT5G11770//CI51//AT4G32470//AT4G22310//ATPRXIIF//SDH1-2 GO:0016126 sterol biosynthetic process BP 0.0585115842301506 AT1G16570//AT1G77350//ATB5-B//PUT4//ERD2B//HYD1 GO:0006090 pyruvate metabolic process BP 0.0645140652448032 FRO1//ADK1//AALP//AtLCD//AT4G32470//AT4G22310//PBB1//AT3G18190//ATPRXIIF GO:0006334 nucleosome assembly BP 0.0659698819531136 H2B//AT1G54230//G-H2AX//G-H2AX GO:0034728 nucleosome organization BP 0.0659698819531136 H2B//AT1G54230//G-H2AX//G-H2AX GO:0009259 ribonucleotide metabolic process BP 0.0665240591270055 HINT4//AT5G11770//CI51//HINT1//AT4G32470//AT4G29480//SDH1-2//ATP3 GO:0000910 cytokinesis BP 0.0666299591492134 D6PKL2//MCM3//AT5G23910//CUM2//DEI1//ATRAPTOR1B//AT1G63100//EMB14//AT2G17930 GO:0016125 sterol metabolic process BP 0.0669874278649573 AT1G16570//AT1G77350//ATB5-B//PUT4//ERD2B//HYD1 GO:0018208 peptidyl-proline modification BP 0.0743535449606869 DEI1//AT4G35820 GO:0022402 cell cycle process BP 0.0745159345799501 AT5G12310//AT5G59740//ATMSI1//D6PKL2//MCM3//AT5G23910//AT3G61340//CUM2//ASK13//ATSMC1//DEI1//ATRAPTOR1B//AT1G63100//AT1G69630//EMB14//SPO11-2//AT2G03430//AT2G17930 GO:0065004 protein-DNA complex assembly BP 0.0745770637448287 H2B//AT1G54230//G-H2AX//G-H2AX GO:0071824 protein-DNA complex subunit organization BP 0.0745770637448287 H2B//AT1G54230//G-H2AX//G-H2AX GO:0009856 pollination BP 0.0789199652297231 AtCPK34//AtSWEET8//APY2//AT4G31230//RIC1//SEC5A//AT3G19020//RIC6//AT3G26870//AT3G03080//ATSYP124//AT1G61460 GO:0044706 multi-multicellular organism process BP 0.0789199652297231 AtCPK34//AtSWEET8//APY2//AT4G31230//RIC1//SEC5A//AT3G19020//RIC6//AT3G26870//AT3G03080//ATSYP124//AT1G61460 GO:0098655 cation transmembrane transport BP 0.0793433940728052 ATCHX4//ATVHA-C3//AT4G29480//ATNHX8//ATCHX8//ATP3 GO:0098662 inorganic cation transmembrane transport BP 0.0793433940728052 ATCHX4//ATVHA-C3//AT4G29480//ATNHX8//ATCHX8//ATP3 GO:0098660 inorganic ion transmembrane transport BP 0.0826196159851738 ATCHX4//ATVHA-C3//AT4G29480//ATNHX8//ATCHX8//ATP3 GO:0009767 photosynthetic electron transport chain BP 0.0840010908223268 PSBF//PSBE GO:1902600 hydrogen ion transmembrane transport BP 0.0848467213620624 ATVHA-C3//AT4G29480//ATP3 GO:0007062 sister chromatid cohesion BP 0.089394551602764 AT5G12310//AT5G59740//ATSMC1//ATRAPTOR1B//SPO11-2//AT2G03430 GO:0046488 phosphatidylinositol metabolic process BP 0.092892421728879 AT5G57815//AT5G03345//AT3G29330//AT3G03070//AT3G11530//FRA3 GO:0006661 phosphatidylinositol biosynthetic proces... BP 0.0930861106288155 AT5G57815//AT5G03345//AT3G29330//AT3G03070//AT3G11530 GO:1902589 single-organism organelle organization BP 0.0934716725857444 AT5G12310//AT5G59740//ATMSI1//HAC07//D6PKL2//MCM3//AT5G41950//AT5G23910//AT3G61340//CUM2//ATSMC1//DEI1//emb2474//H2B//LIF2//RIC1//SEC5A//AT3G03080//ATRAPTOR1B//AT1G63100//AtGIP2//AT1G69630//EMB14//SPO11-2//NTF2A//AT2G03430//AT2G17930//AT2G45870 GO:0006289 nucleotide-excision repair BP 0.0940025041962662 AT4G05250//ATOGG1 GO:0007049 cell cycle BP 0.0951581251624459 AT5G12310//AT5G59740//ATMSI1//EMB2812//D6PKL2//MCM3//AT5G45190//AT5G23910//AT3G61340//CUM2//ASK13//ATSMC1//DEI1//ATRAPTOR1B//AT1G63100//AT1G69630//EMB14//SPO11-2//MMZ3//ATEPR1//AT2G03430//AT2G17930//ATGPA1 GO:0007010 cytoskeleton organization BP 0.0985878548101223 AT5G26710//D6PKL2//AT5G23910//CUM2//DEI1//H2B//RIC1//SEC5A//AT3G18190//AT3G03080//AT1G63100//AtGIP2//EMB14//SPO11-2//AT2G17930 GO:0046686 response to cadmium ion BP 0.099155696881054 FRO1//ADK1//AALP//CCoAOMT1//AT4G32470//AT4G29480//AT4G22310//WAKL4//PBB1//AT3G18190//ATPRXIIF//AT3G01860//AS1 GO:0048868 pollen tube development BP 0.0995732447427359 AtCPK34//AtSWEET8//AT4G31230//RIC1//SEC5A//AT3G19020//RIC6//AT3G26870//AT3G03080//ATSYP124 GO:0006694 steroid biosynthetic process BP 0.0999647858508946 CES//AT1G16570//AT1G77350//ATB5-B//PUT4//ERD2B//HYD1 GO:0009630 gravitropism BP 0.100106461491839 AT5G45190//CUM2//ATSMC1//AtUBP13//EMB14//AT1G02890