GOID	TERM	ONTOLOGY	pValue	Genes
GO:0001510	RNA methylation	BP	0.000133503361377473	AT4G15640//AT5G15520//ATFIB2//RPL10B//AT2G32220//AT2G37990//HDA13
GO:0009451	RNA modification	BP	0.000298440164453825	AT4G15640//AT5G15520//ATFIB2//AT3G04450//ATECB2//RPL10B//AT2G32220//AT2G37990//HDA13//OTP85
GO:0043414	macromolecule methylation	BP	0.00128411690554453	AT4G15640//AT5G15520//ATFIB2//DECOY//RPL10B//AT2G32220//AT2G37990//HDA13//ATPRMT1A
GO:0032259	methylation	BP	0.00140792594467125	AT4G15640//AT5G15520//ATFIB2//DECOY//RPL10B//AT2G32220//AT2G37990//HDA13//ATPRMT1A
GO:1901136	carbohydrate derivative catabolic proces...	BP	0.00335239199933168	AT4G29570//AT4G29600//ATFUC1
GO:0009119	ribonucleoside metabolic process	BP	0.0038488568422497	NDHD//AHA3//AT4G29570//AT4G29600
GO:0008033	tRNA processing	BP	0.00506069144833872	AT5G15810//ATFIB2//AtRLG1
GO:0046131	pyrimidine ribonucleoside metabolic proc...	BP	0.00577502187468532	AT4G29570//AT4G29600
GO:0009116	nucleoside metabolic process	BP	0.00661913669452114	NDHD//AHA3//AT4G29570//AT4G29600
GO:0006213	pyrimidine nucleoside metabolic process	BP	0.00834168186812499	AT4G29570//AT4G29600
GO:0072527	pyrimidine-containing compound metabolic...	BP	0.00864433595998632	PNM1//AT4G29570//AT4G29600//ATFIB2//AT1G63810
GO:0009612	response to mechanical stimulus	BP	0.0091297164298335	ERF104//TCH4//AT1G18740
GO:0048598	embryonic morphogenesis	BP	0.00978347267787998	DOT4//TAR1
GO:0006139	nucleobase-containing compound metabolic...	BP	0.014879012605472	NDHD//PSBN//AT4G15640//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//PNM1//AHA3//AT5G08600//DREB2//AT3G48425//AT4G39780//ABF3//AT4G29570//AT4G29600//ATFIB2//RAP2.4//AT3G04450//ATWHY2//AT1G63810//AtRLG1//ATECB2//RPL10B//AT1G62070//AT1G03830//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:0006606	protein import into nucleus	BP	0.0161823824357689	AT5G15810//AT2G04050//AT1G03830//AT2G37990
GO:0044744	protein targeting to nucleus	BP	0.0161823824357689	AT5G15810//AT2G04050//AT1G03830//AT2G37990
GO:1902593	single-organism nuclear import	BP	0.0161823824357689	AT5G15810//AT2G04050//AT1G03830//AT2G37990
GO:1901658	glycosyl compound catabolic process	BP	0.0165471127037324	AT4G29570//AT4G29600
GO:0034504	protein localization to nucleus	BP	0.0168424020681164	AT5G15810//AT2G04050//AT1G03830//AT2G37990
GO:0051170	nuclear import	BP	0.0168424020681164	AT5G15810//AT2G04050//AT1G03830//AT2G37990
GO:0009259	ribonucleotide metabolic process	BP	0.0204379960438767	NDHD//PNM1//AHA3//ATFIB2//AT1G63810
GO:0009631	cold acclimation	BP	0.0270610180966068	ERD10//AtCOR47
GO:0042991	transcription factor import into nucleus	BP	0.0270610180966068	AT2G04050//AT1G03830
GO:0006913	nucleocytoplasmic transport	BP	0.0326622931206667	AT5G15810//AT2G04050//AT1G03830//AT2G37990
GO:0051169	nuclear transport	BP	0.0326622931206667	AT5G15810//AT2G04050//AT1G03830//AT2G37990
GO:0046483	heterocycle metabolic process	BP	0.0358352577826305	NDHD//PSBN//AT4G15640//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//PNM1//AHA3//AT5G08600//DREB2//AT3G48425//AT4G39780//ABF3//ACDO1//AT4G29570//AT4G29600//ATFIB2//RAP2.4//AT3G04450//ATWHY2//AT1G63810//AtRLG1//ATECB2//RPL10B//AT1G62070//AT1G03830//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:0034641	cellular nitrogen compound metabolic pro...	BP	0.0367470981236663	NDHD//PSBN//AT4G15640//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//PNM1//AHA3//AT5G08600//DREB2//AT3G48425//AT4G39780//ABF3//ACDO1//AT4G29570//AT4G29600//ATFIB2//RAP2.4//AT3G04450//ATWHY2//AT1G63810//AtRLG1//ATECB2//RPL10B//AT1G62070//AT1G03830//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:0090304	nucleic acid metabolic process	BP	0.0394705205248564	NDHD//PSBN//AT4G15640//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//AT5G08600//DREB2//AT3G48425//AT4G39780//ABF3//ATFIB2//RAP2.4//AT3G04450//ATWHY2//AtRLG1//ATECB2//RPL10B//AT1G62070//AT1G03830//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:0016070	RNA metabolic process	BP	0.0396919637856827	NDHD//PSBN//AT4G15640//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//AT5G08600//DREB2//AT4G39780//ABF3//ATFIB2//RAP2.4//AT3G04450//ATWHY2//AtRLG1//ATECB2//RPL10B//AT1G62070//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:0009414	response to water deprivation	BP	0.0435637166240941	AT1G51090//DREB2//ABF3//RAP2.4//ERD10//AtCOR47
GO:0006163	purine nucleotide metabolic process	BP	0.043812172274652	NDHD//AHA3//ATFIB2
GO:0006725	cellular aromatic compound metabolic pro...	BP	0.0458581923785483	NDHD//PSBN//AT4G15640//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//PNM1//AHA3//FAR1//AT5G08600//DREB2//AT3G48425//AT4G39780//ABF3//ACDO1//AT4G29570//AT4G29600//ATFIB2//RAP2.4//AT3G04450//ATWHY2//AT1G63810//AtRLG1//ATECB2//RPL10B//AT1G62070//AT1G03830//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:0009415	response to water	BP	0.0468695202245515	AT1G51090//DREB2//ABF3//RAP2.4//ERD10//AtCOR47
GO:0046034	ATP metabolic process	BP	0.0509055307774039	NDHD//AHA3
GO:0006807	nitrogen compound metabolic process	BP	0.0516943541190787	NDHD//PSBN//AT4G15640//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//PNM1//AHA3//AT5G08600//DREB2//AT3G48425//AT4G39780//ABF3//ACDO1//AT4G29570//AT4G29600//ATFIB2//RAP2.4//AT3G04450//ATWHY2//CML23//ATIMD2//AT1G63810//AtRLG1//ATECB2//RPL10B//AT1G62070//AT1G03830//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:1901360	organic cyclic compound metabolic proces...	BP	0.0516943541190787	NDHD//PSBN//AT4G15640//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//PNM1//AHA3//FAR1//AT5G08600//DREB2//AT3G48425//AT4G39780//ABF3//ACDO1//AT4G29570//AT4G29600//ATFIB2//ORP2B//RAP2.4//AT3G04450//ATWHY2//AT1G63810//AtRLG1//ATECB2//RPL10B//AT1G62070//AT1G03830//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:0009260	ribonucleotide biosynthetic process	BP	0.0536441757658051	PNM1//AHA3//ATFIB2//AT1G63810
GO:0046390	ribose phosphate biosynthetic process	BP	0.0563398057481697	PNM1//AHA3//ATFIB2//AT1G63810
GO:0070646	protein modification by small protein re...	BP	0.0596874574481759	PNM1//AT2G37990//AT2G38180
GO:0009141	nucleoside triphosphate metabolic proces...	BP	0.0600514680824812	NDHD//AHA3
GO:0009144	purine nucleoside triphosphate metabolic...	BP	0.0600514680824812	NDHD//AHA3
GO:0009199	ribonucleoside triphosphate metabolic pr...	BP	0.0600514680824812	NDHD//AHA3
GO:0009205	purine ribonucleoside triphosphate metab...	BP	0.0600514680824812	NDHD//AHA3
GO:0072521	purine-containing compound metabolic pro...	BP	0.0615978209449054	NDHD//AHA3//ATFIB2
GO:0010467	gene expression	BP	0.0628148113698169	NDHD//PSBN//AT5G15810//AT5G15520//AT5G66970//AT5G63700//ERF104//AT5G43640//AT5G39850//DREB2//AT4G39780//ABF3//RAP2.4//AT3G04450//ATWHY2//AtRLG1//RPL10B//AT1G62070//AT2G32220//AT-RS2Z33//AT2G37990//HDA13//OTP85
GO:0006406	mRNA export from nucleus	BP	0.0664379203578062	AT5G15810//AT2G37990
GO:0051028	mRNA transport	BP	0.0664379203578062	AT5G15810//AT2G37990
GO:0048580	regulation of post-embryonic development	BP	0.0673650933630378	ERD10//CML23//DECOY//AT2G37990//ATPRMT1A
GO:0009165	nucleotide biosynthetic process	BP	0.0686002791958574	PNM1//AHA3//ATFIB2//AT1G63810//HDA13
GO:0017038	protein import	BP	0.0693576685803329	AT5G15810//AT2G04050//AT1G03830//AT2G37990
GO:0010051	xylem and phloem pattern formation	BP	0.0697126748679761	DOT4//TAR1
GO:1901293	nucleoside phosphate biosynthetic proces...	BP	0.0698480983610015	PNM1//AHA3//ATFIB2//AT1G63810//HDA13
GO:0006403	RNA localization	BP	0.073039536558407	AT5G15810//AT2G37990
GO:0006405	RNA export from nucleus	BP	0.073039536558407	AT5G15810//AT2G37990
GO:0048825	cotyledon development	BP	0.073039536558407	DOT4//TAR1
GO:0050657	nucleic acid transport	BP	0.073039536558407	AT5G15810//AT2G37990
GO:0050658	RNA transport	BP	0.073039536558407	AT5G15810//AT2G37990
GO:0051236	establishment of RNA localization	BP	0.073039536558407	AT5G15810//AT2G37990
GO:0006399	tRNA metabolic process	BP	0.0736480917588283	AT5G15810//ATFIB2//AtRLG1
GO:0009909	regulation of flower development	BP	0.077206528974952	CML23//DECOY//AT2G37990//ATPRMT1A
GO:0009126	purine nucleoside monophosphate metaboli...	BP	0.0798430333965834	NDHD//AHA3
GO:0009167	purine ribonucleoside monophosphate meta...	BP	0.0798430333965834	NDHD//AHA3
GO:0051168	nuclear export	BP	0.0798430333965834	AT5G15810//AT2G37990
GO:0009123	nucleoside monophosphate metabolic proce...	BP	0.0833164707645919	NDHD//AHA3
GO:0009161	ribonucleoside monophosphate metabolic p...	BP	0.0833164707645919	NDHD//AHA3
GO:0006396	RNA processing	BP	0.0859987866557594	AT5G66970//ATWHY2//AtRLG1//AT-RS2Z33//HDA13//OTP85
GO:0055086	nucleobase-containing small molecule met...	BP	0.0878184339921946	NDHD//PNM1//AHA3//AT4G29570//AT4G29600//ATFIB2//AT1G63810//HDA13
GO:0009220	pyrimidine ribonucleotide biosynthetic p...	BP	0.0889230358652466	PNM1//ATFIB2//AT1G63810
GO:0009218	pyrimidine ribonucleotide metabolic proc...	BP	0.0935148348751088	PNM1//ATFIB2//AT1G63810
GO:0009409	response to cold	BP	0.0935718135004695	AT1G51090//TCH4//AT2S3//RAP2.4//ERD10//AtCOR47//KCS4
GO:0006220	pyrimidine nucleotide metabolic process	BP	0.0958471323079724	PNM1//ATFIB2//AT1G63810
GO:0006221	pyrimidine nucleotide biosynthetic proce...	BP	0.0958471323079724	PNM1//ATFIB2//AT1G63810
GO:0048831	regulation of shoot system development	BP	0.0959677097503583	CML23//DECOY//AT2G37990//ATPRMT1A
GO:0010200	response to chitin	BP	0.0974165750293995	atnudt21//ERF104//TCH4//DREB2//AT1G18740
GO:0010243	response to organonitrogen compound	BP	0.103512842798758	atnudt21//ERF104//TCH4//DREB2//AT1G18740
GO:0009150	purine ribonucleotide metabolic process	BP	0.10506465107336	NDHD//AHA3
GO:0042278	purine nucleoside metabolic process	BP	0.10882703569064	NDHD//AHA3
GO:0046128	purine ribonucleoside metabolic process	BP	0.10882703569064	NDHD//AHA3
GO:2000241	regulation of reproductive process	BP	0.110842258742523	CML23//DECOY//AT2G37990//ATPRMT1A
GO:0000469	cleavage involved in rRNA processing	BP	0.111483176631349	093_
GO:0000478	endonucleolytic cleavage involved in rRN...	BP	0.111483176631349	093_
GO:0022904	respiratory electron transport chain	BP	0.111483176631349	962_
GO:0090502	RNA phosphodiester bond hydrolysis, endo...	BP	0.111483176631349	093_
GO:0000338	protein deneddylation	BP	0.112625047004667	PNM1//AT2G37990
GO:0010388	cullin deneddylation	BP	0.112625047004667	PNM1//AT2G37990
GO:0072528	pyrimidine-containing compound biosynthe...	BP	0.115337219022184	PNM1//ATFIB2//AT1G63810
GO:0034655	nucleobase-containing compound catabolic...	BP	0.116457352623523	AT4G29570//AT4G29600
GO:0000394	RNA splicing, via endonucleolytic cleava...	BP	0.120322645921618	ATWHY2//AtRLG1
GO:0010224	response to UV-B	BP	0.120322645921618	DREB2//RPL10B
GO:0010286	heat acclimation	BP	0.120322645921618	DREB2//AtCOR47
GO:0006730	one-carbon metabolic process	BP	0.121931029023976	621_
GO:0090501	RNA phosphodiester bond hydrolysis	BP	0.121931029023976	093_
GO:1901698	response to nitrogen compound	BP	0.125647350664364	atnudt21//AT5G66970//ERF104//TCH4//DREB2//AT1G18740//HDA13
GO:0006551	leucine metabolic process	BP	0.132257333310872	285_
GO:0009082	branched-chain amino acid biosynthetic p...	BP	0.132257333310872	285_
GO:0006164	purine nucleotide biosynthetic process	BP	0.136088442391044	AHA3//ATFIB2
GO:0009611	response to wounding	BP	0.137050996138802	ERF104//TCH4//FAR1//AT1G18740
GO:0034470	ncRNA processing	BP	0.142081290291435	AT5G15810//AT5G08600//ATFIB2//AtRLG1//AT2G37990
GO:0015931	nucleobase-containing compound transport	BP	0.152283936839024	AT5G15810//AT2G37990
GO:0072522	purine-containing compound biosynthetic ...	BP	0.152283936839024	AHA3//ATFIB2