GOID	TERM	ONTOLOGY	pValue	Genes
GO:0044550	secondary metabolite biosynthetic proces...	BP	0.00030920226929179	AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//CYP84A1//AT4G34950//ATCAD5//ATRP1//AT1G66800//FEI1//APS1//MAT4//VTC4//CCOAMT//ACO2//KCS1//ATMYC2//AT1G75900//BGLU46//BGLU45//ATPCS2//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0016144	S-glycoside biosynthetic process	BP	0.000547187403119073	AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//AT4G34950//ATRP1//FEI1//APS1//VTC4//ATMYC2//AT1G75900//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0019758	glycosinolate biosynthetic process	BP	0.000547187403119073	AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//AT4G34950//ATRP1//FEI1//APS1//VTC4//ATMYC2//AT1G75900//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0019761	glucosinolate biosynthetic process	BP	0.000547187403119073	AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//AT4G34950//ATRP1//FEI1//APS1//VTC4//ATMYC2//AT1G75900//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0050801	ion homeostasis	BP	0.000612091330998506	ACA4//AtG3Pp4//ATCNGC18//ATCBL2//ATBAG1//CAT3//ATSOS3//ATCHX20//AtG3Pp1//ACO1//ATCBL10//ATCHX17//AtCRT1a//ATGSR2//GAMMA-TIP2//ATRALF23//ATMT-1//AT3G11620//GAD2//ATECA3//ACO4//PIP2;6//ATGLR2.9
GO:1901137	carbohydrate derivative biosynthetic pro...	BP	0.000765340860627714	ACA4//ATP8//ATWRKY75//AtGGPPS11//HCF164//EMB2754//ATNUC-L1//AT5G60990//ATXYLT//AT5G55600//PYL1//CHL//OLI7//AT5G14050//ATEIF2-A2//AT5G03430//ALG10//ARATH;BSAS3;1//AT3G57490//ATPURM//CGL//AT4G34950//AT4G26940//ATPAP24//ATRP1//ATSS4//AT4G01210//FEI1//APS1//AT3G23870//PYRB//RACK1C//MAT4//RPS10//VTC4//AT3G01380//AT3G10530//DGD1//AT1G52320//ATFT4//AT1G63810//ATSBT3.5//HGPT//ATMYC2//AT1G75900//LEW1//AT1G23230//AT2G25300//AT1G11880//AT1G61790//ATECA3//AT1G05170//ATMAK10//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0048878	chemical homeostasis	BP	0.000919809335136844	ACA4//AtG3Pp4//ATCNGC18//ATCBL2//ATBAG1//CAT3//ATSOS3//CBB3//ATCHX20//AtG3Pp1//ACO1//ATCBL10//ATCHX17//AtCRT1a//ATGSR2//GAMMA-TIP2//ATRALF23//ATMT-1//AT3G11620//APUM23//GAD2//ATECA3//ACO4//PIP2;6//ATGLR2.9
GO:0016143	S-glycoside metabolic process	BP	0.00171688070642296	AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//AT4G34950//ATRP1//FEI1//APS1//VTC4//ATMYC2//AT1G75900//ESP//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0019757	glycosinolate metabolic process	BP	0.00171688070642296	AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//AT4G34950//ATRP1//FEI1//APS1//VTC4//ATMYC2//AT1G75900//ESP//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0019760	glucosinolate metabolic process	BP	0.00171688070642296	AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//AT4G34950//ATRP1//FEI1//APS1//VTC4//ATMYC2//AT1G75900//ESP//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0055080	cation homeostasis	BP	0.00240929049860491	ACA4//ATCNGC18//ATCBL2//ATBAG1//CAT3//ATSOS3//ATCHX20//ACO1//ATCHX17//AtCRT1a//ATGSR2//GAMMA-TIP2//ATRALF23//ATMT-1//AT3G11620//GAD2//ATECA3//ACO4//PIP2;6//ATGLR2.9
GO:0018871	1-aminocyclopropane-1-carboxylate metabo...	BP	0.00274006624019614	ACS8//ACS11//AT1G77670//ACS10//ACC4
GO:0042218	1-aminocyclopropane-1-carboxylate biosyn...	BP	0.00274006624019614	ACS8//ACS11//AT1G77670//ACS10//ACC4
GO:0010264	myo-inositol hexakisphosphate biosynthet...	BP	0.00305671830925947	AT5G06980//AT4G26860//AKT2//AtSLP1//VTC4//NDF2//BBX25//BBX18//AtCCA1
GO:0033517	myo-inositol hexakisphosphate metabolic ...	BP	0.00305671830925947	AT5G06980//AT4G26860//AKT2//AtSLP1//VTC4//NDF2//BBX25//BBX18//AtCCA1
GO:0043647	inositol phosphate metabolic process	BP	0.00338243306916464	AT5G06980//AT4G33770//AT4G26860//AKT2//AtSLP1//VTC4//AT1G71710//NDF2//BBX25//BBX18//AtCCA1
GO:0032958	inositol phosphate biosynthetic process	BP	0.00368950692870912	AT5G06980//AT4G26860//AKT2//AtSLP1//VTC4//NDF2//BBX25//BBX18//AtCCA1
GO:1901659	glycosyl compound biosynthetic process	BP	0.00393885406642508	ACA4//AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//AT4G34950//ATRP1//FEI1//APS1//MAT4//VTC4//HGPT//ATMYC2//AT1G75900//ATECA3//ATGRP-3//BASS2//AKN1//AT2G30930
GO:0009741	response to brassinosteroid	BP	0.00477119040284866	AXR5//IAA14//ANAC083//BHLH136//AT3G17100//IAA19//ATRALF23//SAUR27//SAUR28//AUF1//GASA1//IAA3//MAKR4
GO:0019748	secondary metabolic process	BP	0.00555465904770527	AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//AT5G01720//ARATH;BSAS3;1//AT4G38540//CYP84A1//AT4G34950//ATCAD5//ATCHX17//ATRP1//AT1G66800//FEI1//ATGSR2//APS1//AGP12//ATPURC//AT3G17100//MAT4//VTC4//ATGSTU8//ATDPL1//CCOAMT//ATGSTU10//ACO2//KCS1//ATMYC2//AT1G75900//ESP//BGLU46//BGLU45//ATPCS2//ATGRP-3//AT2G41380//BASS2//ATHPT//AKN1//AT2G30930//SCPL8
GO:0042181	ketone biosynthetic process	BP	0.00722769785313806	ATPURM//AT4G26860//AT1G50000//SPS1//ATSK1//EMB3147
GO:1901661	quinone metabolic process	BP	0.00722769785313806	ATPURM//AT4G26860//AT1G50000//SPS1//ATSK1//EMB3147
GO:1901663	quinone biosynthetic process	BP	0.00722769785313806	ATPURM//AT4G26860//AT1G50000//SPS1//ATSK1//EMB3147
GO:0006743	ubiquinone metabolic process	BP	0.00755523724298106	ATPURM//AT4G26860//AT1G50000//ATSK1//EMB3147
GO:0006744	ubiquinone biosynthetic process	BP	0.00755523724298106	ATPURM//AT4G26860//AT1G50000//ATSK1//EMB3147
GO:0006662	glycerol ether metabolic process	BP	0.00779757614169022	WCRKC2//HCF164//ACHT2//ACHT3//ATPDI6//AT1G52990//ATCDSP32
GO:0042592	homeostatic process	BP	0.00819743820548148	ACA4//AtG3Pp4//WCRKC2//HCF164//ATCNGC18//ATCBL2//ATBAG1//GRXC2//CAT3//ATSOS3//CBB3//ATCHX20//AtG3Pp1//ACO1//ATCBL10//ACHT2//ATCHX17//ACHT3//AT1G50950//AtCRT1a//ATGSR2//GAMMA-TIP2//ATRALF23//ATMT-1//AT3G11620//ATPDI6//APUM23//AT1G52990//ATCDSP32//GAD2//ATECA3//ACO4//PIP2;6//ATGLR2.9
GO:0009809	lignin biosynthetic process	BP	0.00946499541080759	CYP84A1//ATCAD5//AT1G66800//MAT4//CCOAMT//BGLU46//BGLU45
GO:0018904	ether metabolic process	BP	0.00946499541080759	WCRKC2//HCF164//ACHT2//ACHT3//ATPDI6//AT1G52990//ATCDSP32
GO:0098771	inorganic ion homeostasis	BP	0.00956430364160495	ACA4//AtG3Pp4//ATCNGC18//ATCBL2//ATSOS3//ATCHX20//AtG3Pp1//ACO1//ATCHX17//AtCRT1a//ATMT-1//ATECA3//ATGLR2.9
GO:1901566	organonitrogen compound biosynthetic pro...	BP	0.0104204844457496	ACA4//DHDPS2//AT1G35190//SQE1//AT-P5C1//ATNUC-L1//STR16//AT5G60990//AtNMNAT//PYL1//CHL//OLI7//CAT3//AT5G14050//ATEIF2-A2//AT5G03430//ARATH;BSAS3;1//AT3G57490//ATPURM//ATMAPR3//ATPRP4//CGL//ACS8//PSAT//AT4G26310//CGA1//ACS11//ATGSR2//APS1//ATPURC//GAMMA-TIP2//PYRB//LAG1//RACK1C//MAT4//RPS10//AT3G10530//DGD1//AT3G11620//ADT2//AT1G77670//AT1G63810//ACO2//ACS10//HGPT//AT1G01630//ATMYC2//GASA1//ADC1//AT1G09310//ATGLK1//AT2G04400//BLH1//ATNAS3//ATECA3//TH-1//ATPCS2//AT2G20690//ATGRP-3//ALD1//ACC4//ATHPT//NAPRT2//SCPL8
GO:0009963	positive regulation of flavonoid biosynt...	BP	0.0116134894028088	ANAC083//AT5G20700//AT5G41400//ATCAD5//AT4G05590//AT3G27210//ATMYC2//GAD2//BLH1//AT2G30930
GO:0044272	sulfur compound biosynthetic process	BP	0.0131041079226855	SQE1//AT5G08415//AtGGPPS11//HCF164//PYL1//CHL//AT5G03430//ARATH;BSAS3;1//ATPRP4//CGL//AT4G34950//ATRP1//FEI1//APS1//GAMMA-TIP2//MAT4//VTC4//AT3G11620//ACO2//AT1G01630//ATMYC2//AT1G75900//AT1G09310//BLH1//TH-1//ATGRP-3//BASS2//ATHPT//AKN1//AT2G30930//SCPL8
GO:0006833	water transport	BP	0.0134928141275026	AT4G15545//ATP8//AT5G20700//ATBAG1//ARATH;BSAS3;1//ACO1//PIP1;5//ATGSR2//APS1//GAMMA-TIP2//RCI2A//ACO2//GAD2//PIP2;6
GO:0042044	fluid transport	BP	0.0134928141275026	AT4G15545//ATP8//AT5G20700//ATBAG1//ARATH;BSAS3;1//ACO1//PIP1;5//ATGSR2//APS1//GAMMA-TIP2//RCI2A//ACO2//GAD2//PIP2;6
GO:0030003	cellular cation homeostasis	BP	0.0149884017704928	ACA4//ATCNGC18//ATBAG1//CAT3//ATSOS3//ATCHX20//ATGSR2//GAMMA-TIP2//ATRALF23//ATMT-1//AT3G11620//GAD2//ACO4//PIP2;6//ATGLR2.9
GO:0046173	polyol biosynthetic process	BP	0.0150309881165736	AT5G06980//AT4G26860//AKT2//AtSLP1//VTC4//NDF2//BBX25//BBX18//AtCCA1
GO:0019725	cellular homeostasis	BP	0.0150919989363671	ACA4//WCRKC2//HCF164//ATCNGC18//ATBAG1//GRXC2//CAT3//ATSOS3//ATCHX20//ACHT2//ACHT3//AT1G50950//ATGSR2//GAMMA-TIP2//ATRALF23//ATMT-1//AT3G11620//ATPDI6//AT1G52990//ATCDSP32//GAD2//ACO4//PIP2;6//ATGLR2.9
GO:0042742	defense response to bacterium	BP	0.0168932952329632	PLA//ACA4//ATP8//PSL5//AT5G57060//LPA2//ATERF-2//TAO1//AtCAF1b//CSA1//OBF4//ATMAPR3//AT3G48640//VTC2//ATPCAP1//APS1//GAMMA-TIP2//AT3G01830//HWI1//TGA7//ESP//AT2G04400//VAD1//ACO4//ALD1//PIP2;6//ATOEP16-1//ANTR1
GO:0090407	organophosphate biosynthetic process	BP	0.0173448646585423	ACA4//ATNUC-L1//AT5G60990//AtNMNAT//CHL//OLI7//AT5G14050//AT5G09960//AT5G06980//ATEIF2-A2//AT5G03430//ARATH;BSAS3;1//LPAT2//AT3G57490//ATPURM//AT3G45880//AT4G26860//ACP4//AKT2//AT4G11160//CLS//AT4G10280//AtSLP1//ATPURC//AT3G15080//PYRB//ETR2//GLTP3//RACK1C//AT3G26750//RPS10//VTC4//GLX2-2//AT3G01380//AT3G10530//DGD1//AT1G63810//HGPT//UREF//NDF2//BBX25//BBX18//AT2G21180//AT1G11880//ATECA3//AtCCA1//ATHPT//PGP1//NAPRT2//SCPL8
GO:0019722	calcium-mediated signaling	BP	0.0187816501561429	AtMYB70//ATCBL2//ATSOS3//ATCBL10//CLS//BLOS1//ACAM-4
GO:0009651	response to salt stress	BP	0.0211961532051913	ACA4//AT4G15545//ATP8//ANAC083//AT5G20700//AT-P5C1//XTH6//PROPEP2//ATBAG1//AtCEST//OLI7//ANAC092//ATSOS3//TUB8//ATVAMP713//AT5G06980//ALG10//ARATH;BSAS3;1//MPT2//ATBPM6//ACO1//IDH-I//ATCBL10//PIP1;5//ATPCAP1//ATGRP2//AtRbcX1//DFL2//ABCG11//AtCRT1a//ATGSR2//APS1//AT3G13410//GAMMA-TIP2//AT3G16850//AXR2//ATPK1//RCI2A//ATPDI6//COR413-TM1//ACO2//GAD2//AT1G59960//ADC1//BLH1//RAP2.7//ATGRP-3//PIP2;6//AtCCA1//AKR4C8//KCS11
GO:0006873	cellular ion homeostasis	BP	0.0226967229366338	ACA4//ATCNGC18//ATBAG1//CAT3//ATSOS3//ATCHX20//ATGSR2//GAMMA-TIP2//ATRALF23//ATMT-1//AT3G11620//GAD2//ACO4//PIP2;6//ATGLR2.9
GO:0072528	pyrimidine-containing compound biosynthe...	BP	0.0229283015535874	SQE1//ATNUC-L1//AT5G60990//OLI7//AT5G14050//ATEIF2-A2//AT3G57490//ATPURM//PYRB//RACK1C//RPS10//AT3G10530//AT1G63810//TH-1
GO:0009310	amine catabolic process	BP	0.0244303858080478	STR16//PYL1//CAT3//APAO//ATGSR2//APS1//AGP12//AT3G17100//GASA1//AT2G04400//ATGRP-3
GO:0042402	cellular biogenic amine catabolic proces...	BP	0.0244303858080478	STR16//PYL1//CAT3//APAO//ATGSR2//APS1//AGP12//AT3G17100//GASA1//AT2G04400//ATGRP-3
GO:0019751	polyol metabolic process	BP	0.0249110369658119	AT5G06980//AT4G33770//AT4G26860//AKT2//GDPDL2//AtSLP1//VTC4//AT1G71710//NDF2//BBX25//BBX18//AtCCA1
GO:0055082	cellular chemical homeostasis	BP	0.0264990553701106	ACA4//ATCNGC18//ATBAG1//CAT3//ATSOS3//ATCHX20//ATGSR2//GAMMA-TIP2//ATRALF23//ATMT-1//AT3G11620//GAD2//ACO4//PIP2;6//ATGLR2.9
GO:1901565	organonitrogen compound catabolic proces...	BP	0.0284108913465328	AT-P5C1//STR16//AT5G65480//PYL1//CAT3//APAO//PGRL1B//ATGSR2//PUT5//APS1//AGP12//AT3G17100//ATDPL1//AT1G77670//HO3//GASA1//ADC1//AT1G04350//AT2G04400//AT1G62250//ATGRP-3//ATHPT//SCPL8
GO:0009962	regulation of flavonoid biosynthetic pro...	BP	0.0288925671517284	ANAC083//AT5G20700//AT5G41400//ATCAD5//AT4G05590//AT3G27210//ATMYC2//GAD2//BLH1//AT2G30930
GO:0055065	metal ion homeostasis	BP	0.0288925671517284	ACA4//ATCNGC18//ATCBL2//ATSOS3//ATCHX20//ACO1//AtCRT1a//ATMT-1//ATECA3//ATGLR2.9
GO:0009108	coenzyme biosynthetic process	BP	0.0295991144414556	AT5G08415//AtNMNAT//AT5G03430//ATPURM//AT4G26860//MAT4//AT1G50000//SPS1//ATSK1//ATHPT//NAPRT2//SCPL8//EMB3147
GO:0055067	monovalent inorganic cation homeostasis	BP	0.029821784439105	ATCBL2//ATSOS3//ATCHX20//ATCHX17
GO:0040034	regulation of development, heterochronic	BP	0.0302054036439725	CDF1//GAS41//BHLH136//TCP2//MEE35
GO:0033993	response to lipid	BP	0.0310085590360745	AXR5//IAA14//ATP8//ANAC083//COPT5//XTH6//PROPEP2//AT2353//ATERF-2//PYL1//AtMYB24//BHLH136//ANAC092//AtCAF1b//OCP3//AT5G06980//ALDH10A9//AtbZIP67//CGA1//AKT2//PYR1//FBW2//DFL2//ABCG11//ATTBP2//AXR2//AT3G17100//RACK1C//IAA19//ATRALF23//RCI2A//ATPUB9//SAUR27//SAUR28//FBI1//COR413-TM1//AUF1//AT1G73980//ACO2//ATMYC2//AT1G11210//GASA1//IAA3//BLH1//RAP2.7//ACO4//ATGRP-3//AT2G14900//AtCCA1//MAKR4//HSI2"
GO:0001510	RNA methylation	BP	0.0320272115033402	AT5G09510//ATNUC-L1//OLI7//AT3G57490//AT3G53430//emb2474//EMB1706//STRS1//AT3G23620//RACK1C//AT3G16080//AT3G06700//AT3G04920//AT3G07750//AT1G30550//TIM13
GO:0006855	drug transmembrane transport	BP	0.0331533386297254	AT5G52450//AT5G44050//AT5G17700//AT4G23030//ALF5//AT1G71140//AT2G04050
GO:0009808	lignin metabolic process	BP	0.0331533386297254	CYP84A1//ATCAD5//AT1G66800//MAT4//CCOAMT//BGLU46//BGLU45
GO:0044281	small molecule metabolic process	BP	0.0342268491080134	PLA//ACA4//DHDPS2//AT4G16800//WCRKC2//ATP8//SQE1//AT5G19590//AT5G08415//AtGGPPS11//HCF164//AT5G17560//AT-P5C1//ATNUC-L1//STR16//AT5G60990//AtNMNAT//AT5G53770//AT2353//PYL1//CHL//OLI7//AT5G38750//CAT3//AtENODL17//AT5G14050//AT5G06980//CBB3//ATEIF2-A2//AT5G03430//AtKdtA//ARATH;BSAS3;1//AT3G57490//AGK2//AT3G56060//ATPURM//ATMAPR3//AT3G48640//PEX11B//LTPG2//ATPRP4//CGL//ACS8//ACO1//PSAT//IDH-I//AT4G34950//AT4G33770//ATBCA5//AT4G31410//ACHT2//VTC2//AT4G26860//ACP4//PIP1;5//AKT2//ATRP1//AT4G11160//ACS11//ACHT3//GDPDL2//AtSLP1//AT3G06200//FEI1//ATGSR2//BR6OX2//AT2G34160//APS1//ATPURC//AT3G15080//ATNCED6//GAMMA-TIP2//AtIDD11//PYRB//LAG1//ETR2//RACK1C//DAC//ATFAO3//MAT4//RPS10//AT3G02630//VTC4//RCI2A//GLX2-2//FOLB1//AT3G01830//AT3G10530//ATGSTU8//DGD1//AT3G11620//ADT2//ATDPL1//AT1G77670//LACS3//ATPDI6//AT1G63810//JAZ6//ACO2//CAT9//ACS10//ATCKX5//AT1G52990//HGPT//AT1G71710//AT1G01630//KCS1//AT1G50000//ATMYC2//ATCDSP32//GAD2//LACS2//AT1G75900//LEW1//NDF2//GASA1//SPS1//ESP//ADC1//BBX25//CRCK3//IMPL1//AT1G09310//BBX18//AT2G04400//ATSK1//BLH1//ATNAS3//ATECA3//TH-1//ACO4//AT2G20690//ATMAK10//ATGRP-3//ALD1//PIP2;6//ENOC//ANTR1//ATHXK2//AtCCA1//ACC4//BASS2//ATHPT//PGP1//AKN1//NAPRT2//AKR4C8//AT2G30930//SCPL8//EMB3147//KCS11
GO:0009683	indoleacetic acid metabolic process	BP	0.035143242970744	STR16//PYL1//CAT3//ARATH;BSAS3;1//ATMAPR3//APS1//GASA1//AT2G04400//ATGRP-3//SCPL8
GO:0009684	indoleacetic acid biosynthetic process	BP	0.035143242970744	STR16//PYL1//CAT3//ARATH;BSAS3;1//ATMAPR3//APS1//GASA1//AT2G04400//ATGRP-3//SCPL8
GO:0002213	defense response to insect	BP	0.0372439668378131	LACS3//ATMYC2//LACS2//ATMAK10
GO:0015893	drug transport	BP	0.0376447223323062	AT5G52450//AT5G44050//AT5G17700//AT4G23030//ALF5//AT1G71140//AT2G04050
GO:0006970	response to osmotic stress	BP	0.037926775419944	ACA4//AT4G15545//ATP8//ANAC083//AT5G20700//AT-P5C1//XTH6//PROPEP2//ATBAG1//AtCEST//OLI7//ANAC092//ATSOS3//TUB8//ATVAMP713//AT5G06980//ALG10//ARATH;BSAS3;1//MPT2//ATBPM6//CGL//ACO1//IDH-I//ATCBL10//PIP1;5//ATPCAP1//ATGRP2//AtRbcX1//DFL2//ABCG11//AtCRT1a//ATGSR2//APS1//AT3G13410//GAMMA-TIP2//AT3G16850//AXR2//ATPK1//RCI2A//ATPDI6//COR413-TM1//ACO2//GAD2//AT1G59960//ADC1//BLH1//RAP2.7//ATGRP-3//PIP2;6//AtCCA1//AKR4C8//KCS11
GO:0009110	vitamin biosynthetic process	BP	0.0379598926562827	SQE1//VTC2//VTC4//TH-1//AT2G20690//ATHPT
GO:0010583	response to cyclopentenone	BP	0.038661756568982	AXR5//IAA14//TUB8//AT4G38540//IAA29//ATCHX17//ATGSTU8//ATGSTU10//IAA3//AT2G41380//MAKR4
GO:0098542	defense response to other organism	BP	0.0390006460442886	PLA//ACA4//ATP8//CIPK25//PROPEP2//PSL5//AT5G62150//AT5G57060//ATCBL2//LPA2//AT5G50460//ATERF-2//TAO1//BEL1//AT5G39890//AtCAF1b//CSA1//OCP3//OBF4//BLH9//AGK2//ATMAPR3//AT3G48640//AT4G38540//PSAT//VTC2//ACP4//ATPCAP1//AtCRT1a//APS1//GAMMA-TIP2//AT3G01830//ATCAT3//LACS3//ATPDI6//HWI1//p24delta5//ATMYC2//AT1G76110//TGA7//AT1G52600//LACS2//AT1G65690//ESP//CRCK3//ATGLK1//AT2G04400//BLH1//VAD1//AT1G54610//AT1G61790//ACO4//AT2G20230//ATMAK10//ATGRP-3//ALD1//PIP2;6//ATOEP16-1//ANTR1
GO:0009416	response to light stimulus	BP	0.0392942472751124	PLA//AT1G44414//AT4G15545//AT5G19430//ATREV7//AT3G44820//AT2353//AT5G50460//BHLH136//PHYC//CSA1//CBB3//ATEIF2-A2//AtKdtA//APRR7//OHP//BBX19//CYP84A1//ATCBL10//IAA29//AT4G31410//AT4G29770//CSN6B//CGA1//ACP4//SPA2//AT4G07990//DFL2//RHB1A//AtCRT1a//FEI1//ATMSH1//ATNCED6//AT3G22104//GAMMA-TIP2//AT3G06210//AT3G16850//AXR2//AT3G25150//IAA19//DRT102//CDC48C//ADT2//FBI1//ATCAT3//AT1G52320//AT1G60970//ATPDI6//BBX16//SHW1//AT1G12180//PKS2//KCS1//QKY//AT1G50280//LEW1//GASA1//BBX25//BLH1//TPR3//ANTR1//AtCCA1//ATGLR2.9//ATHPT//ATNUDT23//KCS11
GO:0009746	response to hexose	BP	0.0404942706957806	AT4G15545//AT5G20700//ATBAG1//ARATH;BSAS3;1//PIP1;5//AT4G08790//ATGSR2//GAMMA-TIP2//APUM23//GAD2//PIP2;6//ATOEP16-1//ATHXK2
GO:0009220	pyrimidine ribonucleotide biosynthetic p...	BP	0.0414415480154956	ATNUC-L1//AT5G60990//OLI7//AT5G14050//ATEIF2-A2//AT3G57490//ATPURM//PYRB//RACK1C//RPS10//AT3G10530//AT1G63810
GO:0065008	regulation of biological quality	BP	0.0414983239177245	ACA4//TPR16//AtG3Pp4//WCRKC2//SQE1//HCF164//ATCNGC18//STR16//CLEL//AT5G60710//ATCBL2//ATBAG1//PYL1//ABIL4//GRXC2//CAT3//ATSOS3//AtENODL17//ATGRP-6//CBB3//BLH9//ARATH;BSAS3;1//ATCHX20//CP29//ATMAPR3//AtG3Pp1//ACO1//ATCBL10//ACHT2//ATCHX17//AKT2//ACHT3//AT1G50950//AtCRT1a//FEI1//ATGSR2//BR6OX2//APS1//GAMMA-TIP2//AXR2//ATRALF23//ATMT-1//AtCPA//AT3G11620//ATPDI6//PK3AT//AUF1//APUM23//ATCKX5//AT1G79600//AT1G52990//ATCDSP32//GAD2//QKY//SRD2//GASA1//AT2G04400//AT1G54610//ATECA3//ACO4//ATGRP-3//PIP2;6//ATGLR2.9//SCPL8//KCS11
GO:0007030	Golgi organization	BP	0.0417969971221758	ATP8//AT5G20700//ARATH;BSAS3;1//ACO1//AT4G33640//PIP1;5//ATPCAP1//ATGSR2//APS1//AT3G13410//GAMMA-TIP2//AT3G16850//RCI2A//ACO2//PIP2;6//KCS11
GO:0048527	lateral root development	BP	0.0420828952851766	AXR5//IAA14//ATP8//ALF4//ATWRKY75//CLEL//HAE//IAA19//LACS2//SRD2//IAA3
GO:0009813	flavonoid biosynthetic process	BP	0.0422320153455429	AT4G16770//ANAC083//AT5G20700//AT5G41400//BBX19//ATCAD5//AT4G05590//AtRbcX1//AT3G27210//ATMYC2//GAD2//BLH1//AT2G03310//AT2G30930
GO:0042493	response to drug	BP	0.0425178310238891	AT5G52450//AT5G44050//AT5G17700//AT4G23030//ALF5//AT1G71140//AT2G04050
GO:0009269	response to desiccation	BP	0.0425762267696459	XTH6//AXR2//COR413-TM1//ATMYC2//ATGRP-3
GO:0000413	protein peptidyl-prolyl isomerization	BP	0.0429701536496391	AT5G05420//AT3G55520//AT1G18170
GO:0010223	secondary shoot formation	BP	0.0429701536496391	BLH9//BBX16//AtD27
GO:0010346	shoot axis formation	BP	0.0429701536496391	BLH9//BBX16//AtD27
GO:0010101	post-embryonic root morphogenesis	BP	0.0435912657706188	IAA14//ATP8//ALF4//HAE//LACS2//SRD2
GO:0010102	lateral root morphogenesis	BP	0.0435912657706188	IAA14//ATP8//ALF4//HAE//LACS2//SRD2
GO:0006790	sulfur compound metabolic process	BP	0.0464395092966474	SQE1//AT5G08415//AtGGPPS11//HCF164//PYL1//CHL//AtENODL17//AT5G03430//ARATH;BSAS3;1//ATPRP4//CGL//AT4G34950//ATRP1//FEI1//APS1//GAMMA-TIP2//MAT4//VTC4//AT3G11620//ACO2//AT1G01630//ATMYC2//AT1G75900//ESP//IMPL1//AT1G09310//BLH1//TH-1//ATGRP-3//BASS2//ATHPT//AKN1//AT2G30930//SCPL8//KCS11
GO:0097305	response to alcohol	BP	0.0467916978761562	AXR5//IAA14//ATP8//ANAC083//COPT5//XTH6//PROPEP2//ATERF-2//PYL1//BHLH136//ANAC092//AtCAF1b//OCP3//AT5G06980//ALDH10A9//AtbZIP67//AKT2//PYR1//FBW2//DFL2//ABCG11//ATTBP2//AXR2//AT3G17100//RACK1C//IAA19//ATRALF23//RCI2A//ATPUB9//SAUR27//SAUR28//FBI1//COR413-TM1//AUF1//AT1G73980//ATMYC2//AT1G11210//GASA1//IAA3//BLH1//RAP2.7//ATGRP-3//AtCCA1//MAKR4//HSI2
GO:0007623	circadian rhythm	BP	0.0468878680834976	AT4G16146//APRR3//PHYC//APRR7//OHP//Fes1B//CP29//BBX19//AT4G34950//CGA1//GATA1//FBI1//AtCCA1
GO:0034284	response to monosaccharide	BP	0.0468878680834976	AT4G15545//AT5G20700//ATBAG1//ARATH;BSAS3;1//PIP1;5//AT4G08790//ATGSR2//GAMMA-TIP2//APUM23//GAD2//PIP2;6//ATOEP16-1//ATHXK2
GO:0048511	rhythmic process	BP	0.0468878680834976	AT4G16146//APRR3//PHYC//APRR7//OHP//Fes1B//CP29//BBX19//AT4G34950//CGA1//GATA1//FBI1//AtCCA1
GO:0019932	second-messenger-mediated signaling	BP	0.0477811419921498	AtMYB70//ATCBL2//ATSOS3//ATCBL10//CLS//BLOS1//ACAM-4
GO:0072527	pyrimidine-containing compound metabolic...	BP	0.0518015981331257	SQE1//ATNUC-L1//AT5G60990//OLI7//AT5G14050//ATEIF2-A2//AT3G57490//ATPURM//PYRB//RACK1C//RPS10//AT3G10530//AT1G63810//TH-1
GO:0009218	pyrimidine ribonucleotide metabolic proc...	BP	0.0520717586567737	ATNUC-L1//AT5G60990//OLI7//AT5G14050//ATEIF2-A2//AT3G57490//ATPURM//PYRB//RACK1C//RPS10//AT3G10530//AT1G63810
GO:0001763	morphogenesis of a branching structure	BP	0.0555634772450992	BLH9//BBX16//AtD27
GO:0043244	regulation of protein complex disassembl...	BP	0.0555634772450992	ATPCAP1//ATGRP2//AtCPA
GO:1901564	organonitrogen compound metabolic proces...	BP	0.0558607446420435	ACA4//DHDPS2//AT1G35190//SQE1//AT-P5C1//ATNUC-L1//STR16//AT5G65480//AT5G60990//AT5G60710//AtNMNAT//PYL1//CHL//OLI7//AT5G38750//CAT3//AT5G14050//APAO//ATEIF2-A2//AT5G03430//ARATH;BSAS3;1//AT3G57490//AGK2//ATPURM//ATMAPR3//PEX11B//ATPRP4//CGL//ACS8//PSAT//IDH-I//AT4G26310//CGA1//PGRL1B//ACS11//AT3G06200//ATGSR2//PUT5//APS1//AGP12//ATPURC//GAMMA-TIP2//PYRB//AT3G17100//LAG1//RACK1C//DAC//MAT4//RPS10//FOLB1//AT3G10530//DGD1//AT3G11620//ADT2//ATDPL1//AT1G77670//AT1G63810//HO3//ACO2//ACS10//ATCKX5//HGPT//AT1G01630//ATMYC2//GAD2//AT1G52600//NDF2//GASA1//ADC1//AT1G04350//AT1G09310//ATGLK1//AT2G04400//BLH1//ATNAS3//ATECA3//AT1G62250//TH-1//ATPCS2//AT2G20690//ATGRP-3//ALD1//ACC4//ATHPT//NAPRT2//AKR4C8//SCPL8//ATNUDT23
GO:0009064	glutamine family amino acid metabolic pr...	BP	0.0575881898415331	AT-P5C1//ATGSR2//AT1G77670//GAD2//ADC1
GO:0006576	cellular biogenic amine metabolic proces...	BP	0.058954452589319	STR16//PYL1//CAT3//APAO//ATGSR2//APS1//AGP12//AT3G17100//ATMYC2//GASA1//ADC1//AT2G04400//ATNAS3//ATGRP-3
GO:0006221	pyrimidine nucleotide biosynthetic proce...	BP	0.0601046394488629	ATNUC-L1//AT5G60990//OLI7//AT5G14050//ATEIF2-A2//AT3G57490//ATPURM//PYRB//RACK1C//RPS10//AT3G10530//AT1G63810
GO:0009451	RNA modification	BP	0.060157090465581	AT5G09510//ATNUC-L1//EMB3144//AT5G64380//AT5G56850//AT5G40060//OLI7//AtCAF1b//AT3G57490//AT3G53430//emb2474//EMB1706//STRS1//GDPDL2//AT3G23620//RACK1C//AT3G16080//AT3G06700//AT3G04920//AT3G07750//AT1G20410//ICE2//AT1G30550//AT1G76050//TIM13//AT2G29360
GO:0009628	response to abiotic stimulus	BP	0.0632262910791105	PLA//AtMYB70//ACA4//AT1G44414//AT4G15545//ATJ1//ATP8//SQE1//ATWRKY75//ANAC083//AT5G20700//AT5G19430//ATREV7//AT3G44820//AT-P5C1//XTH6//PROPEP2//CLEL//AtBGAL10//AT2353//ATBAG1//AT5G50460//AtCEST//BHLH136//AT5G39890//OLI7//ANAC092//PHYC//ATSOS3//TUB8//CSA1//ATVAMP713//OCP3//OBF4//AT5G06980//CBB3//ATEIF2-A2//AtKdtA//APRR7//OHP//ALG10//ARATH;BSAS3;1//CP29//MPT2//ALDH10A9//ATBPM6//BBX19//CGL//CYP84A1//ACO1//IDH-I//ATCBL10//IAA29//AT4G31410//AT4G29770//VTC2//CSN6B//CGA1//ACP4//PIP1;5//ATPCAP1//ATSS4//ATGRP2//SPA2//AT4G07990//AtRbcX1//DFL2//AT4G01210//RHB1A//ABCG11//AtCRT1a//FEI1//ATGSR2//ARLIM15//APS1//AT3G13410//AT3G27210//ATMSH1//ATNCED6//AT3G22104//GAMMA-TIP2//AT1G24620//AT3G06210//AT3G16850//AXR2//AT3G25150//IAA19//MAT4//VTC4//ATPK1//RCI2A//DGD1//DRT102//CDC48C//AT3G03550//ADT2//FBI1//ATCAT3//AT1G52320//AT1G60970//ATPDI6//COR413-TM1//ACAM-4//AT1G74450//BBX16//SHW1//ACO2//AT1G12180//AT1G26380//ICE2//ATSBT3.5//PKS2//KCS1//ATMYC2//ATCDSP32//GAD2//QKY//AT1G11210//AT1G50280//LEW1//AT1G59960//GASA1//ADC1//BBX25//BLH1//RAP2.7//TPR3//AT2G16660//ATGRP-3//HIS1-3//PIP2;6//ATOEP16-1//ARA-4//ANTR1//AtCCA1//ATGLR2.9//ATHPT//VEL2//AKR4C8//ATNUDT23//KCS11
GO:0009698	phenylpropanoid metabolic process	BP	0.0658436007918436	CYP84A1//ATCAD5//AT1G66800//ATGSR2//AGP12//AT3G17100//MAT4//CCOAMT//ACO2//KCS1//BGLU46//BGLU45//SCPL8
GO:1901605	alpha-amino acid metabolic process	BP	0.0659178326861205	DHDPS2//AT-P5C1//STR16//PYL1//CAT3//ARATH;BSAS3;1//ATPRP4//CGL//ACS8//PSAT//ACS11//ATGSR2//APS1//GAMMA-TIP2//MAT4//FOLB1//AT3G11620//ADT2//AT1G77670//ACO2//ACS10//AT1G01630//ATMYC2//GAD2//GASA1//ADC1//AT1G09310//AT2G04400//BLH1//ATGRP-3//ALD1//ACC4//ATHPT//SCPL8
GO:0048528	post-embryonic root development	BP	0.0670145695394138	AXR5//IAA14//ATP8//ALF4//ATWRKY75//CLEL//HAE//IAA19//LACS2//SRD2//IAA3