GOID TERM ONTOLOGY pValue Genes GO:0010411 xyloglucan metabolic process BP 0.00240966471862146 ATXT2//ATXYL1//ATXTH17 GO:0016126 sterol biosynthetic process BP 0.00261793587056865 AT5G21105//LRR1//CPH//FLA2//LTA2//PIP1;3//CKRC1//FLA7//GATL8//CYP710A2 GO:0006066 alcohol metabolic process BP 0.00309466525832062 AT5G21105//ABA1//AT5G51950//LRR1//CPH//AT5G01260//AT3G48460//FLA2//GDPDL5//LTA2//AtSS2//PIP1;3//CKRC1//CHI2//FLA7//GATL8//HY3//CYP710A2 GO:0016125 sterol metabolic process BP 0.00370927887307052 AT5G21105//LRR1//CPH//FLA2//LTA2//PIP1;3//CKRC1//FLA7//GATL8//CYP710A2 GO:0010087 phloem or xylem histogenesis BP 0.00432588775136915 ANAC083//AtMYB49//PIF6//CKRC1//ATRABG3B GO:0010017 red or far-red light signaling pathway BP 0.00446975307569701 PIF6//PIF5//FBI1//HY3 GO:0046165 alcohol biosynthetic process BP 0.00482169129451252 AT5G21105//ABA1//LRR1//CPH//AT5G01260//AT3G48460//FLA2//LTA2//AtSS2//PIP1;3//CKRC1//CHI2//FLA7//GATL8//CYP710A2 GO:0010817 regulation of hormone levels BP 0.00498625917175816 JK218//LRR1//CPH//PIF5//FLA2//ATXT2//GAMMA-TIP2//ACT2//LTA2//PIP1;3//AT1G76520//CKRC1//ATCKX5//HSL1//CHI2//FLA7 GO:0010089 xylem development BP 0.00520295607775497 ANAC083//AtMYB49//PIF6//ATRABG3B GO:0006694 steroid biosynthetic process BP 0.0054824036719361 AT5G21105//LRR1//CPH//FLA2//LTA2//PIP1;3//CKRC1//CHI2//FLA7//GATL8//CYP710A2 GO:0065008 regulation of biological quality BP 0.00551054329319861 ATPAP26//JK218//ATPDI2//ATCNGC4//ATBAG1//APRL7//LRR1//RIC4//CPH//PIF5//BGAL2//ACO1//CAT2//AT4G33040//ATPDI7//ATNPR4//FLA2//ATXT2//GAMMA-TIP2//ACT2//LTA2//PIP1;3//AT1G76520//CKRC1//ATCKX5//HSL1//CHI2//FLA7//HY3//AT2G25890 GO:0071489 cellular response to red or far red ligh... BP 0.00601252217573508 PIF6//PIF5//FBI1//HY3 GO:0019725 cellular homeostasis BP 0.0101836075826133 ATPDI2//ATCNGC4//ATBAG1//APRL7//PIF5//BGAL2//CAT2//AT4G33040//ATPDI7//GAMMA-TIP2//HY3 GO:0009825 multidimensional cell growth BP 0.0105653818555577 JK218//ATXT2//GAMMA-TIP2//ACT2//ATEXP5//HSL1 GO:0008202 steroid metabolic process BP 0.0110520920179492 AT5G21105//LRR1//CPH//FLA2//LTA2//PIP1;3//CKRC1//CHI2//FLA7//GATL8//CYP710A2 GO:0032940 secretion by cell BP 0.0113154994430835 SEC10//RIC4//ATEXO70G1//AT1G09330 GO:0016049 cell growth BP 0.0114835918643821 JK218//ATBAG1//RIC4//CYC2BAT//ATHB-16//ATCESA2//ATCPK5//AGD12//FLA2//ATXT2//KLCR2//GAMMA-TIP2//ACT2//ATEXP5//AT1G12500//AtPERK15//HSL1//CHI2//AT1G09330//AT2G07020//AT2G25800 GO:0046903 secretion BP 0.0126468507104742 SEC10//RIC4//ATEXO70G1//AT1G09330 GO:0071478 cellular response to radiation BP 0.0127381223380963 JK218//PIF6//PIF5//FBI1//HY3 GO:0071482 cellular response to light stimulus BP 0.0127381223380963 JK218//PIF6//PIF5//FBI1//HY3 GO:0016129 phytosteroid biosynthetic process BP 0.0130130911537435 LRR1//CPH//FLA2//LTA2//PIP1;3//CHI2//FLA7 GO:0016132 brassinosteroid biosynthetic process BP 0.0130130911537435 LRR1//CPH//FLA2//LTA2//PIP1;3//CHI2//FLA7 GO:0006084 acetyl-CoA metabolic process BP 0.0130425292729167 LRR1//CPH//FLA2//LTA2//PIP1;3//FLA7 GO:0009606 tropism BP 0.0130425292729167 JK218//PIF5//FBI1//CKRC1//ARG1//HY3 GO:0016051 carbohydrate biosynthetic process BP 0.0135052496941462 AtBAM3//JK218//ATPDI2//GAUT4//TUB8//AT3G48460//ATCESA2//TUB9//ATXT2//CARB//ACT11//PAC1//QQS//GAMMA-TIP2//ACT2//LSF1//AT1G72220//RGL//HSL1//GAI//GATL8//RGA//BAM6//ARAD1 GO:0002684 positive regulation of immune system pro... BP 0.0138299847723739 ATNPR4//AT4G19530//BOP2 GO:0050778 positive regulation of immune response BP 0.0138299847723739 ATNPR4//AT4G19530//BOP2 GO:0009832 plant-type cell wall biogenesis BP 0.0143367698483235 JK218//RIC4//ATCESA2//AT1G12500//HSL1//ATXYL1//FLA7//AT2G25800 GO:0016128 phytosteroid metabolic process BP 0.0154393634200123 LRR1//CPH//FLA2//LTA2//PIP1;3//CHI2//FLA7 GO:0016131 brassinosteroid metabolic process BP 0.0154393634200123 LRR1//CPH//FLA2//LTA2//PIP1;3//CHI2//FLA7 GO:0006637 acyl-CoA metabolic process BP 0.0169424285681036 LRR1//CPH//FLA2//LTA2//PIP1;3//FLA7 GO:0035383 thioester metabolic process BP 0.0169424285681036 LRR1//CPH//FLA2//LTA2//PIP1;3//FLA7 GO:0007018 microtubule-based movement BP 0.017225614775899 TUB8//KAC1//AT3G45850//TUB9 GO:0009888 tissue development BP 0.0181090528966253 ANAC083//JK218//AtMYB49//ATBAG1//AFB5//SPL2//RIC4//CYC2BAT//PIF6//CDC2//ATHB-16//ATCPK5//AT4G28780//FLA2//ATSPS4F//ATXT2//GAMMA-TIP2//ACT2//AT-P4H-2//CKRC1//HSL1//HYP7//FLA7//ABCG5//ATRABG3B//HY3//BOP2 GO:0009312 oligosaccharide biosynthetic process BP 0.0189533351954254 AtBAM3//RGL//GAI//RGA GO:0042546 cell wall biogenesis BP 0.0217097932173954 JK218//RIC4//ATCESA2//GALS3//ATVPS9A//AT1G12500//AT1G72220//HSL1//ATXYL1//ATFUT9//FLA7//AT2G25800 GO:0080147 root hair cell development BP 0.0217979190982159 JK218//ATBAG1//ATCPK5//FLA2//ATXT2//GAMMA-TIP2//ACT2//AT-P4H-2//HSL1 GO:0045454 cell redox homeostasis BP 0.0232722558326054 ATPDI2//APRL7//CAT2//AT4G33040//ATPDI7 GO:0006887 exocytosis BP 0.0239973318097861 SEC10//RIC4//ATEXO70G1 GO:0042592 homeostatic process BP 0.0242004101374404 ATPAP26//ATPDI2//ATCNGC4//ATBAG1//APRL7//PIF5//BGAL2//ACO1//CAT2//AT4G33040//ATPDI7//GAMMA-TIP2//HY3 GO:0000272 polysaccharide catabolic process BP 0.0247635787014665 AtBAM3//LSF1//ATXYL1//BAM6 GO:0005975 carbohydrate metabolic process BP 0.0250675847734564 AtBAM3//JK218//ATPDI2//GAUT4//TUB8//AT5G01260//BGAL2//AT3G48460//ATCESA2//ACO1//CAT2//TUB9//ATSPS4F//ATXT2//CARB//AtcwINV3//ACT11//PAC1//QQS//GDPDL5//AT3G21960//UVH3//GAMMA-TIP2//ACT2//ATVPS9A//RAP2.2//LSF1//AT1G12500//AT1G72220//RGL//HSL1//ATXYL1//GAI//PGK//ATXTH17//BGLU6//GATL8//RGA//BAM6//ARAD1//AT2G25800 GO:0046685 response to arsenic-containing substance BP 0.027025508831017 RAP2.2//PGK//HY3 GO:0009966 regulation of signal transduction BP 0.028491720479805 PIF5//AT3G44330//ATNPR4//RGL//GAI//RGA GO:0023051 regulation of signaling BP 0.0300303531595549 PIF5//AT3G44330//ATNPR4//RGL//GAI//RGA GO:0006970 response to osmotic stress BP 0.030693567198989 ANAC083//HHP1//ATPAP26//ATRD22//ABA1//AtMYB49//ATBAG1//TUB8//ATBZIP24//ACO1//FLA2//ABCG11//PAC1//GAMMA-TIP2//ACT2//PIP1;3//RGL//AT1G63010//GAI//AT1G61890//RGA//ANNAT4 GO:0016556 mRNA modification BP 0.0315394405413496 AT4G28780//AT4G19530//AT4G12830//AT3G10840 GO:0007602 phototransduction BP 0.0316632812372392 PIF5//FBI1 GO:0009583 detection of light stimulus BP 0.0316632812372392 PIF5//FBI1 GO:0009585 red, far-red light phototransduction BP 0.0316632812372392 PIF5//FBI1 GO:0009785 blue light signaling pathway BP 0.0316632812372392 JK218//FBI1 GO:0009806 lignan metabolic process BP 0.0316632812372392 AT4G11190//AT1G65870 GO:0009807 lignan biosynthetic process BP 0.0316632812372392 AT4G11190//AT1G65870 GO:0030522 intracellular receptor signaling pathway BP 0.0316632812372392 JK218//FBI1 GO:0009630 gravitropism BP 0.0320817217561875 PIF5//FBI1//CKRC1//ARG1//HY3 GO:0006073 cellular glucan metabolic process BP 0.0320966904067169 AtBAM3//ATPDI2//ATCESA2//CAT2//ATXT2//QQS//ACT2//LSF1//AT1G12500//ATXYL1//ATXTH17//BAM6//AT2G25800 GO:0044042 glucan metabolic process BP 0.0320966904067169 AtBAM3//ATPDI2//ATCESA2//CAT2//ATXT2//QQS//ACT2//LSF1//AT1G12500//ATXYL1//ATXTH17//BAM6//AT2G25800 GO:0010646 regulation of cell communication BP 0.0349696357616378 PIF5//AT3G44330//ATNPR4//RGL//GAI//RGA GO:0090558 plant epidermis development BP 0.0351668134553987 JK218//ATBAG1//AFB5//RIC4//CYC2BAT//CDC2//ATCPK5//AT4G28780//FLA2//ATXT2//GAMMA-TIP2//ACT2//AT-P4H-2//HSL1//HYP7//ABCG5//HY3 GO:0006468 protein phosphorylation BP 0.0363255271839718 JK218//CIPK20//AT5G41680//AT5G35960//LRR1//CYC2BAT//CIPK2//AT3G56050//CDC2//CRK4//ATCPK5//SD2-5//ARK3//AT4G19530//CRCK2//AT1G51810//TMK1//AtPERK15//HSL1//AT1G11410//CIPK17//AT2G25220//AT1G27190//HY3//AT2G07020 GO:0009970 cellular response to sulfate starvation BP 0.0379788008990754 CAT2//ATMGL GO:0050801 ion homeostasis BP 0.0402672229299998 ATPAP26//ATCNGC4//ATBAG1//PIF5//BGAL2//ACO1//GAMMA-TIP2//HY3 GO:0040007 growth BP 0.0405071172106848 JK218//ATBAG1//RIC4//CYC2BAT//ATHB-16//ATCESA2//ATCPK5//AGD12//FLA2//ATSPS4F//ATXT2//KLCR2//GAMMA-TIP2//ACT2//ATEXP5//AT1G12500//AtPERK15//HSL1//CHI2//FLA7//AT1G09330//AT2G07020//AT2G25800 GO:0048469 cell maturation BP 0.0405568903674527 JK218//ATBAG1//RIC4//ATCPK5//FLA2//ATXT2//GAMMA-TIP2//ACT2//AT-P4H-2//HSL1//HYP7 GO:0048764 trichoblast maturation BP 0.0405568903674527 JK218//ATBAG1//RIC4//ATCPK5//FLA2//ATXT2//GAMMA-TIP2//ACT2//AT-P4H-2//HSL1//HYP7 GO:0048765 root hair cell differentiation BP 0.0405568903674527 JK218//ATBAG1//RIC4//ATCPK5//FLA2//ATXT2//GAMMA-TIP2//ACT2//AT-P4H-2//HSL1//HYP7 GO:0048767 root hair elongation BP 0.0433062144002701 JK218//ATBAG1//ATCPK5//FLA2//ATXT2//GAMMA-TIP2//ACT2//HSL1 GO:0002218 activation of innate immune response BP 0.044727849790334 AT4G19530//BOP2 GO:0002253 activation of immune response BP 0.044727849790334 AT4G19530//BOP2 GO:0005983 starch catabolic process BP 0.044727849790334 AtBAM3//LSF1 GO:0009958 positive gravitropism BP 0.044727849790334 CKRC1//ARG1 GO:0048506 regulation of timing of meristematic pha... BP 0.044727849790334 SPL2//ATHB-16 GO:0048510 regulation of timing of transition from ... BP 0.044727849790334 SPL2//ATHB-16 GO:0009629 response to gravity BP 0.0450863806614224 PIF5//FBI1//CKRC1//ARG1//HY3 GO:0006833 water transport BP 0.0453825191002726 ATBAG1//ACO1//GAMMA-TIP2//ACT2//PIP1;3//HY3//RGA GO:0042044 fluid transport BP 0.0453825191002726 ATBAG1//ACO1//GAMMA-TIP2//ACT2//PIP1;3//HY3//RGA GO:0021700 developmental maturation BP 0.0454045827226433 JK218//ATBAG1//RIC4//ATCPK5//FLA2//ATXT2//GAMMA-TIP2//ACT2//AT-P4H-2//HSL1//HYP7 GO:0010374 stomatal complex development BP 0.0505958189607248 AFB5//CYC2BAT//CDC2//AT4G28780//ABCG5//HY3 GO:0009651 response to salt stress BP 0.0510644174394435 ANAC083//HHP1//ATRD22//AtMYB49//ATBAG1//TUB8//ATBZIP24//ACO1//FLA2//ABCG11//PAC1//GAMMA-TIP2//ACT2//PIP1;3//RGL//AT1G63010//GAI//AT1G61890//RGA//ANNAT4 GO:0006995 cellular response to nitrogen starvation BP 0.051880560965176 CDC2//CAT2 GO:0009628 response to abiotic stimulus BP 0.0521143361287594 AT1G44414//AtBAM3//ANAC083//HHP1//ATPAP26//ATRD22//ABA1//AGL69//JK218//ATMBD7//AtMYB49//ATBAG1//TUB8//PIF6//SDR1//PIF5//ATBZIP24//CDC2//ATHB-16//ACO1//CAT2//AT4G25260//AT4G19530//FLA2//ATSPS4F//ATXT2//ABCG11//PAC1//UVH3//GAMMA-TIP2//ACT2//AT3G17740//RAP2.2//AT3G02480//AT3G08570//AtSS2//FBI1//PIP1;3//RGL//CKRC1//ARG1//AT1G63010//HSL1//ATMGL//CHI2//ATOCT3//GAI//AT1G61890//HY3//RGA//cdf3//ANNAT4//AGP26 GO:0044723 single-organism carbohydrate metabolic p... BP 0.0531297800914784 AtBAM3//JK218//ATPDI2//GAUT4//TUB8//BGAL2//AT3G48460//ATCESA2//ACO1//TUB9//ATSPS4F//ATXT2//CARB//ACT11//PAC1//QQS//GDPDL5//UVH3//GAMMA-TIP2//ACT2//ATVPS9A//RAP2.2//LSF1//AT1G72220//RGL//HSL1//GAI//PGK//GATL8//RGA//BAM6//ARAD1 GO:0005976 polysaccharide metabolic process BP 0.0536651116591959 AtBAM3//JK218//ATPDI2//ATCESA2//CAT2//ATXT2//QQS//GAMMA-TIP2//ACT2//LSF1//AT1G12500//AT1G72220//HSL1//ATXYL1//ATXTH17//BAM6//ARAD1//AT2G25800 GO:0060560 developmental growth involved in morphog... BP 0.0547563465468601 JK218//ATBAG1//RIC4//CYC2BAT//ATCPK5//FLA2//ATXT2//KLCR2//GAMMA-TIP2//ACT2//ATEXP5//AtPERK15//HSL1//CHI2//AT1G09330//AT2G07020 GO:0009694 jasmonic acid metabolic process BP 0.0550753577313399 ATST2A//PIF5//LTA2//ATCKX5//PLAT2//AT1G61890 GO:0042445 hormone metabolic process BP 0.0556699901163148 LRR1//CPH//PIF5//FLA2//LTA2//PIP1;3//CKRC1//ATCKX5//CHI2//FLA7 GO:1901617 organic hydroxy compound biosynthetic pr... BP 0.0558696624463763 AT5G21105//ABA1//LRR1//CPH//AT5G01260//AT3G48460//FLA2//LTA2//AtSS2//PIP1;3//CKRC1//ATMLO2//CHI2//FLA7//GATL8//CYP710A2 GO:0055080 cation homeostasis BP 0.0569424138692619 ATCNGC4//ATBAG1//PIF5//BGAL2//ACO1//GAMMA-TIP2//HY3 GO:0009639 response to red or far red light BP 0.0588252117581911 ABA1//PIF6//PIF5//AT4G25260//ACT2//FBI1//CKRC1//GAI//HY3//RGA GO:0042446 hormone biosynthetic process BP 0.0593015859927717 LRR1//CPH//PIF5//FLA2//LTA2//PIP1;3//CKRC1//CHI2//FLA7 GO:0009251 glucan catabolic process BP 0.059408413520551 AtBAM3//LSF1 GO:0044247 cellular polysaccharide catabolic proces... BP 0.059408413520551 AtBAM3//LSF1 GO:0071483 cellular response to blue light BP 0.059408413520551 JK218//FBI1 GO:0080050 regulation of seed development BP 0.059408413520551 GAI//RGA GO:0030243 cellulose metabolic process BP 0.0597874944846414 ATPDI2//ATCESA2//ACT2//AT1G12500//BAM6//AT2G25800 GO:0010054 trichoblast differentiation BP 0.0622871734266128 JK218//ATBAG1//RIC4//ATCPK5//FLA2//ATXT2//GAMMA-TIP2//ACT2//AT-P4H-2//HSL1//HYP7 GO:0009826 unidimensional cell growth BP 0.0624199634214117 JK218//RIC4//CYC2BAT//ATXT2//KLCR2//GAMMA-TIP2//ACT2//ATEXP5//AtPERK15//HSL1//CHI2//AT1G09330//AT2G07020 GO:0030003 cellular cation homeostasis BP 0.0647329148100906 ATCNGC4//ATBAG1//PIF5//BGAL2//GAMMA-TIP2//HY3 GO:0043473 pigmentation BP 0.066687815782529 JK218//ATXT2//GAMMA-TIP2//ACT2//HSL1 GO:0043476 pigment accumulation BP 0.066687815782529 JK218//ATXT2//GAMMA-TIP2//ACT2//HSL1