GOID TERM ONTOLOGY pValue Genes GO:0016104 triterpenoid biosynthetic process BP 0.00129008776128675 04C11//ATSYTC//SQE1//AT1G31910//AACT2//CYP51 GO:0019742 pentacyclic triterpenoid metabolic proce... BP 0.00129008776128675 04C11//ATSYTC//SQE1//AT1G31910//AACT2//CYP51 GO:0019745 pentacyclic triterpenoid biosynthetic pr... BP 0.00129008776128675 04C11//ATSYTC//SQE1//AT1G31910//AACT2//CYP51 GO:0006722 triterpenoid metabolic process BP 0.00229235019963835 04C11//ATSYTC//SQE1//AT1G31910//AACT2//CYP51 GO:0009637 response to blue light BP 0.00500191662563311 FD-GOGAT//ARF7//ATPP7//CLB4//AT5G44680//ATGSL1//ADG2//ATPIRIN1//ATB//PGR5 GO:0010639 negative regulation of organelle organiz... BP 0.00701631196565345 ATDDM1//ATMSH2//AFH1//ATVLN1 GO:0051129 negative regulation of cellular componen... BP 0.00701631196565345 ATDDM1//ATMSH2//AFH1//ATVLN1 GO:0048646 anatomical structure formation involved ... BP 0.00814322245838335 AFO//ARF7//AT5G65000//HEN4//PXY//SDG18//AT5G11780//ATHB51//LAP3//AT3G57600//ATEXP16//AtCYP71//MIOX4//AT4G21820//AT4G08670//ATMSH2//SKP2A//EMB1968//sks18//AtRLP10//ASL18//BOP2//AT2G38160 GO:0010218 response to far red light BP 0.0106739519463265 AtMYB18//FD-GOGAT//CLB4//ATGSL1//ADG2//MED25//PGR5//ATPIN4 GO:0009834 plant-type secondary cell wall biogenesi... BP 0.0125486830500033 RWA1//ATMYB69//AtMYB85//AtMYB42//AtMYB20//IRX9 GO:0072525 pyridine-containing compound biosyntheti... BP 0.0127092423645572 AtPLR1//ATPPOX//ATSOS4//ATNADK-1 GO:0010608 posttranscriptional regulation of gene e... BP 0.0135898592789975 ATDDM1//CLB4//SDG18//ATAUX2-11//ATGSL12//AT3G49100//AT4G21820//AT1G75150//DDL//MEE35//ATMSH2//AT3G28460//AT3G02270//EMB2733//ATVLN1//AT2G25420//HDA13//AT2G19930 GO:0048518 positive regulation of biological proces... BP 0.0153006400496378 AtMYB18//FD-GOGAT//ARF7//AT5G27950//ATDDM1//CLB4//AtPLR1//ATNPR3//AT5G38180//ATTTG1//MEF18//LEP//ATHB51//AT3G55470//AtCYP71//CER9//ATMYB69//AtMYB85//EBS//MED25//ATB//SEC5A//AT1G66880//MOS2//DDL//MEE35//GTE01//ATMSH2//AT3G28460//AFH1//HEB2//AtULP1a//AtLa2//APG13//UMAMIT23//SKP2A//AT1G30455//MORF9//ACLA-1//CLPP6//KNATM//EVR//ATVLN1//AT2G25270//ATMC1//AML2//AT2G03420//AT2G05830//BOP2//AT2G19930//AGL6" GO:0048582 positive regulation of post-embryonic de... BP 0.0173131511133505 LEP//EBS//MED25//GTE01//ACLA-1//AGL6 GO:0016441 posttranscriptional gene silencing BP 0.0176839411849259 ATDDM1//SDG18//ATGSL12//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G28460//EMB2733//ATVLN1//AT2G25420//HDA13//AT2G19930 GO:0006342 chromatin silencing BP 0.0227103547507088 ATDDM1//SDG18//ATGSL12//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G10310//MOM//EMB2733//AT1G32930//AT1G23410//ATVLN1//AT2G25420 GO:0016246 RNA interference BP 0.0232142097803928 ATDDM1//SDG18//ATGSL12//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G28460//EMB2733//ATVLN1//AT2G25420//HDA13 GO:1901615 organic hydroxy compound metabolic proce... BP 0.024138167043595 PLA//04C11//FD-GOGAT//ATSYTC//SQE1//AT1G31910//SAG101//CLB4//AtcPT6//AtcPT5//GDPDL6//AtPLR1//CP31B//ATPPOX//ATMYB111//AACT2//ATNPR3//ATSOS4//AtMTM2//AT3G56060//AT3G48640//MIOX4//CYP707A1//ARCK1//hemf2//UP6//ATNCED5//AT1G66880//CXC750//AT2G32050//AT1G02410//SKIP16//AT2G01070//AT1G70985//AT1G21680//CYP51//AT2G21860//ATMC1//AT1G12050//ATCAMBP25 GO:0045814 negative regulation of gene expression, ... BP 0.0242348629810624 ATDDM1//SDG18//ATGSL12//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G10310//MOM//EMB2733//AT1G32930//AT1G23410//ATVLN1//AT2G25420 GO:0009911 positive regulation of flower developmen... BP 0.0256465627976841 EBS//MED25//ACLA-1//AGL6 GO:0051240 positive regulation of multicellular org... BP 0.0265779981523266 LEP//EBS//MED25//GTE01//ACLA-1//AGL6 GO:0051783 regulation of nuclear division BP 0.0269459305284811 ATMSH2//AML2//APC10 GO:0035194 posttranscriptional gene silencing by RN... BP 0.026996972578795 ATDDM1//SDG18//ATGSL12//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G28460//EMB2733//ATVLN1//AT2G25420//HDA13 GO:0018958 phenol-containing compound metabolic pro... BP 0.0294627332747451 PLA//FD-GOGAT//SAG101//CLB4//CP31B//ATNPR3//AtMTM2//AT3G48640//ARCK1//AT1G66880//CXC750//ATMC1//AT1G12050//ATCAMBP25 GO:0006813 potassium ion transport BP 0.0297663916803461 KAT1//GORK//KUP5//ATKUP9//KAB1 GO:0008361 regulation of cell size BP 0.0297663916803461 ATB//ACLA-1//anac036//AT1G11860//ATPIN4 GO:0048440 carpel development BP 0.031106399516426 AFO//FD-GOGAT//ARF8//ADT5//AGL1//AT3G57600//AGL16//AT3G46380//AtCYP71//MEE35//AT3G09160//BPE//AtRLP10//AT1G11860//AGL6 GO:0009566 fertilization BP 0.0312294275499974 VDD//NFD1//ATSBT3.18//UNE16 GO:0009567 double fertilization forming a zygote an... BP 0.0312294275499974 VDD//NFD1//ATSBT3.18//UNE16 GO:0072524 pyridine-containing compound metabolic p... BP 0.0314057878876938 CLB4//AtPLR1//CP31B//ATPPOX//ATSOS4//ATGSL1//PGL5//ADG2//LTO1//ATNADK-1//LPA19//AT1G64190//ENO2//AtFBA3 GO:0006346 methylation-dependent chromatin silencin... BP 0.0327678970478732 ATDDM1//SDG18//ATGSL12//AT4G21820//AT1G75150//ATMSH2//AT1G32930//ATVLN1//AT2G25420 GO:0009696 salicylic acid metabolic process BP 0.0336188242624761 PLA//FD-GOGAT//SAG101//CLB4//CP31B//ATNPR3//AtMTM2//AT3G48640//ARCK1//AT1G66880//CXC750//ATMC1//ATCAMBP25 GO:0043414 macromolecule methylation BP 0.0337898148591965 ATDDM1//AT5G56670//SDG18//AT5G15200//ATGSL12//AtCYP71//NFD1//AT4G21820//AT4G12600//DDL//AT3G28900//AT2G41050//ATMSH2//AT3G28460//ATL5//AT3G16080//AtULP1a//AT3G09500//AT3G10310//HTA9//EMB2733//AT1G32930//FDM5//EMB1968//AT1G23410//ATVLN1//AT2G25420//HDA13 GO:0010155 regulation of proton transport BP 0.0342976676013873 FD-GOGAT//CLB4//AT5G44680//ATGSL1//FUG1//PGR5 GO:0051094 positive regulation of developmental pro... BP 0.0342976676013873 LEP//EBS//MED25//GTE01//ACLA-1//AGL6 GO:0071483 cellular response to blue light BP 0.0351968908670598 ARF7//ATPP7//ATPIRIN1 GO:0006869 lipid transport BP 0.0354595939662006 ATRMR1//AT5G52160//AT5G38180//AT4G25710//AT4G12500//AIR1//AT4G08670//AT3G25610//ALIS1//ATTIM23-1//LTP GO:1901617 organic hydroxy compound biosynthetic pr... BP 0.0370325183073712 PLA//04C11//FD-GOGAT//ATSYTC//SQE1//AT1G31910//SAG101//CLB4//AtcPT6//AtcPT5//AtPLR1//CP31B//ATPPOX//ATMYB111//AACT2//ATNPR3//ATSOS4//AtMTM2//AT3G48640//ARCK1//UP6//ATNCED5//AT1G66880//CXC750//AT2G32050//AT2G01070//AT1G70985//CYP51//AT2G21860//ATMC1 GO:0032259 methylation BP 0.0393748954449746 ATDDM1//AT5G56670//SDG18//AT5G15200//ATGSL12//AtCYP71//NFD1//AT4G21820//AT4G12600//DDL//AT3G28900//AT2G41050//ATMSH2//AT3G28460//ATL5//AT3G16080//AtULP1a//AT3G09500//AT3G10310//HTA9//EMB2733//AT1G32930//FDM5//EMB1968//AT1G23410//ATVLN1//AT2G25420//HDA13 GO:0009697 salicylic acid biosynthetic process BP 0.0410138048323045 PLA//FD-GOGAT//SAG101//CLB4//CP31B//ATNPR3//AtMTM2//AT3G48640//ARCK1//AT1G66880//CXC750//ATMC1 GO:0006007 glucose catabolic process BP 0.0436247607656998 AT5G19760//ATGT18//ACT7//KUP5//ATB//iPGAM2//AT1G27090//AtFBA3 GO:0051567 histone H3-K9 methylation BP 0.0437672921029621 ATDDM1//SDG18//ATGSL12//AtCYP71//NFD1//AT4G21820//ATMSH2//AT3G10310//AT1G32930//AT1G23410//ATVLN1//AT2G25420 GO:0061647 histone H3-K9 modification BP 0.0437672921029621 ATDDM1//SDG18//ATGSL12//AtCYP71//NFD1//AT4G21820//ATMSH2//AT3G10310//AT1G32930//AT1G23410//ATVLN1//AT2G25420 GO:0048467 gynoecium development BP 0.0439461211989081 AFO//FD-GOGAT//ARF8//ADT5//AGL1//AT3G57600//AGL16//AT3G46380//AtCYP71//MEE35//AT3G09160//BPE//AtRLP10//AT1G11860//AGL6 GO:0010114 response to red light BP 0.044228560855291 FD-GOGAT//CLB4//ATGSL1//ADG2//MED25//ANAC013//PGR5 GO:0048584 positive regulation of response to stimu... BP 0.044228560855291 ATNPR3//MED25//ATB//MOS2//HEB2//EVR//BOP2 GO:2000243 positive regulation of reproductive proc... BP 0.0443735521103087 EBS//MED25//ACLA-1//AGL6 GO:0006085 acetyl-CoA biosynthetic process BP 0.0445904171675285 AACT2//ACLA-1//ACLA-3 GO:0009108 coenzyme biosynthetic process BP 0.0469270825040692 CLB4//AtPLR1//AACT2//AtNUDT11//ATSOS4//AtSAM2//AT3G12290//ATNADK-1//PHYLLO//ACLA-1//ACLA-3 GO:0044763 single-organism cellular process BP 0.0473251751200176 NAD9//PLA//ATDUF3//AFO//AtMYB18//04C11//RALFL32//RPP4//ATINT4//AT4G14980//FD-GOGAT//ATSYTC//ALDH3H1//ATPRR1//AT-HSFB4//SQE1//AAC2//AtTRS120//AT5G19760//ARF7//AT5G20500//AT5G19940//CEN2//AT1G31910//AtFAR6//AT5G15870//ATCNGC18//SAG101//AT5G35170//AT5G27950//tny//ATDDM1//ATRMR1//AT5G65000//ATPP7//ATGT18//CLB4//AtZIP2//AT5G59250//COPT1//AtcPT6//AtcPT5//ATEXO70B1//AT5G58480//GDPDL6//AT5G58120//AT5G57815//ABI2//AT5G53850//AtPLR1//SHOC1//APC2//ATEXO70F1//CP31B//ATPPOX//AACT2//SLY2//UBP21//KAT1//RWA1//AtNUDT11//ATNPR3//AT5G45210//AT5G44680//SDG18//ATAUX2-11//KCS20//AT5G43040//AT5G41540//AtSGF29b//GRF3//AT5G38750//AT5G38340//EMB2656//ATSOS4//GORK//ATGSL1//PGL5//ATTTG1//DCR//AT5G22840//ADT5//ADG2//MEF18//ATRAD4//AT5G14700//AT5G13760//ATGSL12//AT5G11780//MSL2//ACT7//CI51//AtMTM2//ATCAT6//DPA//AtmSFC1//ATCBG//AT3G62960//AT3G61080//AT3G59940//SPL12//LAP3//AT3G59670//ATPIRIN1//GIS//AGL16//AT3G55470//ATEXP16//AT3G54930//AT3G54400//ATBZIP24//AT3G49100//ATMAPR3//AT3G48640//AT3G47570//UGT76E12//AT3G46220//AT3G46150//AtCYP71//AT4G39690//CGL//XTH7//LTO1//CER9//KUP5//NFD1//AR2//AT4G27120//AT4G26910//MIOX4//AT4G25830//AT4G21820//ATBRCA1//ATGA2OX8//AT4G20760//EMB1895//ATKUP9//ARA-7//CYP707A1//ALMT12//AIR1//AT4G12600//ARCK1//AT4G11730//AT4G11030//ATGIP1//APRL6//AT4G08670//ATRMA1//hemf2//AtSAM2//AtWRKY22//MED25//ATB//UP6//AT4G10300//AT1G34010//AT1G07270//ATSYP81//ATNCED5//HPS4//AT1G58230//ATHCHIB//ALDH22A1//AT3G12290//AT3G12210//SEC5A//AT1G66880//MOS2//CXC750//AT1G75150//ATGLR3.3//PHS1//ATNADK-1//BTS//DDL//APUM5//MEE35//GTE01//AT2G41050//AT2G43280//AT2G32050//AT3G12860//ALIS1//ATMSH2//AT3G28460//ATL5//AFH1//ATVPS9A//AT3G19400//RNR2//RLK902//JAI3//AT3G26870//SULTR3;4//FAB1B//AT3G17280//HEB2//AT3G22440//ATPMEI2//AtULP1a//AT3G07900//iPGAM2//ATSYP71//AT3G11830//FOLB1//AT3G06340//ATCHIP//AT3G10310//ATMYB57//CYP86A4//AT1G02410//AT1G28160//MAP65-8//PHYLLO//AtLPLAT2//TAPX//ATRECQ4B//AT1G68440//AT1G80620//AtRLP14//AT1G73700//AtLa2//AtRLP15//AT1G80580//APG13//CER8//AT2G43530//ZIP11//AT2G43670//MOM//ATTIM23-1//EMB2733//SCD1//AT1G06830//SKP2A//SKIP16//MAP3KA//ATUPS5//AT1G07520//ATH4//ATPDI10//ANAC013//AT1G32930//AT1G48570//LPA19//PLIM2b//AtMGT2//MORF9//ACLA-1//ATERF3//FDM5//AT1G64510//HCS2//BPE//AT1G70985//AT1G64190//FUG1//EMB1968//AT1G21680//ASP4//ATSYP51//CYP51//CLPP6//CDI//KNATM//ATKS//AT-E1//RGLG4//sks18//AT1G23410//MCCA//GUN1//DOR//AGT//EVR//ATVLN1//anac036//AHK4//AT2G25270//AT2G21300//ATCNGC12//AT2G36410//ENO2//AT2G21210//HEMA3//ATMC1//AtRLP10//AT1G60320//IAA10//AT1G11860//AT1G12050//KAB1//ATECI1//AT1G69990//AT1G67300//AT1G55550//FMO//AT2G28390//AML2//APC10//IRX9//PGR5//AT2G25420//AT2G03420//AtFBA3//AT2G05830//ATCXXS2//CHR8//PVA12//ATATG8E//CYP94C1//HDA13//ENOC//ATGSTU3//ATPIN4//BOP2//AT2G07020//AT2G19930//ATNADP-ME1//ATSUC3//AtGLDP2//ATCAMBP25//CID1//AT2G38160//AT2G02620//ATCS//AT2G44420//ATL9//ArRABA1h//AtRLP22//AUG2//SCAB1 GO:0010558 negative regulation of macromolecule bio... BP 0.0508608527241309 ATDDM1//SDG18//ATGSL12//AT5G13240//AT3G49100//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G10310//MOM//EMB2733//SKP2A//AT1G32930//CSTF64//ATERF3//AT1G23410//ATVLN1//APC10//AT2G25420 GO:2000113 negative regulation of cellular macromol... BP 0.0508608527241309 ATDDM1//SDG18//ATGSL12//AT5G13240//AT3G49100//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G10310//MOM//EMB2733//SKP2A//AT1G32930//CSTF64//ATERF3//AT1G23410//ATVLN1//APC10//AT2G25420 GO:0016458 gene silencing BP 0.0510142887589361 ATDDM1//SDG18//ATGSL12//AtCYP71//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G28460//AT3G10310//MOM//EMB2733//AT1G32930//FDM5//AT1G23410//ATVLN1//AT2G25420//HDA13//AT2G19930 GO:0019320 hexose catabolic process BP 0.0517285857510447 AT5G19760//ATGT18//ACT7//KUP5//ATB//iPGAM2//AT1G27090//AtFBA3 GO:0009886 post-embryonic morphogenesis BP 0.0525752684876686 AFO//FD-GOGAT//ARF7//HEN4//PXY//SDG18//ARF8//AT5G11780//AGL1//AT3G57600//AT3G46380//AtCYP71//AT4G21820//AIR1//AT4G11100//ATMSH2//AT3G04760//AT3G09160//CER8//SKP2A//BPE//EMB1968//anac036//AtRLP10//AT2G03420//ASL18//BOP2//AT2G38160 GO:0035384 thioester biosynthetic process BP 0.0550902132005478 AACT2//ACLA-1//ACLA-3 GO:0071616 acyl-CoA biosynthetic process BP 0.0550902132005478 AACT2//ACLA-1//ACLA-3 GO:0006739 NADP metabolic process BP 0.0560580747666907 CLB4//AtPLR1//CP31B//ATGSL1//PGL5//ADG2//LTO1//ATNADK-1//LPA19//AT1G64190//ENO2//AtFBA3 GO:0009414 response to water deprivation BP 0.0575689789341475 ALDH3H1//SQE1//ATMYB96//ABI2//GORK//ANN7//CER9//ARCK1//ATNCED5//PHS1//ATCHIP//ERD10//ANAC013//ATERF3//DOR//AHK4//PGR5//CYP94C1//ANN3//ATCAMBP25//CID1 GO:0006767 water-soluble vitamin metabolic process BP 0.0581193169021358 SQE1//AtPLR1//ATPPOX//ATSOS4//MIOX4 GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.0581193169021358 SQE1//AtPLR1//ATPPOX//ATSOS4//MIOX4 GO:0042537 benzene-containing compound metabolic pr... BP 0.0592592196687116 PLA//FD-GOGAT//SAG101//CLB4//CP31B//ATNPR3//AtMTM2//AT3G48640//ARCK1//AT1G66880//CXC750//ATMC1//PVA12//ATCAMBP25 GO:0046189 phenol-containing compound biosynthetic ... BP 0.0594594223463617 PLA//FD-GOGAT//SAG101//CLB4//CP31B//ATNPR3//AtMTM2//AT3G48640//ARCK1//AT1G66880//CXC750//ATMC1 GO:0046365 monosaccharide catabolic process BP 0.0607427534490471 AT5G19760//ATGT18//ACT7//KUP5//ATB//iPGAM2//AT1G27090//AtFBA3 GO:0051186 cofactor metabolic process BP 0.0610857835937529 ATDUF3//CLB4//AtPLR1//CP31B//AACT2//AtNUDT11//ATSOS4//ATGSL1//PGL5//ADG2//AT3G61080//LTO1//hemf2//AtSAM2//AT3G12290//ATNADK-1//FOLB1//AT-SO//PHYLLO//LPA19//ACLA-1//AT2G01070//AT1G64190//ENO2//AT2G21210//HEMA3//AT1G12050//ACLA-3//AtFBA3 GO:0035670 plant-type ovary development BP 0.0614790282003856 AFO//FD-GOGAT//ARF8//AGL1//AGL16//MEE35//BPE//AtRLP10//AT1G11860//AGL6 GO:0048481 ovule development BP 0.0614790282003856 AFO//FD-GOGAT//ARF8//AGL1//AGL16//MEE35//BPE//AtRLP10//AT1G11860//AGL6 GO:0006081 cellular aldehyde metabolic process BP 0.0641103782442811 ALDH3H1//CLB4//AtPLR1//CP31B//ATPPOX//ATSOS4//ATGSL1//PGL5//ADG2//LTO1//hemf2//AT4G10300//AT1G02410//SKIP16//LPA19//AT1G64190//FUG1//AT1G21680//CLPP6//ENO2//AT2G03420//AtFBA3 GO:0031327 negative regulation of cellular biosynth... BP 0.0648768100155962 ATDDM1//SDG18//ATGSL12//AT5G13240//AT3G49100//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G10310//MOM//EMB2733//SKP2A//AT1G32930//CSTF64//ATERF3//AT1G23410//ATVLN1//APC10//AT2G25420 GO:0048437 floral organ development BP 0.0651677842910451 AFO//FD-GOGAT//HEN4//SDG18//ARF8//ADT5//AT5G11780//ATHB51//AT3G62960//AGL1//AT3G57600//AGL16//AT3G46380//AtCYP71//AT4G21820//ATB//MEE35//ATMSH2//ATMYB57//AT3G09160//AT1G06830//BPE//EMB1968//EVR//AtRLP10//AT1G11860//BOP2//AT2G38160//AGL6 GO:0048444 floral organ morphogenesis BP 0.0657026954737329 AFO//HEN4//SDG18//AT5G11780//AT3G57600//AT3G46380//AtCYP71//AT4G21820//ATMSH2//AT3G09160//BPE//EMB1968//AtRLP10//AT2G38160 GO:0048563 post-embryonic organ morphogenesis BP 0.0657026954737329 AFO//HEN4//SDG18//AT5G11780//AT3G57600//AT3G46380//AtCYP71//AT4G21820//ATMSH2//AT3G09160//BPE//EMB1968//AtRLP10//AT2G38160 GO:0048569 post-embryonic organ development BP 0.066046077287047 AFO//FD-GOGAT//ARF7//HEN4//SDG18//ARF8//ADT5//AT5G11780//AtMTM2//ATHB51//AT3G62960//AGL1//AT3G57600//AGL16//AT3G46380//AtCYP71//AT4G21820//AIR1//ATB//MEE35//ATMSH2//ATVPS9A//ATMYB57//AT3G09160//AT1G06830//SKP2A//BPE//EMB1968//EVR//AtRLP10//AT1G11860//ASL18//BOP2//AT2G38160//AGL6 GO:0048522 positive regulation of cellular process BP 0.0662912087711848 AtMYB18//ARF7//ATDDM1//CLB4//AT5G38180//MEF18//ATHB51//AtCYP71//ATMYB69//AtMYB85//MED25//ATB//SEC5A//DDL//MEE35//GTE01//ATMSH2//AT3G28460//AFH1//HEB2//AtULP1a//AtLa2//APG13//UMAMIT23//SKP2A//AT1G30455//MORF9//CLPP6//KNATM//EVR//ATVLN1//AT2G25270//ATMC1//AML2//AT2G03420//AT2G19930 GO:0009415 response to water BP 0.0674493059219127 ALDH3H1//SQE1//ATMYB96//ABI2//GORK//ANN7//CER9//ARCK1//ATNCED5//PHS1//ATCHIP//ERD10//ANAC013//ATERF3//DOR//AHK4//PGR5//CYP94C1//ANN3//ATCAMBP25//CID1 GO:0016568 chromatin modification BP 0.0680976863644104 ATDDM1//SDG18//AtSGF29b//ATGSL12//AT5G11780//AtCYP71//NFD1//AT4G21820//AT1G75150//DDL//AT2G41050//ATMSH2//AtULP1a//AT3G10310//HTA9//AT1G32930//EMB1968//AT1G23410//ATVLN1//AT2G25270//AtRLP10//AT2G25420//AT2G38160 GO:0001510 RNA methylation BP 0.0684753431833127 AT5G56670//AT5G15200//NFD1//AT4G12600//AT3G28900//AT3G28460//ATL5//AT3G16080//AT3G09500//EMB1968//HDA13 GO:0009890 negative regulation of biosynthetic proc... BP 0.0700911304573031 ATDDM1//SDG18//ATGSL12//AT5G13240//AT3G49100//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G10310//MOM//EMB2733//SKP2A//AT1G32930//CSTF64//ATERF3//AT1G23410//ATVLN1//APC10//AT2G25420 GO:0009410 response to xenobiotic stimulus BP 0.0719290874324037 ATNPR3//MEF18//ATBZIP24//GGT3//AtLa2//AT2G19930 GO:0048645 organ formation BP 0.0725970088483788 AFO//ARF7//HEN4//SDG18//AT5G11780//AT3G57600//AtCYP71//AT4G21820//ATMSH2//SKP2A//EMB1968//AtRLP10//ASL18//AT2G38160 GO:0006325 chromatin organization BP 0.0732524767636005 AFO//ATDDM1//SDG18//AtSGF29b//ATGSL12//AT5G11780//AtCYP71//NFD1//EBS//AT4G21820//HTA4//AT1G75150//DDL//AT2G41050//ATMSH2//AtULP1a//AT3G10310//HTA9//AT1G17520//AT1G32930//EMB1968//AT1G23410//ATVLN1//AT2G25270//AtRLP10//AT2G25420//AT2G34450//AT2G38160 GO:0046496 nicotinamide nucleotide metabolic proces... BP 0.0744242997432659 CLB4//AtPLR1//CP31B//ATGSL1//PGL5//ADG2//LTO1//ATNADK-1//LPA19//AT1G64190//ENO2//AtFBA3 GO:0031048 chromatin silencing by small RNA BP 0.0760060134692266 ATDDM1//SDG18//ATGSL12//AT4G21820//ATMSH2//AT1G32930//ATVLN1//AT2G25420 GO:0045934 negative regulation of nucleobase-contai... BP 0.0766774540528669 ATDDM1//SDG18//ATGSL12//AT5G13240//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G10310//MOM//EMB2733//SKP2A//AT1G32930//CSTF64//ATERF3//AT1G23410//ATVLN1//APC10//AT2G25420 GO:0048831 regulation of shoot system development BP 0.0766774540528669 AFO//SLY2//SDG18//ARF8//AT5G11780//AGL1//AtCYP71//EBS//MED25//DDL//ATMSH2//HTA9//ACLA-1//EMB1968//EVR//AHK4//AtRLP10//AT2G19930//AT2G38160//AGL6 GO:0044272 sulfur compound biosynthetic process BP 0.0780969952437366 SQE1//AT5G19940//CLB4//AT5G53850//AtPLR1//ATPPOX//AACT2//ATGSL1//AT5G13760//AT3G54400//CGL//XTH7//LTO1//KUP5//AtSAM2//ALDH22A1//AT3G12290//AT3G19400//ACLA-1//FDM5//CYP51//AT1G11860//ACLA-3//FMO//AT2G05830 GO:0016569 covalent chromatin modification BP 0.0784381172400751 ATDDM1//SDG18//AtSGF29b//ATGSL12//AT5G11780//AtCYP71//NFD1//AT4G21820//AT1G75150//DDL//AT2G41050//ATMSH2//AtULP1a//AT3G10310//AT1G32930//EMB1968//AT1G23410//ATVLN1//AtRLP10//AT2G25420//AT2G38160 GO:0031349 positive regulation of defense response BP 0.078528350946218 MED25//MOS2//EVR//BOP2 GO:0072348 sulfur compound transport BP 0.0792092827812718 GTR1//SULTR3;4//AHK4 GO:0006732 coenzyme metabolic process BP 0.0799661535200094 CLB4//AtPLR1//CP31B//AACT2//AtNUDT11//ATSOS4//ATGSL1//PGL5//ADG2//LTO1//AtSAM2//AT3G12290//ATNADK-1//FOLB1//PHYLLO//LPA19//ACLA-1//AT2G01070//AT1G64190//ENO2//ACLA-3//AtFBA3 GO:0015980 energy derivation by oxidation of organi... BP 0.0806870868024288 NAD9//AT5G19760//AT5G35170//ADG2//CI51//AT4G26910//AT4G25830//HCS2//ATCS GO:0019438 aromatic compound biosynthetic process BP 0.0812873324436968 PLA//ATDUF3//AtMYB18//FD-GOGAT//ATPRR1//AT-HSFB4//SQE1//ARF7//AT1G16690//SAG101//AT5G35170//tny//AT5G66980//ATDDM1//ATMYB96//CLB4//AtPLR1//CP31B//ATPPOX//ATMYB111//UBP21//AtNUDT11//ATNPR3//SDG18//RLT2//ATAUX2-11//AT5G38180//ATSOS4//ARF8//ADT5//AT5G18450//VDD//AT5G14700//LEP//ATGSL12//AT5G13240//AtMTM2//ATHB51//AT5G02460//DPA//SPL12//AT3G59670//AGL1//GIS//AT3G57600//AGL16//ATBZIP24//ATMAPR3//AT3G48640//AtCYP71//AtGRF2//CER9//ATMYB69//NFD1//AtC3H49//AtMYB85//EBS//AT4G21820//AtMYB42//AT4G12600//ARCK1//AT4G11730//hemf2//AT4G03170//AtSAM2//AtWRKY22//MED25//AT3G12290//AT1G35890//AT1G66880//CXC750//AT1G75150//ATNADK-1//DDL//MEE35//GTE01//ATMSH2//AT3G28460//ATL5//AtMYB110//RNR2//AtULP1a//AT3G06410//AT3G10310//ATMYB57//AT1G28160//AtMYB20//NRPA2//AT1G80580//APG13//UMAMIT23//MOM//EMB2733//SKP2A//ANAC007//ANAC013//AT1G32930//AT1G48570//CSTF64//TAF4//BEE1//AT1G30455//MORF9//ACLA-1//SCL-3//ATERF3//BPE//FUG1//EMB1968//CLPP6//KNATM//TAF6B//AT1G23410//AT1G10610//ATVLN1//anac036//AtMYB100//AT2G21210//HEMA3//ATMC1//IAA10//AT1G11950//AT1G05290//AT1G70000//AT2G25420//AT2G03420//PDE319//HDA13//AT2G22760//AT2G03130//AtWRKY12//AGL6 GO:0019252 starch biosynthetic process BP 0.0813061178640199 CLB4//AtPLR1//CP31B//LTO1//AT4G20760//AT4G10300//PHS1//AT2G43530//ACLA-1//AT2G03420//AT2G05830 GO:0048449 floral organ formation BP 0.0813061178640199 AFO//HEN4//SDG18//AT5G11780//AT3G57600//AtCYP71//AT4G21820//ATMSH2//EMB1968//AtRLP10//AT2G38160 GO:0044087 regulation of cellular component biogene... BP 0.0815619888460962 AtCYP71//ATMYB69//AtMYB85//AtMYB42//SEC5A//AFH1//AtMYB20//ATVLN1 GO:0051172 negative regulation of nitrogen compound... BP 0.0826942407188311 ATDDM1//SDG18//ATGSL12//AT5G13240//NFD1//AT4G21820//AT1G75150//DDL//ATMSH2//AT3G10310//MOM//EMB2733//SKP2A//AT1G32930//CSTF64//ATERF3//AT1G23410//ATVLN1//APC10//AT2G25420 GO:0019362 pyridine nucleotide metabolic process BP 0.0827368919956981 CLB4//AtPLR1//CP31B//ATGSL1//PGL5//ADG2//LTO1//ATNADK-1//LPA19//AT1G64190//ENO2//AtFBA3 GO:0006355 regulation of transcription, DNA-templat... BP 0.0831868603964491 AtMYB18//AT-HSFB4//ARF7//AT1G16690//tny//AT5G66980//ATDDM1//ATMYB96//CLB4//ATMYB111//SDG18//RLT2//ATAUX2-11//AT5G38180//ARF8//AT5G18450//VDD//LEP//ATGSL12//AT5G13240//ATHB51//AT5G02460//DPA//SPL12//AGL1//GIS//AT3G57600//AGL16//ATBZIP24//AtCYP71//AtGRF2//ATMYB69//NFD1//AtC3H49//AtMYB85//EBS//AT4G21820//AtMYB42//AT4G03170//AtWRKY22//MED25//AT1G35890//AT1G75150//DDL//MEE35//GTE01//ATMSH2//AT3G28460//AtMYB110//AtULP1a//AT3G06410//AT3G10310//ATMYB57//AT1G28160//AtMYB20//AT1G80580//APG13//UMAMIT23//MOM//EMB2733//SKP2A//ANAC007//ANAC013//AT1G32930//CSTF64//BEE1//AT1G30455//MORF9//SCL-3//ATERF3//BPE//CLPP6//KNATM//TAF6B//AT1G23410//AT1G10610//ATVLN1//anac036//AtMYB100//IAA10//AT1G11950//AT1G05290//AT1G70000//AT2G25420//AT2G03420//AT2G22760//AtWRKY12//AGL6 GO:1903506 regulation of nucleic acid-templated tra... BP 0.0831868603964491 AtMYB18//AT-HSFB4//ARF7//AT1G16690//tny//AT5G66980//ATDDM1//ATMYB96//CLB4//ATMYB111//SDG18//RLT2//ATAUX2-11//AT5G38180//ARF8//AT5G18450//VDD//LEP//ATGSL12//AT5G13240//ATHB51//AT5G02460//DPA//SPL12//AGL1//GIS//AT3G57600//AGL16//ATBZIP24//AtCYP71//AtGRF2//ATMYB69//NFD1//AtC3H49//AtMYB85//EBS//AT4G21820//AtMYB42//AT4G03170//AtWRKY22//MED25//AT1G35890//AT1G75150//DDL//MEE35//GTE01//ATMSH2//AT3G28460//AtMYB110//AtULP1a//AT3G06410//AT3G10310//ATMYB57//AT1G28160//AtMYB20//AT1G80580//APG13//UMAMIT23//MOM//EMB2733//SKP2A//ANAC007//ANAC013//AT1G32930//CSTF64//BEE1//AT1G30455//MORF9//SCL-3//ATERF3//BPE//CLPP6//KNATM//TAF6B//AT1G23410//AT1G10610//ATVLN1//anac036//AtMYB100//IAA10//AT1G11950//AT1G05290//AT1G70000//AT2G25420//AT2G03420//AT2G22760//AtWRKY12//AGL6 GO:2001141 regulation of RNA biosynthetic process BP 0.0831868603964491 AtMYB18//AT-HSFB4//ARF7//AT1G16690//tny//AT5G66980//ATDDM1//ATMYB96//CLB4//ATMYB111//SDG18//RLT2//ATAUX2-11//AT5G38180//ARF8//AT5G18450//VDD//LEP//ATGSL12//AT5G13240//ATHB51//AT5G02460//DPA//SPL12//AGL1//GIS//AT3G57600//AGL16//ATBZIP24//AtCYP71//AtGRF2//ATMYB69//NFD1//AtC3H49//AtMYB85//EBS//AT4G21820//AtMYB42//AT4G03170//AtWRKY22//MED25//AT1G35890//AT1G75150//DDL//MEE35//GTE01//ATMSH2//AT3G28460//AtMYB110//AtULP1a//AT3G06410//AT3G10310//ATMYB57//AT1G28160//AtMYB20//AT1G80580//APG13//UMAMIT23//MOM//EMB2733//SKP2A//ANAC007//ANAC013//AT1G32930//CSTF64//BEE1//AT1G30455//MORF9//SCL-3//ATERF3//BPE//CLPP6//KNATM//TAF6B//AT1G23410//AT1G10610//ATVLN1//anac036//AtMYB100//IAA10//AT1G11950//AT1G05290//AT1G70000//AT2G25420//AT2G03420//AT2G22760//AtWRKY12//AGL6