GOID TERM ONTOLOGY pValue Genes GO:0009954 proximal/distal pattern formation BP 0.000404725873109162 ATBT4//AT1G01640//AT1G21780//AT2G40440//AS2//DRB1 GO:0010227 floral organ abscission BP 0.0011920167364234 ATBT4//ATH1//AT1G64405//AT1G01640//AT1G21780//AT2G40440//sks16 GO:0009838 abscission BP 0.00129984738012192 ATBT4//ATH1//ALPHA-DOX1//AT1G64405//AT1G01640//AT1G21780//AT2G40440//sks16 GO:0007623 circadian rhythm BP 0.00406391720372717 EBF2//ATCKA1//UVR8//ATIM//HY5//CKB3//ATCKA2//AT4G33980//SRF3//AT4G02630//GATA1//AMY3//EPR1//ADS2//AT2G21130 GO:0048511 rhythmic process BP 0.00406391720372717 EBF2//ATCKA1//UVR8//ATIM//HY5//CKB3//ATCKA2//AT4G33980//SRF3//AT4G02630//GATA1//AMY3//EPR1//ADS2//AT2G21130 GO:0009787 regulation of abscisic acid-activated si... BP 0.00766822503640001 HAI1//ABI2//ATMYB33//ARAC8//ATB//ATBG1 GO:0006997 nucleus organization BP 0.0110578797430194 AT5G64680//ATH2//EDA40//ATPRMT3//CRM1B//AT1G63470//WDR55//EMB2776 GO:0010212 response to ionizing radiation BP 0.0110578797430194 AT4G17620//ATCKA1//ATATR//GMI1//ATCKA2//DRT111//AtXRN3//AT1G67420 GO:0000741 karyogamy BP 0.0113257098349879 AT5G64680//EDA40//ATPRMT3//CRM1B//WDR55//EMB2776 GO:0048284 organelle fusion BP 0.0113257098349879 AT5G64680//EDA40//ATPRMT3//CRM1B//WDR55//EMB2776 GO:1901419 regulation of response to alcohol BP 0.0113257098349879 HAI1//ABI2//ATMYB33//ARAC8//ATB//ATBG1 GO:0010332 response to gamma radiation BP 0.0115391051523505 AT4G17620//ATCKA1//ATATR//GMI1//ATCKA2//AtXRN3//AT1G67420 GO:0009106 lipoate metabolic process BP 0.0122931949620307 AtCLA1//AT5G08415//ATH1//FAB2//AVDE1 GO:0016109 tetraterpenoid biosynthetic process BP 0.014754642587431 AtCLA1//AAE15//OVA2//SQD2//HCF244//ATH1//FAB2//PAC//AVDE1 GO:0016117 carotenoid biosynthetic process BP 0.014754642587431 AtCLA1//AAE15//OVA2//SQD2//HCF244//ATH1//FAB2//PAC//AVDE1 GO:0016108 tetraterpenoid metabolic process BP 0.0184860076354029 AtCLA1//AAE15//OVA2//SQD2//HCF244//ATH1//FAB2//PAC//AVDE1 GO:0016116 carotenoid metabolic process BP 0.0184860076354029 AtCLA1//AAE15//OVA2//SQD2//HCF244//ATH1//FAB2//PAC//AVDE1 GO:0052545 callose localization BP 0.0262551028138027 PDCB1//FLS2//ATNPR3//ATGSL09//ATSZF1//AT3G16330//HSR8//AGL17 GO:0033037 polysaccharide localization BP 0.0292346951453766 PDCB1//FLS2//ATNPR3//ATGSL09//ATSZF1//AT3G16330//HSR8//AGL17 GO:0006636 unsaturated fatty acid biosynthetic proc... BP 0.0293183162923752 AtCLA1//AAE15//SQD2//ATH1//FAB2//AVDE1 GO:0033559 unsaturated fatty acid metabolic process BP 0.0293183162923752 AtCLA1//AAE15//SQD2//ATH1//FAB2//AVDE1 GO:0006631 fatty acid metabolic process BP 0.0298942015832343 AtCLA1//AAE15//AT5G08415//BCCP2//ACX2//AT5G51140//ATBI-1//AT5G23540//ATDCP2//SQD2//ARI1//ATH1//PBB1//ALPHA-DOX1//ATCAD1//CYP86A7//FAB2//ACOS5//AT1G21780//ATILP1//AtXRN3//ADS2//AT1G10310//RPT5B//AVDE1 GO:0009789 positive regulation of abscisic acid-act... BP 0.0310317831593326 ATMYB33//ATB//ATBG1 GO:0018871 1-aminocyclopropane-1-carboxylate metabo... BP 0.0310317831593326 ACS5//AOAT2//ACC4 GO:0031407 oxylipin metabolic process BP 0.0310317831593326 AtCLA1//ATH1//AVDE1 GO:0042218 1-aminocyclopropane-1-carboxylate biosyn... BP 0.0310317831593326 ACS5//AOAT2//ACC4 GO:0045037 protein import into chloroplast stroma BP 0.0310317831593326 MAR1//AtTic21//AtHsp90.5 GO:0019953 sexual reproduction BP 0.0366884085163854 AT5G64680//KPL//ATGRP-8//ATMYB33//ATEXPB5//GIG1//ANT//ATPRMT3//XTH3//AT3G17030//CRM1B//DRT111//AT1G23240//AT2G42640//EMB2776 GO:0009853 photorespiration BP 0.0386177941794623 ATSAHH1//AT5G47570//AT5G23540//AtCAL2//IDH-I//ATB//AT1G51650//TOM40//PBB1//AOAT2//cICDH//AT1G67350 GO:0006721 terpenoid metabolic process BP 0.0439233468718763 AtCLA1//AAE15//FCLY//OVA2//AT5G44630//ATMYB33//SQD2//HCF244//ATH1//ATNCED6//ATBG1//ATGA2OX2//FAB2//ATGA3OX1//PAC//PES1//AVDE1 GO:0048439 flower morphogenesis BP 0.0462771448702675 ATBT4//PXY//ANT//AtMORC6//AT1G01640//AT1G21780//AT2G40440 GO:0001522 pseudouridine synthesis BP 0.0510621500559664 AT5G51140//AT1G34150//AT1G20410 GO:1901421 positive regulation of response to alcoh... BP 0.0510621500559664 ATMYB33//ATB//ATBG1 GO:0009825 multidimensional cell growth BP 0.0520412085096685 COB//ATGH9A1//ATEXP2//ATEXPB5//CVP1//ACT2//SKU6//AT1G04040 GO:0006974 cellular response to DNA damage stimulus BP 0.0532964252319462 AT4G17620//AT4G17760//AT5G26680//ATCKA1//CYCA3;1//ATATR//GMI1//DRT101//ATCKA2//AT4G31150//ATNAP1;1//AT4G05250//AT2G43280//ATNUDT1//DRT111//At-FANCM//AtXRN3//AT1G67420 GO:0042752 regulation of circadian rhythm BP 0.0550874876911726 EBF2//UVR8//ATIM//HY5//CKB3 GO:0044743 intracellular protein transmembrane impo... BP 0.0604530261497902 ATDCP2//MAR1//ARI1//ATTIM23-1//AT1G21780//ATILP1//AtXRN3//AtTic21//AtHsp90.5 GO:0065002 intracellular protein transmembrane tran... BP 0.0604530261497902 ATDCP2//MAR1//ARI1//ATTIM23-1//AT1G21780//ATILP1//AtXRN3//AtTic21//AtHsp90.5 GO:0071806 protein transmembrane transport BP 0.0604530261497902 ATDCP2//MAR1//ARI1//ATTIM23-1//AT1G21780//ATILP1//AtXRN3//AtTic21//AtHsp90.5 GO:0015995 chlorophyll biosynthetic process BP 0.0616371611937657 AtCLA1//AAE15//ATGLK2//SQD2//ATH1//AT3G13120//FAB2//AVDE1 GO:0010089 xylem development BP 0.0617377247582215 ANAC105//PXY//GAUT12//TBL3//ANT//AT3G19200//MEL4 GO:0006544 glycine metabolic process BP 0.0700778029879909 AtCLA1//SHM2//ATH1//FAB2//AVDE1 GO:0043094 cellular metabolic compound salvage BP 0.0730850769235427 ATSAHH1//AT5G47570//AT5G23540//AtCAL2//IDH-I//ATB//AT1G51650//TOM40//PBB1//AOAT2//cICDH//AT1G67350 GO:0006655 phosphatidylglycerol biosynthetic proces... BP 0.0783330684626048 AtCLA1//AAE15//EMB2768//FAB2//AVDE1 GO:0052542 defense response by callose deposition BP 0.0783330684626048 FLS2//ATNPR3//ATSZF1//AT3G16330//HSR8 GO:0009812 flavonoid metabolic process BP 0.0785528266174463 UGT84A1//ATFLS2//ATGSTF12//HY5//anac078//ATCPK32//AT3G57020//AT3G55470//MYC4//AT3G19370//AT2G03770//BAN//AHP5//ANAC042//AtWRKY12 GO:0046471 phosphatidylglycerol metabolic process BP 0.0870857027787172 AtCLA1//AAE15//EMB2768//FAB2//AVDE1 GO:0019941 modification-dependent protein catabolic... BP 0.0898592192864931 ATSAHH1//EBF2//ACX2//FCLY//ATUBC7//AT5G47570//UBQ9//AT5G37890//AT5G23540//CYC2BAT//ASK6//AtCAL2//AT4G05470//ATB//PBB1//cICDH//AT1G53790//AT1G65110//ATUBP4//AT2G36370//RPT5B//AT1G67350//AT1G51290 GO:0043632 modification-dependent macromolecule cat... BP 0.0898592192864931 ATSAHH1//EBF2//ACX2//FCLY//ATUBC7//AT5G47570//UBQ9//AT5G37890//AT5G23540//CYC2BAT//ASK6//AtCAL2//AT4G05470//ATB//PBB1//cICDH//AT1G53790//AT1G65110//ATUBP4//AT2G36370//RPT5B//AT1G67350//AT1G51290 GO:0001676 long-chain fatty acid metabolic process BP 0.0899574728070319 ACX2//ACOS5//ADS2 GO:0009788 negative regulation of abscisic acid-act... BP 0.0899574728070319 HAI1//ABI2//ARAC8 GO:1901420 negative regulation of response to alcoh... BP 0.0899574728070319 HAI1//ABI2//ARAC8 GO:0006863 purine nucleobase transport BP 0.0966778235197563 AT5G25860//AT5G48420//AT5G46310//AT3G58890//AT4G05140//AT3G25280//AT1G71910//ATPUP11 GO:0015851 nucleobase transport BP 0.0966778235197563 AT5G25860//AT5G48420//AT5G46310//AT3G58890//AT4G05140//AT3G25280//AT1G71910//ATPUP11 GO:0006779 porphyrin-containing compound biosynthet... BP 0.0978977307273625 AtCLA1//AAE15//ATGLK2//SQD2//ATH1//AT3G13120//HEME1//FAB2//AVDE1 GO:0006281 DNA repair BP 0.0989832649390071 AT4G17620//AT4G17760//AT5G26680//ATCKA1//CYCA3;1//ATATR//GMI1//DRT101//ATCKA2//AT4G31150//ATNAP1;1//AT4G05250//AT2G43280//DRT111//At-FANCM GO:0046283 anthocyanin-containing compound metaboli... BP 0.10455672250622 ATGSTF12//HY5//MYC4//AHP5//ANAC042//AtWRKY12 GO:0046148 pigment biosynthetic process BP 0.107996733112148 AtCLA1//AAE15//OVA2//ATGLK2//ATGSTF12//SQD2//HCF244//ATH1//MYC4//AT3G13120//FAB2//PAC//AVDE1//ANAC042//AtWRKY12 GO:0007264 small GTPase mediated signal transductio... BP 0.110435066467154 ATRAB2B//AtRABA1f//AtRABA5a//ARFA1E//ARAC8//ATRAB8E//AT1G78010//ARFB1A GO:0009735 response to cytokinin BP 0.110606619715521 ADA2B//ACS5//ACX2//ATGH9A1//AT2G34020//ACT2//AT1G17350//DRB1//AHP5 GO:0033014 tetrapyrrole biosynthetic process BP 0.110606619715521 AtCLA1//AAE15//ATGLK2//SQD2//ATH1//AT3G13120//HEME1//FAB2//AVDE1 GO:0009411 response to UV BP 0.111150943580025 UGT84A1//ATCKA1//UVR8//COB//ATGH9A1//DRT101//ATGSTF12//HY5//AT3G57020//ATCKA2//ATB//ACT2//SKU6//AT1G04040 GO:0009755 hormone-mediated signaling pathway BP 0.11473078420093 EBF2//FCLY//PDCB1//HAI1//ATEXO70B1//ABI2//THE1//ATGH9A1//ATBI-1//ATNPR3//HY5//ATMYB33//ATCPK32//BG3//ATSZF1//AtMYB109//ATCRR3//ARAC8//ARI1//BRS1//ATMEK1//ATB//AT2G34020//CYP71B22//AtERF98//ATBG1//AtERF73//FAB2//AT1G17350//ATGA3OX1//RGLG4//HSR8//AXR3//AHP5//FRK1//AT2G30550 GO:0000038 very long-chain fatty acid metabolic pro... BP 0.115335484967002 AT5G51140//ATBI-1//ADS2//AT1G10310 GO:0006546 glycine catabolic process BP 0.115335484967002 AtCLA1//ATH1//FAB2//AVDE1 GO:0052543 callose deposition in cell wall BP 0.115335484967002 PDCB1//FLS2//ATGSL09//AGL17 GO:0007031 peroxisome organization BP 0.117693655925992 ATDCP2//ARI1//PEX22//ATTIM23-1//PEX11A//AT1G21780//ATILP1//AtXRN3 GO:0009813 flavonoid biosynthetic process BP 0.119551040634339 UGT84A1//ATFLS2//ATGSTF12//HY5//anac078//ATCPK32//AT3G57020//AT3G55470//MYC4//AT3G19370//BAN//ANAC042//AtWRKY12 GO:0006511 ubiquitin-dependent protein catabolic pr... BP 0.122052105480031 ATSAHH1//EBF2//ACX2//ATUBC7//AT5G47570//UBQ9//AT5G37890//AT5G23540//CYC2BAT//ASK6//AtCAL2//AT4G05470//ATB//PBB1//cICDH//AT1G53790//AT1G65110//ATUBP4//AT2G36370//RPT5B//AT1G67350//AT1G51290 GO:0044265 cellular macromolecule catabolic process BP 0.122325535124473 ADA2B//ATSAHH1//EBF2//ACX2//FCLY//AT5G59830//ATUBC7//AT5G47570//UBQ9//AT5G37890//AT5G23540//ATFTSH6//ATDCP2//CYC2BAT//ASK6//AtCAL2//UKL4//AT4G05470//ATB//AT3G22220//PBB1//ACT2//CRM1B//cICDH//AT1G53790//FTSH8//AtXRN3//AT1G65110//ATUBP4//AT2G36370//RPT5B//AT1G67350//AT1G51290 GO:0019395 fatty acid oxidation BP 0.126034608967704 ACX2//AT5G23540//ATDCP2//ARI1//PBB1//ALPHA-DOX1//ATCAD1//AT1G21780//ATILP1//AtXRN3//RPT5B GO:0044257 cellular protein catabolic process BP 0.126550511651014 ATSAHH1//EBF2//ACX2//FCLY//ATUBC7//AT5G47570//UBQ9//AT5G37890//AT5G23540//ATFTSH6//CYC2BAT//ASK6//AtCAL2//UKL4//AT4G05470//ATB//PBB1//ACT2//CRM1B//cICDH//AT1G53790//FTSH8//AT1G65110//ATUBP4//AT2G36370//RPT5B//AT1G67350//AT1G51290 GO:0017038 protein import BP 0.127461029112467 ATDCP2//MAR1//AT4G40000//ARI1//ATPRMT3//CRM1B//NOF1//ATTIM23-1//AT1G21780//ATILP1//AtXRN3//AtTic21//AtHsp90.5//AT2G40430//AT2G25970 GO:0052386 cell wall thickening BP 0.128064397272139 PDCB1//FLS2//ATGSL09//AGL17 GO:0048437 floral organ development BP 0.1336755492306 AT4G14330//ATBT4//AT5G56040//AT5G51950//OVA2//CYP78A7//MAR1//ATH1//ATB//MEE35//EMB2768//WAK2//AT1G20410//AT1G64405//AtEGL3//AT1G63470//AT1G01640//AT1G64500//ATCEL2//AT1G21780//EMB1968//AtHsp90.5//AT2G40440//AGO5//AS2//AT1G23000//AtNIK3//sks16 GO:0009967 positive regulation of signal transducti... BP 0.137727478085615 ATMYB33//ATB//ATBG1 GO:0023056 positive regulation of signaling BP 0.137727478085615 ATMYB33//ATB//ATBG1 GO:0009738 abscisic acid-activated signaling pathwa... BP 0.140829545493808 FCLY//HAI1//ATEXO70B1//ABI2//ATBI-1//ATMYB33//ATCPK32//ATCRR3//ARAC8//ATB//ATBG1//HSR8 GO:0006397 mRNA processing BP 0.140941331472893 AT5G64680//AT3G11870//CPSF73-I//ATCPSF30//PAC//GRP23//DRB1//EMB2776 GO:0009071 serine family amino acid catabolic proce... BP 0.141348484063841 AtCLA1//ATH1//FAB2//AVDE1 GO:0010074 maintenance of meristem identity BP 0.141348484063841 HY5//ANT//CAK1AT//POL GO:0072594 establishment of protein localization to... BP 0.144646508439662 AT5G64680//CIA2//AT5G53310//ATTOM22-V//TOM20-4//AT5G23540//ATDCP2//WLIM2b//MAR1//AT4G40000//ARI1//AT4G26710//ATPRMT3//TOM40//CRM1B//NOF1//ATTIM23-1//AT1G21780//ATILP1//AtXRN3//AT1G65720//AT1G30580//AtTic21//AtHsp90.5//AT2G40430//AT2G25970 GO:0030163 protein catabolic process BP 0.144807995934234 ATSAHH1//EBF2//ACX2//FCLY//ATUBC7//AT5G47570//UBQ9//AT5G37890//AT5G23540//ATFTSH6//CYC2BAT//ASK6//AtCAL2//UKL4//AT4G05470//ATB//PBB1//ACT2//CRM1B//cICDH//AT1G53790//FTSH8//AT1G65110//ATUBP4//AT2G36370//RPT5B//AT1G67350//AT1G51290 GO:0080129 proteasome core complex assembly BP 0.146150214447707 ATSAHH1//AT5G47570//AT5G23540//AtCAL2//ATB//PBB1//cICDH//RPT5B//AT1G67350 GO:0006811 ion transport BP 0.146980590746237 YCF5//AtCLA1//AT1G57780//EMB1144//AST12//AT1G51840//AAP3//AER//COB//AT5G48430//FLS2//PHT4;6//ASFT//AT5G24230//ATSPX4//AT5G14120//NAKR1//AT3G57750//AT3G58060//ATFER3//ATCHITIV//LBD38//AT3G46960//ATFP6//AT4G26710//AT4G22212//AT4G11730//AT1G25530//CYP87A2//AT1G51650//TOM40//AT3G27150//ACT2//AT3G19390//AT3G06450//ALPHA-DOX1//ATGLR1.4//ATMLP-300B//ATGSTF14//BOR5//MOT2//SS2//AT1G51610//FAB2//ATTIM23-1//AT1G53030//AT1G30473//AT1G56145//AT1G68710//RGLG4//AAP8//AT1G23000//ATC//AT2G03240//FRK1 GO:0034440 lipid oxidation BP 0.152071970061957 ACX2//AT5G23540//ATDCP2//ARI1//PBB1//ALPHA-DOX1//ATCAD1//AT1G21780//ATILP1//AtXRN3//RPT5B GO:0015979 photosynthesis BP 0.153134795630503 NDHH//YCF5//RPL33//RPL22//PSBK//ABI2//ATGLK2//CRR7//BG3//ATFER3//HCF244//NARA5//ATMEK1//PSBTN//AT3G13120//HCF243//PSAH-1//CP12//CLPP6//AtTic20-II//AT2G42220 GO:0009404 toxin metabolic process BP 0.15353870110174 AER//AT5G14730//AT5G57480//AT5G23540//ATGSTF12//AT5G17380//AT5G12110//PBB1//ATGSTF14//ATGPX2//RPT5B//ANAC042 GO:0009966 regulation of signal transduction BP 0.15387819615281 EBF2//HAI1//ABI2//ATMYB33//ARAC8//ATB//ATBG1//FAB2//AHP5 GO:0000724 double-strand break repair via homologou... BP 0.155150243483468 CYCA3;1//GMI1//DRT111//At-FANCM GO:0000725 recombinational repair BP 0.155150243483468 CYCA3;1//GMI1//DRT111//At-FANCM GO:0010193 response to ozone BP 0.15522913894537 ATGH9A1//AT4G11170//ACT2 GO:0009057 macromolecule catabolic process BP 0.158239212928824 ADA2B//ATSAHH1//EBF2//ACX2//FCLY//COB//AT5G59830//ATUBC7//AT5G47570//UBQ9//AT5G37890//AT5G23540//ATFTSH6//ATDCP2//CYC2BAT//ASK6//AtCAL2//UKL4//AT4G05470//ATB//AT3G22220//PBB1//ACT2//CRM1B//AMY3//cICDH//AT1G53790//FTSH8//AtXRN3//AT1G65110//ATUBP4//AT2G36370//RPT5B//AT1G67350//AT1G51290 GO:0009559 embryo sac central cell differentiation BP 0.160662937945665 EDA40//WDR55 GO:0010160 formation of organ boundary BP 0.160662937945665 ATH1//AtMYB117 GO:0048859 formation of anatomical boundary BP 0.160662937945665 ATH1//AtMYB117 GO:0051783 regulation of nuclear division BP 0.160662937945665 GIG1//At-FANCM GO:0016101 diterpenoid metabolic process BP 0.161171211383105 ATMYB33//ATH1//ATGA2OX2//ATGA3OX1//PES1 GO:0023051 regulation of signaling BP 0.161802446241069 EBF2//HAI1//ABI2//ATMYB33//ARAC8//ATB//ATBG1//FAB2//AHP5 GO:0019318 hexose metabolic process BP 0.163902408201983 ATSAHH1//UVR8//ABCF1//AT3G61610//UKL4//ATB//CVP1//G6PD5//PBB1//ACT2//CRM1B//CP12//cICDH//HSR8//AT1G30580//RPT5B//AT2G46170