GOID TERM ONTOLOGY pValue Genes GO:0006606 protein import into nucleus BP 0.00439423710960471 AT1G30240//AT1G57650//AT5G15550//AT5G14580//AT4G40000//AT3G11964//RPSAb//ATGSL10//CRM1B//AtELP2//AT2G40430//AT2G25970 GO:0044744 protein targeting to nucleus BP 0.00439423710960471 AT1G30240//AT1G57650//AT5G15550//AT5G14580//AT4G40000//AT3G11964//RPSAb//ATGSL10//CRM1B//AtELP2//AT2G40430//AT2G25970 GO:1902593 single-organism nuclear import BP 0.00439423710960471 AT1G30240//AT1G57650//AT5G15550//AT5G14580//AT4G40000//AT3G11964//RPSAb//ATGSL10//CRM1B//AtELP2//AT2G40430//AT2G25970 GO:0034504 protein localization to nucleus BP 0.00480569929387232 AT1G30240//AT1G57650//AT5G15550//AT5G14580//AT4G40000//AT3G11964//RPSAb//ATGSL10//CRM1B//AtELP2//AT2G40430//AT2G25970 GO:0051170 nuclear import BP 0.00480569929387232 AT1G30240//AT1G57650//AT5G15550//AT5G14580//AT4G40000//AT3G11964//RPSAb//ATGSL10//CRM1B//AtELP2//AT2G40430//AT2G25970 GO:0006743 ubiquinone metabolic process BP 0.0100749699526147 AT5G66120//AT3G24200//ISPF//AT2G22230 GO:0006744 ubiquinone biosynthetic process BP 0.0100749699526147 AT5G66120//AT3G24200//ISPF//AT2G22230 GO:0006913 nucleocytoplasmic transport BP 0.0115715007333407 AT1G30240//AT1G57650//AT5G15550//AT5G14580//AT4G40000//AT3G11964//RPSAb//ATGSL10//CRM1B//AtELP2//AT2G40430//ARA-4//POL//AT2G25970 GO:0051169 nuclear transport BP 0.0115715007333407 AT1G30240//AT1G57650//AT5G15550//AT5G14580//AT4G40000//AT3G11964//RPSAb//ATGSL10//CRM1B//AtELP2//AT2G40430//ARA-4//POL//AT2G25970 GO:0009593 detection of chemical stimulus BP 0.0201802618009208 ACAM-1//KNAT5//AtCERK1 GO:0010449 root meristem growth BP 0.0258163023661532 ARR11//PCN//RRG GO:0080050 regulation of seed development BP 0.0258163023661532 ATDOG1//HSI2-L1//SHB1 GO:0031047 gene silencing by RNA BP 0.0285240107101622 ATRPA70B//emb1967//AT3G46960//ATDCL3//ANT//AT4G21820//EOL1//AT3G20010//PLSP1//ATTSO1//FDM4//CPSF73-I//AT1G32930//ATMAP70-3//HDA13//CLF GO:0006305 DNA alkylation BP 0.0312873077560031 ATRPA70B//ATDCL3//ANT//AT4G21820//MCM7//AT3G20010//ATTSO1//FDM4//AtELP2//HTA8//CLF GO:0006306 DNA methylation BP 0.0312873077560031 ATRPA70B//ATDCL3//ANT//AT4G21820//MCM7//AT3G20010//ATTSO1//FDM4//AtELP2//HTA8//CLF GO:0044728 DNA methylation or demethylation BP 0.0352677251614137 ATRPA70B//ATDCL3//ANT//AT4G21820//MCM7//AT3G20010//ATTSO1//FDM4//AtELP2//HTA8//CLF GO:0042181 ketone biosynthetic process BP 0.0360687443830166 AT5G66120//AT3G24200//ISPF//AT2G22230 GO:1901661 quinone metabolic process BP 0.0360687443830166 AT5G66120//AT3G24200//ISPF//AT2G22230 GO:1901663 quinone biosynthetic process BP 0.0360687443830166 AT5G66120//AT3G24200//ISPF//AT2G22230 GO:0006304 DNA modification BP 0.0373860510969903 ATRPA70B//ATDCL3//ANT//AT4G21820//MCM7//AT3G20010//ATTSO1//FDM4//AtELP2//HTA8//CLF GO:0006346 methylation-dependent chromatin silencin... BP 0.0396345614782183 emb1967//ANT//AT4G21820//AT3G20010//ATTSO1//CPSF73-I//AT1G32930//ATMAP70-3 GO:0010014 meristem initiation BP 0.0402592582318806 ATDCL3//ANT//HSI2-L1//EOL1//AT3G20010//TPR2//CPSF73-I//AT2G28240//ATSCAR2//ATAMPD GO:0052545 callose localization BP 0.0445940010678783 PDCB1//ATWRKY67//ATGSL10//NSL1//AGL17//AtPP2-B6 GO:0010073 meristem maintenance BP 0.0454518331458013 ARR11//AT5G09760//ATDCL3//ANT//PCN//EOL1//AT3G20010//CPSF73-I//RRG//AtELP2//AT2G22230//FAF2//AT2G28240//POL GO:0048574 long-day photoperiodism, flowering BP 0.0471968222004177 RVE1//ATVOZ1//AGL17 GO:0051302 regulation of cell division BP 0.0473491575612688 BASL//ATTSO1//RRG//SKP2A//ATE2F2 GO:0033037 polysaccharide localization BP 0.0486742262981582 PDCB1//ATWRKY67//ATGSL10//NSL1//AGL17//AtPP2-B6 GO:0048507 meristem development BP 0.0527966815082972 ARR11//AT5G09760//ATDCL3//ATHB-16//ANT//HSI2-L1//PCN//EOL1//AT3G20010//TPR2//ATTSO1//CPSF73-I//RPK1//RRG//AtELP2//AT2G22230//FAF2//ATHM3//AT2G28240//POL//ATSCAR2//ATAMPD GO:0048571 long-day photoperiodism BP 0.0557634034883723 RVE1//ATVOZ1//AGL17 GO:1901658 glycosyl compound catabolic process BP 0.0557634034883723 AtHNL//ESP//AT-CDA1 GO:0032259 methylation BP 0.0614201886294348 AT5G15550//AT5G64150//AT5G59850//ATXR7//ATRPA70B//ATDCL3//AT3G42860//ANT//AT4G21820//EMB1691//MCM7//AT3G20010//AT3G11964//AT3G18600//ATTSO1//AT3G04840//FDM4//AT1G32930//AtELP2//HTA8//ATMAP70-3//HDA13//CLF GO:0048509 regulation of meristem development BP 0.0635941736425508 ARR11//AT5G09760//ATDCL3//ATHB-16//ATTSO1//RRG//AT2G22230//FAF2//ATHM3//AT2G28240//POL GO:0006338 chromatin remodeling BP 0.0650113483979865 AT3G20010//CPSF73-I//HTA8 GO:0031123 RNA 3'-end processing BP 0.0650113483979865 RPSAb//CPSF73-I//CSTF64 GO:0017038 protein import BP 0.0697467217576578 AT1G30240//AT1G57650//AT5G15550//AT5G14580//AT4G40000//AT3G11964//RPSAb//ATGSL10//CRM1B//AtELP2//AtHsp90.5//AT2G40430//ATTIM17-2//AT2G25970 GO:0016246 RNA interference BP 0.0771099334355592 emb1967//ATDCL3//ANT//AT4G21820//EOL1//AT3G20010//PLSP1//CPSF73-I//HDA13 GO:0016569 covalent chromatin modification BP 0.0816448283153251 ATXR7//AT5G23480//ATRPA70B//emb1967//ATDCL3//AT3G42860//ANT//AT4G21820//MCM7//AT3G20010//AT3G18600//ATTSO1//CPSF73-I//AT1G32930//AtELP2//HTA8//ATMAP70-3//CLF GO:0043414 macromolecule methylation BP 0.0831964866038829 AT5G15550//AT5G64150//AT5G59850//ATXR7//ATRPA70B//ATDCL3//AT3G42860//ANT//AT4G21820//MCM7//AT3G20010//AT3G11964//AT3G18600//ATTSO1//AT3G04840//FDM4//AT1G32930//AtELP2//HTA8//ATMAP70-3//HDA13//CLF GO:0016458 gene silencing BP 0.0847785014277587 ATRPA70B//emb1967//AT3G46960//ATDCL3//ANT//AT4G21820//EOL1//MCM7//AT3G20010//PLSP1//ATTSO1//FDM4//CPSF73-I//AT1G32930//ATMAP70-3//HDA13//CLF GO:0035194 posttranscriptional gene silencing by RN... BP 0.0898208797932323 emb1967//ATDCL3//ANT//AT4G21820//EOL1//AT3G20010//PLSP1//CPSF73-I//HDA13 GO:0015979 photosynthesis BP 0.0904831026788455 RPL33//RPL20//RPL22//PSBK//LIL3:1//ARRPS1//LHCB3//CRR7//CP12//LHCA1//ACO1//NARA5//PLSP1//APO1//AT2G04039//OTP51//AT2G42220 GO:0007051 spindle organization BP 0.0908200943534303 MAP65-4//ATGIP1//ATTSO1//ATMAP70-3 GO:0006364 rRNA processing BP 0.0931576853537597 LIL3:1//AT5G15550//ARRPS1//LHCA1//ATTIF3K1//AT1G48830//AT3G11964//PLSP1//RPSAb//ISPF//AT1G43860//POP4 GO:0016072 rRNA metabolic process BP 0.0931576853537597 LIL3:1//AT5G15550//ARRPS1//LHCA1//ATTIF3K1//AT1G48830//AT3G11964//PLSP1//RPSAb//ISPF//AT1G43860//POP4 GO:0009408 response to heat BP 0.0940610397012415 ATJ2//CP12//AT4G39960//ATFP6//AIRP1//ATEGY3//AT3G10680//ERD14//AtHsp90.5//AT2G36220//AT2G31240//AT2G29500//ARA-4 GO:0010286 heat acclimation BP 0.0955515372820998 ATFP6//AIRP1//ERD14//AT2G36220//AT2G29500 GO:0006897 endocytosis BP 0.096538831044529 ADL1//AT1G33900//AT1G78010 GO:0042991 transcription factor import into nucleus BP 0.096538831044529 AT1G57650//AT5G14580//AT4G40000 GO:0040029 regulation of gene expression, epigeneti... BP 0.0972015832821328 ATRPA70B//emb1967//AT3G46960//ATDCL3//ANT//AT4G21820//EOL1//MCM7//AT3G20010//PLSP1//ATTSO1//FDM4//CPSF73-I//AT1G32930//AtELP2//HTA8//ATMAP70-3//HDA13//CLF GO:0006655 phosphatidylglycerol biosynthetic proces... BP 0.0994685959439798 AtCLA1//AAE15//EMB2768//ISPF GO:0010393 galacturonan metabolic process BP 0.0994685959439798 ASFT//AT4G28370//ATPMEPCRA//ABCG35 GO:0015996 chlorophyll catabolic process BP 0.0994685959439798 AT3G57680//AAH//AT3G14067//AAE1 GO:0045488 pectin metabolic process BP 0.0994685959439798 ASFT//AT4G28370//ATPMEPCRA//ABCG35 GO:0046149 pigment catabolic process BP 0.0994685959439798 AT3G57680//AAH//AT3G14067//AAE1 GO:0043069 negative regulation of programmed cell d... BP 0.0994708532029356 ATBT1//AT4G20830//ATFAH2//AtCERK1//RPK1//NSL1//AHP5//ATCAL4 GO:0000478 endonucleolytic cleavage involved in rRN... BP 0.103308188028271 AT5G15550//RPSAb GO:0010082 regulation of root meristem growth BP 0.103308188028271 ARR11//RRG GO:0090502 RNA phosphodiester bond hydrolysis, endo... BP 0.103308188028271 AT5G15550//RPSAb GO:0060548 negative regulation of cell death BP 0.10465902463242 ATBT1//AT4G20830//ATFAH2//AtCERK1//RPK1//NSL1//AHP5//ATCAL4 GO:0010565 regulation of cellular ketone metabolic ... BP 0.108195560816999 EOL1//NSL1//BDG1 GO:0046471 phosphatidylglycerol metabolic process BP 0.108483134258161 AtCLA1//AAE15//EMB2768//ISPF GO:0048508 embryonic meristem development BP 0.108483134258161 HSI2-L1//TPR2//RPK1//ATAMPD GO:0048582 positive regulation of post-embryonic de... BP 0.108483134258161 AtYUC4//HSI2-L1//ATVOZ1//AGL17 GO:0051604 protein maturation BP 0.108483134258161 AT5G15550//PLSP1//AtELP2//ATTIM17-2 GO:0042440 pigment metabolic process BP 0.111470064354761 AtCLA1//LIL3:1//AAE15//ARRPS1//AT5G64150//AT3G57680//BGLU10//AAH//AtRbcX1//AT3G14067//AAE1//ISPF//PAC//AT1G73110//AHP5 GO:0010608 posttranscriptional regulation of gene e... BP 0.112874769629022 LIL3:1//emb1967//ATDCL3//ANT//ATTIF3K1//AT4G21820//EOL1//AT3G20010//PLSP1//CPSF73-I//ATMAP4K//HDA13 GO:0006787 porphyrin-containing compound catabolic ... BP 0.117849787131351 AT3G57680//AAH//AT3G14067//AAE1 GO:0033015 tetrapyrrole catabolic process BP 0.117849787131351 AT3G57680//AAH//AT3G14067//AAE1 GO:0051187 cofactor catabolic process BP 0.117849787131351 AT3G57680//AAH//AT3G14067//AAE1 GO:0016441 posttranscriptional gene silencing BP 0.118720774387289 emb1967//ATDCL3//ANT//AT4G21820//EOL1//AT3G20010//PLSP1//CPSF73-I//HDA13 GO:0009846 pollen germination BP 0.120365159125881 ATGSL10//CRM1B//AteIF3f GO:0052386 cell wall thickening BP 0.120365159125881 PDCB1//ATGSL10//AGL17 GO:0052543 callose deposition in cell wall BP 0.120365159125881 PDCB1//ATGSL10//AGL17 GO:1901136 carbohydrate derivative catabolic proces... BP 0.120365159125881 AtHNL//ESP//AT-CDA1 GO:0000469 cleavage involved in rRNA processing BP 0.121781060523238 AT5G15550//RPSAb GO:0010091 trichome branching BP 0.121781060523238 ADL1//ATSCAR2 GO:0015994 chlorophyll metabolic process BP 0.123979575807891 AtCLA1//LIL3:1//AAE15//ARRPS1//AT3G57680//AAH//AT3G14067//AAE1//ISPF GO:0009933 meristem structural organization BP 0.125783199053324 ATDCL3//ANT//HSI2-L1//EOL1//AT3G20010//TPR2//ATTSO1//CPSF73-I//AT2G28240//POL//ATSCAR2//ATAMPD GO:0009612 response to mechanical stimulus BP 0.12755371394788 AR781//ACAM-1//ATCPK30//ATCAL4 GO:0006457 protein folding BP 0.12797343574244 AT1G67760//ATJ2//AT3G57340//AT4G39960//AtRbcX1//ATEGY3//AtJ8//AtHsp90.5//AT2G21510//AT2G21130//AT2G31240//AT1G61770//AT2G29500//CHL-CPN10 GO:0007292 female gamete generation BP 0.128806412603362 AT5G22320//emb1967//CRM1B//RRG//AtELP2//TAF9//ATMAP70-3 GO:0009560 embryo sac egg cell differentiation BP 0.128806412603362 AT5G22320//emb1967//CRM1B//RRG//AtELP2//TAF9//ATMAP70-3 GO:0007276 gamete generation BP 0.129361572232048 AT5G22320//emb1967//ANT//ATGSL10//CRM1B//RRG//AtELP2//TAF9//ATMAP70-3 GO:0007623 circadian rhythm BP 0.129361572232048 ATIM//RVE1//AtPHR1//ATGPX6//GATA1//CYP72A8//AMY3//AT1G53035//AT2G21130 GO:0048511 rhythmic process BP 0.129361572232048 ATIM//RVE1//AtPHR1//ATGPX6//GATA1//CYP72A8//AMY3//AT1G53035//AT2G21130 GO:0006633 fatty acid biosynthetic process BP 0.132779132487675 AtCLA1//AAE15//AT5G16240//ATFAH2//BUL1//ISPF//AT2G22230//AT2G04540 GO:2000243 positive regulation of reproductive proc... BP 0.13300962133731 AtYUC4//ATVOZ1//AGL17 GO:0016568 chromatin modification BP 0.134447159782748 ATXR7//AT5G23480//ATRPA70B//emb1967//ATDCL3//AT3G42860//ANT//AT4G21820//MCM7//AT3G20010//AT3G18600//ATTSO1//CPSF73-I//AT1G32930//AtELP2//HTA8//ATMAP70-3//CLF GO:0006354 DNA-templated transcription, elongation BP 0.134705750444877 RPL33//RPL20//RPL22//PSBK//ADK GO:0009668 plastid membrane organization BP 0.134865251252735 LIL3:1//SECE1//ARRPS1//NARA5//AT3G20930//PLSP1//EMB2768//ISPF//AT1G73110 GO:0010027 thylakoid membrane organization BP 0.134865251252735 LIL3:1//SECE1//ARRPS1//NARA5//AT3G20930//PLSP1//EMB2768//ISPF//AT1G73110 GO:0007017 microtubule-based process BP 0.139483892519842 MAP65-4//AT3G51150//AT4G21820//TUB9//ATGIP1//AT3G12020//TPR2//ATTSO1//SKU6//AT1G55460//ATMAP70-3//POL GO:0048532 anatomical structure arrangement BP 0.139483892519842 ATDCL3//ANT//HSI2-L1//EOL1//AT3G20010//TPR2//ATTSO1//CPSF73-I//AT2G28240//POL//ATSCAR2//ATAMPD GO:0051052 regulation of DNA metabolic process BP 0.140488957344089 ATRPA70B//MAP65-4//AT4G21820//ATTSO1//ATRAD9//AT1G27900//RRG//AtELP2//HTA8 GO:0006342 chromatin silencing BP 0.140507847101384 emb1967//AT3G46960//ATDCL3//ANT//AT4G21820//MCM7//AT3G20010//ATTSO1//CPSF73-I//AT1G32930//ATMAP70-3 GO:0009644 response to high light intensity BP 0.140925257687878 ATJ2//anac078//CP12//LHCA1//AtPHR1//ATEGY3//AT3G10680//ISPF//AT2G31240//AT2G29500 GO:0008356 asymmetric cell division BP 0.140974012154655 BASL//ATTSO1 GO:0009934 regulation of meristem structural organi... BP 0.140974012154655 ATTSO1//POL GO:0043455 regulation of secondary metabolic proces... BP 0.140974012154655 ABS//BDG1 GO:0090501 RNA phosphodiester bond hydrolysis BP 0.140974012154655 AT5G15550//RPSAb