GOID TERM ONTOLOGY pValue Genes GO:0009688 abscisic acid biosynthetic process BP 0.00749046204659712 ATNCED2//ATNCED3//BRIZ2 GO:0043289 apocarotenoid biosynthetic process BP 0.00749046204659712 ATNCED2//ATNCED3//BRIZ2 GO:1902645 tertiary alcohol biosynthetic process BP 0.00749046204659712 ATNCED2//ATNCED3//BRIZ2 GO:0042445 hormone metabolic process BP 0.00947526681790669 ATCKX3//CYP724A1//TUB6//BON2//ATMLH3//BR6OX2//PIP1;3//LAX3//AGP16 GO:0009687 abscisic acid metabolic process BP 0.0117657077933624 ATNCED2//ATNCED3//BRIZ2 GO:0016106 sesquiterpenoid biosynthetic process BP 0.0117657077933624 ATNCED2//ATNCED3//BRIZ2 GO:0043288 apocarotenoid metabolic process BP 0.0117657077933624 ATNCED2//ATNCED3//BRIZ2 GO:1902644 tertiary alcohol metabolic process BP 0.0117657077933624 ATNCED2//ATNCED3//BRIZ2 GO:0010224 response to UV-B BP 0.012480647995744 ATREV7//EFO2//BBX31//AT3G03770//UGT73C1 GO:0016129 phytosteroid biosynthetic process BP 0.012480647995744 CYP724A1//TUB6//BR6OX2//PIP1;3//LAX3 GO:0016132 brassinosteroid biosynthetic process BP 0.012480647995744 CYP724A1//TUB6//BR6OX2//PIP1;3//LAX3 GO:0009411 response to UV BP 0.0135420776566313 ATREV7//EFO2//TUB6//BBX31//AT3G03770//LAX3//SNL4//UGT73C1 GO:0048581 negative regulation of post-embryonic de... BP 0.0139006855998569 BBX1//AtDSEL//ATSGT1B//SPA2 GO:0016128 phytosteroid metabolic process BP 0.0152474547868858 CYP724A1//TUB6//BR6OX2//PIP1;3//LAX3 GO:0016131 brassinosteroid metabolic process BP 0.0152474547868858 CYP724A1//TUB6//BR6OX2//PIP1;3//LAX3 GO:0006084 acetyl-CoA metabolic process BP 0.0178122254771161 TUB6//PIP1;3//LAX3//IQD31 GO:0051241 negative regulation of multicellular org... BP 0.0178122254771161 BBX1//AtDSEL//ATSGT1B//SPA2 GO:0046165 alcohol biosynthetic process BP 0.0196750126118062 CYP724A1//TUB6//ATNCED2//BR6OX2//ATNCED3//PIP1;3//LAX3//BRIZ2//ATCB5-B GO:0006637 acyl-CoA metabolic process BP 0.0199999040252692 TUB6//PIP1;3//LAX3//IQD31 GO:0035383 thioester metabolic process BP 0.0199999040252692 TUB6//PIP1;3//LAX3//IQD31 GO:0006714 sesquiterpenoid metabolic process BP 0.0237857650247745 ATNCED2//ATNCED3//BRIZ2 GO:0009690 cytokinin metabolic process BP 0.0275283973857948 ATCKX3//BON2//ATMLH3 GO:0006354 DNA-templated transcription, elongation BP 0.0280640807041552 PSBT//RPS2//YCF6//PETA//AT2G20060 GO:0042446 hormone biosynthetic process BP 0.0295512825745002 CYP724A1//TUB6//ATMLH3//BR6OX2//PIP1;3//LAX3//AGP16 GO:0009739 response to gibberellin BP 0.0303198856583453 TUB6//GIS//ATMYB38//AT2G39540//ATEXP3 GO:0065007 biological regulation BP 0.0350430272514732 PRL1//ATREV7//BBX1//AT5G65290//ARAC10//AT5G59100//ATCKX3//AT5G53500//OVA6//AtRLP54//AT5G39230//EFO2//CYP724A1//TUB6//BON2//ATGRP-7//AT5G03870//GIS//PDE329//AT3G54930//ATTRX//AT3G48760//AtbZIP67//AT3G43230//SAMC1//BGAL3//ATPLDDELTA//ATMLH3//AT4G21323//AT4G18593//AtDSEL//AT4G18450//ATSGT1B//SPA2//CLS//IAA13//DDF1//ACR11//ATPLC2//BR6OX2//BBX31//ADOF2//AtVGT1//AT3G03770//PIP1;3//AT1G28160//LAX3//AT1G52930//AT2G41710//EMB2733//AT1G14390//AT1G33055//RSL4//AT1G08310//IQD31//AtPPsPase1//ATSERK2//AT1G13970//AT1G28570//AT1G28680//APL//anac036//AT2G40270//ATMYB38//BAN//AT1G05290//SNL4//AT1G27000//ATNHX7//APC10//AT2G16800//AGP16//AT2G44830//BRIZ2//AT2G38090//CYCB1;4 GO:0006694 steroid biosynthetic process BP 0.0359589315888678 CYP724A1//TUB6//BR6OX2//PIP1;3//LAX3//ATCB5-B GO:0065009 regulation of molecular function BP 0.0395632307688749 AT5G59100//EFO2//PDE329//ATTRX//AT4G21323//AT4G18593//AT1G13970//CYCB1;4 GO:1901700 response to oxygen-containing compound BP 0.0400246784524099 PRL1//ARAC10//AtRLP54//TUB6//GIS//LTI30//AT3G48760//AtbZIP67//ATPLDDELTA//AT4G18450//ATSGT1B//DDF1//ACR11//BBX31//ATNCED3//AT-POX//FIB4//AT3G02480//AT3G03770//PIP1;3//LysoPL2//ATSERK2//AT2G20560//anac036//AT2G40270//ATMYB38//AT1G12010//ARL1//BP80-3;3//ATNHX7//AT2G32090//NATA1//ABCC4//AT2G39540//ATEXP3 GO:0010099 regulation of photomorphogenesis BP 0.0461165575142945 BBX1//SPA2 GO:0016104 triterpenoid biosynthetic process BP 0.0461165575142945 BARS1//ATCB5-B GO:0019742 pentacyclic triterpenoid metabolic proce... BP 0.0461165575142945 BARS1//ATCB5-B GO:0019745 pentacyclic triterpenoid biosynthetic pr... BP 0.0461165575142945 BARS1//ATCB5-B GO:0042176 regulation of protein catabolic process BP 0.0461165575142945 ATREV7//APC10 GO:0072348 sulfur compound transport BP 0.0461165575142945 AST12//SAMC1 GO:0033993 response to lipid BP 0.0463814604453683 ARAC10//TUB6//GIS//LTI30//AT3G48760//AtbZIP67//ATPLDDELTA//ATNCED3//ATSERK2//ATMYB38//AT1G12010//ARL1//AT2G32090//AT2G39540//ATEXP3 GO:0009825 multidimensional cell growth BP 0.0470448054761484 TUB6//LAX3//ATGH9B1//ATEXP3 GO:0008202 steroid metabolic process BP 0.0478722389040231 CYP724A1//TUB6//BR6OX2//PIP1;3//LAX3//ATCB5-B GO:0009664 plant-type cell wall organization BP 0.0481239941632568 ARAC10//ATGRP-7//AT3G56340//BGAL3//AT4G08370//AT3G02480//AGP11//ATGH9B1//ATEXP3 GO:0010029 regulation of seed germination BP 0.0505988859497846 AtDSEL//ATSGT1B//BRIZ2 GO:1901617 organic hydroxy compound biosynthetic pr... BP 0.0508124158789812 CYP724A1//TUB6//AT3G48760//ATNCED2//ATSGT1B//BR6OX2//ATNCED3//PIP1;3//LAX3//BP80-3;3//BRIZ2//ATCB5-B GO:0006066 alcohol metabolic process BP 0.0539767982448082 CYP724A1//TUB6//ATNCED2//BR6OX2//ATNCED3//PIP1;3//LAX3//BRIZ2//ATCB5-B GO:2000030 regulation of response to red or far red... BP 0.0550833171238588 BBX1//SPA2 GO:0010817 regulation of hormone levels BP 0.0560267422815774 ATCKX3//CYP724A1//TUB6//BON2//ATMLH3//BR6OX2//PIP1;3//LAX3//AGP16 GO:0007018 microtubule-based movement BP 0.0560555149777891 TUB6//ATNACK2//ARK2 GO:0045229 external encapsulating structure organiz... BP 0.0583294418990305 ARAC10//TUB6//ATGRP-7//AT3G56340//BGAL3//AT4G08370//AT3G02480//ATCYSD1//AGP11//LAX3//ATGH9B1//ATSTP2//ATEXP3 GO:0016114 terpenoid biosynthetic process BP 0.0589738478945815 BARS1//ATNCED2//DDF1//ATNCED3//BRIZ2//ATCB5-B GO:1900140 regulation of seedling development BP 0.061779734003628 AtDSEL//ATSGT1B//BRIZ2 GO:0006722 triterpenoid metabolic process BP 0.0646018881393111 BARS1//ATCB5-B GO:0042547 cell wall modification involved in multi... BP 0.0646018881393111 ATGH9B1//ATEXP3 GO:2000026 regulation of multicellular organismal d... BP 0.0663947900278685 PRL1//BBX1//BGAL3//AtDSEL//ATSGT1B//SPA2//DDF1//AtVGT1//AT1G52930//AT1G33055//IQD31//BRIZ2 GO:0071555 cell wall organization BP 0.0702417613099601 ARAC10//TUB6//ATGRP-7//AT3G56340//BGAL3//AT4G08370//AT3G02480//ATCYSD1//AGP11//LAX3//ATGH9B1//ATEXP3 GO:0048585 negative regulation of response to stimu... BP 0.0704814873963885 BBX1//ARAC10//AtRLP54//AT3G48760//AT4G18593//ATSGT1B//SPA2//AT2G40270 GO:0051239 regulation of multicellular organismal p... BP 0.0742312580866825 PRL1//BBX1//BGAL3//AtDSEL//ATSGT1B//SPA2//DDF1//AtVGT1//AT1G52930//AT1G33055//IQD31//BRIZ2 GO:0001101 response to acid chemical BP 0.0777228861552949 ARAC10//AtRLP54//TUB6//GIS//LTI30//AT3G48760//AtbZIP67//ATPLDDELTA//ATSGT1B//DDF1//ATNCED3//AT-POX//FIB4//AT3G02480//PIP1;3//AT2G40270//ATMYB38//AT1G12010//ARL1//NATA1//ABCC4//AT2G39540//ATEXP3 GO:0019915 lipid storage BP 0.0804862595593408 PRL1//ATGRP-7//AtDSEL GO:0009894 regulation of catabolic process BP 0.0850988244995525 ATREV7//APC10 GO:0043086 negative regulation of catalytic activit... BP 0.0872069657297931 AT5G59100//AT4G21323//AT4G18593 GO:0016126 sterol biosynthetic process BP 0.0874953442954766 TUB6//PIP1;3//LAX3//ATCB5-B GO:0048580 regulation of post-embryonic development BP 0.0902965866458906 PRL1//BBX1//AtDSEL//ATSGT1B//SPA2//AtVGT1//AT1G52930//BRIZ2 GO:0016125 sterol metabolic process BP 0.0927781232813719 TUB6//PIP1;3//LAX3//ATCB5-B GO:1901362 organic cyclic compound biosynthetic pro... BP 0.0947814699934381 PSBT//RPS2//YCF6//PETA//PRL1//BARS1//AT5G62650//AtRLP54//AT5G39230//CYP724A1//TUB6//GIS//AT3G56340//AT3G48760//AtbZIP67//SAMC1//AT4G24200//AT4G18450//ATSGT1B//AT4G04880//IAA13//DDF1//BR6OX2//BBX31//ADOF2//AT3G06530//PIP1;3//AT1G28160//LAX3//AT1G52930//AT2G41710//EMB2733//RSL4//AT1G08310//AtPPsPase1//AT1G28680//APL//anac036//ATMYB38//AT1G05290//SNL4//AT1G27000//BP80-3;3//AT2G16800//AT2G20060//AGP16//AT2G38090//ATCB5-B GO:0022411 cellular component disassembly BP 0.0959861930419713 PUX1//AT3G02480 GO:0045786 negative regulation of cell cycle BP 0.0959861930419713 ATREV7//APC10 GO:0006721 terpenoid metabolic process BP 0.0967970270147249 BARS1//ATNCED2//DDF1//ATNCED3//BRIZ2//ATCB5-B GO:0050790 regulation of catalytic activity BP 0.0967970270147249 AT5G59100//PDE329//ATTRX//AT4G21323//AT4G18593//CYCB1;4 GO:0006928 movement of cell or subcellular componen... BP 0.0982092743790264 TUB6//ATNACK2//ATPLC2//ARK2 GO:0006508 proteolysis BP 0.0983529898086915 PRL1//ATREV7//AT5G59100//AT5G19110//TUB6//CSN6B//AT4G21323//ATSGT1B//scpl33//AT3G19400//AT1G77770//AT2G21430//AT1G09730//APC10//AT2G41980 GO:0032268 regulation of cellular protein metabolic... BP 0.100757810198315 ATREV7//AtRLP54//SAMC1//AT4G18593//APC10//CYCB1;4 GO:0034754 cellular hormone metabolic process BP 0.103785659407783 ATCKX3//BON2//ATMLH3//AGP16 GO:0044283 small molecule biosynthetic process BP 0.104029815911476 CYP724A1//AK//TUB6//AT3G48760//ATNCED2//ATSGT1B//IAA13//DDF1//BR6OX2//ATNCED3//AT-POX//AT3G19400//ADOF2//ATCYSD1//PIP1;3//LAX3//BP80-3;3//AT2G16800//CAC3//AGP16//BRIZ2//ATCB5-B GO:0009845 seed germination BP 0.104112194217757 PRL1//AtDSEL//ATSGT1B//AtVGT1//BRIZ2 GO:0009725 response to hormone BP 0.105580752891371 PRL1//ARAC10//AtRLP54//TUB6//GIS//LTI30//AT3G48760//AtbZIP67//ATPLDDELTA//AT4G18450//ATSGT1B//IAA13//ATNCED3//AT1G28160//LAX3//RSL4//ATSERK2//ATMYB38//ARL1//AT2G32090//NATA1//AT2G39540//ATEXP3 GO:0006520 cellular amino acid metabolic process BP 0.106977537230584 FOLB2//OVA6//AK//TUB6//EMB2369//IAA13//AT-POX//AT3G19400//ADOF2//ATCYSD1//AT2G16800//NATA1//AGP16 GO:0044092 negative regulation of molecular functio... BP 0.108705736766302 AT5G59100//AT4G21323//AT4G18593 GO:0051235 maintenance of location BP 0.108705736766302 PRL1//ATGRP-7//AtDSEL GO:0071396 cellular response to lipid BP 0.114049376416662 ARAC10//TUB6//AT3G48760//AtbZIP67//ATPLDDELTA//ATSERK2//AT1G12010 GO:0009962 regulation of flavonoid biosynthetic pro... BP 0.11536075338604 AT1G28570//AT1G28680//AT2G40270//BAN GO:0051246 regulation of protein metabolic process BP 0.11743775547436 ATREV7//AtRLP54//SAMC1//AT4G18593//APC10//CYCB1;4 GO:0009308 amine metabolic process BP 0.118672298126712 ATCKX3//BON2//BGAL3//ATMLH3//AGP16 GO:0006418 tRNA aminoacylation for protein translat... BP 0.118830352058399 OVA6//EMB2369 GO:0008643 carbohydrate transport BP 0.118830352058399 AtVGT1//ATSTP2 GO:0043038 amino acid activation BP 0.118830352058399 OVA6//EMB2369 GO:0043039 tRNA aminoacylation BP 0.118830352058399 OVA6//EMB2369 GO:0000097 sulfur amino acid biosynthetic process BP 0.121812315553533 TUB6//IAA13//AT3G19400//ADOF2//ATCYSD1//AT2G16800 GO:0090351 seedling development BP 0.123729445214047 PRL1//AtDSEL//ATSGT1B//AtVGT1//BRIZ2 GO:0071669 plant-type cell wall organization or bio... BP 0.13065047877524 ARAC10//ATGRP-7//AT3G56340//BGAL3//AT4G08370//AT3G02480//AGP11//ATGH9B1//ATEXP3 GO:0007067 mitotic nuclear division BP 0.130710925437602 ATREV7//APC10 GO:0009658 chloroplast organization BP 0.134138070752367 OVA6//EFO2//SAMC1//EMB2369//FIB4 GO:0016053 organic acid biosynthetic process BP 0.13648925477346 AK//TUB6//AT3G48760//ATNCED2//ATSGT1B//IAA13//DDF1//ATNCED3//AT-POX//AT3G19400//ADOF2//ATCYSD1//BP80-3;3//AT2G16800//CAC3//AGP16//BRIZ2 GO:0046394 carboxylic acid biosynthetic process BP 0.13648925477346 AK//TUB6//AT3G48760//ATNCED2//ATSGT1B//IAA13//DDF1//ATNCED3//AT-POX//AT3G19400//ADOF2//ATCYSD1//BP80-3;3//AT2G16800//CAC3//AGP16//BRIZ2 GO:0008610 lipid biosynthetic process BP 0.138688373449676 BARS1//CYP724A1//TUB6//ATNCED2//CLS//DDF1//BR6OX2//ATNCED3//PIP1;3//LAX3//AT1G08310//AtPPsPase1//AT2G32090//CAC3//BRIZ2//ATCB5-B GO:1901605 alpha-amino acid metabolic process BP 0.139091423570388 FOLB2//TUB6//IAA13//AT-POX//AT3G19400//ADOF2//ATCYSD1//AT2G16800//NATA1//AGP16 GO:0051093 negative regulation of developmental pro... BP 0.140098623705047 BBX1//AtDSEL//ATSGT1B//SPA2 GO:0065008 regulation of biological quality BP 0.143450198117874 PRL1//ATCKX3//CYP724A1//TUB6//BON2//ATGRP-7//AT5G03870//ATTRX//ATMLH3//AtDSEL//ACR11//BR6OX2//PIP1;3//LAX3//EMB2733//anac036//AT2G16800//AGP16 GO:0050793 regulation of developmental process BP 0.144080734919134 PRL1//BBX1//BGAL3//AtDSEL//ATSGT1B//SPA2//DDF1//AtVGT1//AT1G52930//AT1G33055//IQD31//APC10//BRIZ2 GO:0016043 cellular component organization BP 0.146113185181855 YCF6//PETA//PRL1//ATREV7//ATFH6//ATEB1C//ARAC10//OVA6//D6PKL2//AtRLP54//EFO2//TUB6//ATGRP-7//GIS//AT3G56340//PDE329//ATNACK2//SAMC1//BGAL3//ATMLH3//CSN6B//AT4G21323//ATSGT1B//AT4G08370//EMB2369//PUX1//FIB4//AT3G02480//AT3G09700//ATCYSD1//AGP11//LAX3//AT1G77770//AT1G52930//ATGH9B1//ATSTP2//RSL4//IQD31//AtPPsPase1//AT1G28570//anac036//AT2G40270//AT1G62480//ATNHX7//APC10//ATEXP3 GO:0048519 negative regulation of biological proces... BP 0.147554616810739 PRL1//ATREV7//BBX1//ARAC10//AT5G59100//AtRLP54//AT3G48760//AT4G21323//AT4G18593//AtDSEL//ATSGT1B//SPA2//EMB2733//AT1G08310//AtPPsPase1//AT2G40270//BAN//APC10//AT2G44830 GO:0010564 regulation of cell cycle process BP 0.148445775677381 PRL1//ATREV7//APC10 GO:0006833 water transport BP 0.153199084401109 TUB6//ATGRP-7//ACR11//PIP1;3