GOID	TERM	ONTOLOGY	pValue	Genes
GO:0006354	DNA-templated transcription, elongation	BP	0.000217368909660501	ORF31//RPOA//RPOC2//YCF6//PSAB//YCF10//AT2G20060//AT2G44065
GO:0043086	negative regulation of catalytic activit...	BP	0.00276622258183502	ARA12//AT5G59100//AT5G59130//AT5G58840//AT4G21323
GO:0044092	negative regulation of molecular functio...	BP	0.00504903508007062	ARA12//AT5G59100//AT5G59130//AT5G58840//AT4G21323
GO:0006508	proteolysis	BP	0.0106863646631948	AT5G19630//ARA12//AT5G59100//AT5G59130//AT5G58840//scpl41//SCPL19//AT5G07030//AT3G61540//AT4G33490//AT4G21323//ATSGT1B//PRT1//ACT8//MMZ3//AT1G67420//ATPMM//AT2G44065
GO:0050790	regulation of catalytic activity	BP	0.0119499835570246	AT5G28500//ARA12//AT5G59100//AT5G59130//AT5G58840//PDE329//ATTRX//AT4G21323
GO:0006766	vitamin metabolic process	BP	0.0126891991167554	PANB2//LTA2//AtGulLO2//ATPMM
GO:0044711	single-organism biosynthetic process	BP	0.0143985601643926	HO2//RCA//AT5G28500//AT-IE//ADG2//AtENODL17//AtEML3//AK//ATMYB46//AT5G11240//PANB2//AT3G61540//BAP1//AT3G56340//PDE329//PYRR//ATMDAR1//ATCYP1//SEP1//AT4G32120//AT4G13050//AT4G12600//ATSGT1B//AT4G04880//CLS//PIRL9//AT3G25660//CYP82G1//NDF4//LTA2//ALDH1A//AT3G06530//AT3G01660//AT3G11630//AtPEPC1//APG13//ACT8//AT1G48570//AT1G75900//AT1G28680//ATTPS1//BP80-3;3//AtGulLO2//ATSUC3//ATPMM//AT2G30930//AT2G23040//ATCB5-B//AT2G32640
GO:0015979	photosynthesis	BP	0.0147916987216719	ORF31//RPOA//RPOC2//YCF6//PSAB//YCF10//RCA//ADG2//SEP1//NDF4//AT3G11630
GO:0006767	water-soluble vitamin metabolic process	BP	0.0210140088624395	PANB2//AtGulLO2//ATPMM
GO:0042364	water-soluble vitamin biosynthetic proce...	BP	0.0210140088624395	PANB2//AtGulLO2//ATPMM
GO:0006091	generation of precursor metabolites and ...	BP	0.0217080958680666	ORF31//RPOA//RPOC2//YCF6//PSAB//YCF10//RCA//ADG2//ATMDAR1//ATCYP1//SEP1//NDF4//AT3G11630//ATPMM
GO:0009110	vitamin biosynthetic process	BP	0.024567735553917	PANB2//AtGulLO2//ATPMM
GO:0055086	nucleobase-containing small molecule met...	BP	0.0315505700095179	AT-IE//ADG2//AT5G11240//AT3G56340//PYRR//DUT1//SEP1//AT4G12600//AT4G04880//NDF4//LTA2//AT3G06530//ATNUDX26//AT1G48570
GO:0065009	regulation of molecular function	BP	0.0332035983787794	AT5G28500//ARA12//AT5G59100//AT5G59130//AT5G58840//PDE329//ATTRX//AT4G21323
GO:1901576	organic substance biosynthetic process	BP	0.0398416643351072	ORF31//RPOA//RPOC2//YCF6//PSAB//YCF10//HO2//RCA//AT4G14920//AT5G28500//AT-IE//AT4G36500//RECQSIM//GATA5//ATFLS3//AT5G51130//ASG7//ATERF-2//AtMYB22//ADG2//AtENODL17//AtEML3//AK//ATMYB46//AT5G11240//ATCBG//PANB2//AT3G61540//BAP1//AT3G56300//AT3G56340//PDE329//PYRR//ATMDAR1//DUT1//AT4G39140//ATCYP1//SEP1//AT4G32120//AT4G13050//AT4G12600//ATSGT1B//AT4G04880//CLS//ATBZIP10//UNE10//PIRL9//AT3G25660//AT3G20710//CYP82G1//NDF4//LTA2//AT3G24490//ALDH1A//AT3G06530//AT3G01660//AT3G11630//EDA30//HRS1//AtPEPC1//APG13//ACT8//AT1G48570//ARP4//AT1G75900//AT1G28680//ATTPS1//AT1G12010//AXR1//AT1G24430//BP80-3;3//IAA8//AT2G20060//AT2G25640//AT2G19740//AtGulLO2//ATSUC3//ATPMM//AT2G30930//AT2G44065//AT2G23040//ATCB5-B//AT2G32640
GO:0008299	isoprenoid biosynthetic process	BP	0.040267615046985	HO2//SEP1//CYP82G1//NDF4//LTA2//AT3G11630//AT2G23040//ATCB5-B//AT2G32640
GO:0006753	nucleoside phosphate metabolic process	BP	0.0429191006015401	AT-IE//ADG2//AT5G11240//AT3G56340//DUT1//SEP1//AT4G12600//AT4G04880//NDF4//LTA2//AT3G06530//ATNUDX26//AT1G48570
GO:0019684	photosynthesis, light reaction	BP	0.0439594706438619	ORF31//PSAB//YCF10//RCA//ADG2//SEP1//NDF4//AT3G11630
GO:0009893	positive regulation of metabolic process	BP	0.0483598297780538	AT5G28500//AT4G36500//GATA5//AT5G51130//ATERF-2//ATMYB46//PDE329//ATTRX//ATBZIP10//AT3G24490//APG13//AT1G28680//AXR1//AT2G30930
GO:1903046	meiotic cell cycle process	BP	0.0514701064183082	ATNACK2//AT3G20710//AT1G72270//ARP4//AT1G67420
GO:0090407	organophosphate biosynthetic process	BP	0.0541373591784941	HO2//AT-IE//AT5G11240//AT3G56340//SEP1//AT4G12600//AT4G04880//CLS//AT3G25660//NDF4//LTA2//AT3G06530//AT3G11630//AT1G48570
GO:0006720	isoprenoid metabolic process	BP	0.0553381416735349	HO2//SEP1//CYP82G1//NDF4//LTA2//AT3G11630//AT2G23040//ATCB5-B//AT2G32640
GO:0030865	cortical cytoskeleton organization	BP	0.0563273997166223	ATEB1C//PLP3b
GO:0019288	isopentenyl diphosphate biosynthetic pro...	BP	0.058176448271567	HO2//SEP1//NDF4//LTA2//AT3G11630
GO:0072527	pyrimidine-containing compound metabolic...	BP	0.058176448271567	AT5G11240//PYRR//DUT1//AT3G06530//AT1G48570
GO:0090305	nucleic acid phosphodiester bond hydroly...	BP	0.0612745835139854	AT5G11240//AT3G20710//AT1G72270//AT1G67420
GO:0009058	biosynthetic process	BP	0.0637472707680355	ORF31//RPOA//RPOC2//YCF6//PSAB//YCF10//HO2//RCA//AT4G14920//AT5G28500//AT-IE//AT4G36500//RECQSIM//GATA5//ATFLS3//AT5G51130//ASG7//ATERF-2//AtMYB22//ADG2//AtENODL17//AtEML3//AK//ATMYB46//AT5G11240//ATCBG//PANB2//AT3G61540//BAP1//AT3G56300//AT3G56340//PDE329//PYRR//ATMDAR1//DUT1//AT4G39140//ATCYP1//SEP1//AT4G32120//AT4G13050//AT4G12600//ATSGT1B//AT4G04880//CLS//ATBZIP10//UNE10//PIRL9//AT3G25660//AT3G20710//CYP82G1//NDF4//LTA2//AT3G24490//ALDH1A//AT3G06530//AT3G01660//AT3G11630//EDA30//HRS1//AtPEPC1//APG13//ACT8//AT1G48570//ARP4//ATCOX6B2//AT1G75900//AT1G28680//ATTPS1//AT1G12010//AXR1//AT1G24430//BP80-3;3//IAA8//AT2G20060//AT2G25640//AT2G19740//AtGulLO2//ATSUC3//ATPMM//AT2G30930//AT2G44065//AT2G23040//ATCB5-B//AT2G32640
GO:0009240	isopentenyl diphosphate biosynthetic pro...	BP	0.0653603192009737	HO2//SEP1//NDF4//LTA2//AT3G11630
GO:0046490	isopentenyl diphosphate metabolic proces...	BP	0.0653603192009737	HO2//SEP1//NDF4//LTA2//AT3G11630
GO:0033554	cellular response to stress	BP	0.0654924237416507	RCA//AT4G36500//RECQSIM//ATFLS3//PYRR//DUT1//PPI1//ATSGT1B//ATBZIP10//ALDH1A//AT3G11630//HRS1//AtPEPC1//AT1G72270//AT1G28680//MMZ3//ATRAD51B//AT1G67420//AT1G10050//AXR1//BP80-3;3//AT2G30930
GO:0044281	small molecule metabolic process	BP	0.0679052049232081	HO2//RCA//AT-IE//AT5G47970//ADG2//AtENODL17//AK//AT5G11240//PANB2//AT3G61540//BAP1//AT3G56300//AT3G56340//PYRR//ATMDAR1//ATTRX//DUT1//ATCYP1//SEP1//AT4G32120//AT4G13050//AT4G12600//ATSGT1B//AT4G04880//PIRL9//NDF4//LTA2//AT3G06530//ATNUDX26//AT3G11630//AT1G48570//EDA17//AT1G75900//AT2G36950//BP80-3;3//AtGulLO2//ATSUC3//AT2G26800//ATPMM//AT2G30930//ATCB5-B
GO:0044710	single-organism metabolic process	BP	0.0688269753817808	HO2//RCA//AT5G28500//AT-IE//BGAL16//AT5G16960//RECQSIM//ATEB1C//AT5G51130//AT5G47970//ASG7//ATERF-2//ADG2//AtENODL17//AtEML3//AK//ATMYB46//AT5G11240//SCPL19//AT5G04550//PANB2//AT3G61540//BAP1//AT3G56300//AT3G56340//PDE329//PYRR//ATMDAR1//ATTRX//DUT1//ATCYP1//SEP1//AT4G33870//AT4G32120//AT4G13050//AT4G12600//ATSGT1B//AT4G04880//CLS//PIRL9//AT3G25660//AT3G20710//CYP82G1//NDF4//LTA2//ALDH1A//AT3G06530//AT3G06990//ATNUDX26//AT3G01660//AT3G11630//AtPEPC1//AT1G72270//APG13//ACT8//AT1G48570//ARP4//ATCOX6B2//EDA17//AT1G75900//AT1G28680//ATTPS1//AT2G36950//MMZ3//ATRAD51B//AT1G67420//AT1G12010//ATGSTU17//AXR1//BP80-3;3//AtGulLO2//ATSUC3//AT2G26800//ATPMM//AT2G30930//AT2G02630//AT2G23040//AT2G45630//ATCB5-B//AT2G32640
GO:0048518	positive regulation of biological proces...	BP	0.0703185878659813	AT5G28500//AT4G36500//GATA5//AT5G65290//AT5G51130//ATERF-2//AtEML3//ATMYB46//PDE329//ATTRX//ATBZIP10//AT3G24490//APG13//ARP4//AT1G28680//AT1G67420//AXR1//AT2G30930
GO:0008654	phospholipid biosynthetic process	BP	0.0740752161601539	HO2//SEP1//CLS//AT3G25660//NDF4//LTA2//AT3G11630
GO:0007127	meiosis I	BP	0.0752098092164733	AT3G20710//AT1G72270//ARP4//AT1G67420
GO:0007131	reciprocal meiotic recombination	BP	0.0752098092164733	AT3G20710//AT1G72270//ARP4//AT1G67420
GO:0035825	reciprocal DNA recombination	BP	0.0752098092164733	AT3G20710//AT1G72270//ARP4//AT1G67420
GO:0010155	regulation of proton transport	BP	0.0762050515456272	RCA//SEP1//PPI1
GO:0009773	photosynthetic electron transport in pho...	BP	0.0762658922229206	SEP1//NDF4
GO:0007010	cytoskeleton organization	BP	0.0790979798043671	ATFH6//ATEB1C//PLP3b//ARAC10//ATNACK2//LTA2//ACT8//IAA8//AT2G46560//ATPMM
GO:0019748	secondary metabolic process	BP	0.0790979798043671	SCPL19//NDF4//LTA2//ALDH1A//AT3G11630//AT1G75900//AT1G28680//AT2G36950//ATGSTU17//AT2G30930
GO:0044249	cellular biosynthetic process	BP	0.0795122877011107	ORF31//RPOA//RPOC2//YCF6//PSAB//YCF10//HO2//RCA//AT4G14920//AT5G28500//AT-IE//RECQSIM//GATA5//AT5G51130//ASG7//ATERF-2//AtMYB22//ADG2//AtEML3//AK//ATMYB46//AT5G11240//ATCBG//PANB2//AT3G61540//BAP1//AT3G56300//AT3G56340//PDE329//PYRR//DUT1//AT4G39140//SEP1//AT4G32120//AT4G13050//AT4G12600//ATSGT1B//AT4G04880//CLS//ATBZIP10//UNE10//AT3G25660//AT3G20710//CYP82G1//NDF4//LTA2//AT3G24490//ALDH1A//AT3G06530//AT3G01660//AT3G11630//EDA30//HRS1//AtPEPC1//APG13//AT1G48570//ARP4//ATCOX6B2//AT1G75900//AT1G28680//ATTPS1//AT1G12010//AXR1//AT1G24430//BP80-3;3//IAA8//AT2G20060//AT2G25640//AT2G19740//AtGulLO2//ATSUC3//ATPMM//AT2G30930//AT2G44065//AT2G23040//ATCB5-B//AT2G32640
GO:0006090	pyruvate metabolic process	BP	0.0801427569529931	HO2//ATMDAR1//ATCYP1//SEP1//NDF4//LTA2//AT3G11630//ATPMM
GO:0006997	nucleus organization	BP	0.0828570493116717	PLP3b//ATSUN2//EDA30
GO:0009553	embryo sac development	BP	0.0853854648129654	ATNACK2//EDA30//AT1G69210//ARP4//EDA17
GO:0046364	monosaccharide biosynthetic process	BP	0.0853854648129654	ATMDAR1//ATCYP1//ACT8//AtGulLO2//ATPMM
GO:0006310	DNA recombination	BP	0.0856355496878048	RECQSIM//AT3G20710//AT1G72270//ARP4//ATRAD51B//AT1G67420
GO:0009891	positive regulation of biosynthetic proc...	BP	0.0879751939949806	AT4G36500//GATA5//AT5G51130//ATERF-2//ATMYB46//ATBZIP10//AT3G24490//APG13//AT1G28680//AXR1//AT2G30930
GO:0008610	lipid biosynthetic process	BP	0.0891820589830465	HO2//AtENODL17//SEP1//AT4G13050//CLS//PIRL9//AT3G25660//CYP82G1//NDF4//LTA2//AT3G11630//AtPEPC1//AT2G23040//ATCB5-B//AT2G32640
GO:0045454	cell redox homeostasis	BP	0.0897493275888284	PLP3b//ATTRX//AT4G33040
GO:0009561	megagametogenesis	BP	0.0906001531003399	ATNACK2//EDA30//AT1G69210//ARP4
GO:0033044	regulation of chromosome organization	BP	0.0906001531003399	AT3G20710//AT1G72270//ARP4//AT1G67420
GO:0019637	organophosphate metabolic process	BP	0.0921210689866421	HO2//AT-IE//ADG2//AT5G11240//AT3G56340//DUT1//SEP1//AT4G12600//AT4G04880//CLS//AT3G25660//NDF4//LTA2//AT3G06530//ATNUDX26//AT3G11630//AT1G48570
GO:0044550	secondary metabolite biosynthetic proces...	BP	0.0971706031894328	NDF4//ALDH1A//AT3G11630//AT1G75900//AT1G28680//AT2G30930
GO:0009744	response to sucrose	BP	0.0987820030147595	RCA//SEP1//ATL8//AtTMT1//BP80-3;3
GO:0042592	homeostatic process	BP	0.101349797288094	PLP3b//ATCBG//BAP1//ATTRX//AT4G33040//NDF4//AT1G72270//AT1G67420//AXR1
GO:0006220	pyrimidine nucleotide metabolic process	BP	0.101632625815145	AT5G11240//DUT1//AT3G06530//AT1G48570
GO:0009963	positive regulation of flavonoid biosynt...	BP	0.104218659637937	AT4G36500//AT1G28680//AT2G30930
GO:0042254	ribosome biogenesis	BP	0.104285657172348	ADG2//AT5G11240//AT3G56340//SEP1//AT4G12600//APG13//AT2G19740
GO:0006974	cellular response to DNA damage stimulus	BP	0.108002467572023	RECQSIM//DUT1//AT1G72270//MMZ3//ATRAD51B//AT1G67420//AXR1
GO:0034285	response to disaccharide	BP	0.108267679341868	RCA//SEP1//ATL8//AtTMT1//BP80-3;3
GO:0006081	cellular aldehyde metabolic process	BP	0.10845542897372	HO2//AT5G47970//ADG2//SEP1//NDF4//LTA2//ATNUDX26//AT3G11630
GO:0055046	microgametogenesis	BP	0.109515283806877	PIRL9//ARP4
GO:0022613	ribonucleoprotein complex biogenesis	BP	0.111789680254193	ADG2//AT5G11240//AT3G56340//SEP1//AT4G12600//APG13//AT2G19740
GO:0016144	S-glycoside biosynthetic process	BP	0.113252809190368	NDF4//AT3G11630//AT1G75900//AT2G30930
GO:0019758	glycosinolate biosynthetic process	BP	0.113252809190368	NDF4//AT3G11630//AT1G75900//AT2G30930
GO:0019761	glucosinolate biosynthetic process	BP	0.113252809190368	NDF4//AT3G11630//AT1G75900//AT2G30930
GO:0042138	meiotic DNA double-strand break formatio...	BP	0.119538678194378	AT3G20710//AT1G72270//AT1G67420
GO:0007018	microtubule-based movement	BP	0.121315453799469	ATNACK2//ARK2
GO:0034470	ncRNA processing	BP	0.122578154496368	AT5G47970//ADG2//AT5G11240//SEP1//AT4G12600//APG13
GO:1901293	nucleoside phosphate biosynthetic proces...	BP	0.123567627194368	AT-IE//AT5G11240//AT3G56340//AT4G12600//AT4G04880//AT3G06530//AT1G48570
GO:0072528	pyrimidine-containing compound biosynthe...	BP	0.125431837436678	AT5G11240//PYRR//AT3G06530//AT1G48570
GO:0009595	detection of biotic stimulus	BP	0.127493718766525	RCA//ATSGT1B//AT3G11630
GO:0016129	phytosteroid biosynthetic process	BP	0.127493718766525	AtENODL17//PIRL9//LTA2
GO:0016132	brassinosteroid biosynthetic process	BP	0.127493718766525	AtENODL17//PIRL9//LTA2
GO:0005984	disaccharide metabolic process	BP	0.128510565535	AT5G28500//BGAL16//PDE329//AT3G01660//ATTPS1
GO:0048285	organelle fission	BP	0.131712047260208	PLP3b//AT3G20710//AT1G72270//APG13//ARP4//AT1G67420
GO:0008643	carbohydrate transport	BP	0.133408918580163	ATSTP2//ATSUC3
GO:0016572	histone phosphorylation	BP	0.133408918580163	ATEB1C//ARP4
GO:0019932	second-messenger-mediated signaling	BP	0.133408918580163	CLS//ATPMM
GO:0009695	jasmonic acid biosynthetic process	BP	0.135632457904463	BAP1//LTA2//ATSUC3
GO:0019725	cellular homeostasis	BP	0.136398471341975	PLP3b//ATCBG//BAP1//ATTRX//AT4G33040//NDF4
GO:0009117	nucleotide metabolic process	BP	0.138348325795531	AT-IE//ADG2//AT5G11240//AT3G56340//DUT1//SEP1//AT4G12600//NDF4//LTA2//AT3G06530//AT1G48570
GO:0034660	ncRNA metabolic process	BP	0.140216370399762	AT5G47970//ADG2//AT5G11240//AT3G56300//SEP1//AT4G12600//APG13
GO:0000003	reproduction	BP	0.141529179268709	ARA12//ATNACK2//ATBZIP10//UNE10//AT3G20710//AT1G72270//AT1G69210//ARP4//AT1G75900//AT1G67420//IAA8
GO:0009637	response to blue light	BP	0.14394509255023	RCA//ADG2//SEP1
GO:0016128	phytosteroid metabolic process	BP	0.14394509255023	AtENODL17//PIRL9//LTA2
GO:0016131	brassinosteroid metabolic process	BP	0.14394509255023	AtENODL17//PIRL9//LTA2
GO:0010243	response to organonitrogen compound	BP	0.144541884875787	RCA//ATERF-2//BAP1//ATSGT1B//AT3G11630//ATGSTU17//ATSUC3
GO:0051321	meiotic cell cycle	BP	0.144743906946804	ATNACK2//AT3G20710//AT1G72270//ARP4//AT1G67420
GO:1901362	organic cyclic compound biosynthetic pro...	BP	0.148798419990132	ORF31//RPOA//RPOC2//YCF6//PSAB//YCF10//HO2//RCA//AT4G14920//AT-IE//GATA5//AT5G51130//ATERF-2//AtMYB22//AtENODL17//ATMYB46//AT5G11240//AT3G56340//PYRR//SEP1//AT4G12600//ATSGT1B//AT4G04880//ATBZIP10//UNE10//PIRL9//AT3G20710//LTA2//AT3G24490//ALDH1A//AT3G06530//AT3G11630//HRS1//AtPEPC1//APG13//AT1G48570//ARP4//AT1G28680//AXR1//BP80-3;3//IAA8//AT2G20060//AT2G25640//AT2G44065//ATCB5-B
GO:1901135	carbohydrate derivative metabolic proces...	BP	0.149784578060561	HO2//ASG7//ADG2//AT5G11240//PYRR//DUT1//SEP1//AT4G32120//AT4G04880//NDF4//LTA2//AT3G06530//AT3G11630//AtPEPC1//AT1G48570//AT1G75900//AT2G30930
GO:0016036	cellular response to phosphate starvatio...	BP	0.152421810003265	PYRR//HRS1//AtPEPC1
GO:0006644	phospholipid metabolic process	BP	0.153382545167731	HO2//SEP1//CLS//AT3G25660//NDF4//LTA2//AT3G11630
GO:0006364	rRNA processing	BP	0.156033982085991	ADG2//AT5G11240//SEP1//AT4G12600//APG13
GO:0016072	rRNA metabolic process	BP	0.156033982085991	ADG2//AT5G11240//SEP1//AT4G12600//APG13
GO:0006694	steroid biosynthetic process	BP	0.158115581956708	AtENODL17//PIRL9//LTA2//ATCB5-B
GO:0009612	response to mechanical stimulus	BP	0.158335197669166	ATEB1C//BAP1
GO:0009734	auxin-activated signaling pathway	BP	0.158335197669166	ATSGT1B//AXR1
GO:0016579	protein deubiquitination	BP	0.158335197669166	AT5G51130//AXR1