GOID TERM ONTOLOGY pValue Genes GO:0043622 cortical microtubule organization BP 0.00110843758426493 PLP3b//MIDD1//ANP3 GO:0031122 cytoplasmic microtubule organization BP 0.00137015673985605 PLP3b//MIDD1//ANP3 GO:0030865 cortical cytoskeleton organization BP 0.00200251684298634 PLP3b//MIDD1//ANP3 GO:0043473 pigmentation BP 0.00789540021332735 AGL68//ABS//BAM3//ATPIN7 GO:0043476 pigment accumulation BP 0.00789540021332735 AGL68//ABS//BAM3//ATPIN7 GO:0043478 pigment accumulation in response to UV l... BP 0.00789540021332735 AGL68//ABS//BAM3//ATPIN7 GO:0043479 pigment accumulation in tissues in respo... BP 0.00789540021332735 AGL68//ABS//BAM3//ATPIN7 GO:0043480 pigment accumulation in tissues BP 0.00789540021332735 AGL68//ABS//BAM3//ATPIN7 GO:0043481 anthocyanin accumulation in tissues in r... BP 0.00789540021332735 AGL68//ABS//BAM3//ATPIN7 GO:0009610 response to symbiotic fungus BP 0.00853806191764359 SSP4//AT1G16210//ATNFXL1 GO:0009608 response to symbiont BP 0.0094185161994517 SSP4//AT1G16210//ATNFXL1 GO:0009411 response to UV BP 0.0142853427294997 AGL68//ABS//BAM3//ATMAPK6//ATXPD//ATPIN7 GO:0043648 dicarboxylic acid metabolic process BP 0.0157903297285103 ATLOG9//AT5G58330//PMDH2 GO:0048440 carpel development BP 0.0205132542770297 OVA9//RXF26//AGL68//ABS//JGL//ATMAPK6 GO:0007005 mitochondrion organization BP 0.0237839378316998 ATIPK2BETA//ATTOC34//POLGAMMA2//AT2G19080 GO:0009292 genetic transfer BP 0.0239447974518574 NAP1;3//ATXR5 GO:0009294 DNA mediated transformation BP 0.0239447974518574 NAP1;3//ATXR5 GO:0048467 gynoecium development BP 0.0245877150119352 OVA9//RXF26//AGL68//ABS//JGL//ATMAPK6 GO:1902532 negative regulation of intracellular sig... BP 0.0268704348663736 ERS//AT4G18593 GO:0000023 maltose metabolic process BP 0.0295318459689643 AT5G58330//AT3G18500//ATATP-PRT2//AT2G23390 GO:0005982 starch metabolic process BP 0.0349062973678792 AT5G58330//AT3G18500//AT3G01810//ATATP-PRT2//AT2G23390 GO:0009814 defense response, incompatible interacti... BP 0.0408916169397621 PMDH2//ATCS-C//SOBER1//ATCAT3//AT1G55210//ATMAPK6//AT1G54320//ATMES7//UGT87A2 GO:0034976 response to endoplasmic reticulum stress BP 0.0420357146078 ATCS-C//AT1G17860//ATFKBP62//AT3G28450//AT1G55210//ATMAPK6//UGT87A2 GO:0009627 systemic acquired resistance BP 0.0423578760111161 PMDH2//ATCS-C//ATCAT3//AT1G55210//ATMAPK6//AT1G54320//ATMES7//UGT87A2 GO:0005975 carbohydrate metabolic process BP 0.0431184223729764 GPDHC1//ATIPK2BETA//AT5G58330//AT5G51830//AT5G22470//PMDH2//IQD13//AT4G32760//BAM3//ATSK21//GAUT9//AT3G18500//AT3G01810//AT1G73740//BGLU36//AtGH9C1//AT2G25300//ATATP-PRT2//ATPIN7//CVL1//AtGulLO5//AT2G23390 GO:0035670 plant-type ovary development BP 0.0464242927202392 OVA9//RXF26//ABS//ATMAPK6 GO:0048481 ovule development BP 0.0464242927202392 OVA9//RXF26//ABS//ATMAPK6 GO:0046164 alcohol catabolic process BP 0.0471200641833964 UGT71B6//CVL1 GO:0046434 organophosphate catabolic process BP 0.0471200641833964 GPDHC1//CVL1 GO:1902531 regulation of intracellular signal trans... BP 0.0471200641833964 ERS//AT4G18593 GO:0009926 auxin polar transport BP 0.0486298533992899 ZIFL1//AT5G01990//ATPIN7 GO:0009825 multidimensional cell growth BP 0.0508813231586027 BAM3//ATSK21//ATPIN7 GO:0072503 cellular divalent inorganic cation homeo... BP 0.050902432534209 ACA4//ATGLR1.2 GO:0060918 auxin transport BP 0.0531827193271206 ZIFL1//AT5G01990//ATPIN7 GO:0019321 pentose metabolic process BP 0.0547898766683378 ATIPK2BETA//AT5G51830 GO:0009914 hormone transport BP 0.0555335616242694 ZIFL1//AT5G01990//ATPIN7 GO:0009314 response to radiation BP 0.0580014926183592 OVA9//AGL68//ATGLR1.2//ABS//PMDH2//BAM3//AT1G17860//ATFKBP62//ATCAT3//ATMAPK6//AtJ8//AT2G36480//ATXPD//ATNFXL1//ATPIN7//AT2G23390 GO:0044764 multi-organism cellular process BP 0.0587783735545324 NAP1;3//ATXR5 GO:0006626 protein targeting to mitochondrion BP 0.0603815644527111 ATIPK2BETA//ATTOC34//AT2G19080 GO:0043085 positive regulation of catalytic activit... BP 0.0603815644527111 AT5G58330//PMDH2//AT2G23390 GO:0044093 positive regulation of molecular functio... BP 0.0603815644527111 AT5G58330//PMDH2//AT2G23390 GO:0070585 protein localization to mitochondrion BP 0.0603815644527111 ATIPK2BETA//ATTOC34//AT2G19080 GO:0072655 establishment of protein localization to... BP 0.0603815644527111 ATIPK2BETA//ATTOC34//AT2G19080 GO:1901616 organic hydroxy compound catabolic proce... BP 0.0628639968504013 UGT71B6//CVL1 GO:0010075 regulation of meristem growth BP 0.0638575806675222 BAM3//AT3G01810//ATMAP70-1//AT1G51570 GO:0019252 starch biosynthetic process BP 0.0638575806675222 AT5G58330//AT3G18500//ATATP-PRT2//AT2G23390 GO:0009416 response to light stimulus BP 0.0694223649840538 OVA9//AGL68//ATGLR1.2//ABS//PMDH2//BAM3//AT1G17860//ATFKBP62//ATCAT3//ATMAPK6//AtJ8//ATXPD//ATNFXL1//ATPIN7//AT2G23390 GO:0010817 regulation of hormone levels BP 0.073413681553884 ILL3//ZIFL1//AT5G01990//ATCS-C//BAM3//ATPIN7//ATIPT2 GO:0035266 meristem growth BP 0.0778338600925247 BAM3//AT3G01810//ATMAP70-1//AT1G51570 GO:0072507 divalent inorganic cation homeostasis BP 0.0801025015368506 ACA4//ATGLR1.2 GO:0044723 single-organism carbohydrate metabolic p... BP 0.0809245882161946 ATIPK2BETA//AT5G58330//AT5G51830//AT5G22470//IQD13//AT4G32760//BAM3//ATSK21//GAUT9//AT3G18500//AT1G73740//AT2G25300//ATATP-PRT2//ATPIN7//CVL1//AtGulLO5//AT2G23390 GO:0009059 macromolecule biosynthetic process BP 0.0838277364459482 GATA26//OVA9//PSRP5//ATIPK2BETA//AT5G58330//LRL3//AT5G24510//ABS//AT5G22470//anac084//ATXR5//PMDH2//LUL1//IQD13//AT3G54290//BEH1//AtMYB45//AT4G32760//BAM3//anac071//AT4G11160//AT1G18070//POLGAMMA2//AT3G12130//ETC1//AT3G18500//ATFKBP62//AtMYB110//AT3G21680//ANP3//AT1G04800//AT1G14220//AT2G25300//AT1G04480//AT2G36480//ATXPD//AT1G11950//ATNFXL1//ATATP-PRT2//ATPIN7//AT2G13840//AT2G23390 GO:0080147 root hair cell development BP 0.0864528043237598 LRL3//BAM3//ATSK21//ATPIN7 GO:0044710 single-organism metabolic process BP 0.0913765151496406 GPDHC1//ACA4//OVA9//RXF26//PSRP5//AtFAR6//AT1G57770//ATLOG9//ATIPK2BETA//CYP89A3//ATTMPK.1//AT5G58330//NAP1;3//AT5G51830//ATGLR1.2//ABS//AT5G22470//ATXR5//PMDH2//AT5G06580//IQD13//ATCS-C//AtSDIR1//AT3G54290//ALDH10A9//AT4G32760//BAM3//ATSK21//AT4G18593//AT4G11160//AT1G19230//AT1G18180//GAUT9//CYP705A33//AT3G18500//UGT71B6//ANP3//ACR6//ATCAT3//AT1G20490//AT1G20410//AT1G55210//AT1G73740//AT1G51570//ATMAPK6//ATCK1//AT1G01980//AT1G54320//AT2G25300//AT2G36480//AT2G22530//ATXPD//ATNFXL1//ATATP-PRT2//ATPIN7//AT2G20920//CVL1//SDR2//ATIPT2//AtGulLO5//ATMES7//AT2G23390//UGT87A2 GO:0051704 multi-organism process BP 0.0932353380724219 ACA4//NAP1;3//SSP4//LAZ5//ABS//AT5G22840//ATXR5//PMDH2//ATGRP-6//ATCS-C//SOBER1//ATCAT3//AT1G55210//ATROPGEF12//ATMAPK6//ATCK1//AT1G52680//AtRLP3//AT1G16210//AT1G54320//ATNFXL1//ATMES7//UGT87A2 GO:0006464 cellular protein modification process BP 0.0961936978862801 ERS//OVA9//SSP4//AT5G22840//AT5G22470//ATXR5//PMDH2//LUL1//AtSDIR1//AT3G54290//AT4G32760//CRK21//BAM3//ATSK21//AT4G18593//AT4G11160//ATFKBP62//AT3G28450//AT3G21680//ANP3//AT1G20410//AT1G77550//AT1G07560//AT1G04800//AT1G14220//AT2G25300//ATXPD//AT2G43230//AT2G23390 GO:0036211 protein modification process BP 0.0961936978862801 ERS//OVA9//SSP4//AT5G22840//AT5G22470//ATXR5//PMDH2//LUL1//AtSDIR1//AT3G54290//AT4G32760//CRK21//BAM3//ATSK21//AT4G18593//AT4G11160//ATFKBP62//AT3G28450//AT3G21680//ANP3//AT1G20410//AT1G77550//AT1G07560//AT1G04800//AT1G14220//AT2G25300//ATXPD//AT2G43230//AT2G23390 GO:0005984 disaccharide metabolic process BP 0.0978493370116918 AT5G58330//AT3G18500//ATATP-PRT2//AT2G23390 GO:0006891 intra-Golgi vesicle-mediated transport BP 0.0986047457628405 AT1G16560//AT4G32760 GO:0007389 pattern specification process BP 0.100761505247482 BAM3//JGL//ATMAP70-1//ATMAPK6//ATPIN7//CVL1 GO:0042542 response to hydrogen peroxide BP 0.102595815107968 AT1G17860//ATFKBP62//ATMAPK6//ATXPD GO:0065007 biological regulation BP 0.104372315478651 ERS//ACA4//GATA26//OVA9//PLP3b//AGL68//ATIPK2BETA//AT5G58330//LRL3//ILL3//ATGLR1.2//LAZ5//AT5G42140//ABS//anac084//ZIFL1//ATXR5//PMDH2//ATGRP-6//AT5G01990//ATCS-C//AtSDIR1//BEH1//AtMYB45//SOBER1//BAM3//ATSK21//AT4G18593//anac071//AT4G11160//AT3G12130//ETC1//AT3G28450//UGT71B6//AtMYB110//ANP3//AT3G01810//ATCAT3//AT1G20410//ATMAP70-1//CLE12//ATROPGEF12//AT1G51570//ATMAPK6//AtRLP3//AT1G16210//AT2G36480//ATXPD//AT1G11950//ATNFXL1//ATPIN7//ATIPT2//AtGulLO5//AT2G23390//UGT87A2 GO:0006913 nucleocytoplasmic transport BP 0.105008317925583 ATTOC34//ATSK21//AT1G77550//AT2G19080 GO:0051169 nuclear transport BP 0.105008317925583 ATTOC34//ATSK21//AT1G77550//AT2G19080 GO:0009415 response to water BP 0.106088391327777 GPDHC1//AtSAD1//ATGLR1.2//ZIFL1//AtSDIR1//ALDH10A9//UGT71B6 GO:0048437 floral organ development BP 0.108709134818293 OVA9//RXF26//AGL68//ABS//BAM3//JGL//AT1G20410//ATMAPK6 GO:0051239 regulation of multicellular organismal p... BP 0.110523130553526 OVA9//AGL68//BAM3//AT3G01810//AT1G20410//ATMAP70-1//ATROPGEF12//AT1G51570//ATMAPK6//UGT87A2 GO:0048638 regulation of developmental growth BP 0.112846386919389 BAM3//AT3G01810//ATMAP70-1//ATROPGEF12//AT1G51570 GO:0006334 nucleosome assembly BP 0.11318428343153 NAP1;3//AT1G17520 GO:0034728 nucleosome organization BP 0.11318428343153 NAP1;3//AT1G17520 GO:0048438 floral whorl development BP 0.114088457871244 OVA9//RXF26//AGL68//ABS//BAM3//JGL//ATMAPK6 GO:0071704 organic substance metabolic process BP 0.116622855557911 ERS//GPDHC1//ACA4//GCP1//GATA26//OVA9//RXF26//PSRP5//AT1G57770//ATLOG9//ATIPK2BETA//ATTMPK.1//AT5G58330//LRL3//NAP1;3//ILL3//AT5G51830//ATGLR1.2//SSP4//AT5G24510//ABS//AT5G22840//AT5G22470//anac084//AT5G10770//AT5G10620//ATXR5//PMDH2//AT5G06580//LUL1//IQD13//ATCS-C//AtSDIR1//AT3G54290//BEH1//AtMYB45//AT4G32760//AT4G24300//CRK21//BAM3//ATSK21//AT4G18593//anac071//AT4G11160//AT1G17860//AT1G18070//AT1G18180//POLGAMMA2//AT3G12130//GAUT9//ETC1//AT3G18500//ATFKBP62//AT3G28450//UGT71B6//AtMYB110//AT3G21680//ANP3//ACR6//AT3G01810//ATCAT3//AT1G20490//AT1G20410//AT1G55210//AT1G77550//AT1G73740//AT1G51570//BGLU36//ATMAPK6//AT1G17520//AtGH9C1//AT1G07560//AT1G04800//CLB19//ATCK1//AtJ8//AT1G14220//AT1G16210//AT1G54320//AT2G25300//AT1G04480//AT2G36480//AT2G22530//ATXPD//AT1G11950//ATNFXL1//ATATP-PRT2//ATPIN7//AT2G20920//AT2G13840//CVL1//ATIPT2//AT2G43230//AtGulLO5//ATMES7//AT2G23390//AT2G19080 GO:0065004 protein-DNA complex assembly BP 0.118161769325558 NAP1;3//AT1G17520 GO:0071824 protein-DNA complex subunit organization BP 0.118161769325558 NAP1;3//AT1G17520 GO:0006839 mitochondrial transport BP 0.121908356239339 ATIPK2BETA//ATTOC34//AT2G19080 GO:0065009 regulation of molecular function BP 0.123521088950632 AT5G58330//PMDH2//AT4G18593//AtGulLO5//AT2G23390 GO:0033554 cellular response to stress BP 0.123815665671001 NAP1;3//ATGLR1.2//LAZ5//PMDH2//ATCS-C//AtSDIR1//SOBER1//AT1G17860//ATFKBP62//AT3G28450//ATCAT3//AT1G55210//ATMAPK6//AT2G36480//ATXPD//UGT87A2 GO:0045087 innate immune response BP 0.123902594067971 LAZ5//PMDH2//ATCS-C//SOBER1//ATCAT3//AT1G55210//ATMAPK6//AtRLP3//AT1G54320//ATMES7//UGT87A2 GO:0042435 indole-containing compound biosynthetic ... BP 0.125263540984908 ATCS-C//AT1G51570//ATMAPK6 GO:0044249 cellular biosynthetic process BP 0.125803488524323 ACA4//GATA26//OVA9//PSRP5//AT1G57770//ATLOG9//ATIPK2BETA//ATTMPK.1//AT5G58330//LRL3//ATGLR1.2//AT5G24510//ABS//AT5G22470//anac084//ATXR5//PMDH2//LUL1//IQD13//ATCS-C//AtSDIR1//AT3G54290//BEH1//AtMYB45//AT4G32760//anac071//AT4G11160//AT1G18070//POLGAMMA2//AT3G12130//ETC1//AT3G18500//ATFKBP62//AtMYB110//AT3G21680//ANP3//ACR6//ATCAT3//AT1G55210//AT1G73740//AT1G80380//AT1G51570//ATMAPK6//AT1G04800//ATCK1//AT1G14220//AT1G54320//AT2G25300//AT1G04480//AT2G36480//AT2G22530//ATXPD//AT1G11950//ATNFXL1//ATATP-PRT2//AT2G13840//ATIPT2//AtGulLO5//AT2G23390 GO:0006955 immune response BP 0.126433377027102 LAZ5//PMDH2//ATCS-C//SOBER1//ATCAT3//AT1G55210//ATMAPK6//AtRLP3//AT1G54320//ATMES7//UGT87A2 GO:0048509 regulation of meristem development BP 0.127850080902469 BAM3//AT3G01810//ATMAP70-1//AT1G51570 GO:0065008 regulation of biological quality BP 0.127914406014452 ACA4//OVA9//PLP3b//ILL3//ATGLR1.2//ABS//ZIFL1//ATGRP-6//AT5G01990//ATCS-C//BAM3//AT2G36480//ATPIN7//ATIPT2 GO:2000241 regulation of reproductive process BP 0.128131228066158 OVA9//AGL68//ABS//AT1G20410//ATROPGEF12//UGT87A2 GO:0034645 cellular macromolecule biosynthetic proc... BP 0.128753646707701 GATA26//OVA9//PSRP5//ATIPK2BETA//AT5G58330//LRL3//AT5G24510//ABS//AT5G22470//anac084//ATXR5//PMDH2//LUL1//IQD13//AT3G54290//BEH1//AtMYB45//AT4G32760//anac071//AT4G11160//AT1G18070//POLGAMMA2//AT3G12130//ETC1//AT3G18500//ATFKBP62//AtMYB110//AT3G21680//ANP3//AT1G04800//AT1G14220//AT2G25300//AT1G04480//AT2G36480//ATXPD//AT1G11950//ATNFXL1//ATATP-PRT2//AT2G13840//AT2G23390 GO:0009311 oligosaccharide metabolic process BP 0.13050829499993 AT5G58330//AT3G18500//ATATP-PRT2//AT2G23390 GO:0000041 transition metal ion transport BP 0.13318946604506 COPT3//AT3G50300//AT1G07560//AtGulLO5 GO:0044699 single-organism process BP 0.134158888605737 ERS//GPDHC1//ACA4//GCP1//OVA9//RXF26//PSRP5//AT1G16560//AtFAR6//AT1G57770//ATLOG9//PLP3b//AGL68//ATIPK2BETA//CYP89A3//ATTMPK.1//COPT3//AT5G58330//LRL3//NAP1;3//AT5G51830//ATGLR1.2//SSP4//LAZ5//AT5G42140//ABS//AT5G22840//AT5G22470//anac084//ZIFL1//ATXR5//PMDH2//ATGRP-6//AT5G06580//ATTOC34//AT5G01990//IQD13//ATCS-C//AtSDIR1//AT3G54290//MIDD1//AT3G50300//ALDH10A9//AT4G32760//SOBER1//BAM3//ATSK21//AT4G18593//anac071//AT4G11160//AT1G17860//AT1G19230//AT1G18070//AT1G18180//GAUT9//CYP705A33//ETC1//AT3G18500//ATFKBP62//AT3G28450//UGT71B6//ANP3//ACR6//AT3G01810//JGL//ATCAT3//AT1G20490//AT1G20410//AT1G55210//AT1G77550//ATMAP70-1//CLE12//AT1G73740//ATROPGEF12//AT1G51570//ATMAPK6//ACH2//AtGH9C1//AT1G07560//ATCK1//AT1G01980//AT1G52680//AtRLP3//AT1G16210//AT1G54320//AT2G25300//AT2G36480//AT2G22530//ATXPD//ATNFXL1//ATATP-PRT2//ATPIN7//AT2G20920//CVL1//SDR2//ATIPT2//CYP78A6//AtGulLO5//ATMES7//AT2G23390//UGT87A2//AT2G19080 GO:0016311 dephosphorylation BP 0.135893285471124 SSP4//PMDH2//AT4G18593//CVL1 GO:0048569 post-embryonic organ development BP 0.138186238974093 OVA9//RXF26//AGL68//ABS//BAM3//JGL//AT1G20410//ATMAPK6//ACH2 GO:0006875 cellular metal ion homeostasis BP 0.138584724840738 ACA4//ATGLR1.2 GO:0048653 anther development BP 0.138584724840738 BAM3//JGL GO:0009932 cell tip growth BP 0.139221858238504 ATGRP-6//BAM3//ATROPGEF12//AT1G52680//ATPIN7 GO:0070085 glycosylation BP 0.141367619167395 AT5G22470//AT4G32760//AT1G73740//AT2G25300 GO:0006825 copper ion transport BP 0.142005688977319 759_ GO:0009403 toxin biosynthetic process BP 0.142005688977319 571_ GO:0009700 indole phytoalexin biosynthetic process BP 0.142005688977319 571_ GO:0010375 stomatal complex patterning BP 0.142005688977319 571_ GO:0010540 basipetal auxin transport BP 0.142005688977319 252_ GO:0016093 polyprenol metabolic process BP 0.142005688977319 971_