GOID TERM ONTOLOGY pValue Genes GO:0009260 ribonucleotide biosynthetic process BP 0.00051033134011217 ACA11//ATPURM//ACA10//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0046390 ribose phosphate biosynthetic process BP 0.000538744506227673 ACA11//ATPURM//ACA10//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0009259 ribonucleotide metabolic process BP 0.00149883732457622 ACA11//ATPURM//ACA10//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0009220 pyrimidine ribonucleotide biosynthetic p... BP 0.00160680354217518 ATPURM//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0009218 pyrimidine ribonucleotide metabolic proc... BP 0.00170788952189827 ATPURM//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0006220 pyrimidine nucleotide metabolic process BP 0.00204029921244393 ATPURM//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0006221 pyrimidine nucleotide biosynthetic proce... BP 0.00204029921244393 ATPURM//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0072528 pyrimidine-containing compound biosynthe... BP 0.00255698195602826 ATPURM//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0072527 pyrimidine-containing compound metabolic... BP 0.00369018810169921 ATPURM//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0043687 post-translational protein modification BP 0.00416709407898106 ESD6//CRR2//POLD3//ATRPA1A GO:0006312 mitotic recombination BP 0.00472737660000374 AT5G17930//AT4G31880//ATRPA1A GO:0008152 metabolic process BP 0.00474841129905755 AT2G45290//ESD6//AtMAPR4//ATCSLD6//STT3A//AT5G20290//AT1G58150//AT5G66060//EIP9//CYP94B1//ATBAG7//APRR1//AT5G59260//AtcPT6//AT5G53150//ATGLR1.2//RPS19//AHK2//NCBP//AT5G17930//AT3G61340//AT3G58730//AT3G57470//ACA11//ATPURM//AT3G54080//FER//PAD1//AT3G50650//AT3G46720//CRR2//AT3G46170//ATLOX2//APX6//AT4G31880//ACA10//EBS//ATGA2OX8//ATWL4//AT4G18300//AT4G11300//AT4G10300//ARP5//TOC75-I//AT1G66660//AT1G75230//TOM40//AT3G23770//GPK1//ATSPPL4//CYP71B25//ATFKBP62//AT3G28450//AtEIN3//ATRGS1//AT3G15460//AT3G02840//AT3G09830//AT3G09630//ECT1//AT3G01380//LSM1A//AT1G15890//AT1G74360//PAF2//AT1G07990//AT1G17540//AT1G26460//ATLOX3//AT1G07520//RPF3//AT1G48430//AT1G64500//POLD3//AT1G54050//PRIN2//AT2G38830//AT2G11890//ACR5//AAE2//HCAR//XBCP3//ATFH8//ATRPA1A//AT2G35733//AtHBP2//ALB3//AT2G27720//PMDH1//ARAD1//PGP1 GO:0009756 carbohydrate mediated signaling BP 0.00613979607113256 ESD6//AtEIN3//ATRGS1//ATRPA1A GO:0010182 sugar mediated signaling pathway BP 0.00613979607113256 ESD6//AtEIN3//ATRGS1//ATRPA1A GO:0009165 nucleotide biosynthetic process BP 0.00780062153229687 ACA11//ATPURM//ACA10//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:1901293 nucleoside phosphate biosynthetic proces... BP 0.00804126101925156 ACA11//ATPURM//ACA10//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0071322 cellular response to carbohydrate stimul... BP 0.00922471312325011 ESD6//AtEIN3//ATRGS1//ATRPA1A GO:0031329 regulation of cellular catabolic process BP 0.0113029902608506 AHK2//PMDH1 GO:0034605 cellular response to heat BP 0.0113029902608506 ATBAG7//ATFKBP62 GO:0070417 cellular response to cold BP 0.0113029902608506 ATBAG7//AHK2 GO:1901137 carbohydrate derivative biosynthetic pro... BP 0.0119909159523353 ATGLR1.2//ACA11//ATPURM//ACA10//TOM40//AtEIN3//AT3G15460//AT3G09630//AT3G01380//AT1G07990//AT1G26460//ATRPA1A GO:0009560 embryo sac egg cell differentiation BP 0.0124547892255494 AT5G17930//AT4G31880//ARP5//ATRPA1A GO:0007292 female gamete generation BP 0.0139257109930274 AT5G17930//AT4G31880//ARP5//ATRPA1A GO:0009692 ethylene metabolic process BP 0.0147007933231615 AT4G11300//AT3G02840//AT3G09830//ATLOX3 GO:0009693 ethylene biosynthetic process BP 0.0147007933231615 AT4G11300//AT3G02840//AT3G09830//ATLOX3 GO:0043449 cellular alkene metabolic process BP 0.0147007933231615 AT4G11300//AT3G02840//AT3G09830//ATLOX3 GO:0043450 alkene biosynthetic process BP 0.0147007933231615 AT4G11300//AT3G02840//AT3G09830//ATLOX3 GO:1900673 olefin metabolic process BP 0.0147007933231615 AT4G11300//AT3G02840//AT3G09830//ATLOX3 GO:1900674 olefin biosynthetic process BP 0.0147007933231615 AT4G11300//AT3G02840//AT3G09830//ATLOX3 GO:0006071 glycerol metabolic process BP 0.0157181653000523 AT1G58150//AT1G48430 GO:0016444 somatic cell DNA recombination BP 0.0157181653000523 POLD3//ATRPA1A GO:0010193 response to ozone BP 0.0181591134677038 FER//AT3G02840 GO:0019400 alditol metabolic process BP 0.0181591134677038 AT1G58150//AT1G48430 GO:0006310 DNA recombination BP 0.0186088582903248 AT5G17930//AT3G61340//AT4G31880//POLD3//ATRPA1A GO:0090407 organophosphate biosynthetic process BP 0.0189425619397699 ACA11//ATPURM//ATLOX2//ACA10//AT4G10300//TOM40//AT3G15460//AT3G09630//AT3G01380//AT1G26460//ATRPA1A//PGP1 GO:0006816 calcium ion transport BP 0.0189836636728329 AT3G58730//ACA11//ATLOX2//ACA10 GO:0007015 actin filament organization BP 0.0189836636728329 AT5G58160//ADF1//AT1G64500//ATFH8 GO:0009127 purine nucleoside monophosphate biosynth... BP 0.0204990408318265 ACA11//ATPURM//ACA10 GO:0009168 purine ribonucleoside monophosphate bios... BP 0.0204990408318265 ACA11//ATPURM//ACA10 GO:0019216 regulation of lipid metabolic process BP 0.0207488344527227 ATLOX2//PMDH1 GO:0022412 cellular process involved in reproductio... BP 0.020891617199712 AT5G17930//AT4G31880//ARP5//ATRPA1A GO:0009561 megagametogenesis BP 0.0239676396665759 AT5G17930//AT4G31880//ARP5//ATRPA1A GO:0030029 actin filament-based process BP 0.0240394357717957 AT5G58160//ADF1//ARP5//AT1G64500//ATFH8 GO:0019693 ribose phosphate metabolic process BP 0.0246555269414084 ACA11//ATPURM//ACA10//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0009845 seed germination BP 0.0257602524275979 ESD6//AHK2//EBS//ATFKBP62//ATRPA1A GO:0009152 purine ribonucleotide biosynthetic proce... BP 0.026511368782345 ACA11//ATPURM//ACA10 GO:0009156 ribonucleoside monophosphate biosyntheti... BP 0.026511368782345 ACA11//ATPURM//ACA10 GO:0043170 macromolecule metabolic process BP 0.0267273620747317 ESD6//AtMAPR4//ATCSLD6//STT3A//AT5G20290//AT5G66060//EIP9//ATBAG7//APRR1//AT5G59260//AT5G53150//RPS19//AHK2//NCBP//AT5G17930//AT3G61340//AT3G57470//AT3G54080//FER//PAD1//AT3G50650//CRR2//ATLOX2//AT4G31880//EBS//ATWL4//AT4G18300//AT4G10300//ARP5//AT1G66660//AT1G75230//TOM40//GPK1//ATSPPL4//ATFKBP62//AT3G28450//AtEIN3//AT3G15460//AT3G09830//AT3G09630//ECT1//AT3G01380//LSM1A//AT1G15890//AT1G74360//PAF2//AT1G07990//AT1G17540//RPF3//AT1G64500//POLD3//AT1G54050//PRIN2//AT2G38830//XBCP3//ATFH8//ATRPA1A//AtHBP2//ALB3//AT2G27720//ARAD1 GO:0006839 mitochondrial transport BP 0.0273047556548264 AAC3//TOM40//AT1G78180//AT1G72820 GO:0090351 seedling development BP 0.0275582844592977 ESD6//AHK2//EBS//ATFKBP62//ATRPA1A GO:0007276 gamete generation BP 0.0296764654378951 AT5G17930//AT4G31880//ARP5//ATRPA1A GO:0030036 actin cytoskeleton organization BP 0.0296764654378951 AT5G58160//ADF1//AT1G64500//ATFH8 GO:0009124 nucleoside monophosphate biosynthetic pr... BP 0.0298338240104763 ACA11//ATPURM//ACA10 GO:0048609 multicellular organismal reproductive pr... BP 0.0317323758305358 ESD6//AT5G17930//AT4G31880//ARP5//ATLOX3//ATRPA1A GO:0009894 regulation of catabolic process BP 0.0324980233039361 AHK2//PMDH1 GO:0072503 cellular divalent inorganic cation homeo... BP 0.0324980233039361 ATGLR1.2//ACA10 GO:0048229 gametophyte development BP 0.0332748213280219 AT5G17930//AT4G31880//ARP5//AT3G23770//ATLOX3//POLD3//ATRPA1A GO:1901135 carbohydrate derivative metabolic proces... BP 0.0340333675251195 AT1G58150//ATGLR1.2//ACA11//ATPURM//ATLOX2//ACA10//AT4G10300//TOM40//AtEIN3//AT3G15460//AT3G09630//AT3G01380//AT1G07990//AT1G26460//ATRPA1A GO:0044238 primary metabolic process BP 0.0344741611821517 ESD6//AtMAPR4//ATCSLD6//STT3A//AT5G20290//AT1G58150//AT5G66060//EIP9//ATBAG7//APRR1//AT5G59260//AtcPT6//AT5G53150//ATGLR1.2//RPS19//AHK2//NCBP//AT5G17930//AT3G61340//AT3G58730//AT3G57470//ACA11//ATPURM//AT3G54080//FER//PAD1//AT3G50650//CRR2//ATLOX2//AT4G31880//ACA10//EBS//ATGA2OX8//ATWL4//AT4G18300//AT4G10300//ARP5//AT1G66660//AT1G75230//TOM40//AT3G23770//GPK1//ATSPPL4//ATFKBP62//AT3G28450//AtEIN3//AT3G15460//AT3G09830//AT3G09630//ECT1//AT3G01380//LSM1A//AT1G15890//AT1G74360//PAF2//AT1G07990//AT1G17540//AT1G26460//ATLOX3//RPF3//AT1G48430//AT1G64500//POLD3//AT1G54050//AT2G38830//XBCP3//ATFH8//ATRPA1A//AT2G35733//AtHBP2//ALB3//AT2G27720//PMDH1//ARAD1//PGP1 GO:0071704 organic substance metabolic process BP 0.0348430583692177 ESD6//AtMAPR4//ATCSLD6//STT3A//AT5G20290//AT1G58150//AT5G66060//EIP9//CYP94B1//ATBAG7//APRR1//AT5G59260//AtcPT6//AT5G53150//ATGLR1.2//RPS19//AHK2//NCBP//AT5G17930//AT3G61340//AT3G58730//AT3G57470//ACA11//ATPURM//AT3G54080//FER//PAD1//AT3G50650//CRR2//ATLOX2//AT4G31880//ACA10//EBS//ATGA2OX8//ATWL4//AT4G18300//AT4G11300//AT4G10300//ARP5//AT1G66660//AT1G75230//TOM40//AT3G23770//GPK1//ATSPPL4//ATFKBP62//AT3G28450//AtEIN3//AT3G15460//AT3G02840//AT3G09830//AT3G09630//ECT1//AT3G01380//LSM1A//AT1G15890//AT1G74360//PAF2//AT1G07990//AT1G17540//AT1G26460//ATLOX3//RPF3//AT1G48430//AT1G64500//POLD3//AT1G54050//PRIN2//AT2G38830//HCAR//XBCP3//ATFH8//ATRPA1A//AT2G35733//AtHBP2//ALB3//AT2G27720//PMDH1//ARAD1//PGP1 GO:0033554 cellular response to stress BP 0.0349374378883532 AtMAPR4//STT3A//ATBAG7//ATGLR1.2//AHK2//ACA11//AAC3//ARP5//AT1G75230//ATFKBP62//AT3G28450//AT3G02840//AT3G09830//AT1G74360//POLD3//ATRPA1A GO:0006281 DNA repair BP 0.0366290679758916 AtMAPR4//ARP5//AT1G75230//POLD3//ATRPA1A GO:0018208 peptidyl-proline modification BP 0.0391416922464689 AT5G66060//ATFKBP62 GO:0019538 protein metabolic process BP 0.0396072540657479 ESD6//AT5G20290//AT5G66060//EIP9//ATBAG7//AT5G59260//AT5G53150//RPS19//AHK2//NCBP//AT3G57470//FER//PAD1//CRR2//ATWL4//AT4G18300//AT1G66660//GPK1//ATSPPL4//ATFKBP62//AT3G28450//AtEIN3//AT3G09830//AT3G09630//AT3G01380//AT1G15890//AT1G74360//PAF2//AT1G07990//AT1G17540//AT1G64500//POLD3//AT1G54050//AT2G38830//XBCP3//ATRPA1A//AtHBP2//ALB3//AT2G27720 GO:0032504 multicellular organism reproduction BP 0.0409314996247678 ESD6//AT5G17930//AT4G31880//ARP5//ATLOX3//ATRPA1A GO:0072507 divalent inorganic cation homeostasis BP 0.0426402628366711 ATGLR1.2//ACA10 GO:0044267 cellular protein metabolic process BP 0.0444102757686485 ESD6//AT5G20290//AT5G66060//EIP9//ATBAG7//AT5G59260//AT5G53150//RPS19//AHK2//NCBP//FER//PAD1//CRR2//ATWL4//AT4G18300//AT1G66660//GPK1//ATFKBP62//AT3G28450//AtEIN3//AT3G09830//AT3G09630//AT3G01380//AT1G15890//AT1G74360//PAF2//AT1G07990//AT1G17540//AT1G64500//POLD3//AT1G54050//AT2G38830//ATRPA1A//AtHBP2//ALB3//AT2G27720 GO:0006796 phosphate-containing compound metabolic ... BP 0.0458404985813135 AT1G58150//AT5G59260//AHK2//ACA11//ATPURM//FER//ATLOX2//ACA10//ATWL4//AT4G10300//TOM40//GPK1//AT3G28450//AT3G15460//AT3G09830//AT3G09630//AT3G01380//AT1G74360//AT1G17540//AT1G26460//AT2G11890//ATRPA1A//ALB3//PGP1 GO:1901264 carbohydrate derivative transport BP 0.0462510139068299 GONST4//GTR2 GO:0044699 single-organism process BP 0.0483886645443197 ESD6//AtMAPR4//ATCSLD6//CLT1//GONST4//AT1G58150//AT5G66060//EIP9//AT5G63640//CYP94B1//GTR2//APRR1//AtcPT6//AT5G58160//ATGLR1.2//AHK2//AT5G17930//AT5G03380//AT3G61340//AT3G58730//ACA11//ATPURM//AT3G54080//MIDD1//FER//PAD1//CRR2//ADF1//ATLOX2//MEE38//APX6//AT4G31880//ACA10//AAC3//ARC1//EBS//ATGA2OX8//ATWL4//AT4G10300//ARP5//AT1G66660//AT1G75230//TOM40//AT3G23770//GPK1//CYP71B25//ATFKBP62//AT3G28450//AtEIN3//ATRGS1//AT3G15460//AT3G15470//AT3G02840//AT3G09830//AT3G09630//ECT1//AT3G01380//LSM1A//AT1G78180//AT1G74360//AT1G53380//AT1G07990//AT1G26460//ATLOX3//AT1G07520//AT1G48430//AT1G64500//AT1G72820//POLD3//ATCCX4//AT1G09920//ATFH8//ATRPA1A//AT2G25520//AT2G35733//AtHBP2//ALB3//PMDH1//ARAD1//PGP1//AT2G14835//AT2G30060 GO:0009126 purine nucleoside monophosphate metaboli... BP 0.0495504106663878 ACA11//ATPURM//ACA10 GO:0009167 purine ribonucleoside monophosphate meta... BP 0.0495504106663878 ACA11//ATPURM//ACA10 GO:0006259 DNA metabolic process BP 0.050088092414248 ESD6//AtMAPR4//AT5G17930//AT3G61340//AT4G31880//ARP5//AT1G75230//POLD3//ATRPA1A GO:0009909 regulation of flower development BP 0.0512956162500899 ESD6//EIP9//AHK2//EBS//ATRPA1A GO:0043412 macromolecule modification BP 0.052727709880051 ESD6//AT5G20290//AT5G66060//AT5G59260//AHK2//FER//CRR2//ATWL4//AT1G66660//TOM40//GPK1//ATFKBP62//AT3G28450//AtEIN3//AT3G15460//AT3G09830//AT3G09630//AT3G01380//AT1G15890//AT1G74360//AT1G07990//AT1G17540//AT1G64500//POLD3//AT2G38830//ATRPA1A//AtHBP2//ALB3 GO:0019953 sexual reproduction BP 0.0529562610875905 AT5G17930//AT4G31880//ARP5//ATRPA1A GO:0044260 cellular macromolecule metabolic process BP 0.0537934601704177 ESD6//AtMAPR4//ATCSLD6//STT3A//AT5G20290//AT5G66060//EIP9//ATBAG7//APRR1//AT5G59260//AT5G53150//RPS19//AHK2//NCBP//AT5G17930//AT3G61340//AT3G54080//FER//PAD1//AT3G50650//CRR2//ATLOX2//AT4G31880//EBS//ATWL4//AT4G18300//AT4G10300//ARP5//AT1G66660//AT1G75230//TOM40//GPK1//ATFKBP62//AT3G28450//AtEIN3//AT3G15460//AT3G09830//AT3G09630//ECT1//AT3G01380//LSM1A//AT1G15890//AT1G74360//PAF2//AT1G07990//AT1G17540//RPF3//AT1G64500//POLD3//AT1G54050//AT2G38830//ATFH8//ATRPA1A//AtHBP2//ALB3//AT2G27720 GO:0044237 cellular metabolic process BP 0.056802403726705 ESD6//AtMAPR4//ATCSLD6//STT3A//AT5G20290//AT1G58150//AT5G66060//EIP9//CYP94B1//ATBAG7//APRR1//AT5G59260//AtcPT6//AT5G53150//ATGLR1.2//RPS19//AHK2//NCBP//AT5G17930//AT3G61340//ACA11//ATPURM//AT3G54080//FER//PAD1//AT3G50650//CRR2//ATLOX2//AT4G31880//ACA10//EBS//ATGA2OX8//ATWL4//AT4G18300//AT4G11300//AT4G10300//ARP5//TOC75-I//AT1G66660//AT1G75230//TOM40//GPK1//ATFKBP62//AT3G28450//AtEIN3//AT3G15460//AT3G02840//AT3G09830//AT3G09630//ECT1//AT3G01380//LSM1A//AT1G15890//AT1G74360//PAF2//AT1G07990//AT1G17540//AT1G26460//ATLOX3//RPF3//AT1G48430//AT1G64500//POLD3//AT1G54050//AT2G38830//AT2G11890//HCAR//ATFH8//ATRPA1A//AT2G35733//AtHBP2//ALB3//AT2G27720//PMDH1//PGP1 GO:0000724 double-strand break repair via homologou... BP 0.0577157400280456 POLD3//ATRPA1A GO:0000725 recombinational repair BP 0.0577157400280456 POLD3//ATRPA1A GO:0019637 organophosphate metabolic process BP 0.0577666904328084 AT1G58150//ACA11//ATPURM//ATLOX2//ACA10//AT4G10300//TOM40//AT3G15460//AT3G09630//AT3G01380//AT1G26460//ATRPA1A//PGP1 GO:0043069 negative regulation of programmed cell d... BP 0.0581747697674168 ACA11//AT3G02840//AT3G09830//AT1G74360 GO:0009161 ribonucleoside monophosphate metabolic p... BP 0.0588366660127499 ACA11//ATPURM//ACA10 GO:1902589 single-organism organelle organization BP 0.0599656365251284 ESD6//AT5G58160//AT3G61340//MIDD1//ADF1//AT4G31880//ARC1//AT1G64500//ATFH8//ATRPA1A//ALB3//AT2G14835 GO:0006974 cellular response to DNA damage stimulus BP 0.0612360456686639 AtMAPR4//ARP5//AT1G75230//POLD3//ATRPA1A GO:0006164 purine nucleotide biosynthetic process BP 0.0612778174226025 ACA11//ATPURM//ACA10 GO:0006857 oligopeptide transport BP 0.0612778174226025 CLT1//GTR2//AT1G53380 GO:0015833 peptide transport BP 0.0612778174226025 CLT1//GTR2//AT1G53380 GO:0009553 embryo sac development BP 0.0618016764224256 AT5G17930//AT4G31880//ARP5//ATRPA1A GO:0060548 negative regulation of cell death BP 0.0618016764224256 ACA11//AT3G02840//AT3G09830//AT1G74360 GO:0009123 nucleoside monophosphate metabolic proce... BP 0.0637657832884757 ACA11//ATPURM//ACA10 GO:0009117 nucleotide metabolic process BP 0.0643146244175756 ACA11//ATPURM//ATLOX2//ACA10//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0006793 phosphorus metabolic process BP 0.0651408924521753 AT1G58150//AT5G59260//AHK2//ACA11//ATPURM//FER//ATLOX2//ACA10//ATWL4//AT4G10300//TOM40//GPK1//AT3G28450//AT3G15460//AT3G09830//AT3G09630//AT3G01380//AT1G74360//AT1G17540//AT1G26460//AT2G11890//ATRPA1A//ALB3//PGP1 GO:0048831 regulation of shoot system development BP 0.0658093446565144 ESD6//EIP9//AHK2//EBS//ATRPA1A GO:0006414 translational elongation BP 0.0658469971924824 AT5G20290//AT2G27720 GO:0006753 nucleoside phosphate metabolic process BP 0.0662572602003142 ACA11//ATPURM//ATLOX2//ACA10//TOM40//AT3G15460//AT3G09630//AT1G26460//ATRPA1A GO:0042886 amide transport BP 0.066300024252651 CLT1//GTR2//AT1G53380 GO:0048285 organelle fission BP 0.0673753770482642 AT3G61340//AT4G31880//ARC1//ATRPA1A//AT2G14835 GO:0071822 protein complex subunit organization BP 0.0688712844602054 AT5G58160//MIDD1//PAD1//ADF1//ARC1//TOC75-I//GPK1//AT1G64500//ATFH8//ALB3 GO:0050801 ion homeostasis BP 0.0694064394353349 ATGLR1.2//ACA11//ATLOX2//ACA10