GOID TERM ONTOLOGY pValue Genes GO:0031349 positive regulation of defense response BP 0.00263341863286529 ATERDJ3B//ERD2B//EVR//AtSDF2 GO:0010223 secondary shoot formation BP 0.00277171763463822 ATMBD9//ASHH2//CYP711A1 GO:0010346 shoot axis formation BP 0.00277171763463822 ATMBD9//ASHH2//CYP711A1 GO:0001763 morphogenesis of a branching structure BP 0.00362207254464367 ATMBD9//ASHH2//CYP711A1 GO:0042744 hydrogen peroxide catabolic process BP 0.00832737278766327 AT5G39940//ATMDAR2//mtLPD1//AT2G13440 GO:0042542 response to hydrogen peroxide BP 0.0116517353154245 ATHS83//ATFTSH6//ATERDJ3B//AT3G46920//ATUTR3//AtSDF2//ATUTR1 GO:0045089 positive regulation of innate immune res... BP 0.0138701367856663 ATERDJ3B//ERD2B//AtSDF2 GO:0009644 response to high light intensity BP 0.0153227348324153 ATHS83//ATFTSH6//ATERDJ3B//AT3G46920//ATUTR3//AtSDF2//ATUTR1 GO:0002684 positive regulation of immune system pro... BP 0.0182958921068332 ATERDJ3B//ERD2B//AtSDF2 GO:0050778 positive regulation of immune response BP 0.0182958921068332 ATERDJ3B//ERD2B//AtSDF2 GO:0048584 positive regulation of response to stimu... BP 0.0206857134095569 ATERDJ3B//ERD2B//EVR//AtSDF2 GO:0043543 protein acylation BP 0.0207900641558977 AT5G27470//AT5G66290//AT4G35240//AT4G19985//MAC3B//ATMBD9//AT3G02290//AT1G52320//AT1G63350//GLP5//AT1G05350//AT2G25740 GO:0009408 response to heat BP 0.0260383081051114 AT4G17250//ATHS83//ATFTSH6//ATERDJ3B//ATUTR3//AtSDF2//ARA-4//ATUTR1 GO:0006672 ceramide metabolic process BP 0.0285881140657091 AT5G42660//AT4G38500 GO:0006498 N-terminal protein lipidation BP 0.0295739269208757 AT5G27470//AT5G66290//AT4G35240//AT4G19985//MAC3B//AT3G02290//AT1G52320//AT1G63350//GLP5//AT1G05350//AT2G25740 GO:0006499 N-terminal protein myristoylation BP 0.0295739269208757 AT5G27470//AT5G66290//AT4G35240//AT4G19985//MAC3B//AT3G02290//AT1G52320//AT1G63350//GLP5//AT1G05350//AT2G25740 GO:0018377 protein myristoylation BP 0.0295739269208757 AT5G27470//AT5G66290//AT4G35240//AT4G19985//MAC3B//AT3G02290//AT1G52320//AT1G63350//GLP5//AT1G05350//AT2G25740 GO:0031365 N-terminal protein amino acid modificati... BP 0.0323049580235185 AT5G27470//AT5G66290//AT4G35240//AT4G19985//MAC3B//AT3G02290//AT1G52320//AT1G63350//GLP5//AT1G05350//AT2G25740 GO:0048518 positive regulation of biological proces... BP 0.0352171714775496 AREB3//CIA2//ATS4//AtEML3//AtYUC4//AT5G08460//ATERDJ3B//ATHB-8//AT4G05400//ERD2B//FMA//MEE35//ATRGS1//ATMBD9//AT1G52320//ATXRCC1//RHON1//EVR//AtSDF2//ASHH2//CPFTSY//CYP711A1 GO:0009553 embryo sac development BP 0.0367346965703596 AtRPP30//EDA7//ATUTR3//ASHH2//FIONA//AT2G02880//ATUTR1 GO:0006497 protein lipidation BP 0.037248174184892 AT5G27470//AT5G66290//AT4G35240//AT4G19985//MAC3B//AT3G02290//AT1G52320//AT1G63350//GLP5//AT1G05350//AT2G25740 GO:0042157 lipoprotein metabolic process BP 0.037248174184892 AT5G27470//AT5G66290//AT4G35240//AT4G19985//MAC3B//AT3G02290//AT1G52320//AT1G63350//GLP5//AT1G05350//AT2G25740 GO:0042158 lipoprotein biosynthetic process BP 0.037248174184892 AT5G27470//AT5G66290//AT4G35240//AT4G19985//MAC3B//AT3G02290//AT1G52320//AT1G63350//GLP5//AT1G05350//AT2G25740 GO:0006457 protein folding BP 0.0393247842677062 ATHS83//AT5G49580//AT5G49060//ATFTSH6//ATERDJ3B//ATUTR3//AtSDF2//ATUTR1 GO:0006629 lipid metabolic process BP 0.0514590941355681 AT5G67130//ATPLC//AT5G42660//CYP724A1//AT5G13470//AT5G08460//AT5G03600//LPAT2//AT3G53100//AtSSU//AT4G38500//ATPLC1//ATHDA14//ERD2B//AT3G06980//ORP3B//CYP86A4//AT1G80950//Z-ISO//CYP79B3//ASHH2//TPS10//CDS4//AtSLD2//CPFTSY//CYP711A1//KCS11 GO:0048522 positive regulation of cellular process BP 0.0518832653818551 AREB3//CIA2//ATS4//AtEML3//AT5G08460//ATHB-8//AT4G05400//FMA//MEE35//ATMBD9//AT1G52320//ATXRCC1//RHON1//EVR//ASHH2//CPFTSY GO:0015780 nucleotide-sugar transport BP 0.0538551158221586 GONST3//ATUTR1 GO:0051336 regulation of hydrolase activity BP 0.0538551158221586 ATRGS1//ATXRCC1 GO:0000302 response to reactive oxygen species BP 0.0547935631728643 ATHS83//BGLU42//ATFTSH6//ATERDJ3B//AT3G46920//ATUTR3//AtSDF2//ATUTR1 GO:0009642 response to light intensity BP 0.0573209203414098 ATHS83//ATFTSH6//ATERDJ3B//AT3G46920//ATUTR3//AtSDF2//ATUTR1 GO:0043086 negative regulation of catalytic activit... BP 0.0582561767894824 ATSBT1.3//AT5G45640//AT4G20430//ATCYCD2;1 GO:0006563 L-serine metabolic process BP 0.0685618122012068 AT5G04120//AT1G55880 GO:0009266 response to temperature stimulus BP 0.0714790634324422 AT4G17250//ATPLC//ATHS83//COR27//ATFTSH6//ATERDJ3B//JAL35//AT1G52310//ATUTR3//ATCCR1//AtSDF2//GLP5//ARA-4//MYBC1//AT2G40070//ATUTR1//KCS11 GO:0006399 tRNA metabolic process BP 0.0716632808271829 AT5G27470//AtRPP30//AT3G06980//AT2G13440//FIONA GO:0044092 negative regulation of molecular functio... BP 0.0719894646934778 ATSBT1.3//AT5G45640//AT4G20430//ATCYCD2;1 GO:0010604 positive regulation of macromolecule met... BP 0.0731859086498634 AREB3//CIA2//AT5G08460//AT4G05400//FMA//MEE35//AT1G52320//ATXRCC1//RHON1//ASHH2//CPFTSY GO:0032268 regulation of cellular protein metabolic... BP 0.0736988746619291 ATPLC//CYCP4;3//FMA//MEE35//ATCYCD2;1//PTB3//ASHH2//CPFTSY GO:0048440 carpel development BP 0.0784229316295899 MEE35//WIN1//ASHH2//TPS10//FIONA//AT2G40070 GO:0030048 actin filament-based movement BP 0.0831818294865884 ATPLC//ATPLC1//AT3G17060 GO:0031325 positive regulation of cellular metaboli... BP 0.0834328037887305 AREB3//CIA2//AT5G08460//AT4G05400//FMA//MEE35//AT1G52320//ATXRCC1//RHON1//ASHH2//CPFTSY GO:0051246 regulation of protein metabolic process BP 0.0867302745769278 ATPLC//CYCP4;3//FMA//MEE35//ATCYCD2;1//PTB3//ASHH2//CPFTSY GO:0048467 gynoecium development BP 0.0895377510538776 MEE35//WIN1//ASHH2//TPS10//FIONA//AT2G40070 GO:0006928 movement of cell or subcellular componen... BP 0.0912546852338754 ATPLC//ATPLC1//AT3G17060//AT1G09170 GO:0050790 regulation of catalytic activity BP 0.0914798330258494 ATSBT1.3//AT5G45640//CYCP4;3//AT4G20430//ATRGS1//ATXRCC1//ATCYCD2;1 GO:0045935 positive regulation of nucleobase-contai... BP 0.0979706689459154 AREB3//CIA2//AT5G08460//AT4G05400//FMA//MEE35//AT1G52320//ATXRCC1//RHON1//CPFTSY GO:0042793 transcription from plastid promoter BP 0.0992030458326127 ATTERC//RHON1//CPFTSY GO:0051094 positive regulation of developmental pro... BP 0.0992030458326127 AtYUC4//ATHB-8//FMA GO:0051173 positive regulation of nitrogen compound... BP 0.104366978063618 AREB3//CIA2//AT5G08460//AT4G05400//FMA//MEE35//AT1G52320//ATXRCC1//RHON1//CPFTSY GO:0051645 Golgi localization BP 0.109959214309048 ATPLC//ATPLC1 GO:0051646 mitochondrion localization BP 0.109959214309048 ATPLC//ATPLC1 GO:0060151 peroxisome localization BP 0.109959214309048 ATPLC//ATPLC1 GO:0006655 phosphatidylglycerol biosynthetic proces... BP 0.110518964698297 LPAT2//AT3G06980//AT1G80950 GO:0046471 phosphatidylglycerol metabolic process BP 0.110518964698297 LPAT2//AT3G06980//AT1G80950 GO:0048581 negative regulation of post-embryonic de... BP 0.116355132334606 ATS4//EVR//ASHH2 GO:0044419 interspecies interaction between organis... BP 0.11725108646093 ATERDJ3B//AT1G52310//WIN1//AtSDF2 GO:0019220 regulation of phosphate metabolic proces... BP 0.117491054370019 ATPLC//CYCP4;3//FMA//ATXRCC1//ATCYCD2;1//CPFTSY GO:0051174 regulation of phosphorus metabolic proce... BP 0.117491054370019 ATPLC//CYCP4;3//FMA//ATXRCC1//ATCYCD2;1//CPFTSY GO:0009657 plastid organization BP 0.119278166389266 MDA1//ATTERC//ATHDA14//MEE35//AT3G06980//RHON1//FIONA//CPFTSY GO:0031399 regulation of protein modification proce... BP 0.120840322754051 ATPLC//CYCP4;3//FMA//ATCYCD2;1//ASHH2//CPFTSY GO:0048573 photoperiodism, flowering BP 0.126562871050468 APRR1//AT5G51170//ATMBD9//AT1G55880 GO:0009809 lignin biosynthetic process BP 0.127969873551643 ATCCR1//AT2G02400 GO:0009416 response to light stimulus BP 0.12992033204427 APRR1//ATHS83//AT5G51170//AT5G47800//ATS4//ATFTSH6//ATERDJ3B//AT3G46920//AT4G05400//ATMBD9//AT1G52320//AT1G55880//mtLPD1//ATUTR3//ELP//AtSDF2//AT2G40070//ATUTR1//KCS11 GO:0009648 photoperiodism BP 0.13617549456306 APRR1//AT5G51170//ATMBD9//AT1G55880 GO:0051241 negative regulation of multicellular org... BP 0.140789520497523 ATS4//EVR//ASHH2 GO:0035303 regulation of dephosphorylation BP 0.141090157848003 ATPLC//FMA//ATXRCC1//CPFTSY GO:0009699 phenylpropanoid biosynthetic process BP 0.14607460912464 ATMDAR2//ATCCR1//AT2G02400//CYP711A1 GO:0009070 serine family amino acid biosynthetic pr... BP 0.14786669118197 AT5G04120//JAL35//AT1G55880//CYP79B3//ELP GO:0051640 organelle localization BP 0.151126977484142 ATPLC//ATTERC//ATPLC1//CPFTSY GO:0090627 plant epidermal cell differentiation BP 0.151239895708005 COBL9//JKD//AGP3//ATHB-8//FMA//ATMBD9//ELP//XEG113 GO:0065009 regulation of molecular function BP 0.151316883815543 ATSBT1.3//AT5G45640//CYCP4;3//AT4G20430//ATRGS1//ATXRCC1//ATCYCD2;1 GO:0009910 negative regulation of flower developmen... BP 0.156125599501372 EVR//ASHH2 GO:0009611 response to wounding BP 0.158130655698598 ATMDAR2//ATRGS1//JAL35//OPCL1//CYP79B3//TPS10//CYP711A1 GO:0008654 phospholipid biosynthetic process BP 0.160616111278742 AT5G13470//LPAT2//ATHDA14//AT3G06980//AT1G80950//CYP79B3//CDS4//CPFTSY GO:0045893 positive regulation of transcription, DN... BP 0.161419025688101 AREB3//CIA2//AT5G08460//AT4G05400//FMA//MEE35//AT1G52320//RHON1//CPFTSY GO:0051254 positive regulation of RNA metabolic pro... BP 0.161419025688101 AREB3//CIA2//AT5G08460//AT4G05400//FMA//MEE35//AT1G52320//RHON1//CPFTSY GO:1902680 positive regulation of RNA biosynthetic ... BP 0.161419025688101 AREB3//CIA2//AT5G08460//AT4G05400//FMA//MEE35//AT1G52320//RHON1//CPFTSY GO:1903508 positive regulation of nucleic acid-temp... BP 0.161419025688101 AREB3//CIA2//AT5G08460//AT4G05400//FMA//MEE35//AT1G52320//RHON1//CPFTSY GO:0035670 plant-type ovary development BP 0.161427857084385 MEE35//WIN1//ASHH2//FIONA GO:0048481 ovule development BP 0.161427857084385 MEE35//WIN1//ASHH2//FIONA GO:2000242 negative regulation of reproductive proc... BP 0.165756390030101 EVR//ASHH2 GO:0042127 regulation of cell proliferation BP 0.166763015310324 AtEML3//ATHB-8//ATRGS1 GO:0044249 cellular biosynthetic process BP 0.169978277896549 HDG4//AT5G04120//AREB3//AT5G27470//AL4//AT5G66290//APRR1//AtRPP30//ATPLC//CIA2//AT5G55450//AT5G53920//AT5G51360//AT5G46910//AT5G44320//AT5G39850//AT5G13470//AtEML3//ATTERC//AtYUC4//AT5G08460//AtENGase85A//ATMDAR2//JKD//AtMYB17//LPAT2//AT3G55160//HIRA//AtSSU//AT4G35240//ATHDA14//ATHB-8//AT4G31060//AtMYB97//GATA25//AT4G24060//AT4G21060//PyrD//AT4G19985//AT4G05400//MAC3B//AT1G55090//ERD2B//FMA//MEE35//AT3G21710//AT3G16200//EIF4A1//AT3G06980//ATMBD9//AT3G02290//JAL35//OPCL1//AT1G52320//AT1G52310//AT1G63350//WIN1//AT1G55880//RHON1//AtMYB117//ATCCR1//AT1G80950//APT2//AT1G02830//ARF12//Z-ISO//ATCYCD2;1//CYP79B3//ELP//PTB3//GLP5//AT1G05350//XEG113//ARR14//ATOFP7//TPS10//CDS4//AT2G02400//FIONA//AtSLD2//AT2G25740//CPFTSY//MYBC1//COX10//CYP711A1//AT2G45700//KCS11 GO:0006869 lipid transport BP 0.171977368508931 ATRMR1//AT5G55450//AT3G58550//ELP GO:0048469 cell maturation BP 0.172169579989502 COBL9//JKD//AGP3//ATHB-8//ATMBD9//ELP//XEG113 GO:0048764 trichoblast maturation BP 0.172169579989502 COBL9//JKD//AGP3//ATHB-8//ATMBD9//ELP//XEG113 GO:0048765 root hair cell differentiation BP 0.172169579989502 COBL9//JKD//AGP3//ATHB-8//ATMBD9//ELP//XEG113 GO:0009926 auxin polar transport BP 0.173464982340855 PIN5//ELP//CYP711A1 GO:0006417 regulation of translation BP 0.175487590580872 MEE35//PTB3 GO:0010016 shoot system morphogenesis BP 0.176455522111583 ATHB-8//AT4G19985//FMA//MEE35//AT3G06980//ATMBD9//AT1G52310//ASHH2//CYP711A1 GO:0000338 protein deneddylation BP 0.180241970902701 ATS4//AT4G05400//AT1G52320 GO:0010388 cullin deneddylation BP 0.180241970902701 ATS4//AT4G05400//AT1G52320 GO:0006720 isoprenoid metabolic process BP 0.182645084215304 AtSSU//ATHDA14//AT3G06980//Z-ISO//CYP79B3//ASHH2//TPS10//CPFTSY//CYP711A1 GO:0009698 phenylpropanoid metabolic process BP 0.183410625802026 ATMDAR2//OPCL1//ATCCR1//AT2G02400//CYP711A1 GO:0008033 tRNA processing BP 0.185306730127142 AtRPP30//AT2G13440 GO:0016226 iron-sulfur cluster assembly BP 0.187089826769952 MEE35//AT3G06980//RHON1 GO:0031163 metallo-sulfur cluster assembly BP 0.187089826769952 MEE35//AT3G06980//RHON1 GO:0035821 modification of morphology or physiology... BP 0.187089826769952 ATERDJ3B//AT1G52310//AtSDF2 GO:0044003 modification by symbiont of host morphol... BP 0.187089826769952 ATERDJ3B//AT1G52310//AtSDF2 GO:0051817 modification of morphology or physiology... BP 0.187089826769952 ATERDJ3B//AT1G52310//AtSDF2 GO:0060918 auxin transport BP 0.187089826769952 PIN5//ELP//CYP711A1