GOID TERM ONTOLOGY pValue Genes GO:0009612 response to mechanical stimulus BP 0.00714346443494945 AtCML8//ATXT1//AT3G04640//ATCPK30 GO:0006473 protein acetylation BP 0.00844104328511287 AtSGF29b//HAF2//AT3G04640 GO:0019915 lipid storage BP 0.0102149123472174 MGO1//ATU2AF35B//ADL2//CRB//AT2G25890 GO:0010207 photosystem II assembly BP 0.0116942311298599 PSBI//AT5G58330//PSAE-1//TOC75-I//AT1G64355//AT2G43560//AT1G14270//ATGLK1 GO:0006334 nucleosome assembly BP 0.0143833944174807 AT5G10980//AT3G53730//HTB11//HTA4//AT3G27360 GO:0034728 nucleosome organization BP 0.0143833944174807 AT5G10980//AT3G53730//HTB11//HTA4//AT3G27360 GO:0065004 protein-DNA complex assembly BP 0.0143833944174807 AT5G10980//AT3G53730//HTB11//HTA4//AT3G27360 GO:0071824 protein-DNA complex subunit organization BP 0.0143833944174807 AT5G10980//AT3G53730//HTB11//HTA4//AT3G27360 GO:0006354 DNA-templated transcription, elongation BP 0.0145893208544038 RPL32//ATCG00800//ATPE//PSBI//NRPC1//AT5G08565 GO:0009756 carbohydrate mediated signaling BP 0.0181689367424581 MGO1//ATU2AF35B//ADL2//ASML2//CRB GO:0010182 sugar mediated signaling pathway BP 0.0181689367424581 MGO1//ATU2AF35B//ADL2//ASML2//CRB GO:0071103 DNA conformation change BP 0.0200175145740534 MGO1//AT5G10980//AT3G53730//HTB11//HTA4//AT3G27360 GO:0031497 chromatin assembly BP 0.0225595049363583 AT5G10980//AT3G53730//HTB11//HTA4//AT3G27360 GO:0051235 maintenance of location BP 0.0241628874037176 MGO1//ATU2AF35B//ADL2//CRB//AT2G25890 GO:0071322 cellular response to carbohydrate stimul... BP 0.0241628874037176 MGO1//ATU2AF35B//ADL2//ASML2//CRB GO:0006323 DNA packaging BP 0.0275854898197722 AT5G10980//AT3G53730//HTB11//HTA4//AT3G27360 GO:0051093 negative regulation of developmental pro... BP 0.0329595056345216 ELF6//MGO1//OBE1//EPF2//ATGLK1//AtCLV3 GO:0008380 RNA splicing BP 0.0378072448679567 AT5G65760//AT5G50000//AT5G14500//AT5G08565//At-RS40//HAF2//EMB2769//AT3G03970 GO:0050826 response to freezing BP 0.0405164924546687 MGO1//ATU2AF35B//ADL2//CRB GO:0043933 macromolecular complex subunit organizat... BP 0.0419167823733327 PSBI//ELF6//AT5G13520//AT5G15610//AT5G58330//CSN6A//MGO1//AtSGF29b//AT5G10980//AT3G53730//HTB11//ARAC6//PFN2//PSAE-1//HTA4//TOC75-I//HAF2//AT3G27360//AT3G02650//AT3G02640//AT3G03970//AT1G64355//AT2G43560//AT1G14270//ATGSTU24//AT1G62850//ATGLK1 GO:0009640 photomorphogenesis BP 0.0437985142005562 CSN6A//MGO1//ATU2AF35B//BHLH136//ADL2//AT3G02650//CRB GO:0019684 photosynthesis, light reaction BP 0.045326246686523 ATPE//PSBI//AT5G58330//LIL3:2//PSAE-1//TOC75-I//AT1G64355//AT2G43560//AT1G14270//ATGLK1 GO:0000394 RNA splicing, via endonucleolytic cleava... BP 0.051790845851492 AT5G65760//AT5G50000//AT5G14500//AT5G08565//HAF2 GO:0015979 photosynthesis BP 0.0554976984461204 RPL32//ATCG00800//ATPE//PSBI//AT5G58330//LIL3:2//PSAE-1//TOC75-I//AT1G64355//AT2G43560//AT1G14270//ATGLK1 GO:0016192 vesicle-mediated transport BP 0.0567033438366028 ATEXO70C1//AT5G16880//ATSYP41//VPS60.2//ATGRIP//NOI//AT3G60260//AT3G58600//ATRAB7A//ARA-5//ATSYP112//VPS2.1//AT2G38410 GO:0009933 meristem structural organization BP 0.0615855812165315 MGO1//ATU2AF35B//ADL2//OBE1//AT2G43800//CRB//AtCLV3 GO:0009686 gibberellin biosynthetic process BP 0.064286191415909 AT5G51310//CYP96A11//CRB GO:0016102 diterpenoid biosynthetic process BP 0.064286191415909 AT5G51310//CYP96A11//CRB GO:0010876 lipid localization BP 0.0660600945630984 MGO1//ATU2AF35B//ADL2//AT4G12360//CRB//AT2G20970//AT2G25890 GO:0048532 anatomical structure arrangement BP 0.0683692067881358 MGO1//ATU2AF35B//ADL2//OBE1//AT2G43800//CRB//AtCLV3 GO:0010162 seed dormancy process BP 0.0689475731098781 MGO1//ATU2AF35B//ADL2//CRB//AT2G25890 GO:0022611 dormancy process BP 0.0689475731098781 MGO1//ATU2AF35B//ADL2//CRB//AT2G25890 GO:0019827 stem cell maintenance BP 0.0692600581130123 MGO1//OBE1//AtCLV3 GO:0006333 chromatin assembly or disassembly BP 0.0720786765475444 AT5G10980//AT3G53730//HTB11//HTA4//AT3G27360 GO:0006325 chromatin organization BP 0.0724394266734119 ELF6//AT5G13520//AT5G15610//MGO1//AtSGF29b//AT5G10980//AT3G53730//HTB11//HTA4//HAF2//AT3G27360//AT3G02650//AT3G02640 GO:0048863 stem cell differentiation BP 0.0744025642700536 MGO1//OBE1//AtCLV3 GO:0048864 stem cell development BP 0.0744025642700536 MGO1//OBE1//AtCLV3 GO:0016131 brassinosteroid metabolic process BP 0.0783805753397203 BEN1//ABS1//AT5G50000//AtGH9B7 GO:0006891 intra-Golgi vesicle-mediated transport BP 0.0797093428956294 AT5G16880//ATSYP41//AT2G38410 GO:0009625 response to insect BP 0.0797093428956294 MGO1//IMS3//AT1G19020 GO:0009685 gibberellin metabolic process BP 0.0797093428956294 AT5G51310//CYP96A11//CRB GO:0034622 cellular macromolecular complex assembly BP 0.0811957067715724 PSBI//AT5G58330//CSN6A//AT5G10980//AT3G53730//HTB11//PSAE-1//HTA4//TOC75-I//AT3G27360//AT3G03970//AT1G64355//AT2G43560//AT1G14270//ATGSTU24//ATGLK1 GO:0016128 phytosteroid metabolic process BP 0.0824724763160224 BEN1//ABS1//AT5G50000//AtGH9B7 GO:0006897 endocytosis BP 0.0854009365969522 AT3G60260//AT3G58600 GO:0016101 diterpenoid metabolic process BP 0.0907974577628731 AT5G51310//CYP96A11//CRB GO:0009250 glucan biosynthetic process BP 0.0931724662163949 ATCESA7//ATGRIP//AT5G58330//ATXT1//AT3G45050//APL3//UKL2//ATGSL06 GO:0071822 protein complex subunit organization BP 0.0968342787230624 PSBI//AT5G58330//CSN6A//AT5G10980//AT3G53730//HTB11//ARAC6//PFN2//PSAE-1//HTA4//TOC75-I//AT3G27360//AT1G64355//AT2G43560//AT1G14270//ATGSTU24//AT1G62850//ATGLK1 GO:2000026 regulation of multicellular organismal d... BP 0.0968803414956774 ELF6//C2H2//AT5G15610//MGO1//ATU2AF35B//BHLH136//AT5G09760//AP3//ADL2//AT3G02650//EPF2//AtGH9B7//ATGLK1//CRB//AtCLV3 GO:0048507 meristem development BP 0.0974565584164232 MGO1//ATU2AF35B//BHLH136//AT5G09760//AP3//ADL2//OBE1//AT2G43800//AtGH9B7//CRB//AtCLV3 GO:0009657 plastid organization BP 0.101617019889121 AT5G58330//HCF106//NDH18//LSU2//AT3G45050//ADL2//PSAE-1//AT1G44000//AT2G43560//ATGLK1 GO:0009888 tissue development BP 0.105150275644793 ATCESA7//MGO1//HCF106//AT5G51310//ATU2AF35B//ATS//BHLH136//AT5G09760//TRM28//ATXT1//AP3//ADL2//CYCP2;1//OBE1//ATGSTF14//AT2G43800//ADF11//EPF2//AtGH9B7//CKS1//CRB//AtCLV3//UCC1 GO:0006396 RNA processing BP 0.107229484625074 ATGRIP//AT5G65760//NRPC1//AT5G50000//AT5G41770//AT5G14460//AT5G14500//AT5G08565//At-RS40//HAF2//EMB2769//AT3G03970 GO:2000241 regulation of reproductive process BP 0.108089863500345 ELF6//AT5G15610//MGO1//ATU2AF35B//AP3//ADL2//AT3G02650//ATGLK1//CRB GO:0045596 negative regulation of cell differentiat... BP 0.108544229787024 MGO1//OBE1//AtCLV3 GO:0048581 negative regulation of post-embryonic de... BP 0.108544229787024 ELF6//EPF2//ATGLK1 GO:0009909 regulation of flower development BP 0.109085361455183 AT5G15610//MGO1//ATU2AF35B//AP3//ADL2//AT3G02650//ATGLK1//CRB GO:0051274 beta-glucan biosynthetic process BP 0.109135913306721 ATCESA7//ATGRIP//UKL2//ATGSL06 GO:0009409 response to cold BP 0.10969960818649 ATTIL//MGO1//ATU2AF35B//LTI30//AT3G48710//ADL2//AT4G33310//RCI2B//COR413-TM1//mMDH1//AT1G01250//AT1G65280//CRB//ATSYP112 GO:0009631 cold acclimation BP 0.112835533058297 LTI30//COR413-TM1 GO:0010092 specification of organ identity BP 0.112835533058297 AP3//FLO10 GO:0010093 specification of floral organ identity BP 0.112835533058297 AP3//FLO10 GO:0009086 methionine biosynthetic process BP 0.121060438766905 AT5G65760//AT5G50000//AT5G14500 GO:0009886 post-embryonic morphogenesis BP 0.122011992974142 IAA28//MGO1//HCF106//AP3//AT4G26660//ATSBT3.12//AT3G32180//AT3G13190//FLO10//EPF2//AT2G20970 GO:0000079 regulation of cyclin-dependent protein s... BP 0.122427041893291 CYCP2;1//CKS1 GO:0051239 regulation of multicellular organismal p... BP 0.12249699520534 ELF6//C2H2//AT5G15610//MGO1//ATU2AF35B//BHLH136//AT5G09760//AP3//ADL2//AT3G02650//EPF2//AtGH9B7//ATGLK1//CRB//AtCLV3 GO:0010431 seed maturation BP 0.127924257234598 MGO1//ATU2AF35B//ADL2//CRB//AT2G25890 GO:0048444 floral organ morphogenesis BP 0.13485300841904 AP3//AT4G26660//AT3G32180//AT3G13190//FLO10//AT2G20970 GO:0048563 post-embryonic organ morphogenesis BP 0.13485300841904 AP3//AT4G26660//AT3G32180//AT3G13190//FLO10//AT2G20970 GO:0009741 response to brassinosteroid BP 0.139136834755045 ABS1//ELF6//THE1//BHLH136 GO:0006555 methionine metabolic process BP 0.140759814985213 AT5G65760//AT5G50000//AT5G14500 GO:0006863 purine nucleobase transport BP 0.140759814985213 AT5G46310//AT1G19160//ATPUP4 GO:0015851 nucleobase transport BP 0.140759814985213 AT5G46310//AT1G19160//ATPUP4 GO:0051241 negative regulation of multicellular org... BP 0.140759814985213 ELF6//EPF2//ATGLK1 GO:0043543 protein acylation BP 0.141859856853453 CPK7//AT4G16360//AtSGF29b//AT5G37960//AT3G59130//AT4G34330//HAF2//AT2G04020//AT3G04640//APK1//ATCPK30 GO:0048580 regulation of post-embryonic development BP 0.141865646108371 ELF6//AT5G15610//MGO1//ATU2AF35B//AP3//ADL2//AT3G02650//EPF2//ATGLK1//CRB GO:0065003 macromolecular complex assembly BP 0.14481979652625 PSBI//AT5G58330//CSN6A//AT5G10980//AT3G53730//HTB11//PSAE-1//HTA4//TOC75-I//AT3G27360//AT3G03970//AT1G64355//AT2G43560//AT1G14270//ATGSTU24//ATGLK1 GO:0008202 steroid metabolic process BP 0.146471079279652 BEN1//ABS1//AT5G50000//ORP2A//AT3G28200//AtGH9B7 GO:0048193 Golgi vesicle transport BP 0.14842077475957 AT5G16880//ATSYP41//ATGRIP//NOI//ARA-5//VPS2.1//AT2G38410 GO:0051276 chromosome organization BP 0.151718172052935 ELF6//AT5G13520//AT5G15610//NRPC1//AT5G59740//MGO1//AtSGF29b//AT5G10980//AT3G53730//HTB11//HTA4//HAF2//AT3G27360//AT3G02650//AT3G02640 GO:0009742 brassinosteroid mediated signaling pathw... BP 0.152262959006139 ABS1//THE1 GO:0009765 photosynthesis, light harvesting BP 0.152262959006139 PSBI//LIL3:2 GO:0043401 steroid hormone mediated signaling pathw... BP 0.152262959006139 ABS1//THE1 GO:0048545 response to steroid hormone BP 0.152262959006139 ABS1//THE1 GO:0071367 cellular response to brassinosteroid sti... BP 0.152262959006139 ABS1//THE1 GO:0071383 cellular response to steroid hormone sti... BP 0.152262959006139 ABS1//THE1 GO:2000242 negative regulation of reproductive proc... BP 0.152262959006139 ELF6//ATGLK1 GO:0009639 response to red or far red light BP 0.155982834751802 CSN6A//MGO1//ATU2AF35B//BHLH136//ADL2//AT3G02650//AFR//HLH1//CRB GO:0050793 regulation of developmental process BP 0.156453969739251 ELF6//C2H2//AT5G15610//MGO1//THE1//ATU2AF35B//BHLH136//AT5G09760//AP3//ADL2//AT3G02650//OBE1//EPF2//AtGH9B7//ATGLK1//CRB//AtCLV3 GO:0016567 protein ubiquitination BP 0.158528176619153 NRPC1//MGO1//ATU2AF35B//AT5G37870//ADL2//CRB GO:0070647 protein modification by small protein co... BP 0.159083256044039 ATCESA7//NRPC1//CSN6A//MGO1//ATU2AF35B//AT5G37870//ADL2//AT3G02650//CRB GO:0009809 lignin biosynthetic process BP 0.162502100099016 ATLAC15//UKL2 GO:0009834 plant-type secondary cell wall biogenesi... BP 0.162502100099016 ATCESA7//ANAC070 GO:0010440 stomatal lineage progression BP 0.162502100099016 CYCP2;1//CKS1 GO:0009668 plastid membrane organization BP 0.163876510860256 HCF106//NDH18//AT3G45050//AT2G43560//ATGLK1 GO:0010027 thylakoid membrane organization BP 0.163876510860256 HCF106//NDH18//AT3G45050//AT2G43560//ATGLK1 GO:0048831 regulation of shoot system development BP 0.168419256318206 AT5G15610//MGO1//ATU2AF35B//AP3//ADL2//AT3G02650//ATGLK1//CRB GO:0007264 small GTPase mediated signal transductio... BP 0.168534387744334 ARAC6//ATRAB7A//ARA-5 GO:0010074 maintenance of meristem identity BP 0.172860390356261 OBE1//AtCLV3 GO:0048445 carpel morphogenesis BP 0.172860390356261 AT3G32180//AT2G20970 GO:0050790 regulation of catalytic activity BP 0.175249824289326 AT5G58330//AtI-2//ATSBT3.12//XSP1//CYCP2;1//CKS1