GOID TERM ONTOLOGY pValue Genes GO:0051093 negative regulation of developmental pro... BP 0.00228931017137038 VIP4//AtEMF2//HB-7//ATCUL4//CAK1AT//EVR//AGL3//BLH8//ASHH2//ATC GO:0009438 methylglyoxal metabolic process BP 0.00494839779572775 AT5G58370//AT5G03905//AT3G63510//ATNUDX26//ETHE1//AtLpxB//LIP2 GO:0019243 methylglyoxal catabolic process to D-lac... BP 0.00494839779572775 AT5G58370//AT5G03905//AT3G63510//ATNUDX26//ETHE1//AtLpxB//LIP2 GO:0042182 ketone catabolic process BP 0.00494839779572775 AT5G58370//AT5G03905//AT3G63510//ATNUDX26//ETHE1//AtLpxB//LIP2 GO:0051596 methylglyoxal catabolic process BP 0.00494839779572775 AT5G58370//AT5G03905//AT3G63510//ATNUDX26//ETHE1//AtLpxB//LIP2 GO:0009910 negative regulation of flower developmen... BP 0.00547525216361446 VIP4//AtEMF2//EVR//ASHH2//ATC GO:0046185 aldehyde catabolic process BP 0.00613545975729251 AT5G58370//AT5G03905//AT3G63510//ATNUDX26//ETHE1//AtLpxB//LIP2 GO:2000242 negative regulation of reproductive proc... BP 0.00639381292025888 VIP4//AtEMF2//EVR//ASHH2//ATC GO:0006089 lactate metabolic process BP 0.00680294999026337 AT5G58370//AT5G03905//AT3G63510//ATNUDX26//ETHE1//AtLpxB//LIP2 GO:0009741 response to brassinosteroid BP 0.00752289049540917 AXR5//IAA14//ANAC101//AT4G37295//AT3G11110//IAA19//GCR1 GO:0042180 cellular ketone metabolic process BP 0.00758844717163071 AT5G58370//AT5G53920//AT5G03905//AT3G63510//ATHST//ATNUDX26//ETHE1//AAE14//AtLpxB//LIP2 GO:0006730 one-carbon metabolic process BP 0.00925343909225546 ACCD//ATDFC//AT1G76120 GO:0048581 negative regulation of post-embryonic de... BP 0.0128266045946144 VIP4//AtEMF2//ATCUL4//EVR//ASHH2//ATC GO:0006301 postreplication repair BP 0.0186031949958885 AT3G11100//ATREV3//UBC6 GO:0051241 negative regulation of multicellular org... BP 0.0242114000222632 VIP4//AtEMF2//ATCUL4//EVR//ASHH2//ATC GO:1901136 carbohydrate derivative catabolic proces... BP 0.0310404070298931 AT3G56310//AT4G29630//AT3G24180//NSH2 GO:0045595 regulation of cell differentiation BP 0.0320151411571767 HB-7//ATCUL4//JKD//CAK1AT//ATROPGEF12//AGL3//BLH8 GO:0009891 positive regulation of biosynthetic proc... BP 0.0328517154141026 BZIP17//AAP2//ANAC101//AT5G08460//AME3//GATA9//ATIPT6//ATUBP6//4CL.1//PGDH//AT1G64370//AT1G67870//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29 GO:0010106 cellular response to iron ion starvation BP 0.0341443283930825 ATTIP2;3//ATCAX4//AT3G21710//ZIP10//AT1G08670//AT1G62660//AT2G21045 GO:0097164 ammonium ion metabolic process BP 0.0368835882133945 ATHDH//AtRPP30//PLDALPHA4 GO:0051301 cell division BP 0.0380465586334847 AT3//VIP4//BASL//AT5G58370//ATSBT1.3//ATCUL4//JKD//ATNACK2//nPAP//AT4G20430//ATLP-1//PLDALPHA4//SWEETIE//AGC2-3//AT2G07170 GO:0045596 negative regulation of cell differentiat... BP 0.0385461362882134 HB-7//CAK1AT//AGL3//BLH8 GO:0006595 polyamine metabolic process BP 0.0426543327429461 ATHDH//AtRPP30//4CL.1//AT1G62660 GO:0006826 iron ion transport BP 0.0435939307390452 ATTIP2;3//ATCAX4//AT3G21710//ZIP10//AT1G08670//AT1G62660//AT2G21045 GO:1901658 glycosyl compound catabolic process BP 0.0484804108841596 AT3G56310//AT4G29630//NSH2 GO:1901565 organonitrogen compound catabolic proces... BP 0.0509517697991262 ATLDA//BETA-UP//AT3G56310//AT4G29630//AT4G20930//4CL.1//AT3G24180//PAL4//PGDH//NSH2//AT1G12050//LIP2//AT1G62660 GO:0006813 potassium ion transport BP 0.0515811985812627 ATKCO2//AT5G41330//ATHAK5//ATKEA1 GO:0008033 tRNA processing BP 0.0515811985812627 AtRPP30//AT3G63510//AT4G01880//ATIPT6 GO:0006623 protein targeting to vacuole BP 0.0530954024447521 CID6//AT5G61530//AT4G34180//nPAP//ATSYP51//ATI1 GO:0072665 protein localization to vacuole BP 0.0530954024447521 CID6//AT5G61530//AT4G34180//nPAP//ATSYP51//ATI1 GO:0072666 establishment of protein localization to... BP 0.0530954024447521 CID6//AT5G61530//AT4G34180//nPAP//ATSYP51//ATI1 GO:0009893 positive regulation of metabolic process BP 0.0552745668890393 BZIP17//AAP2//ANAC101//AT5G08460//AME3//GATA9//ATIPT6//ATUBP6//4CL.1//PGDH//AT1G64370//AT1G67870//UMAMIT23//ATMYB2//RHON1//GCR1//ATSPL14//FZL//AT1G02110//ATREV3//ASHH2//ATHB-7//BGLU29 GO:0007568 aging BP 0.0570194612027713 AT5G25770//AT5G10420//ATMYB2//NSH2//RNS3//ATMST1//ATPSAT1//AT2G21045 GO:2000241 regulation of reproductive process BP 0.0578276804780663 FWA//AT3//ARI14//VIP4//AtEMF2//ATCUL4//GATA18//YUC//AT4G30130//ATROPGEF12//EMB2814//EVR//ASHH2//ATC//AT2G07170 GO:0044282 small molecule catabolic process BP 0.0585825036369613 AT5G58370//AT5G03905//AT3G63510//AT3G56310//AT4G20930//ATNUDX26//PAL4//PGDH//CAT9//ETHE1//AT1G17340//ATPAE1//PEX6//AtLpxB//AT1G12050//LIP2//ATPSAT1//AtCYS2//ATPEX10 GO:0006596 polyamine biosynthetic process BP 0.0625567305644135 ATHDH//AtRPP30 GO:0015766 disaccharide transport BP 0.0625567305644135 AtSWEET13//ATSUC4 GO:0015770 sucrose transport BP 0.0625567305644135 AtSWEET13//ATSUC4 GO:0015772 oligosaccharide transport BP 0.0625567305644135 AtSWEET13//ATSUC4 GO:0016119 carotene metabolic process BP 0.0625567305644135 PDE181//Z-ISO GO:0009968 negative regulation of signal transducti... BP 0.0667279262085198 AGB1//RGL//GCR1//AtPFA-DSP1 GO:0010648 negative regulation of cell communicatio... BP 0.0667279262085198 AGB1//RGL//GCR1//AtPFA-DSP1 GO:0023057 negative regulation of signaling BP 0.0667279262085198 AGB1//RGL//GCR1//AtPFA-DSP1 GO:0007034 vacuolar transport BP 0.0672558900248063 CID6//AT5G61530//AT4G34180//nPAP//ATSYP51//ATI1 GO:0010074 maintenance of meristem identity BP 0.0687701537319918 CAK1AT//AGL3//BLH8 GO:0046685 response to arsenic-containing substance BP 0.0687701537319918 ATHS83//AT1G73120//PGK GO:0046246 terpene biosynthetic process BP 0.0744019064471153 PDE181//Z-ISO GO:0072529 pyrimidine-containing compound catabolic... BP 0.0744019064471153 BETA-UP//AT4G29630 GO:0009828 plant-type cell wall loosening BP 0.076260108184613 AT-EXPR//ATEXP11//ATEXPB2 GO:0019742 pentacyclic triterpenoid metabolic proce... BP 0.076260108184613 SQE1//ATSYTD//ATLUP2 GO:0019745 pentacyclic triterpenoid biosynthetic pr... BP 0.076260108184613 SQE1//ATSYTD//ATLUP2 GO:0010604 positive regulation of macromolecule met... BP 0.0775322203924192 BZIP17//ANAC101//AT5G08460//AME3//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ASHH2//ATHB-7//BGLU29 GO:0009909 regulation of flower development BP 0.0823989953038891 FWA//AT3//VIP4//AtEMF2//ATCUL4//GATA18//YUC//AT4G30130//EMB2814//EVR//ASHH2//ATC//AT2G07170 GO:0009963 positive regulation of flavonoid biosynt... BP 0.0831252502625868 AAP2//4CL.1//PGDH//AT1G64370//AT1G67870 GO:0016104 triterpenoid biosynthetic process BP 0.0840917346996161 SQE1//ATSYTD//ATLUP2 GO:0031325 positive regulation of cellular metaboli... BP 0.0856543465778667 BZIP17//ANAC101//AT5G08460//AME3//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ASHH2//ATHB-7//BGLU29 GO:0006672 ceramide metabolic process BP 0.0868900906389725 AT3G56310//AT3G24180 GO:0008356 asymmetric cell division BP 0.0868900906389725 BASL//ATSBT1.3 GO:0009112 nucleobase metabolic process BP 0.0868900906389725 BETA-UP//APT2 GO:0006281 DNA repair BP 0.0872592975766868 ATCUL4//ATRAD4//ATKU70//AT3G11100//AT3G09250//AT1G75090//EMB2814//ATREV3//AT1G51210//UBC6 GO:0071370 cellular response to gibberellin stimulu... BP 0.0900876541005384 ATMYB57//RGL//GCR1//AT1G62660 GO:0010628 positive regulation of gene expression BP 0.0903929604259902 BZIP17//ANAC101//AT5G08460//AME3//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29 GO:1901575 organic substance catabolic process BP 0.0913806685450901 ATLDA//BETA-UP//AT5G58370//ATNMT1//AT5G53360//MAB1//CI51//AT5G03905//AT3G63510//AT3G56310//ACT12//ATUBP3//AT4G34180//nPAP//AT4G29630//PFK3//AT4G20930//ATUBP6//4CL.1//AT1G66620//UBC19//AT3G24180//ATNUDX26//PAL4//PGDH//PLDALPHA4//CAT9//ETHE1//AT1G17340//ATPAE1//PGK//PEX6//NSH2//AtLpxB//ACR10//UBQ13//AT1G12050//LIP2//ATPSAT1//AT1G62660//LAC6//AtCYS2//UBC6//AT2G25740//ATPEX10 GO:1901661 quinone metabolic process BP 0.0922509171215484 AT5G53920//ATHST//AAE14 GO:1901663 quinone biosynthetic process BP 0.0922509171215484 AT5G53920//ATHST//AAE14 GO:0044767 single-organism developmental process BP 0.0944362550766445 FWA//AXR5//AT-EXPR//IAA14//ATSYTD//AT5G10660//AT3//AT5G25770//ATHDH//ANAC101//APRR1//VIP4//BASL//AtRPP30//AT5G58100//ATNMT1//LOP1//AT5G53360//AtEMF2//EYE//AT5G48210//HB-7//ATCUL4//ROXY2//LEP//AT5G10420//CI51//ATGRP-7//AT5G05800//JKD//ATCAX4//CYCP3;2//ATGDI2//SEC15A//AT3G56310//GATA18//EDD//ACT12//ATNACK2//AT4G37295//AGB1//EDA9//YUC//AT4G30130//AT4G29030//CAK1AT//PFK3//GXM2//ATLP-1//ATUBP6//AT1G66620//AT3G11100//UBC19//AT1G24620//LWD2//AtPERK3//IAA19//ATDFC//AT3G01570//ATMYB57//PLDALPHA4//RGL//GCR2//ATROPGEF12//EMB2814//ATMYB2//RHON1//AT1G06830//ETHE1//ATEXP11//GCR1//ATPAE1//ATSYP51//FZL//NSH2//EVR//AT2G42560//RNS3//AT2G03740//AGL3//BLH8//ATMST1//AT1G02110//SWEETIE//ASHH2//ATEXPB2//AT1G03620//BCP1//ATPSAT1//AGC2-3//ATTOC132//AT2G21045//AtGRF6//AtCYS2//ATC//AT2G07170//NGA1//AT2G45750//ATI1//ATPEX10" GO:0055085 transmembrane transport BP 0.0944532677931486 COPT3//ATTIP2;3//ATKCO2//PHT1;6//AT5G17700//AT5G10420//ATCAX4//AT3G56310//ZIFL2//AT4G38380//ATHAK5//BASS5//ATCLC-B//AT3G20460//CAT9//ATKEA1//ATMGT1//ZIP10//AT1G23300//PEX6//ATCCX4//ATCNGC12//ATSUC4//AT2G21045//ATPEX10 GO:0010557 positive regulation of macromolecule bio... BP 0.0949763401184751 BZIP17//ANAC101//AT5G08460//AME3//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29 GO:0032502 developmental process BP 0.0962712381198151 FWA//AXR5//AT-EXPR//IAA14//ATSYTD//AT5G10660//AT3//AT5G25770//ATHDH//ANAC101//APRR1//VIP4//BASL//AtRPP30//AT5G58100//ATNMT1//LOP1//AT5G53360//AtEMF2//EYE//AT5G48210//HB-7//ATCUL4//ROXY2//LEP//AT5G10420//CI51//ATGRP-7//AT5G05800//JKD//ATCAX4//CYCP3;2//ATGDI2//SEC15A//AT3G56310//GATA18//EDD//ACT12//ATNACK2//AT4G37295//AGB1//EDA9//YUC//AT4G30130//AT4G29030//CAK1AT//PFK3//GXM2//ATLP-1//ATUBP6//AT1G66620//AT3G11100//UBC19//AT1G24620//LWD2//AtPERK3//IAA19//ATDFC//AT3G01570//ATMYB57//PLDALPHA4//RGL//GCR2//ATROPGEF12//EMB2814//ATMYB2//RHON1//AT1G06830//ETHE1//ATEXP11//GCR1//ATPAE1//ASL9//ATSYP51//FZL//NSH2//EVR//AT2G42560//RNS3//AT2G03740//AGL3//BLH8//ATMST1//AT1G02110//SWEETIE//ASHH2//AT1G09460//ATEXPB2//AT1G03620//BCP1//ATPSAT1//AGC2-3//ATTOC132//AT2G21045//AtGRF6//AtCYS2//ATC//AT2G07170//NGA1//AT2G45750//ATI1//ATPEX10 GO:0000041 transition metal ion transport BP 0.0965828968982692 COPT3//ATTIP2;3//AT5G23830//ATCAX4//AT3G21710//ZIP10//AT1G08670//AT1G62660//AT2G21045//ATC GO:0001763 morphogenesis of a branching structure BP 0.0999473257882997 BLH8//ASHH2 GO:0006558 L-phenylalanine metabolic process BP 0.0999473257882997 PAL4//GCR1 GO:0010223 secondary shoot formation BP 0.0999473257882997 BLH8//ASHH2 GO:0010346 shoot axis formation BP 0.0999473257882997 BLH8//ASHH2 GO:1902221 erythrose 4-phosphate/phosphoenolpyruvat... BP 0.0999473257882997 PAL4//GCR1 GO:0045491 xylan metabolic process BP 0.100193509950932 GUT1//ATTIP2;3//AtMYB43//GXM2//AT3G21710//PAL4//AT1G72230//AT1G72220//ICDH GO:0006722 triterpenoid metabolic process BP 0.100722986886548 SQE1//ATSYTD//ATLUP2 GO:0019827 stem cell maintenance BP 0.100722986886548 CAK1AT//AGL3//BLH8 GO:0042181 ketone biosynthetic process BP 0.100722986886548 AT5G53920//ATHST//AAE14 GO:0046173 polyol biosynthetic process BP 0.100722986886548 AT3G55190//AT1G55960//GCR1 GO:0048863 stem cell differentiation BP 0.100722986886548 CAK1AT//AGL3//BLH8 GO:0048864 stem cell development BP 0.100722986886548 CAK1AT//AGL3//BLH8 GO:0009739 response to gibberellin BP 0.101524159398435 LEP//ATMYB57//RGL//GCR1//AT2G31730//AT1G62660 GO:0031328 positive regulation of cellular biosynth... BP 0.102121598416175 BZIP17//ANAC101//AT5G08460//AME3//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29 GO:0045893 positive regulation of transcription, DN... BP 0.108026991304719 BZIP17//ANAC101//AT5G08460//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29 GO:0051254 positive regulation of RNA metabolic pro... BP 0.108026991304719 BZIP17//ANAC101//AT5G08460//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29 GO:1902680 positive regulation of RNA biosynthetic ... BP 0.108026991304719 BZIP17//ANAC101//AT5G08460//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29 GO:1903508 positive regulation of nucleic acid-temp... BP 0.108026991304719 BZIP17//ANAC101//AT5G08460//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29 GO:0050793 regulation of developmental process BP 0.109300041062268 FWA//AT3//VIP4//AtEMF2//HB-7//ATCUL4//LEP//JKD//GATA18//EDD//YUC//AT4G30130//CAK1AT//ATLP-1//UBC19//AtPERK3//ATROPGEF12//EMB2814//EVR//AGL3//BLH8//ASHH2//AT1G03620//ATC//AT2G07170 GO:0009787 regulation of abscisic acid-activated si... BP 0.109492840095989 AGB1//GCR2//GCR1 GO:0009788 negative regulation of abscisic acid-act... BP 0.113504680920368 AGB1//GCR1 GO:0032957 inositol trisphosphate metabolic process BP 0.113504680920368 AT1G17340//GCR1 GO:1901420 negative regulation of response to alcoh... BP 0.113504680920368 AGB1//GCR1 GO:0010410 hemicellulose metabolic process BP 0.114837850112803 GUT1//ATTIP2;3//AtMYB43//GXM2//AT3G21710//PAL4//AT1G72230//AT1G72220//ICDH GO:0006855 drug transmembrane transport BP 0.116813128895573 AT5G17700//AT5G10420//AT4G38380//AT1G23300 GO:0007018 microtubule-based movement BP 0.118545043911307 ATNACK2//AT2G21300//AT1G09170 GO:1901419 regulation of response to alcohol BP 0.118545043911307 AGB1//GCR2//GCR1 GO:0009791 post-embryonic development BP 0.119730872571627 FWA//AXR5//IAA14//AT3//APRR1//VIP4//BASL//AtEMF2//EYE//HB-7//ATCUL4//ROXY2//LEP//AT5G05800//JKD//CYCP3;2//ATGDI2//GATA18//EDD//AGB1//YUC//AT4G30130//AT4G29030//CAK1AT//ATUBP6//AT3G11100//LWD2//IAA19//ATDFC//AT3G01570//ATMYB57//PLDALPHA4//RGL//GCR2//ATROPGEF12//EMB2814//RHON1//AT1G06830//ETHE1//GCR1//ATPAE1//FZL//EVR//AT2G42560//AT2G03740//AGL3//BLH8//ATMST1//AT1G02110//SWEETIE//ASHH2//AGC2-3//ATTOC132//AtCYS2//ATC//AT2G07170//NGA1//ATPEX10 GO:0030001 metal ion transport BP 0.121625845024559 AAP2//COPT3//ATTIP2;3//ATKCO2//AT5G41330//AT5G23830//ATCAX4//AT3G56310//ATHAK5//BASS5//AT3G21710//ATKEA1//ATMGT1//ZIP10//AT1G08670//AT1G62660//AT2G21045//NAKR2//ATC GO:0045935 positive regulation of nucleobase-contai... BP 0.12163779301814 BZIP17//ANAC101//AT5G08460//GATA9//ATIPT6//ATUBP6//UMAMIT23//ATMYB2//RHON1//ATSPL14//FZL//AT1G02110//ATREV3//ATHB-7//BGLU29