GOID TERM ONTOLOGY pValue Genes GO:0035725 sodium ion transmembrane transport BP 0.0145644933494188 ATHKT1//ATCHX19//ATCHX2 GO:0006814 sodium ion transport BP 0.0203476515843309 ATHKT1//ATCHX19//ATCHX2 GO:0006801 superoxide metabolic process BP 0.0204167033501196 FSD3//AT3G56350 GO:0046482 para-aminobenzoic acid metabolic process BP 0.0204167033501196 ATCSLE1//PVA12 GO:0006261 DNA-dependent DNA replication BP 0.0208629357147521 RECQSIM//RAD5//CHR17//AT4G31210//AT4G21820//ATPCNA1//AtELP2 GO:0043543 protein acylation BP 0.0243987178651302 AT1G67800//AT5G58610//ATOFP1//AT3G61610//AT4G31020//LAG13//RFL1//BSK4//AtELP2//AT1G54610//AT2G01790 GO:0032392 DNA geometric change BP 0.0245854080445739 CSDP1//AT4G31210 GO:0032508 DNA duplex unwinding BP 0.0245854080445739 CSDP1//AT4G31210 GO:0035194 posttranscriptional gene silencing by RN... BP 0.0253423586373701 CHR17//ATSMC2//ANT//AT4G21820//ABH1//AT1G54610//ATRAD50 GO:0016441 posttranscriptional gene silencing BP 0.0293698890384144 CHR17//ATSMC2//ANT//AT4G21820//ABH1//AT1G54610//ATRAD50 GO:0098660 inorganic ion transmembrane transport BP 0.0317831022488011 ATHKT1//NIP7;1//ATCHX19//ATCHX2//KUP10 GO:0006498 N-terminal protein lipidation BP 0.0348000018656729 AT1G67800//AT5G58610//ATOFP1//AT3G61610//AT4G31020//LAG13//RFL1//BSK4//AT1G54610//AT2G01790 GO:0006499 N-terminal protein myristoylation BP 0.0348000018656729 AT1G67800//AT5G58610//ATOFP1//AT3G61610//AT4G31020//LAG13//RFL1//BSK4//AT1G54610//AT2G01790 GO:0018377 protein myristoylation BP 0.0348000018656729 AT1G67800//AT5G58610//ATOFP1//AT3G61610//AT4G31020//LAG13//RFL1//BSK4//AT1G54610//AT2G01790 GO:0048532 anatomical structure arrangement BP 0.0351507998750097 emb2473//ANT//ATWOX14//AT1G56350//AT1G33055//ABH1//SPL10//ATRAD50 GO:0031365 N-terminal protein amino acid modificati... BP 0.0375336103866295 AT1G67800//AT5G58610//ATOFP1//AT3G61610//AT4G31020//LAG13//RFL1//BSK4//AT1G54610//AT2G01790 GO:0051276 chromosome organization BP 0.0383279463607372 CHR42//AT5G17160//AT5G15610//emb2473//CHR17//ATSMC2//ANT//CSDP1//AT4G31210//AT4G21820//AT4G11160//AtGRF5//AT3G02650//ATPCNA1//HON5//AtELP2//ATPOT1//ABH1//ATRAD50 GO:0006497 protein lipidation BP 0.0414054690360198 AT1G67800//AT5G58610//ATOFP1//AT3G61610//AT4G31020//LAG13//RFL1//BSK4//AT1G54610//AT2G01790 GO:0042157 lipoprotein metabolic process BP 0.0414054690360198 AT1G67800//AT5G58610//ATOFP1//AT3G61610//AT4G31020//LAG13//RFL1//BSK4//AT1G54610//AT2G01790 GO:0042158 lipoprotein biosynthetic process BP 0.0414054690360198 AT1G67800//AT5G58610//ATOFP1//AT3G61610//AT4G31020//LAG13//RFL1//BSK4//AT1G54610//AT2G01790 GO:0034220 ion transmembrane transport BP 0.0417701239797242 ATHKT1//NIP7;1//ATCHX19//ATCHX2//KUP10//ATOCT2 GO:0019915 lipid storage BP 0.04211817406182 emb2473//AT1G56350//ABH1//ATRAD50 GO:0050826 response to freezing BP 0.046768754729639 emb2473//AT1G56350//ABH1//ATRAD50 GO:0033044 regulation of chromosome organization BP 0.0473647210288006 CHR42//emb2473//CHR17//AT4G11160//ATPOT1 GO:0010162 seed dormancy process BP 0.051346204332008 emb2473//AtGRF5//AT1G56350//ABH1//ATRAD50 GO:0022611 dormancy process BP 0.051346204332008 emb2473//AtGRF5//AT1G56350//ABH1//ATRAD50 GO:0007165 signal transduction BP 0.0550889954850268 AT1G67800//ATRAB2B//AT1G51890//emb2473//AT5G67130//AT5G51630//ATERF-5//ATMYB33//PYL5//AT3G56350//LHT7//RRTF1//SHB1//ZFP6//AT3G04220//AtRLP31//AT1G28160//AT1G56350//AtRLP14//AT1G52900//AT2G43850//ABH1//AtRLP29//ATRAD50//AT2G32140//PVA12//AT2G28780//PYL4 GO:0010608 posttranscriptional regulation of gene e... BP 0.056578858395289 CHR17//ATSMC2//ANT//AT4G21820//ATHSP101//ABH1//AT1G54610//ATRAD50 GO:0016246 RNA interference BP 0.0588132482134032 CHR17//ATSMC2//ANT//AT4G21820//AT1G54610//ATRAD50 GO:0006312 mitotic recombination BP 0.0614949099026783 AT5G15610//emb2473//ATRAD50 GO:0000303 response to superoxide BP 0.0616803874834211 FSD3//AT3G56350 GO:0000305 response to oxygen radical BP 0.0616803874834211 FSD3//AT3G56350 GO:0009756 carbohydrate mediated signaling BP 0.0623581016613463 emb2473//AT1G56350//ABH1//ATRAD50 GO:0010182 sugar mediated signaling pathway BP 0.0623581016613463 emb2473//AT1G56350//ABH1//ATRAD50 GO:0071322 cellular response to carbohydrate stimul... BP 0.0623581016613463 emb2473//AT1G56350//ABH1//ATRAD50 GO:0007276 gamete generation BP 0.062654912883726 AT5G15610//emb2473//ATMYB33//ANT//AtELP2//ATRAD50 GO:0009292 genetic transfer BP 0.0679350244932792 RAD5//HON5 GO:0009294 DNA mediated transformation BP 0.0679350244932792 RAD5//HON5 GO:0006863 purine nucleobase transport BP 0.0680926161534352 ATPUP3//NIP7;1//AT1G21070//AT2G29370 GO:0015851 nucleobase transport BP 0.0680926161534352 ATPUP3//NIP7;1//AT1G21070//AT2G29370 GO:0016131 brassinosteroid metabolic process BP 0.0680926161534352 AT3G43960//AT4G29270//7RED//AT1G64650 GO:0016132 brassinosteroid biosynthetic process BP 0.0680926161534352 AT3G43960//AT4G29270//7RED//AT1G64650 GO:0016128 phytosteroid metabolic process BP 0.0710588633351287 AT3G43960//AT4G29270//7RED//AT1G64650 GO:0016129 phytosteroid biosynthetic process BP 0.0710588633351287 AT3G43960//AT4G29270//7RED//AT1G64650 GO:0055046 microgametogenesis BP 0.0743885177807826 ATMYB33//KINESIN-12B GO:0009933 meristem structural organization BP 0.0773734871663926 emb2473//ANT//ATWOX14//AT1G56350//AT1G33055//ABH1//ATRAD50 GO:0048609 multicellular organismal reproductive pr... BP 0.0798602855213104 AT5G15610//emb2473//ATMYB33//ANT//AtGRF5//AT1G56350//AtELP2//ABH1//ATRAD50 GO:0051235 maintenance of location BP 0.0803469614114637 emb2473//AT1G56350//ABH1//ATRAD50 GO:0009740 gibberellic acid mediated signaling path... BP 0.0814651163901305 ATMYB33//AT3G56350//ZFP6 GO:0008202 steroid metabolic process BP 0.081736937180201 ORP4C//AT3G43960//AT4G29270//LAG13//7RED//AT1G64650 GO:0010431 seed maturation BP 0.084523939044749 emb2473//AtGRF5//AT1G56350//ABH1//ATRAD50 GO:0010476 gibberellin mediated signaling pathway BP 0.0857571213273264 ATMYB33//AT3G56350//ZFP6 GO:0071370 cellular response to gibberellin stimulu... BP 0.0857571213273264 ATMYB33//AT3G56350//ZFP6 GO:0044700 single organism signaling BP 0.0902587940078306 AT1G67800//ATRAB2B//AT1G51890//emb2473//AT5G67130//AT5G51630//ATERF-5//ATMYB33//PYL5//AT3G56350//LHT7//RRTF1//SHB1//ZFP6//AT3G04220//AtRLP31//AT1G28160//AT1G56350//AtRLP14//AT1G52900//AT2G43850//ABH1//AtRLP29//ATRAD50//AT2G32140//PVA12//AT2G28780//PYL4 GO:0023052 signaling BP 0.0920306306572952 AT1G67800//ATRAB2B//AT1G51890//emb2473//AT5G67130//AT5G51630//ATERF-5//ATMYB33//PYL5//AT3G56350//LHT7//RRTF1//SHB1//ZFP6//AT3G04220//AtRLP31//AT1G28160//AT1G56350//AtRLP14//AT1G52900//AT2G43850//ABH1//AtRLP29//ATRAD50//AT2G32140//PVA12//AT2G28780//PYL4 GO:0070887 cellular response to chemical stimulus BP 0.0961125003379251 AT1G67800//AT1G51890//emb2473//ATNRT2.4//ATERF-5//FSD3//ATMYB33//PYL5//AT3G56350//ATSMC2//LHT7//ZFP6//AT1G28160//AT1G56350//ABH1//AT1G54610//ATRAD50//PVA12//AT2G28780//PYL4 GO:0098655 cation transmembrane transport BP 0.0970857069007363 ATHKT1//ATCHX19//ATCHX2//KUP10 GO:0098662 inorganic cation transmembrane transport BP 0.0970857069007363 ATHKT1//ATCHX19//ATCHX2//KUP10 GO:1901701 cellular response to oxygen-containing c... BP 0.100063707953309 AT1G67800//AT1G51890//emb2473//ATNRT2.4//FSD3//ATMYB33//PYL5//AT3G56350//ZFP6//AT1G56350//ABH1//ATRAD50//PYL4 GO:0006305 DNA alkylation BP 0.103713904959872 CHR17//ANT//AT4G21820//ATPCNA1//AtELP2//ABH1 GO:0006306 DNA methylation BP 0.103713904959872 CHR17//ANT//AT4G21820//ATPCNA1//AtELP2//ABH1 GO:1901699 cellular response to nitrogen compound BP 0.104503752544976 ATNRT2.4//ATSMC2//ABH1//AT1G54610//ATRAD50 GO:0044728 DNA methylation or demethylation BP 0.106329942686144 CHR17//ANT//AT4G21820//ATPCNA1//AtELP2//ABH1 GO:0009067 aspartate family amino acid biosynthetic... BP 0.107850832483299 AT5G53850//CRR1//AT3G19515//ABH1 GO:0006304 DNA modification BP 0.1089800643281 CHR17//ANT//AT4G21820//ATPCNA1//AtELP2//ABH1 GO:0032504 multicellular organism reproduction BP 0.109106020452061 AT5G15610//emb2473//ATMYB33//ANT//AtGRF5//AT1G56350//AtELP2//ABH1//ATRAD50 GO:0071310 cellular response to organic substance BP 0.113911149308179 AT1G67800//AT1G51890//emb2473//ATERF-5//ATMYB33//PYL5//AT3G56350//ATSMC2//LHT7//ZFP6//AT1G28160//AT1G56350//ABH1//AT1G54610//ATRAD50//PVA12//AT2G28780//PYL4 GO:0034614 cellular response to reactive oxygen spe... BP 0.116636057129158 FSD3//AT3G56350 GO:0022412 cellular process involved in reproductio... BP 0.120078667203902 AT5G15610//emb2473//ATMYB33//AtELP2//ATRAD50 GO:0010089 xylem development BP 0.123291075916151 TBL36//ANT//AT4G31020 GO:0006813 potassium ion transport BP 0.124165602965297 ATHKT1//KUP10 GO:0010074 maintenance of meristem identity BP 0.124165602965297 ANT//AtELP2 GO:0019953 sexual reproduction BP 0.131377379257502 AT5G15610//emb2473//ATMYB33//ANT//AtELP2//ATRAD50 GO:0010557 positive regulation of macromolecule bio... BP 0.139023011538669 ATMYB12//CRR1//ATERF-5//ATMYB33//AT3G24490//ATHSP101//FLN2//ATPOT1//SPL10 GO:0044764 multi-organism cellular process BP 0.139556062025899 RAD5//HON5 GO:0044703 multi-organism reproductive process BP 0.139808432595641 AT5G15610//emb2473//ATMYB33//ANT//ATCSLD4//AT4G21323//AGP11//ATISU2//AtELP2//ATCHX2//ATRAD50 GO:0006952 defense response BP 0.141970749158622 AT1G67800//AT1G51890//CRR1//AT5G51630//ATERF-5//ATSMC2//LHT7//RRTF1//CRK23//AT3G19515//AT3G04220//BGLU23//AtRLP31//MLP168//AT1G52900//RFL1//MLP28//AtDIR5//ATCHX2//AT1G54610//AtCRT1b//ATRAD50//AT2G32140 GO:0031328 positive regulation of cellular biosynth... BP 0.145937890563329 ATMYB12//CRR1//ATERF-5//ATMYB33//AT3G24490//ATHSP101//FLN2//ATPOT1//SPL10 GO:0000911 cytokinesis by cell plate formation BP 0.14641129633618 AtTRS130//CHR17//AT4G21820//KINESIN-12B//ABH1//ATRAD50 GO:0006260 DNA replication BP 0.146772484552904 RECQSIM//RAD5//CHR17//AT4G31210//AT4G21820//ATPCNA1//AtELP2//ATPOT1 GO:2000241 regulation of reproductive process BP 0.148281078179704 AT5G15610//emb2473//SHB1//AtGRF5//AT3G02650//AT1G56350//AtELP2//ABH1//ATRAD50 GO:0035196 production of miRNAs involved in gene si... BP 0.151512685979437 ATSMC2//ABH1//AT1G54610//ATRAD50 GO:0032506 cytokinetic process BP 0.152636372748488 AtTRS130//CHR17//AT4G21820//KINESIN-12B//ABH1//ATRAD50 GO:1902410 mitotic cytokinetic process BP 0.152636372748488 AtTRS130//CHR17//AT4G21820//KINESIN-12B//ABH1//ATRAD50 GO:0006694 steroid biosynthetic process BP 0.154230977722636 AT3G43960//AT4G29270//LAG13//7RED//AT1G64650 GO:0009692 ethylene metabolic process BP 0.154667989876727 AT4G37290//RRTF1//AT2G32140 GO:0009693 ethylene biosynthetic process BP 0.154667989876727 AT4G37290//RRTF1//AT2G32140 GO:0043449 cellular alkene metabolic process BP 0.154667989876727 AT4G37290//RRTF1//AT2G32140 GO:0043450 alkene biosynthetic process BP 0.154667989876727 AT4G37290//RRTF1//AT2G32140 GO:1900673 olefin metabolic process BP 0.154667989876727 AT4G37290//RRTF1//AT2G32140 GO:1900674 olefin biosynthetic process BP 0.154667989876727 AT4G37290//RRTF1//AT2G32140 GO:0019827 stem cell maintenance BP 0.15533038419263 ANT//AtELP2 GO:0034599 cellular response to oxidative stress BP 0.15533038419263 FSD3//AT3G56350 GO:0010468 regulation of gene expression BP 0.158714143859329 ATMYB12//ATWRKY74//AGL89//AT5G58610//CRR1//ATERF-5//CHR17//ATMYB33//ATOFP1//ATSMC2//ANT//RRTF1//AT4G31805//SHB1//AT4G21820//ZFP6//ATWOX14//ATMYB71//AT3G24490//AtGRF5//AT1G28160//AtMYB113//ATHSP101//FLN2//ATPCNA1//AtELP2//SNL5//ANAC020//ABH1//AT1G54610//SPL10//ATRAD50//ANAC038 GO:0009086 methionine biosynthetic process BP 0.160123390474524 AT5G53850//AT3G19515//ABH1 GO:0006310 DNA recombination BP 0.162191424412706 CHR42//AT5G15610//RECQSIM//emb2473//RAD5//ATRAD50 GO:0006066 alcohol metabolic process BP 0.16233529230396 AT3G43960//AT4G29270//AT4G08170//LAG13//GDPDL5//ATNCED6//7RED//AT1G64650 GO:0048864 stem cell development BP 0.163341009411647 ANT//AtELP2 GO:0035195 gene silencing by miRNA BP 0.164441568452922 ATSMC2//ABH1//AT1G54610//ATRAD50 GO:0010604 positive regulation of macromolecule met... BP 0.167695623347815 ATMYB12//CRR1//ATERF-5//ATMYB33//AT3G24490//ATHSP101//FLN2//ATPOT1//SPL10