GOID TERM ONTOLOGY pValue Genes GO:0071407 cellular response to organic cyclic comp... BP 0.00154362947278706 At-SC35//DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//ARP4//ALD1 GO:0044419 interspecies interaction between organis... BP 0.00331699014970826 ATHMT-2//CHR40//WIN1//ARP4 GO:1901615 organic hydroxy compound metabolic proce... BP 0.00337673405845116 RPS14//ROT3//BST1//DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//AtCXE5//AT1G23450 GO:0071310 cellular response to organic substance BP 0.0058195867333118 At-SC35//DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//AT3G11960//ARP4//AT1G64710//ALD1//AT2G13150//PYL4 GO:0002376 immune system process BP 0.00613967914447251 ATWRKY48//DMR6//AT5G10760//ATHMT-2//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//LYM3//ARP4//ALD1 GO:0006955 immune response BP 0.0072323391457727 DMR6//AT5G10760//ATHMT-2//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//LYM3//ARP4//ALD1 GO:1901617 organic hydroxy compound biosynthetic pr... BP 0.00729629075719626 ROT3//DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//AtCXE5//AT1G23450 GO:0009697 salicylic acid biosynthetic process BP 0.0102251018380172 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090 GO:0070887 cellular response to chemical stimulus BP 0.0111205140644476 At-SC35//DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//AT3G11960//ARP4//AT1G64710//ALD1//AT2G13150//PYL4 GO:0046189 phenol-containing compound biosynthetic ... BP 0.0114475109588547 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090 GO:0009863 salicylic acid mediated signaling pathwa... BP 0.0114955917274955 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//ALD1 GO:0098542 defense response to other organism BP 0.0116532049202536 ATWRKY48//DMR6//AT5G10760//ATHMT-2//AT3G49350//AT3G47480//AT1G66090//CHR40//WIN1//ARP4//ALD1 GO:0071446 cellular response to salicylic acid stim... BP 0.0117587322474542 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//ALD1 GO:0009616 virus induced gene silencing BP 0.0119283699396329 ATHMT-2//CHR40//ARP4 GO:0052018 modulation by symbiont of RNA levels in ... BP 0.0119283699396329 ATHMT-2//CHR40//ARP4 GO:0052249 modulation of RNA levels in other organi... BP 0.0119283699396329 ATHMT-2//CHR40//ARP4 GO:0009696 salicylic acid metabolic process BP 0.0131113873615516 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090 GO:0098586 cellular response to virus BP 0.0132402406077826 ATHMT-2//CHR40//ARP4 GO:0018958 phenol-containing compound metabolic pro... BP 0.0153155866990646 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090 GO:0031348 negative regulation of defense response BP 0.0153155866990646 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090 GO:0035821 modification of morphology or physiology... BP 0.0153568682687154 ATHMT-2//CHR40//ARP4 GO:0044003 modification by symbiont of host morphol... BP 0.0153568682687154 ATHMT-2//CHR40//ARP4 GO:0051817 modification of morphology or physiology... BP 0.0153568682687154 ATHMT-2//CHR40//ARP4 GO:0002252 immune effector process BP 0.0173323214885155 ATWRKY48//ATHMT-2//AT3G47480//CHR40//ARP4 GO:0051701 interaction with host BP 0.017653705062091 ATHMT-2//CHR40//ARP4 GO:0045087 innate immune response BP 0.0177617527213813 DMR6//AT5G10760//ATHMT-2//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//ARP4//ALD1 GO:0042537 benzene-containing compound metabolic pr... BP 0.0181861636272531 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090 GO:0008380 RNA splicing BP 0.0186233578474902 At-SC35//ATHMT-2//At-SR34a//AT;CDCKD;3//ARP4 GO:0035196 production of miRNAs involved in gene si... BP 0.0201320408765096 At-SC35//CHR40//ARP4 GO:0006260 DNA replication BP 0.0218792219499451 ATIM//ATHMT-2//AT;CDCKD;3//POK1//ATRPA32B GO:0014070 response to organic cyclic compound BP 0.0220542670650387 At-SC35//DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//ARP4//ALD1 GO:0006259 DNA metabolic process BP 0.0221587581290161 ATIM//ATHMT-2//ATBRCA1//AT;CDCKD;3//POK1//ATRPA32B//ARP4//ATSRP3 GO:0044403 symbiosis, encompassing mutualism throug... BP 0.0227926175094406 ATHMT-2//CHR40//ARP4 GO:1901701 cellular response to oxygen-containing c... BP 0.023221683838299 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//AT3G11960//ARP4//ALD1//PYL4 GO:0035195 gene silencing by miRNA BP 0.0237200283360945 At-SC35//CHR40//ARP4 GO:0009690 cytokinin metabolic process BP 0.0243177186590707 ATCKX6//AT4G00940 GO:0030422 production of siRNA involved in RNA inte... BP 0.0246677143101278 At-SC35//CHR40//ARP4 GO:0006952 defense response BP 0.0266287331499457 ATWRKY48//DMR6//AT5G10760//ATHMT-2//AT3G49350//AT3G47480//AT4G23470//AT1G66090//ATMLO9//CHR40//WIN1//ARP4//ALD1//LCR72 GO:0031050 dsRNA fragmentation BP 0.0276323038299582 At-SC35//CHR40//ARP4 GO:0043331 response to dsRNA BP 0.0276323038299582 At-SC35//CHR40//ARP4 GO:0070918 production of small RNA involved in gene... BP 0.0276323038299582 At-SC35//CHR40//ARP4 GO:0071359 cellular response to dsRNA BP 0.0276323038299582 At-SC35//CHR40//ARP4 GO:0051607 defense response to virus BP 0.0297097587086413 ATHMT-2//CHR40//ARP4 GO:0009751 response to salicylic acid BP 0.0352867138997088 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//ALD1 GO:0044283 small molecule biosynthetic process BP 0.0379245682812099 ROT3//DMR6//ATHMT-2//AT3G49350//AT3G47480//AT4G23470//AT1G66090//WIN1//AtCXE5//AT1G23450//ALD1 GO:0010033 response to organic substance BP 0.0387878563453095 At-SC35//ATWRKY48//PBB2//DMR6//AT3G49350//AT3G47480//AT4G37290//AT4G28440//AT4G23470//AT4G08790//AXR4//AT1G66090//CHR40//AT3G11960//ARP4//AT1G64710//ALD1//AT2G13150//PYL4 GO:0044700 single organism signaling BP 0.0398320230098345 ATWRKY48//DMR6//AT5G10760//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//AT3G11960//ARP4//AT1G64710//ALD1//AT2G13150//CIPK22//PYL4 GO:1901699 cellular response to nitrogen compound BP 0.0400495169007711 At-SC35//CHR40//ARP4 GO:0023052 signaling BP 0.0404416440491509 ATWRKY48//DMR6//AT5G10760//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//AT3G11960//ARP4//AT1G64710//ALD1//AT2G13150//CIPK22//PYL4 GO:0016053 organic acid biosynthetic process BP 0.0417721554832184 DMR6//ATHMT-2//AT3G49350//AT3G47480//AT4G23470//AT1G66090//WIN1//AT1G23450//ALD1 GO:0046394 carboxylic acid biosynthetic process BP 0.0417721554832184 DMR6//ATHMT-2//AT3G49350//AT3G47480//AT4G23470//AT1G66090//WIN1//AT1G23450//ALD1 GO:0048585 negative regulation of response to stimu... BP 0.0428770911001852 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090 GO:0042742 defense response to bacterium BP 0.043630906052268 ATWRKY48//DMR6//AT3G47480//WIN1//ALD1 GO:0010050 vegetative phase change BP 0.0443966395711518 ATHMT-2//ARP4 GO:0009615 response to virus BP 0.0451577070151894 ATHMT-2//CHR40//ARP4 GO:0016246 RNA interference BP 0.0464831568151812 At-SC35//CHR40//ARP4 GO:0048519 negative regulation of biological proces... BP 0.0469122444863097 At-SC35//DMR6//AT3G49350//AT3G47480//AT4G23470//AT;CDCKD;3//AT1G66090//CHR40//MAN1//ARP4//ATSRP3 GO:0000086 G2/M transition of mitotic cell cycle BP 0.0489533082118279 AT;CDCKD;3//POK1 GO:0010389 regulation of G2/M transition of mitotic... BP 0.0489533082118279 AT;CDCKD;3//POK1 GO:0032269 negative regulation of cellular protein ... BP 0.0489533082118279 AT;CDCKD;3//ATSRP3 GO:0044839 cell cycle G2/M phase transition BP 0.0489533082118279 AT;CDCKD;3//POK1 GO:0051248 negative regulation of protein metabolic... BP 0.0489533082118279 AT;CDCKD;3//ATSRP3 GO:1902749 regulation of cell cycle G2/M phase tran... BP 0.0489533082118279 AT;CDCKD;3//POK1 GO:1901698 response to nitrogen compound BP 0.0502844839438323 At-SC35//ATWRKY48//DMR6//AT3G47480//AT4G23470//AT1G66090//CHR40//ARP4 GO:0016310 phosphorylation BP 0.0516929966657405 AT1G51860//BST1//DMR6//AT5G18190//AT5G10760//AT3G47480//AT;CDCKD;3//ARP4//AT1G30640//AT2G42960//CIPK22 GO:0071229 cellular response to acid chemical BP 0.0524766105134918 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//ALD1//PYL4 GO:1901987 regulation of cell cycle phase transitio... BP 0.0536718136439087 AT;CDCKD;3//POK1 GO:1901990 regulation of mitotic cell cycle phase t... BP 0.0536718136439087 AT;CDCKD;3//POK1 GO:0044770 cell cycle phase transition BP 0.0560894159083643 AT;CDCKD;3//POK1 GO:0044772 mitotic cell cycle phase transition BP 0.0560894159083643 AT;CDCKD;3//POK1 GO:0035194 posttranscriptional gene silencing by RN... BP 0.0562926544230567 At-SC35//CHR40//ARP4 GO:0007165 signal transduction BP 0.0576856104981051 ATWRKY48//DMR6//AT5G10760//AT3G49350//AT3G47480//AT4G23470//AT1G66090//AT3G11960//ARP4//AT1G64710//ALD1//AT2G13150//CIPK22//PYL4 GO:0007154 cell communication BP 0.0605811472989633 ATWRKY48//DMR6//AT5G10760//AT3G49350//AT3G47480//AT4G23470//AT1G66090//CHR40//AT3G11960//MAN1//ARP4//AT1G64710//ALD1//AT2G13150//CIPK22//PYL4 GO:0016441 posttranscriptional gene silencing BP 0.0607754505065575 At-SC35//CHR40//ARP4 GO:0072330 monocarboxylic acid biosynthetic process BP 0.0617186888904507 DMR6//AT3G49350//AT3G47480//AT4G23470//AT1G66090//AT1G23450 GO:0007267 cell-cell signaling BP 0.0635647175546793 CHR40//ARP4 GO:0006396 RNA processing BP 0.067447436810016 At-SC35//ATHMT-2//At-SR34a//AT;CDCKD;3//CHR40//ARP4 GO:0043207 response to external biotic stimulus BP 0.0696331163509745 ATWRKY48//DMR6//AT5G10760//ATHMT-2//AT3G49350//AT3G47480//AT1G66090//CHR40//WIN1//ARP4//ALD1 GO:0051707 response to other organism BP 0.0696331163509745 ATWRKY48//DMR6//AT5G10760//ATHMT-2//AT3G49350//AT3G47480//AT1G66090//CHR40//WIN1//ARP4//ALD1 GO:0010605 negative regulation of macromolecule met... BP 0.0699953991330447 At-SC35//AT;CDCKD;3//CHR40//MAN1//ARP4//ATSRP3 GO:0009607 response to biotic stimulus BP 0.0701829718618945 ATWRKY48//DMR6//AT5G10760//ATHMT-2//AT3G49350//AT3G47480//AT1G66090//CHR40//WIN1//ARP4//ALD1 GO:0010267 production of ta-siRNAs involved in RNA ... BP 0.0740182465107486 CHR40//ARP4 GO:0043086 negative regulation of catalytic activit... BP 0.0767128501567491 AT;CDCKD;3//ATSRP3 GO:0048825 cotyledon development BP 0.0794383045564013 AT3G11960//HDG3 GO:0034976 response to endoplasmic reticulum stress BP 0.08145435439537 DMR6//AT5G10760//AT3G49350//AT3G47480//AT2G13150 GO:0044092 negative regulation of molecular functio... BP 0.0821938120917796 AT;CDCKD;3//ATSRP3 GO:0010817 regulation of hormone levels BP 0.0826256236895671 ROT3//ATCKX6//AT4G00940//AXR4 GO:0008152 metabolic process BP 0.0891568817548079 RPS14//AT2G23230//ROT3//AT1G51860//BST1//At-SC35//AT5G54830//ATIM//ATWRKY48//PBB2//DMR6//AT5G18190//AT5G10760//ATHMT-2//ATCKX6//BGLU27//At-SR34a//AT3G49350//AT3G47480//AT4G37290//AT4G35670//AT4G33280//AT4G28440//AT4G28180//AT4G23470//ATMSRB9//ATBRCA1//AT4G08790//AT4G00940//AT;CDCKD;3//AT1G66090//CHR40//AtSDR4//POK1//ATRPA32B//AT3G02790//AT3G11960//RPL18//MAN1//LYM3//CCOAMT//AT1G30080//WIN1//AtCXE5//ARP4//AT1G56030//AT1G02830//ATSRP3//AT1G23450//AT1G64710//AT1G30640//AT1G43140//AT2G42960//AT2G25355//ALD1//AT2G13150//GGPS4//HDG3//CIPK22 GO:0006553 lysine metabolic process BP 0.0897548102988442 658_ GO:0009085 lysine biosynthetic process BP 0.0897548102988442 658_ GO:0009089 lysine biosynthetic process via diaminop... BP 0.0897548102988442 658_ GO:0010955 negative regulation of protein processin... BP 0.0897548102988442 332_ GO:0045861 negative regulation of proteolysis BP 0.0897548102988442 332_ GO:0046451 diaminopimelate metabolic process BP 0.0897548102988442 658_ GO:0070613 regulation of protein processing BP 0.0897548102988442 332_ GO:0007346 regulation of mitotic cell cycle BP 0.0935008353534428 AT;CDCKD;3//POK1 GO:0006066 alcohol metabolic process BP 0.0964341991567679 ROT3//BST1//AtCXE5//AT1G23450 GO:0009084 glutamine family amino acid biosynthetic... BP 0.0982796784334757 286_ GO:0030162 regulation of proteolysis BP 0.0982796784334757 332_ GO:0051716 cellular response to stimulus BP 0.0995506830551901 At-SC35//ATWRKY48//DMR6//AT5G10760//AT3G49350//AT3G47480//AT4G23470//ATBRCA1//AT1G66090//CHR40//AT3G11960//MAN1//ARP4//ATSRP3//AT1G64710//ALD1//AT2G13150//CIPK22//PYL4