GOID TERM ONTOLOGY pValue Genes GO:0006857 oligopeptide transport BP 0.0037067652014995 OBF4//ATPTR5//GGT2//AT1G72125//NRT1.5//YSL8//AT1G27040 GO:0015833 peptide transport BP 0.0037067652014995 OBF4//ATPTR5//GGT2//AT1G72125//NRT1.5//YSL8//AT1G27040 GO:0001708 cell fate specification BP 0.00446242640976753 DIM1A//AFO//AT5G54220//EMS1//YAB3 GO:0010431 seed maturation BP 0.00507080569819619 AFO//AT5G12410//TUB6//AT3G50850//ARAC8//ATICE1//AT3G08030//AT1G03890//ATEPR1 GO:0010162 seed dormancy process BP 0.00642539795113189 AFO//AT5G12410//TUB6//AT3G50850//ARAC8//ATICE1//AT3G08030//ATEPR1 GO:0022611 dormancy process BP 0.00642539795113189 AFO//AT5G12410//TUB6//AT3G50850//ARAC8//ATICE1//AT3G08030//ATEPR1 GO:0042886 amide transport BP 0.00684468074345691 OBF4//ATPTR5//GGT2//AT1G72125//NRT1.5//YSL8//AT1G27040 GO:0015994 chlorophyll metabolic process BP 0.00768969503242213 ABCB25//PORA//AT5G53490//AT5G52970//PORB//AT3G08030//AT1G73750//ALB-1V//AVDE1//AtOZF1 GO:0045165 cell fate commitment BP 0.00823811065128807 DIM1A//AFO//AT5G54220//EMS1//YAB3 GO:0015995 chlorophyll biosynthetic process BP 0.0167029504680425 ABCB25//PORA//AT5G53490//AT5G52970//PORB//AT3G08030//ALB-1V//AVDE1 GO:0006414 translational elongation BP 0.0211258521532382 AT5G57290//AT5G40040//AT4G00810//AT3G11250 GO:0009933 meristem structural organization BP 0.0231129917796088 AFO//AT5G12410//TMO6//AT5G49990//ATICE1//CVP2//AT1G33055//AT1G62770//ATEPR1 GO:0006778 porphyrin-containing compound metabolic ... BP 0.0235860621011639 ABCB25//PORA//AT5G53490//AT5G52970//PORB//AT3G08030//AT1G73750//ALB-1V//AVDE1//AtOZF1 GO:0033013 tetrapyrrole metabolic process BP 0.0245990862307935 ABCB25//PORA//AT5G53490//AT5G52970//PORB//AT3G08030//AT1G73750//ALB-1V//AVDE1//AtOZF1 GO:0048532 anatomical structure arrangement BP 0.0253285778885947 AFO//AT5G12410//TMO6//AT5G49990//ATICE1//CVP2//AT1G33055//AT1G62770//ATEPR1 GO:0045935 positive regulation of nucleobase-contai... BP 0.0259240301018593 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//ATBT2//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0009944 polarity specification of adaxial/abaxia... BP 0.0271569880775994 AFO//TMO6//AT5G49990//CVP2//AT1G33055 GO:0065001 specification of axis polarity BP 0.0271569880775994 AFO//TMO6//AT5G49990//CVP2//AT1G33055 GO:0051173 positive regulation of nitrogen compound... BP 0.0282508180263035 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//ATBT2//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0010154 fruit development BP 0.0286903895676401 AFO//AT5G12410//ATOEP80//AT5G52970//STPL//ARF8//Cpn60alpha2//TUB6//MEE60//AT3G50790//AT3G50850//ARAC8//MEE59//YAB3//emb2738//ATICE1//AT3G08030//CVP2//AT1G03890//ATEPR1//ABR GO:0009943 adaxial/abaxial axis specification BP 0.0292523869294448 AFO//TMO6//AT5G49990//CVP2//AT1G33055 GO:0042440 pigment metabolic process BP 0.0296922890994939 ABCB25//PORA//AT5G53490//AT5G52970//PORB//AT3G08030//ATMYBL2//AT1G73750//ALB-1V//PUR2//AVDE1//AtOZF1 GO:0010557 positive regulation of macromolecule bio... BP 0.0298862443855828 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//ATBT2//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0009756 carbohydrate mediated signaling BP 0.0314472065481986 AT5G12410//RNPS1//ATBT2//ATICE1//ATEPR1 GO:0010182 sugar mediated signaling pathway BP 0.0314472065481986 AT5G12410//RNPS1//ATBT2//ATICE1//ATEPR1 GO:0031328 positive regulation of cellular biosynth... BP 0.0324696261878993 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//ATBT2//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0009734 auxin-activated signaling pathway BP 0.0340927105891282 ATBT2//ABCB18//NRT1.5//ABR GO:0046685 response to arsenic-containing substance BP 0.0356675995307618 ADS1//ATBXL2//AT1G01910 GO:0048869 cellular developmental process BP 0.0384366175839781 DIM1A//AFO//LBD18//AT5G12410//ACYB-2//LSH1//ACBP5//AT5G54220//TUB6//EMS1//AT5G02160//ATPTR5//GIG1//SHL1//CYCD5;1//PORB//AT4G25790//ATROPGEF9//AT4G02370//ATRPS13A//YAB3//AT3G28770//BGAL1//CYCP2;1//ATICE1//XXT5//ATEXP11//HYP7//AT2G22180//AVDE1//PLT2//ATEPR1//AtPERK4//ABR GO:0009798 axis specification BP 0.0386385536353219 AFO//TMO6//AT5G49990//CVP2//AT1G33055 GO:0009955 adaxial/abaxial pattern specification BP 0.0386385536353219 AFO//TMO6//AT5G49990//CVP2//AT1G33055 GO:0048609 multicellular organismal reproductive pr... BP 0.0392407774504667 AFO//AT5G12410//ACBP5//TUB6//GIG1//AT3G50850//ARAC8//ATICE1//AT3G08030//AT1G03890//ATEPR1 GO:0010604 positive regulation of macromolecule met... BP 0.0401584376483469 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//ATBT2//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0045893 positive regulation of transcription, DN... BP 0.0430456334705522 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0051254 positive regulation of RNA metabolic pro... BP 0.0430456334705522 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:1902680 positive regulation of RNA biosynthetic ... BP 0.0430456334705522 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:1903508 positive regulation of nucleic acid-temp... BP 0.0430456334705522 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0071365 cellular response to auxin stimulus BP 0.0436714581828237 ATBT2//ABCB18//NRT1.5//ABR GO:0031325 positive regulation of cellular metaboli... BP 0.0444604597992225 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//ATBT2//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0006364 rRNA processing BP 0.0452547659542467 DIM1A//AT5G53490//AT5G52970//ATFBR1//AT5G52490//emb2738//CCB1//AT1G73940//PSAO//LQY1//AVDE1//PSB27 GO:0016072 rRNA metabolic process BP 0.0452547659542467 DIM1A//AT5G53490//AT5G52970//ATFBR1//AT5G52490//emb2738//CCB1//AT1G73940//PSAO//LQY1//AVDE1//PSB27 GO:0042445 hormone metabolic process BP 0.0453164972435513 RGLG2//TUB6//AT4G29270//ATPME3//ATMES17//3BETAHSD/D1//ALB-1V//CYP702A1//ATCKX2//AT2G34590 GO:0006779 porphyrin-containing compound biosynthet... BP 0.0459606481446595 ABCB25//PORA//AT5G53490//AT5G52970//PORB//AT3G08030//ALB-1V//AVDE1 GO:0071322 cellular response to carbohydrate stimul... BP 0.0467566196647482 AT5G12410//RNPS1//ATBT2//ATICE1//ATEPR1 GO:0010628 positive regulation of gene expression BP 0.049009674514423 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0009690 cytokinin metabolic process BP 0.049523113235238 RGLG2//ALB-1V//ATCKX2 GO:0009061 anaerobic respiration BP 0.0502598897153314 AT3G10020//AT1G33055 GO:0033014 tetrapyrrole biosynthetic process BP 0.0518705573110013 ABCB25//PORA//AT5G53490//AT5G52970//PORB//AT3G08030//ALB-1V//AVDE1 GO:0032504 multicellular organism reproduction BP 0.0525289875357796 AFO//AT5G12410//ACBP5//TUB6//GIG1//AT3G50850//ARAC8//ATICE1//AT3G08030//AT1G03890//ATEPR1 GO:1901564 organonitrogen compound metabolic proces... BP 0.0543336515150689 AT5G12410//ACYB-2//ABCB25//PORA//AT5G53490//AT5G52960//AT5G52970//Cpn60alpha2//RGLG2//AT5G13760//TUB6//AT4G39880//GGT2//AT4G28940//PORB//AT4G00590//AT1G66860//ATPME3//AT3G08030//ATMES17//PHYLLO//AT1G73750//AT1G35420//AT1G70570//IMS1//AT1G68260//NRT1.5//ALB-1V//PSAO//LQY1//AT2G05755//AT1G31220//AT2G37020//PSBR//CYP702A1//PUR2//AVDE1//ATCKX2//SSL1//PRPL35//AtOZF1 GO:0006891 intra-Golgi vesicle-mediated transport BP 0.05464321568894 ATRER1A//AT1G01910//ATRAB6A GO:0046148 pigment biosynthetic process BP 0.0554654109714302 ABCB25//PORA//AT5G53490//AT5G52970//PORB//AT3G08030//ATMYBL2//ALB-1V//PUR2//AVDE1 GO:0019915 lipid storage BP 0.0585546945328547 AT5G12410//AT5G56100//ATICE1//ATEPR1 GO:0048316 seed development BP 0.0606111537864402 AFO//AT5G12410//ATOEP80//AT5G52970//STPL//Cpn60alpha2//TUB6//MEE60//AT3G50790//AT3G50850//ARAC8//MEE59//emb2738//ATICE1//AT3G08030//CVP2//AT1G03890//ATEPR1//ABR GO:0010817 regulation of hormone levels BP 0.0644327990428256 ACYB-2//RGLG2//TUB6//AT4G29270//ABCB18//ATPME3//ATMES17//3BETAHSD/D1//ALB-1V//CYP702A1//ATCKX2//AT2G34590//ABR GO:1901565 organonitrogen compound catabolic proces... BP 0.0688370572146008 GGT2//AT4G00590//ATPME3//PHYLLO//AT1G73750//NRT1.5//CYP702A1//AVDE1//AtOZF1 GO:0006661 phosphatidylinositol biosynthetic proces... BP 0.075803485449835 AT5G44010//MEE60//AT4G05070//AtOZF1 GO:0051604 protein maturation BP 0.0774864018732142 AT5G12410//AT5G04600//AT4G00590 GO:0055072 iron ion homeostasis BP 0.0778970261661694 ABCB25//ACO1 GO:0072348 sulfur compound transport BP 0.0778970261661694 AT5G48970//GGT2 GO:0030154 cell differentiation BP 0.0789174268279729 DIM1A//AFO//LBD18//AT5G12410//ACYB-2//ACBP5//AT5G54220//TUB6//EMS1//AT5G02160//ATPTR5//SHL1//PORB//AT4G25790//ATROPGEF9//AT4G02370//ATRPS13A//YAB3//AT3G28770//BGAL1//XXT5//HYP7//AT2G22180//AVDE1//PLT2//ABR GO:0034470 ncRNA processing BP 0.0809353202605798 DIM1A//AT5G53490//AT5G52970//ATFBR1//AT5G52490//emb2738//CCB1//AT1G73940//PSAO//LQY1//AVDE1//PSB27 GO:0051186 cofactor metabolic process BP 0.0821663162213659 ABCB25//PORA//AT5G53490//AT5G52970//TUB6//PORB//AT3G08030//PHYLLO//AT1G73750//3BETAHSD/D1//ALB-1V//PSAO//LQY1//AVDE1//PRPL35//AtOZF1//AT2G34590 GO:0009765 photosynthesis, light harvesting BP 0.0837558569969284 PSAO//LQY1//PSB27 GO:0010440 stomatal lineage progression BP 0.0837558569969284 CYCD5;1//CYCP2;1//ATICE1 GO:0009891 positive regulation of biosynthetic proc... BP 0.0839934720751812 AT5G52960//ATFBR1//TINY2//AT5G08460//ATNFXL2//AT5G02160//ATBT2//GATA3//PORB//ANAC072//AT1G12630//ATICE1//HYP7//ATMYB58//AT1G62070//AVDE1 GO:0034754 cellular hormone metabolic process BP 0.0840148852326409 RGLG2//ATPME3//ATMES17//ALB-1V//CYP702A1//ATCKX2 GO:0009855 determination of bilateral symmetry BP 0.0845469885372262 TMO6//AT5G49990//ARF8//CVP2//AT1G33055 GO:0042254 ribosome biogenesis BP 0.0852769993255715 DIM1A//AT5G53490//AT5G52970//ATFBR1//AT5G52490//AT4G39880//AT3G11250//emb2738//CCB1//AT1G73940//PSAO//LQY1//AVDE1//PSB27 GO:0043255 regulation of carbohydrate biosynthetic ... BP 0.0879561020228555 AtMYB76//CP12 GO:0009799 specification of symmetry BP 0.0885983280005489 TMO6//AT5G49990//ARF8//CVP2//AT1G33055 GO:0046488 phosphatidylinositol metabolic process BP 0.0885983280005489 AT5G44010//MEE60//AT4G05070//CVP2//AtOZF1 GO:0010207 photosystem II assembly BP 0.0914389648636065 ATOEP80//AT5G52960//HCF243//CCB1//PSAO//LQY1//PSBR//PSB27 GO:0015979 photosynthesis BP 0.0931568109429289 ATOEP80//AT5G53490//AT5G52960//ACO1//PORB//HCF243//CCB1//PHYLLO//AT1G76550//CP12//ALB-1V//PSAO//LQY1//PSBR//PSB27 GO:0016567 protein ubiquitination BP 0.0938082684220802 AT5G12410//AT5G62800//ATFBR1//AT5G42200//AT5G37910//ATICE1//ATEPR1 GO:0022613 ribonucleoprotein complex biogenesis BP 0.0971342276337957 DIM1A//AT5G53490//AT5G52970//ATFBR1//AT5G52490//AT4G39880//AT3G11250//emb2738//CCB1//AT1G73940//PSAO//LQY1//AVDE1//PSB27 GO:0009723 response to ethylene BP 0.0990686534011993 ATTRP1//PORA//MYB77//PORB//ANAC072//ECIP1//ATMYBL2//ORA59//ATERF12 GO:0009069 serine family amino acid metabolic proce... BP 0.0995553897269845 ACYB-2//AT5G13760//TUB6//PORB//ATPME3//AT1G35420//AT1G68260//PSAO//PSBR//AVDE1 GO:0016131 brassinosteroid metabolic process BP 0.100526034589103 TUB6//AT4G29270//3BETAHSD/D1//AT2G34590 GO:0016132 brassinosteroid biosynthetic process BP 0.100526034589103 TUB6//AT4G29270//3BETAHSD/D1//AT2G34590 GO:0051235 maintenance of location BP 0.100526034589103 AT5G12410//AT5G56100//ATICE1//ATEPR1 GO:0006855 drug transmembrane transport BP 0.103791417399285 ADS1//ABCG39//AT2G34360 GO:0000003 reproduction BP 0.105113111893077 AFO//AT5G12410//ACBP5//TUB6//EMS1//AT5G05130//GIG1//AT3G50850//ARAC8//ATSBT3.18//XTH3//ATICE1//AT3G08030//AT1G03890//ATEPR1 GO:0006839 mitochondrial transport BP 0.105786122504952 AT5G26200//AT5G48970//ATMBAC1//AT1G14060//AT2G37400 GO:0016128 phytosteroid metabolic process BP 0.105868713567963 TUB6//AT4G29270//3BETAHSD/D1//AT2G34590 GO:0016129 phytosteroid biosynthetic process BP 0.105868713567963 TUB6//AT4G29270//3BETAHSD/D1//AT2G34590 GO:0031407 oxylipin metabolic process BP 0.109117932333999 ATPXG2//AVDE1 GO:0031408 oxylipin biosynthetic process BP 0.109117932333999 ATPXG2//AVDE1 GO:0015893 drug transport BP 0.110853672286123 ADS1//ABCG39//AT2G34360 GO:0042493 response to drug BP 0.110853672286123 ADS1//ABCG39//AT2G34360 GO:0090558 plant epidermis development BP 0.113063969262057 AFO//LBD18//ACYB-2//TUB6//EMS1//SHL1//CYCD5;1//AT4G25790//AT4G02370//ATRPS13A//BGAL1//CYCP2;1//ATICE1//AT1G35420//XXT5//HYP7//ABR GO:0010054 trichoblast differentiation BP 0.113091166463682 LBD18//ACYB-2//TUB6//SHL1//AT4G25790//AT4G02370//BGAL1//XXT5//HYP7//ABR GO:0009739 response to gibberellin BP 0.113977790676317 ATTRP1//AtMYB24//TUB6//ARAC8//AT3G08030//ATMYBL2 GO:0009740 gibberellic acid mediated signaling path... BP 0.116929921324297 AtMYB24//TUB6//ARAC8//AT3G08030 GO:0048589 developmental growth BP 0.116937724584763 AFO//ACYB-2//LSH1//TMO6//ABCB25//AT5G49990//TUB6//ATPTR5//GIG1//SHL1//ATROPGEF9//AT4G02370//AT3G28770//BGAL1//XXT5//ATEXP11//AT1G33055//AT2G22180//AtPERK4//ABR GO:0009845 seed germination BP 0.118065609749996 AFO//AT5G12410//PYL7//ATICE1//AtNG1//ATEPR1//AtPERK4 GO:0032446 protein modification by small protein co... BP 0.118065609749996 AT5G12410//AT5G62800//ATFBR1//AT5G42200//AT5G37910//ATICE1//ATEPR1 GO:0048767 root hair elongation BP 0.118065609749996 ACYB-2//TUB6//SHL1//AT4G02370//BGAL1//XXT5//ABR GO:0010053 root epidermal cell differentiation BP 0.121688605463395 LBD18//ACYB-2//TUB6//SHL1//AT4G25790//AT4G02370//BGAL1//XXT5//HYP7//ABR GO:0010476 gibberellin mediated signaling pathway BP 0.122642309399368 AtMYB24//TUB6//ARAC8//AT3G08030