GOID TERM ONTOLOGY pValue Genes GO:0009740 gibberellic acid mediated signaling path... BP 0.000590334419390523 DELTA-VPE//ATMYB65//ZFP5//IAA8 GO:0010476 gibberellin mediated signaling pathway BP 0.000634934661218153 DELTA-VPE//ATMYB65//ZFP5//IAA8 GO:0071370 cellular response to gibberellin stimulu... BP 0.00073122144446722 DELTA-VPE//ATMYB65//ZFP5//IAA8 GO:0051726 regulation of cell cycle BP 0.00422564508539086 AT3G51280//ATMSH6//CYCB3;1//ATEME1A//GEM1 GO:0009739 response to gibberellin BP 0.0043245842843648 DELTA-VPE//ATMYB65//ZFP5//IAA8 GO:0030048 actin filament-based movement BP 0.00832038212845722 AT4G39110//ATXIH//GLP8 GO:0009686 gibberellin biosynthetic process BP 0.0208453833397583 DELTA-VPE//ATMYB65 GO:0016102 diterpenoid biosynthetic process BP 0.0221766757582484 DELTA-VPE//ATMYB65 GO:0006275 regulation of DNA replication BP 0.0239090471060646 AT3G51280//ATMSH6//ATEME1A GO:0006928 movement of cell or subcellular componen... BP 0.0262135722928735 AT4G39110//ATXIH//GLP8 GO:0009685 gibberellin metabolic process BP 0.0278396522721868 DELTA-VPE//ATMYB65 GO:0016101 diterpenoid metabolic process BP 0.0293370341785512 DELTA-VPE//ATMYB65 GO:0006261 DNA-dependent DNA replication BP 0.0294655607814622 AT3G51280//ATMSH6//ATEME1A GO:0010162 seed dormancy process BP 0.0294655607814622 DELTA-VPE//AT3G15670//IAA8 GO:0022611 dormancy process BP 0.0294655607814622 DELTA-VPE//AT3G15670//IAA8 GO:0051567 histone H3-K9 methylation BP 0.0329215871670733 AT3G51280//AT2G42940//GEM1 GO:0061647 histone H3-K9 modification BP 0.0329215871670733 AT3G51280//AT2G42940//GEM1 GO:0048447 sepal morphogenesis BP 0.0372864942046329 ATMSH6//ATEME1A GO:0048451 petal formation BP 0.0372864942046329 ATMSH6//ATEME1A GO:0048453 sepal formation BP 0.0372864942046329 ATMSH6//ATEME1A GO:0048442 sepal development BP 0.0406722947636361 ATMSH6//ATEME1A GO:0048464 flower calyx development BP 0.0406722947636361 ATMSH6//ATEME1A GO:0006270 DNA replication initiation BP 0.0424072865038988 AT3G51280//ATMSH6 GO:0009736 cytokinin-activated signaling pathway BP 0.0441696717913303 ZFP5//IAA8 GO:0071368 cellular response to cytokinin stimulus BP 0.0441696717913303 ZFP5//IAA8 GO:0010015 root morphogenesis BP 0.0444349628709634 AT5G47980//ATSOS4//AT1G71740//IAA8//ATL9 GO:0010431 seed maturation BP 0.044497453136557 DELTA-VPE//AT3G15670//IAA8 GO:0048646 anatomical structure formation involved ... BP 0.0483439119857375 ATMSH6//ATSTP2//ATEME1A//IAA8 GO:0000003 reproduction BP 0.0487940214212258 ATMSH6//DELTA-VPE//AT3G15670//ATMYB65//IAA8//GEM1 GO:0051052 regulation of DNA metabolic process BP 0.0509502431591399 AT3G51280//ATMSH6//ATEME1A GO:0034968 histone lysine methylation BP 0.0520677966522337 AT3G51280//AT2G42940//GEM1 GO:0018022 peptidyl-lysine methylation BP 0.0531972367520476 AT3G51280//AT2G42940//GEM1 GO:0051276 chromosome organization BP 0.0533104341227367 AT3G51280//ATMSH6//ATEME1A//ATCSP3//AT2G42940//GEM1 GO:0048446 petal morphogenesis BP 0.0572326502260195 ATMSH6//ATEME1A GO:0006310 DNA recombination BP 0.0578327515754536 ATMSH6//ATEME1A//GEM1 GO:0048609 multicellular organismal reproductive pr... BP 0.0592881027001547 DELTA-VPE//AT3G15670//ATMYB65//IAA8 GO:0048645 organ formation BP 0.0602203523650834 ATMSH6//ATEME1A//IAA8 GO:0090558 plant epidermis development BP 0.0630913907668032 AT5G47980//ATSOS4//AT1G71740//CYCB3;1//ZFP5//ATL9 GO:0001666 response to hypoxia BP 0.0631943856405043 AT4G37710//AT4G33560 GO:0071396 cellular response to lipid BP 0.0638228181321282 DELTA-VPE//ATMYB65//ZFP5//IAA8 GO:0036293 response to decreased oxygen levels BP 0.0652267561409504 AT4G37710//AT4G33560 GO:0070482 response to oxygen levels BP 0.0672809617162959 AT4G37710//AT4G33560 GO:0016568 chromatin modification BP 0.0704707722596317 AT3G51280//ATEME1A//AT2G42940//GEM1 GO:0006108 malate metabolic process BP 0.0720961340069072 970_ GO:0042816 vitamin B6 metabolic process BP 0.0720961340069072 589_ GO:0042819 vitamin B6 biosynthetic process BP 0.0720961340069072 589_ GO:0048869 cellular developmental process BP 0.0741613399459536 AT5G47980//ATSOS4//SPL15//AT4G39110//ATMYB65//ATSTP2//AT1G71740//CYCB3;1//ZFP5//ATL9 GO:0010054 trichoblast differentiation BP 0.0754303727210352 AT5G47980//ATSOS4//AT1G71740//ATL9 GO:0010605 negative regulation of macromolecule met... BP 0.0770315729188725 ATMSH6//ATEME1A//AT2G42940//IAA8//GEM1 GO:0032504 multicellular organism reproduction BP 0.0774628570150665 DELTA-VPE//AT3G15670//ATMYB65//IAA8 GO:0016571 histone methylation BP 0.0781902495339471 AT3G51280//AT2G42940//GEM1 GO:0010311 lateral root formation BP 0.0790169639466347 319_ GO:0051053 negative regulation of DNA metabolic pro... BP 0.0790169639466347 562_ GO:0010053 root epidermal cell differentiation BP 0.0805631925731552 AT5G47980//ATSOS4//AT1G71740//ATL9 GO:0090627 plant epidermal cell differentiation BP 0.0837249365429255 AT5G47980//ATSOS4//AT1G71740//ATL9 GO:0006479 protein methylation BP 0.0851183013891288 AT3G51280//AT2G42940//GEM1 GO:0008213 protein alkylation BP 0.0851183013891288 AT3G51280//AT2G42940//GEM1 GO:0030029 actin filament-based process BP 0.087961156533735 AT4G39110//ATXIH//GLP8 GO:0009735 response to cytokinin BP 0.0889320427898204 ZFP5//IAA8 GO:0032270 positive regulation of cellular protein ... BP 0.0927060341905778 263_ GO:0051247 positive regulation of protein metabolic... BP 0.0927060341905778 263_ GO:0048441 petal development BP 0.095784204791041 ATMSH6//ATEME1A GO:0048465 corolla development BP 0.095784204791041 ATMSH6//ATEME1A GO:0007131 reciprocal meiotic recombination BP 0.098101292246732 ATMSH6//GEM1 GO:0035825 reciprocal DNA recombination BP 0.098101292246732 ATMSH6//GEM1 GO:0010639 negative regulation of organelle organiz... BP 0.0994750137641766 263_ GO:0051129 negative regulation of cellular componen... BP 0.0994750137641766 263_ GO:0043414 macromolecule methylation BP 0.100432041431096 AT3G51280//ATEME1A//AT2G42940//GEM1 GO:0007127 meiosis I BP 0.102782834183434 ATMSH6//GEM1 GO:0048506 regulation of timing of meristematic pha... BP 0.10619411139545 208_ GO:0048510 regulation of timing of transition from ... BP 0.10619411139545 208_ GO:0032259 methylation BP 0.106323664340381 AT3G51280//ATEME1A//AT2G42940//GEM1 GO:0006473 protein acetylation BP 0.112863690112812 263_ GO:0048364 root development BP 0.114491224505708 AT5G47980//ATSOS4//AT1G71740//IAA8//ATL9 GO:0040008 regulation of growth BP 0.115271797065546 AT4G39110//AT4G33560//ATMYB65 GO:0022622 root system development BP 0.115524702816336 AT5G47980//ATSOS4//AT1G71740//IAA8//ATL9 GO:0009892 negative regulation of metabolic process BP 0.116562717946539 ATMSH6//ATEME1A//AT2G42940//IAA8//GEM1 GO:0016444 somatic cell DNA recombination BP 0.119484110335851 926_ GO:0072525 pyridine-containing compound biosyntheti... BP 0.119484110335851 589_ GO:0031324 negative regulation of cellular metaboli... BP 0.123633789028999 ATMSH6//AT2G42940//IAA8//GEM1 GO:0048731 system development BP 0.128266668663593 AT5G47980//ATSOS4//SPL15//AT4G33560//ATMSH6//DELTA-VPE//AT3G15670//AT1G71740//ZFP5//ATEME1A//AT2G42940//IAA8//MEE11//ATL9//ATPEX10 GO:0098655 cation transmembrane transport BP 0.129544911210615 COPT3//ATCHX27 GO:0098662 inorganic cation transmembrane transport BP 0.129544911210615 COPT3//ATCHX27 GO:0018205 peptidyl-lysine modification BP 0.131672094769431 AT3G51280//AT2G42940//GEM1 GO:0010101 post-embryonic root morphogenesis BP 0.132578904044093 319_ GO:0010102 lateral root morphogenesis BP 0.132578904044093 319_ GO:0016485 protein processing BP 0.132578904044093 130_ GO:0006260 DNA replication BP 0.13335592314095 AT3G51280//ATMSH6//ATEME1A GO:0009555 pollen development BP 0.13335592314095 ATMYB65//ATSTP2//ATEME1A GO:0016570 histone modification BP 0.13335592314095 AT3G51280//AT2G42940//GEM1 GO:0098660 inorganic ion transmembrane transport BP 0.134573643887787 COPT3//ATCHX27 GO:0048856 anatomical structure development BP 0.137797283460876 AT5G47980//ATSOS4//SPL15//AT4G39110//AT4G33560//ATMSH6//DELTA-VPE//AT3G15670//ATMYB65//ATSTP2//AT1G71740//CYCB3;1//ZFP5//ATEME1A//AT2G42940//IAA8//MEE11//ATL9//ATPEX10 GO:0009631 cold acclimation BP 0.139053985490266 789_ GO:0071229 cellular response to acid chemical BP 0.141650408039467 AT4G33560//DELTA-VPE//ATMYB65//ZFP5//IAA8 GO:0009653 anatomical structure morphogenesis BP 0.143075132065835 AT5G47980//ATSOS4//SPL15//AT4G39110//AT4G33560//ATMSH6//ATSTP2//AT1G71740//ATEME1A//IAA8//ATL9 GO:0007049 cell cycle BP 0.143937957574965 AT3G51280//ATMSH6//CYCB3;1//ATEME1A//GEM1 GO:0051640 organelle localization BP 0.14476038423163 ATXIH//ATPEX10 GO:0008643 carbohydrate transport BP 0.145481324400431 072_ GO:0031400 negative regulation of protein modificat... BP 0.145481324400431 263_ GO:0007275 multicellular organismal development BP 0.145876750664456 AT5G47980//ATSOS4//SPL15//AT4G33560//ATMSH6//DELTA-VPE//AT3G15670//ATMYB65//ATSTP2//AT1G71740//CYCB3;1//ZFP5//ATEME1A//AT2G42940//IAA8//MEE11//ATL9//ATPEX10