GOID TERM ONTOLOGY pValue Genes GO:0006869 lipid transport BP 0.00346730538230715 AT1G26130//AT2S3//AT4G04670//CXIP4 GO:0019932 second-messenger-mediated signaling BP 0.00597181592921616 CBL6//AT1G58110//ATPMM GO:0009582 detection of abiotic stimulus BP 0.0107088427698937 FHY2//ATHO1 GO:0043247 telomere maintenance in response to DNA ... BP 0.0188055770963525 AT4G04670//AT1G72270 GO:0032204 regulation of telomere maintenance BP 0.0211291015863082 AT4G04670//AT1G72270 GO:0032844 regulation of homeostatic process BP 0.0211291015863082 AT4G04670//AT1G72270 GO:0010218 response to far red light BP 0.0232748775110263 LHCB2//AtFBA1//FHY2 GO:0010114 response to red light BP 0.0246253937925299 LHCB2//AtFBA1//FHY2 GO:0010876 lipid localization BP 0.026783613087987 AT1G26130//AT2S3//AT4G04670//CXIP4 GO:0009581 detection of external stimulus BP 0.0287627214892544 FHY2//ATHO1 GO:0010017 red or far-red light signaling pathway BP 0.0287627214892544 FHY2//ATHO1 GO:0071489 cellular response to red or far red ligh... BP 0.0287627214892544 FHY2//ATHO1 GO:0006766 vitamin metabolic process BP 0.0289261402750355 AtFBA1//AT2G20690//ATPMM GO:0000723 telomere maintenance BP 0.0315172630952602 AT4G04670//AT1G72270 GO:0006665 sphingolipid metabolic process BP 0.0315172630952602 AT5G42660//AtIPCS2 GO:0032200 telomere organization BP 0.0315172630952602 AT4G04670//AT1G72270 GO:0019722 calcium-mediated signaling BP 0.0343714665081165 CBL6//AT1G58110 GO:0060249 anatomical structure homeostasis BP 0.0343714665081165 AT4G04670//AT1G72270 GO:0007015 actin filament organization BP 0.0369190806679707 ARP3//EDA28//SCAB1 GO:0009825 multidimensional cell growth BP 0.0373222265895319 ATEXP21//ARP3 GO:0006891 intra-Golgi vesicle-mediated transport BP 0.0403665020993512 ATARLB1//CXIP4 GO:0010090 trichome morphogenesis BP 0.0404015236181881 ATB'//ARP3//EDA28 GO:0033043 regulation of organelle organization BP 0.0419479586724154 AT4G04670//AT1G72270//ARP3//EDA28 GO:0009637 response to blue light BP 0.0440445170173002 LHCB2//AtFBA1//FHY2 GO:0010026 trichome differentiation BP 0.0459256041570073 ATB'//ARP3//EDA28 GO:0006406 mRNA export from nucleus BP 0.0467237471824204 AT4G02400//AtTHP1 GO:0051028 mRNA transport BP 0.0467237471824204 AT4G02400//AtTHP1 GO:0030036 actin cytoskeleton organization BP 0.0478460594608603 ARP3//EDA28//SCAB1 GO:0006767 water-soluble vitamin metabolic process BP 0.0500309437021383 AT2G20690//ATPMM GO:0042364 water-soluble vitamin biosynthetic proce... BP 0.0500309437021383 AT2G20690//ATPMM GO:0043090 amino acid import BP 0.0500309437021383 AT4G35110//AT2G20760 GO:0033036 macromolecule localization BP 0.0528553721322015 AT1G26130//PSRP2//AT2S3//AT4G04670//AT4G02400//AT2G24550//AT1G05060//AT2G20760//AtTHP1//AtIPCS2//CXIP4//AT2G16900//SCAB1 GO:0006403 RNA localization BP 0.0534201073769784 AT4G02400//AtTHP1 GO:0006405 RNA export from nucleus BP 0.0534201073769784 AT4G02400//AtTHP1 GO:0010332 response to gamma radiation BP 0.0534201073769784 AT4G04670//AT1G72270 GO:0050657 nucleic acid transport BP 0.0534201073769784 AT4G02400//AtTHP1 GO:0050658 RNA transport BP 0.0534201073769784 AT4G02400//AtTHP1 GO:0051236 establishment of RNA localization BP 0.0534201073769784 AT4G02400//AtTHP1 GO:0051168 nuclear export BP 0.0568884998943617 AT4G02400//AtTHP1 GO:0071214 cellular response to abiotic stimulus BP 0.0601785396208942 LHCB2//FHY2//ATHO1 GO:0007568 aging BP 0.0623658201722799 ATB'//TET15//ATSEN1 GO:0009110 vitamin biosynthetic process BP 0.0640523041702907 AT2G20690//ATPMM GO:0006655 phosphatidylglycerol biosynthetic proces... BP 0.0677425222165697 LPAT3//AT2G45670 GO:0042138 meiotic DNA double-strand break formatio... BP 0.0677425222165697 ATDFO//AT1G72270 GO:0071478 cellular response to radiation BP 0.0677425222165697 FHY2//ATHO1 GO:0071482 cellular response to light stimulus BP 0.0677425222165697 FHY2//ATHO1 GO:0007030 Golgi organization BP 0.0691464864778213 AT2G20760//PIP2;6//ATPMM GO:0046471 phosphatidylglycerol metabolic process BP 0.0715015796855866 LPAT3//AT2G45670 GO:0010212 response to ionizing radiation BP 0.0792164197967065 AT4G04670//AT1G72270 GO:0030838 positive regulation of actin filament po... BP 0.0831674360719597 ARP3//EDA28 GO:0031334 positive regulation of protein complex a... BP 0.0831674360719597 ARP3//EDA28 GO:0032273 positive regulation of protein polymeriz... BP 0.0831674360719597 ARP3//EDA28 GO:0045010 actin nucleation BP 0.0831674360719597 ARP3//EDA28 GO:0006913 nucleocytoplasmic transport BP 0.0836566005948323 AT4G02400//AT1G05060//AtTHP1 GO:0051169 nuclear transport BP 0.0836566005948323 AT4G02400//AT1G05060//AtTHP1 GO:0044089 positive regulation of cellular componen... BP 0.087177757168481 ARP3//EDA28 GO:0006486 protein glycosylation BP 0.0887620352752162 AT1G58110//AT4G26940//AT2G18750 GO:0009101 glycoprotein biosynthetic process BP 0.0887620352752162 AT1G58110//AT4G26940//AT2G18750 GO:0043413 macromolecule glycosylation BP 0.0887620352752162 AT1G58110//AT4G26940//AT2G18750 GO:0051495 positive regulation of cytoskeleton orga... BP 0.0912451259078684 ARP3//EDA28 GO:0009628 response to abiotic stimulus BP 0.0931508205440246 AT1G58110//ATHSF3//CRLK1//ATSEN1//AT4G35110//AT2S3//AT4G04670//ATHKT1//LHCB2//AT3G05640//ADA2A//AT1G56345//AT1G72270//AtFBA1//AT1G70420//FHY2//AtTHP1//PIP2;6//CXIP4//ATPMM//ATHO1 GO:0009100 glycoprotein metabolic process BP 0.0939959189128058 AT1G58110//AT4G26940//AT2G18750 GO:0010256 endomembrane system organization BP 0.0939959189128058 AT2G20760//PIP2;6//ATPMM GO:0006816 calcium ion transport BP 0.0953673338859385 PIP2;6//CXIP4 GO:0009561 megagametogenesis BP 0.0966598823049048 ATSWI3A//AT2G02880//EDA28 GO:0043687 post-translational protein modification BP 0.0995422205914831 AT3G24490//ADA2A GO:0010073 meristem maintenance BP 0.102079519136387 AT2G45340//AT1G79420//ATHO1 GO:0070085 glycosylation BP 0.102079519136387 AT1G58110//AT4G26940//AT2G18750 GO:0006555 methionine metabolic process BP 0.103767672539534 ATB'//AT5G11720 GO:0008064 regulation of actin polymerization or de... BP 0.103767672539534 ARP3//EDA28 GO:0030832 regulation of actin filament length BP 0.103767672539534 ARP3//EDA28 GO:0030833 regulation of actin filament polymerizat... BP 0.103767672539534 ARP3//EDA28 GO:0032956 regulation of actin cytoskeleton organiz... BP 0.103767672539534 ARP3//EDA28 GO:0032970 regulation of actin filament-based proce... BP 0.103767672539534 ARP3//EDA28 GO:0090305 nucleic acid phosphodiester bond hydroly... BP 0.103767672539534 ATDFO//AT1G72270 GO:0008154 actin polymerization or depolymerization BP 0.108041622418915 ARP3//EDA28 GO:0030041 actin filament polymerization BP 0.108041622418915 ARP3//EDA28 GO:0032271 regulation of protein polymerization BP 0.112362048253855 ARP3//EDA28 GO:0043254 regulation of protein complex assembly BP 0.112362048253855 ARP3//EDA28 GO:0030029 actin filament-based process BP 0.11327232921667 ARP3//EDA28//SCAB1 GO:0045017 glycerolipid biosynthetic process BP 0.11327232921667 LPAT3//GLY1//AT2G45670 GO:0051493 regulation of cytoskeleton organization BP 0.116726972579453 ARP3//EDA28 GO:0007126 meiotic nuclear division BP 0.119037788821295 AT4G04670//ATDFO//AT1G72270 GO:0034470 ncRNA processing BP 0.119787647284759 AT4G04670//AT4G02400//LHCB2//AtFBA1 GO:0042254 ribosome biogenesis BP 0.119787647284759 AT4G02400//LHCB2//AtNug2//AtFBA1 GO:0051128 regulation of cellular component organiz... BP 0.119787647284759 AT4G04670//AT1G72270//ARP3//EDA28 GO:0001522 pseudouridine synthesis BP 0.125970987362009 636_ GO:0006338 chromatin remodeling BP 0.125970987362009 149_ GO:0006400 tRNA modification BP 0.125970987362009 288_ GO:1902582 single-organism intracellular transport BP 0.128404528876561 AT5G64970//ATARLB1//PSRP2//AT4G02400//AT2G24550//AT1G05060//AT2G20760//AtTHP1//AtIPCS2//CXIP4 GO:0022613 ribonucleoprotein complex biogenesis BP 0.128993677579708 AT4G02400//LHCB2//AtNug2//AtFBA1 GO:0009743 response to carbohydrate BP 0.133705570104527 ATSEN1//LHCB2//AtTHP1//PIP2;6 GO:0030148 sphingolipid biosynthetic process BP 0.137667874614424 101_ GO:0019684 photosynthesis, light reaction BP 0.138487843047989 PSRP2//LHCB2//AtFBA1//PIP2;6 GO:0016482 cytoplasmic transport BP 0.143478986652973 PSRP2//AT4G02400//AT1G05060//AT2G20760//AtTHP1//CXIP4 GO:0009553 embryo sac development BP 0.146255549860649 ATSWI3A//AT2G02880//EDA28 GO:0032879 regulation of localization BP 0.146255549860649 LHCB2//CXIP4//SCAB1 GO:0010075 regulation of meristem growth BP 0.148370272317112 AT2G45340//ATHO1 GO:0044087 regulation of cellular component biogene... BP 0.148370272317112 ARP3//EDA28 GO:0080167 response to karrikin BP 0.148370272317112 AT4G35110//AT1G70420