GOID TERM ONTOLOGY pValue Genes GO:0090351 seedling development BP 0.00133816970249156 AT5G58410//MGO1//ATU2AF35B//ATATG6//GAUT3//DCAF1//RPT2a//ATGID1A//RGL//ACO2//ASIL1//AHP5 GO:0019321 pentose metabolic process BP 0.00172992377248864 CKL6//TBL18//AT1G49350//AT1G17160//AT2G05320 GO:0006935 chemotaxis BP 0.00241375476777448 POD1//ATCHX21//AT1G60420 GO:0010183 pollen tube guidance BP 0.00241375476777448 POD1//ATCHX21//AT1G60420 GO:0042330 taxis BP 0.00241375476777448 POD1//ATCHX21//AT1G60420 GO:0050918 positive chemotaxis BP 0.00241375476777448 POD1//ATCHX21//AT1G60420 GO:0009845 seed germination BP 0.00318902922267002 AT5G58410//MGO1//ATU2AF35B//ATATG6//GAUT3//DCAF1//ATGID1A//RGL//ACO2//ASIL1//AHP5 GO:0022603 regulation of anatomical structure morph... BP 0.00319192178159787 YUC10//YUC//RPT2a//CIN4//AT1G60420//AT2G03430//POL//AtSPL9 GO:0010050 vegetative phase change BP 0.00430603974303101 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0006949 syncytium formation BP 0.00672421577418032 ATEXP8//AT-EXP1//ATEXP3 GO:0040011 locomotion BP 0.00672421577418032 POD1//ATCHX21//AT1G60420 GO:0071731 response to nitric oxide BP 0.00672421577418032 ATNAS1//ACO2//AT2G05830 GO:0071732 cellular response to nitric oxide BP 0.00672421577418032 ATNAS1//ACO2//AT2G05830 GO:0010162 seed dormancy process BP 0.00748666650474431 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1//AT4G01610//ATGID1A//RGL GO:0022611 dormancy process BP 0.00748666650474431 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1//AT4G01610//ATGID1A//RGL GO:0010431 seed maturation BP 0.0075708106664946 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1//AT4G01610//ATGID1A//RGL//ASIL1 GO:1902170 cellular response to reactive nitrogen s... BP 0.00822892229554551 ATNAS1//ACO2//AT2G05830 GO:0009828 plant-type cell wall loosening BP 0.00991573077507932 ATEXP8//AT-EXP1//ATEXP3 GO:0009826 unidimensional cell growth BP 0.0100658395751671 ATCRM1//AT5G26720//IRE//ATMYB120//ATNAS1//ATCBL10//RPT2a//QRT3//ATEXP8//AT-EXP1//CIN4//HSL1//AT1G60420//ATPIN7//AT2G03430//ATEXP3 GO:0009856 pollination BP 0.010490387085348 ATCRM1//AT5G26720//IRE//ATMYB120//ATNAS1//ATATG6//AT4G27300//QRT3//POD1//ATCHX21//AT2G24620//AT1G60420 GO:0044706 multi-multicellular organism process BP 0.010490387085348 ATCRM1//AT5G26720//IRE//ATMYB120//ATNAS1//ATATG6//AT4G27300//QRT3//POD1//ATCHX21//AT2G24620//AT1G60420 GO:0005996 monosaccharide metabolic process BP 0.0116804246029505 ATCRM1//UVR8//AT5G56350//AT5G45620//AT5G13980//ATCYP1//RPT2a//CKL6//TBL18//AT1G52360//AT1G49350//AT1G17160//AT2G05320 GO:0000097 sulfur amino acid biosynthetic process BP 0.0120627114797399 AT5G23550//AT5G13980//ROC1//CYP83A1//AT3G30300//ATSOT18//ACO2//FDM5//AT2G05830//emb1345//ATCOQ3 GO:0009616 virus induced gene silencing BP 0.0122191194556625 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0051235 maintenance of location BP 0.0122191194556625 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1//POD1 GO:0052018 modulation by symbiont of RNA levels in ... BP 0.0122191194556625 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0052249 modulation of RNA levels in other organi... BP 0.0122191194556625 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0044723 single-organism carbohydrate metabolic p... BP 0.0123966031329052 ATCRM1//MEX1//XGD1//UVR8//AALP//AT5G58410//AT5G56350//AT5G45620//AT5G13980//TRA2//AT5G10190//ATPHS2//GAUT3//CBNAC//ATCYP1//ATCBL10//RPT2a//CKL6//TBL18//AT4G21060//CYP83A1//STT3B//AtENGase85B//AT3G27240//GAUT8//ATGID1A//AT1G52360//RGL//ACO2//HSL1//I9H//AT1G49350//AT1G17160//AT2G05320//ATPIN7//AT2G18750//AT2G05830 GO:0009625 response to insect BP 0.0126743855881336 MGO1//LCR77//CYP83A1//NRB4 GO:0035821 modification of morphology or physiology... BP 0.0130884677116794 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0044003 modification by symbiont of host morphol... BP 0.0130884677116794 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0051817 modification of morphology or physiology... BP 0.0130884677116794 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0098586 cellular response to virus BP 0.0140002445413796 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0010033 response to organic substance BP 0.0140691222460169 ERS//RHF2A//AT5G66260//IAA9//ATHB-5//AALP//AT5G58410//MGO1//AT5G45620//LCR77//ATU2AF35B//AT5G10190//ATNAS1//AtMYB109//AT3G53250//ATSAUR15//ROC1//GAUT3//DCAF1//NINJA//RPT2a//CKL6//AT4G22530//AT4G00880//DGD2//AT1G56220//AT-EXP1//CIN4//AT3G27240//ASPG1//AT3G02890//ATDCL2//AHB2//ATGID1A//NRB4//AT1G52310//RGL//AT2G41820//ACO2//NRT1.5//ATRDRP1//ASIL1//DSPTP1E//AT2G36210//AT2G25070//AHP5//ATPIN7//AT2G25420//AT2G03430//AT2G05830//AT2G14900//ATEXP3 GO:0009933 meristem structural organization BP 0.0155961103514051 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1//RPT2a//ATDCL2//AT1G52310//AT2G25420//POL GO:0048831 regulation of shoot system development BP 0.0156625560697043 AT5G58410//MGO1//ATU2AF35B//GAUT3//YUC//DCAF1//ATPRMT11//ATIMPALPHA3//ASIL1//AHP5//POL//AtSPL9 GO:0006470 protein dephosphorylation BP 0.0175101577707806 AT5G02760//PPH1//AT3G17090//AT3G09100//ATRDRP1//DSPTP1E//AT2G25070//AHP5 GO:0050826 response to freezing BP 0.0175308085122508 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1 GO:0048532 anatomical structure arrangement BP 0.017572260081397 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1//RPT2a//ATDCL2//AT1G52310//AT2G25420//POL GO:0046496 nicotinamide nucleotide metabolic proces... BP 0.018243835797858 MEX1//PGL2//PTAC16//CYP83A1//AT1G55090//AT3G27240//AT2G30050 GO:0006733 oxidoreduction coenzyme metabolic proces... BP 0.0183558303226088 MEX1//PGL2//PTAC16//CYP83A1//AT1G55090//AT3G27240//ATCOQ3//AT2G30050 GO:0042732 D-xylose metabolic process BP 0.0185524714773289 CKL6//TBL18//AT2G05320 GO:0000902 cell morphogenesis BP 0.0187503682900894 ATCRM1//AT5G26720//IRE//ATMYB120//VPS26A//ATNAS1//AtMYB109//ATCBL10//RPT2a//QRT3//AT4G01610//ATEXP8//AT-EXP1//CIN4//HSL1//AT1G60420//ATPIN7//AT2G03430//POL//ATEXP3 GO:0051701 interaction with host BP 0.019228692256432 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0009966 regulation of signal transduction BP 0.0202502552715258 ERS//ATHB-5//AT4G40050//ATGID1A//RGL//DSPTP1E//AHP5 GO:0019362 pyridine nucleotide metabolic process BP 0.0202502552715258 MEX1//PGL2//PTAC16//CYP83A1//AT1G55090//AT3G27240//AT2G30050 GO:0032989 cellular component morphogenesis BP 0.0202808685668872 ATCRM1//AT5G26720//IRE//ATMYB120//VPS26A//ATNAS1//AtMYB109//ATCBL10//RPT2a//QRT3//AT4G01610//ATEXP8//AT-EXP1//CIN4//HSL1//I9H//AT1G60420//ATPIN7//AT2G03430//POL//ATEXP3 GO:0019915 lipid storage BP 0.0202963547303935 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1 GO:0023051 regulation of signaling BP 0.0213090641004874 ERS//ATHB-5//AT4G40050//ATGID1A//RGL//DSPTP1E//AHP5 GO:0032504 multicellular organism reproduction BP 0.0223104162136854 ATCRM1//AT5G58410//MGO1//ATU2AF35B//DAU2//GAUT3//DCAF1//RPT2a//AT4G01610//ATGID1A//RGL//ASIL1//AT2G03430 GO:0010646 regulation of cell communication BP 0.0224057482077513 ERS//ATHB-5//AT4G40050//ATGID1A//RGL//DSPTP1E//AHP5 GO:0000096 sulfur amino acid metabolic process BP 0.0225289972934674 AT5G23550//AT5G13980//ROC1//CYP83A1//AT3G30300//ATSOT18//ACO2//FDM5//AT2G05830//emb1345//ATCOQ3 GO:0008380 RNA splicing BP 0.0225289972934674 AT5G46920//AT5G23550//AT1G12650//AT3G30300//ATDCL2//FDM5//STIPL1//APO1//AT2G05830//emb1345//ATCOQ3 GO:0071310 cellular response to organic substance BP 0.0228891704819303 ERS//RHF2A//IAA9//ATHB-5//AT5G58410//MGO1//ATU2AF35B//ATNAS1//AtMYB109//ROC1//GAUT3//DCAF1//NINJA//AT4G22530//DGD2//AT3G02890//ATDCL2//ATGID1A//AT1G52310//RGL//ACO2//NRT1.5//ATRDRP1//AHP5//AT2G25420//AT2G05830 GO:0009086 methionine biosynthetic process BP 0.0229332888983614 AT5G23550//AT3G30300//FDM5//AT2G05830//emb1345//ATCOQ3 GO:0071281 cellular response to iron ion BP 0.0240315921766085 ATNAS1//ACO2//AT2G05830 GO:0009725 response to hormone BP 0.0251654812395736 ERS//RHF2A//AT5G66260//IAA9//ATHB-5//AALP//LCR77//ATNAS1//AtMYB109//AT3G53250//ATSAUR15//ROC1//NINJA//AT4G00880//DGD2//AT1G56220//AT-EXP1//ASPG1//AHB2//ATGID1A//RGL//AT2G41820//ACO2//NRT1.5//ATRDRP1//ASIL1//DSPTP1E//AT2G36210//AT2G25070//AHP5//AT2G05830//AT2G14900//ATEXP3 GO:0042221 response to chemical BP 0.0252014888840468 ERS//AT4G17585//RHF2A//AT5G66260//IAA9//ATHB-5//AALP//AT5G58410//MGO1//AT5G45620//LCR77//ATU2AF35B//AT5G40645//TRA2//AT5G10190//ATNAS1//AtMYB109//AT3G53250//ATPHS2//ATSAUR15//ROC1//GAUT3//ATCYP1//DCAF1//NINJA//RPT2a//CKL6//AT4G22530//AT-NLM1//AT4G00880//DGD2//AT1G55090//AT1G56220//AT-EXP1//CIN4//AT3G15290//AT3G27240//ASPG1//AT3G02890//ATDCL2//AHB2//ATGID1A//NRB4//AT1G52310//POD1//RGL//AT2G41820//ACO2//NRT1.5//GLYI7//ATRDRP1//ASIL1//ATCHX21//DSPTP1E//AT2G36210//ATATG18H//AT1G60420//AT2G25070//AHP5//ATPIN7//AT2G25420//AT2G03430//AT2G05830//AT2G14900//ATEXP3//FBH4 GO:0006555 methionine metabolic process BP 0.0256530044301147 AT5G23550//AT3G30300//FDM5//AT2G05830//emb1345//ATCOQ3 GO:0072524 pyridine-containing compound metabolic p... BP 0.0259288542843834 MEX1//PGL2//PTAC16//CYP83A1//AT1G55090//AT3G27240//AT2G30050 GO:0006096 glycolytic process BP 0.026200871741947 AALP//AT5G56350//AT5G45620//TRA2//ATCYP1//RPT2a//AT3G27240//ACO2 GO:0009825 multidimensional cell growth BP 0.0266483635369686 ATCBL10//ATEXP8//HSL1//ATPIN7//ATEXP3 GO:0000003 reproduction BP 0.0268302144949416 ATCRM1//AT5G58410//MGO1//ATU2AF35B//DAU2//AML4//AGL16//GAUT3//DCAF1//RPT2a//QRT3//AT4G01610//ATIPT6//ATGID1A//RGL//AT1G79890//ASIL1//AT2G03430 GO:0009719 response to endogenous stimulus BP 0.0280931859411368 ERS//RHF2A//AT5G66260//IAA9//ATHB-5//AALP//LCR77//ATNAS1//AtMYB109//AT3G53250//ATSAUR15//ROC1//NINJA//AT4G22530//AT4G00880//DGD2//AT1G56220//AT-EXP1//ASPG1//AHB2//ATGID1A//RGL//AT2G41820//ACO2//NRT1.5//ATRDRP1//ASIL1//DSPTP1E//AT2G36210//AT2G25070//AHP5//AT2G05830//AT2G14900//ATEXP3 GO:0048609 multicellular organismal reproductive pr... BP 0.0297204489062806 ATCRM1//AT5G58410//MGO1//ATU2AF35B//DAU2//GAUT3//DCAF1//RPT2a//AT4G01610//ATGID1A//RGL//ASIL1 GO:0009723 response to ethylene BP 0.0298149398016062 ERS//AALP//LCR77//ATNAS1//AtMYB109//ATGID1A//RGL//ACO2//AT2G05830 GO:0071248 cellular response to metal ion BP 0.0302896679209029 ATNAS1//ACO2//AT2G05830 GO:2000024 regulation of leaf development BP 0.0316902624395619 YUC//AtSPL9 GO:0016311 dephosphorylation BP 0.0321468351988458 AT5G02760//PPH1//AT3G17090//AT3G09100//ATRDRP1//DSPTP1E//AT2G25070//AHP5 GO:0044403 symbiosis, encompassing mutualism throug... BP 0.0333679525977326 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0005975 carbohydrate metabolic process BP 0.0349830850243049 AT5G20940//ATCRM1//MEX1//XGD1//UVR8//AALP//AT5G58410//AT5G56350//AT5G45620//AT5G13980//TRA2//AT5G10190//PGL2//ATPHS2//GAUT3//CBNAC//ATCYP1//ATCBL10//RPT2a//CKL6//TBL18//AT4G21060//CYP83A1//STT3B//AtENGase85B//AT3G27240//AT3G21960//GAUT8//ATGID1A//AT1G52360//RGL//ACO2//HSL1//GLYI7//I9H//AT1G49350//AT1G17160//AT2G05320//ATPIN7//AT2G18750//AT2G05830//AT2G25800 GO:0009067 aspartate family amino acid biosynthetic... BP 0.0350727798953503 AT5G23550//AT3G30300//FDM5//AT2G05830//emb1345//ATCOQ3 GO:0044419 interspecies interaction between organis... BP 0.0350727798953503 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//AT2G25420 GO:0070887 cellular response to chemical stimulus BP 0.0358430151045953 ERS//RHF2A//IAA9//ATHB-5//AT5G58410//MGO1//ATU2AF35B//ATNAS1//AtMYB109//ROC1//GAUT3//DCAF1//NINJA//AT4G22530//DGD2//AT3G02890//ATDCL2//ATGID1A//AT1G52310//RGL//ACO2//NRT1.5//ATRDRP1//ATATG18H//AHP5//AT2G25420//AT2G05830 GO:0048523 negative regulation of cellular process BP 0.0363514481220814 ERS//ATOFP13//MGO1//AT4G40050//GAUT3//CBNAC//NINJA//RPT2a//ATIMPALPHA3//DGD2//AT3G02890//ATDCL2//AT1G52310//RGL//ATHAP2C//DSPTP1E//AHP5//AT2G25420//POL GO:0006098 pentose-phosphate shunt BP 0.0368327943739591 MEX1//PGL2//PTAC16//CYP83A1//AT3G27240//AT2G30050 GO:0051156 glucose 6-phosphate metabolic process BP 0.0368327943739591 MEX1//PGL2//PTAC16//CYP83A1//AT3G27240//AT2G30050 GO:0034614 cellular response to reactive oxygen spe... BP 0.0373196332402533 ATNAS1//ACO2//AT2G05830 GO:0046685 response to arsenic-containing substance BP 0.0373196332402533 AT-NLM1//AT3G15290//FBH4 GO:0071241 cellular response to inorganic substance BP 0.0373196332402533 ATNAS1//ACO2//AT2G05830 GO:0016049 cell growth BP 0.0378434280449038 ATCRM1//AT5G26720//IRE//ATMYB120//VPS26A//ATNAS1//ATCBL10//RPT2a//QRT3//AT4G01610//ATEXP8//AT-EXP1//CIN4//HSL1//AT1G60420//ATPIN7//AT2G03430//AT2G25800//ATEXP3 GO:0048868 pollen tube development BP 0.0382104547703529 ATCRM1//AT5G26720//IRE//ATMYB120//ATNAS1//QRT3//POD1//ATCHX21//AT1G60420 GO:0009756 carbohydrate mediated signaling BP 0.0383361164767456 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1 GO:0010182 sugar mediated signaling pathway BP 0.0383361164767456 AT5G58410//MGO1//ATU2AF35B//GAUT3//DCAF1 GO:0006739 NADP metabolic process BP 0.0405201978691332 MEX1//PGL2//PTAC16//CYP83A1//AT3G27240//AT2G30050 GO:0044272 sulfur compound biosynthetic process BP 0.0419806740322313 MEX1//AT5G23550//AT5G13980//PTAC16//ROC1//CYP83A1//AT3G30300//ATSOT18//ACO2//FDM5//AT2G05830//emb1345//ATCOQ3 GO:1901699 cellular response to nitrogen compound BP 0.0420346420591871 ATNAS1//AT3G02890//ATDCL2//AT1G52310//ACO2//AT2G25420//AT2G05830 GO:0009968 negative regulation of signal transducti... BP 0.0421867358755829 ERS//AT4G40050//RGL//DSPTP1E GO:0010648 negative regulation of cell communicatio... BP 0.0421867358755829 ERS//AT4G40050//RGL//DSPTP1E GO:0023057 negative regulation of signaling BP 0.0421867358755829 ERS//AT4G40050//RGL//DSPTP1E GO:0009640 photomorphogenesis BP 0.0434716757367373 RANGAP2//AT5G58410//MGO1//ATU2AF35B//ROC1//GAUT3//DCAF1//CIN4 GO:0009831 plant-type cell wall modification involv... BP 0.0447645771226228 ATEXP8//ATEXP3 GO:0009937 regulation of gibberellic acid mediated ... BP 0.0447645771226228 ATGID1A//RGL GO:0042547 cell wall modification involved in multi... BP 0.0447645771226228 ATEXP8//ATEXP3 GO:0048580 regulation of post-embryonic development BP 0.0452379219074865 AT5G58410//MGO1//ATU2AF35B//GAUT3//YUC//DCAF1//ATPRMT11//ATIMPALPHA3//CIN4//ACO2//ASIL1//AHP5//POL GO:0060560 developmental growth involved in morphog... BP 0.0457831747499624 ATCRM1//AT5G26720//IRE//ATMYB120//ATNAS1//ATCBL10//RPT2a//QRT3//ATEXP8//AT-EXP1//CIN4//HSL1//AT1G60420//ATPIN7//AT2G03430//ATEXP3 GO:0009932 cell tip growth BP 0.0471042692877714 ATCRM1//AT5G26720//IRE//ATMYB120//ATNAS1//ATCBL10//QRT3//HSL1//AT1G60420//ATPIN7 GO:0043094 cellular metabolic compound salvage BP 0.0485751875897251 AT5G45620//RPT2a//AT3G15290//AT3G27240//SDH6//AT2G05830 GO:0009615 response to virus BP 0.0492090524840145 IAA9//AT3G02890//ATDCL2//AT1G52310//FDM5//ATRDRP1//AT2G25420 GO:0016053 organic acid biosynthetic process BP 0.0504671951358242 RHF2A//AAO2//AT5G62200//MGO1//AT5G23550//AT5G13980//TRA2//ATNAS1//ROC1//CYP83A1//DGD2//PDH-E1//AT3G30300//NRB4//ATSOT18//ACO2//FDM5//ATKAO1//AT2G05830//emb1345//ATCOQ3//ATPEX16