GOID TERM ONTOLOGY pValue Genes GO:0007000 nucleolus organization BP 0.0131081452151892 ACR4//DRP5A GO:0010311 lateral root formation BP 0.0131081452151892 LBD18//ACR4 GO:0019915 lipid storage BP 0.0157473858459547 AT5G56100//ACR4//AT2S3 GO:0051235 maintenance of location BP 0.0202011338549939 AT5G56100//ACR4//AT2S3 GO:0009685 gibberellin metabolic process BP 0.0253839063962652 AGL15//ERL2 GO:0009845 seed germination BP 0.0257121242949979 AFO//ERL2//ACR4//AT2S3 GO:0006813 potassium ion transport BP 0.0274076890901497 ATKEA6//ATKCO6 GO:0016101 diterpenoid metabolic process BP 0.0274076890901497 AGL15//ERL2 GO:0009556 microsporogenesis BP 0.0294943388610915 ATGSL09//AGL15 GO:0052543 callose deposition in cell wall BP 0.0294943388610915 ATGSL09//AGL15 GO:0090351 seedling development BP 0.0305645252503132 AFO//ERL2//ACR4//AT2S3 GO:0010101 post-embryonic root morphogenesis BP 0.0316423636240983 LBD18//ACR4 GO:0010102 lateral root morphogenesis BP 0.0316423636240983 LBD18//ACR4 GO:0048236 plant-type spore development BP 0.0316423636240983 ATGSL09//AGL15 GO:0052386 cell wall thickening BP 0.0316423636240983 ATGSL09//AGL15 GO:0006261 DNA-dependent DNA replication BP 0.0322944082266457 POLH//AT1G33420//CDC27a//DRP5A GO:0090626 plant epidermis morphogenesis BP 0.0359227784543628 AFO//LBD18//ATMYB23//ERL2//RPH1 GO:0035670 plant-type ovary development BP 0.0400033001562315 AFO//AGL15//ERL2 GO:0048481 ovule development BP 0.0400033001562315 AFO//AGL15//ERL2 GO:0051302 regulation of cell division BP 0.0457387620636459 ACR4//CDC27a GO:0001708 cell fate specification BP 0.0508646484817151 AFO//ATMYB23 GO:0009555 pollen development BP 0.0527247075063155 KPL//ATGSL09//AGL15//AT3G28780 GO:0010089 xylem development BP 0.056186435822847 LBD18//TBL36 GO:0009909 regulation of flower development BP 0.0627564501602457 AFO//AGL15//ERL2//ACR4//DRP5A GO:0010431 seed maturation BP 0.0632701082865327 AFO//AGL15//ACR4 GO:0045165 cell fate commitment BP 0.064514471035197 AFO//ATMYB23 GO:0006997 nucleus organization BP 0.0673777195947228 ACR4//DRP5A GO:0009798 axis specification BP 0.0673777195947228 AFO//ATPIN7 GO:0010103 stomatal complex morphogenesis BP 0.0703347341426072 AFO//ERL2//RPH1 GO:0048831 regulation of shoot system development BP 0.0748319033408758 AFO//AGL15//ERL2//ACR4//DRP5A GO:0048229 gametophyte development BP 0.0783317662403541 KPL//ATGSL09//AGL15//ERL2//AT3G28780 GO:0008152 metabolic process BP 0.0828127583300881 AFO//LBD18//BEN1//AT5G10700//AT4G36430//AT5G14720//AT5G66080//AT5G63700//AT5G63380//ACT4//AT5G54170//AT5G47000//POLH//scpl41//ATMYB23//ATGSL09//AT5G18750//AT5G17670//AGL15//AT5G10160//ERL2//GUN4//ACR4//AT3G55920//AT3G55410//TBL36//ATOFP18//AT3G45940//AT3G42950//CRK26//AT4G20210//AT4G19380//AtMYB55//LAG13//AT1G33420//AT1G56310//CYP72A11//MPK9//ACLB-1//AT3G11460//CDC27a//AT1G67890//AT1G14650//DRP5A//AT1G79950//AT1G14240//AT2G17530//AT2G21830//AT2G22530//BGLU45//AT1G09060//AT1G03590//ARL1//ATPIN7//MED33B//RPH1//AT2G24230//AT2G43180//AT2G45500 GO:2000241 regulation of reproductive process BP 0.0843593402963601 AFO//AGL15//ERL2//ACR4//DRP5A GO:0010087 phloem or xylem histogenesis BP 0.0885235708197462 LBD18//TBL36 GO:0050826 response to freezing BP 0.0948870888175822 ACR4//AT2S3 GO:0048646 anatomical structure formation involved ... BP 0.095438992826026 AFO//LBD18//ACR4//AT3G28780 GO:0000003 reproduction BP 0.0968850359859814 AFO//KPL//ATGSL09//AGL15//ACR4//CDC27a GO:0071555 cell wall organization BP 0.0980355118624752 LBD18//ATGSL09//AGL15//AT3G28780//AT1G23200//ATPIN7 GO:0007267 cell-cell signaling BP 0.0981172807756079 ATMYB23//AT1G79950 GO:0009900 dehiscence BP 0.0991962163645104 258_ GO:0035384 thioester biosynthetic process BP 0.0991962163645104 515_ GO:0071616 acyl-CoA biosynthetic process BP 0.0991962163645104 515_ GO:0071554 cell wall organization or biogenesis BP 0.10123363095525 LBD18//ATGSL09//AGL15//TBL36//AT3G28780//AT1G14240//AT1G23200//ATPIN7 GO:0048609 multicellular organismal reproductive pr... BP 0.105164717988452 AFO//AGL15//ACR4//CDC27a GO:0048440 carpel development BP 0.106163237244152 AFO//AGL15//ERL2 GO:0042545 cell wall modification BP 0.108504610600857 ATGSL09//AGL15//AT3G28780//AT1G23200 GO:0009060 aerobic respiration BP 0.108563886598348 787_ GO:0071470 cellular response to osmotic stress BP 0.108563886598348 341_ GO:0006743 ubiquinone metabolic process BP 0.117835248447236 470_ GO:0006744 ubiquinone biosynthetic process BP 0.117835248447236 470_ GO:0045229 external encapsulating structure organiz... BP 0.118705813639941 LBD18//ATGSL09//AGL15//AT3G28780//AT1G23200//ATPIN7 GO:0048467 gynoecium development BP 0.119433624933177 AFO//AGL15//ERL2 GO:0007389 pattern specification process BP 0.125908578295295 AFO//ATMYB23//AT1G79950//ATPIN7 GO:0010092 specification of organ identity BP 0.127011280654922 138_ GO:0010093 specification of floral organ identity BP 0.127011280654922 138_ GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 0.127011280654922 340_ GO:0032875 regulation of DNA endoreduplication BP 0.127011280654922 376_ GO:0032958 inositol phosphate biosynthetic process BP 0.127011280654922 340_ GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 0.127011280654922 340_ GO:0006457 protein folding BP 0.128607903012206 AT5G18750//AT3G55920//ARL1 GO:0032504 multicellular organism reproduction BP 0.129525260257578 AFO//AGL15//ACR4//CDC27a GO:0010876 lipid localization BP 0.130940293204365 AT5G56100//ACR4//AT2S3 GO:0048580 regulation of post-embryonic development BP 0.131520619788738 AFO//AGL15//ERL2//ACR4//DRP5A GO:0090558 plant epidermis development BP 0.134522277630348 AFO//LBD18//ATMYB23//ERL2//ATPIN7//RPH1 GO:0010229 inflorescence development BP 0.136092952134418 138_ GO:0090329 regulation of DNA-dependent DNA replicat... BP 0.136092952134418 376_ GO:0048869 cellular developmental process BP 0.137376449236805 AFO//LBD18//ATMYB23//ATGSL09//AGL15//GUN4//AT3G28780//CDC27a//ATPIN7//NDL3 GO:0009108 coenzyme biosynthetic process BP 0.142589240276318 AT5G10160//ACLB-1 GO:0009809 lignin biosynthetic process BP 0.145081222065572 433_ GO:0019216 regulation of lipid metabolic process BP 0.145081222065572 141_ GO:0048527 lateral root development BP 0.146170129209073 LBD18//ACR4 GO:0048645 organ formation BP 0.147675959982776 AFO//LBD18//ACR4 GO:0010374 stomatal complex development BP 0.152582078859402 AFO//ERL2//RPH1 GO:0006897 endocytosis BP 0.153977039991692 002_ GO:0042732 D-xylose metabolic process BP 0.153977039991692 028_ GO:0046519 sphingoid metabolic process BP 0.153977039991692 157_ GO:0046520 sphingoid biosynthetic process BP 0.153977039991692 157_ GO:0006721 terpenoid metabolic process BP 0.157540137032799 AGL15//ERL2//GUN4 GO:0033037 polysaccharide localization BP 0.160673684418627 ATGSL09//AGL15 GO:0052545 callose localization BP 0.160673684418627 ATGSL09//AGL15 GO:0009933 meristem structural organization BP 0.165070571940768 AFO//ACR4//AT1G79950 GO:0044255 cellular lipid metabolic process BP 0.167411744921579 AT5G17670//AGL15//AT5G10160//ERL2//GUN4//LAG13//AT2G22530//AT2G45500 GO:0009739 response to gibberellin BP 0.168023110479627 ATTRP1//ERL2 GO:0048528 post-embryonic root development BP 0.168023110479627 LBD18//ACR4 GO:0046165 alcohol biosynthetic process BP 0.170150410267262 BEN1//AT5G63700//LAG13 GO:0051188 cofactor biosynthetic process BP 0.170150410267262 AT5G10160//GUN4//ACLB-1 GO:0009886 post-embryonic morphogenesis BP 0.170683135839466 AFO//LBD18//ERL2//ACR4//RPH1 GO:0008356 asymmetric cell division BP 0.171495070392479 521_ GO:0010227 floral organ abscission BP 0.171495070392479 258_ GO:0010351 lithium ion transport BP 0.171495070392479 329_ GO:0048532 anatomical structure arrangement BP 0.172707506548139 AFO//ACR4//AT1G79950 GO:0010162 seed dormancy process BP 0.175430061489225 AFO//ACR4 GO:0010498 proteasomal protein catabolic process BP 0.175430061489225 ACT4//CDC27a GO:0022611 dormancy process BP 0.175430061489225 AFO//ACR4 GO:0006260 DNA replication BP 0.176094571452264 POLH//AT1G33420//CDC27a//DRP5A GO:0009888 tissue development BP 0.177351205981346 AFO//LBD18//ATMYB23//ERL2//ACR4//TBL36//AT1G79950//ATPIN7//RPH1 GO:0006643 membrane lipid metabolic process BP 0.179153404874597 AT5G17670//LAG13 GO:0009698 phenylpropanoid metabolic process BP 0.179153404874597 BGLU45//MED33B GO:0006814 sodium ion transport BP 0.180119134627446 329_ GO:0009910 negative regulation of flower developmen... BP 0.180119134627446 258_