GOID TERM ONTOLOGY pValue Genes GO:0016114 terpenoid biosynthetic process BP 0.0171279051363792 ACT1//AT1G57770//AT3G59580//ATGA3OX2//CRB GO:0090351 seedling development BP 0.0213224131496573 ATGID1C//SNX2a//ATGA3OX2//CRB GO:0006721 terpenoid metabolic process BP 0.0230900647146343 ACT1//AT1G57770//AT3G59580//ATGA3OX2//CRB GO:0009686 gibberellin biosynthetic process BP 0.0272499022094196 ATGA3OX2//CRB GO:0016102 diterpenoid biosynthetic process BP 0.0288582092053527 ATGA3OX2//CRB GO:0010162 seed dormancy process BP 0.0311492148166627 ATGID1C//ATGA3OX2//CRB GO:0022611 dormancy process BP 0.0311492148166627 ATGID1C//ATGA3OX2//CRB GO:0009685 gibberellin metabolic process BP 0.0339032343492169 ATGA3OX2//CRB GO:0048316 seed development BP 0.0360525385519417 ATGID1C//HEMG2//SSR16//AT3G29185//ATGA3OX2//EMB173//CRB GO:0016101 diterpenoid metabolic process BP 0.037443217374356 ATGA3OX2//CRB GO:0010154 fruit development BP 0.0414409286014455 ATGID1C//HEMG2//SSR16//AT3G29185//ATGA3OX2//EMB173//CRB GO:0010431 seed maturation BP 0.0456810616240881 ATGID1C//ATGA3OX2//CRB GO:0008299 isoprenoid biosynthetic process BP 0.0489951806136419 ACT1//AT1G57770//AT3G59580//AT3G29185//ATGA3OX2//CRB GO:0006655 phosphatidylglycerol biosynthetic proces... BP 0.0570689367390396 ACT1//AT3G29185 GO:0030048 actin filament-based movement BP 0.0570689367390396 AT1G16760//PRK4 GO:2000241 regulation of reproductive process BP 0.0574104180567103 PRK4//ATGA3OX2//EMB173//CRB GO:0006720 isoprenoid metabolic process BP 0.0584370337254678 ACT1//AT1G57770//AT3G59580//AT3G29185//ATGA3OX2//CRB GO:0046471 phosphatidylglycerol metabolic process BP 0.0591933979570407 ACT1//AT3G29185 GO:0032268 regulation of cellular protein metabolic... BP 0.0746872844359595 YAB5//PSAD-1//CYCP2;1//ATSRP3 GO:0009851 auxin biosynthetic process BP 0.077117628388047 HEMG2//CYP76C7 GO:0050826 response to freezing BP 0.077117628388047 ATGA3OX2//CRB GO:0010769 regulation of cell morphogenesis involve... BP 0.0777643350392123 119_ GO:0051346 negative regulation of hydrolase activit... BP 0.0777643350392123 332_ GO:0060284 regulation of cell development BP 0.0777643350392123 119_ GO:0051246 regulation of protein metabolic process BP 0.0813503931679438 YAB5//PSAD-1//CYCP2;1//ATSRP3 GO:0009845 seed germination BP 0.0814118980464695 ATGID1C//ATGA3OX2//CRB GO:0010955 negative regulation of protein processin... BP 0.0852036547409517 332_ GO:0045861 negative regulation of proteolysis BP 0.0852036547409517 332_ GO:0070613 regulation of protein processing BP 0.0852036547409517 332_ GO:0019915 lipid storage BP 0.0866432236935241 ATGA3OX2//CRB GO:0042254 ribosome biogenesis BP 0.0882996106169733 AT3G47070//SSR16//PSAD-1//AT1G60230 GO:0009657 plastid organization BP 0.0906416146028134 YAB5//AT3G47070//SSR16//PSAD-1//AT3G29185 GO:0006270 DNA replication initiation BP 0.0925836044381319 562_ GO:0022613 ribonucleoprotein complex biogenesis BP 0.0943044432217057 AT3G47070//SSR16//PSAD-1//AT1G60230 GO:0048367 shoot system development BP 0.095348362039262 YAB5//ATGID1C//HEMG2//SSR16//ATMSH6//ATATG2//AT3G29185//ATGA3OX2//CRB GO:0006928 movement of cell or subcellular componen... BP 0.099014221680402 AT1G16760//PRK4 GO:0009756 carbohydrate mediated signaling BP 0.099014221680402 ATGA3OX2//CRB GO:0009850 auxin metabolic process BP 0.099014221680402 HEMG2//CYP76C7 GO:0010182 sugar mediated signaling pathway BP 0.099014221680402 ATGA3OX2//CRB GO:0009960 endosperm development BP 0.0999046528277614 908_ GO:0030162 regulation of proteolysis BP 0.0999046528277614 332_ GO:0046352 disaccharide catabolic process BP 0.0999046528277614 386_ GO:0080050 regulation of seed development BP 0.0999046528277614 908_ GO:0009886 post-embryonic morphogenesis BP 0.105588821592268 ATGID1C//ATMSH6//AT3G29185//EMB173 GO:0009793 embryo development ending in seed dorman... BP 0.106121738441655 HEMG2//SSR16//AT3G29185//ATGA3OX2//CRB GO:0009313 oligosaccharide catabolic process BP 0.107167264947058 386_ GO:0018871 1-aminocyclopropane-1-carboxylate metabo... BP 0.107167264947058 795_ GO:0042218 1-aminocyclopropane-1-carboxylate biosyn... BP 0.107167264947058 795_ GO:0010114 response to red light BP 0.109245524849306 AT3G47070//ATGA3OX2 GO:0009311 oligosaccharide metabolic process BP 0.115376139288521 BGAL16//ATGID1C//AT3G29185 GO:0071322 cellular response to carbohydrate stimul... BP 0.117095386532377 ATGA3OX2//CRB GO:0016226 iron-sulfur cluster assembly BP 0.119743325079125 SSR16//AT3G29185 GO:0031163 metallo-sulfur cluster assembly BP 0.119743325079125 SSR16//AT3G29185 GO:0051235 maintenance of location BP 0.125083699894186 ATGA3OX2//CRB GO:0009668 plastid membrane organization BP 0.131334831619672 AT3G47070//SSR16//AT3G29185 GO:0010027 thylakoid membrane organization BP 0.131334831619672 AT3G47070//SSR16//AT3G29185 GO:0090567 reproductive shoot system development BP 0.13321869176566 ATGID1C//HEMG2//SSR16//ATMSH6//ATGA3OX2//CRB GO:0009860 pollen tube growth BP 0.134983107129458 AT1G16760//PRK4//LCR10 GO:0050790 regulation of catalytic activity BP 0.134983107129458 CYCP2;1//AT3G29185//ATSRP3 GO:0009967 positive regulation of signal transducti... BP 0.135642524949335 782_ GO:0023056 positive regulation of signaling BP 0.135642524949335 782_ GO:0048447 sepal morphogenesis BP 0.135642524949335 562_ GO:0048451 petal formation BP 0.135642524949335 562_ GO:0048453 sepal formation BP 0.135642524949335 562_ GO:0051336 regulation of hydrolase activity BP 0.135642524949335 332_ GO:0044702 single organism reproductive process BP 0.137843284364273 ATGID1C//HEMG2//SSR16//ATMSH6//AT1G16760//PRK4//AT3G29185//ATGA3OX2//EMB173//CRB//LCR10 GO:0006281 DNA repair BP 0.140521233739324 ATMSH6//AT1G18340//ATSRP3 GO:0006817 phosphate ion transport BP 0.142619805148946 732_ GO:0048442 sepal development BP 0.142619805148946 562_ GO:0048464 flower calyx development BP 0.142619805148946 562_ GO:0009790 embryo development BP 0.143155345101696 HEMG2//SSR16//AT3G29185//ATGA3OX2//CRB GO:0016109 tetraterpenoid biosynthetic process BP 0.144200705825599 ACT1//AT1G57770 GO:0016117 carotenoid biosynthetic process BP 0.144200705825599 ACT1//AT1G57770 GO:0009688 abscisic acid biosynthetic process BP 0.149541364013629 472_ GO:0043289 apocarotenoid biosynthetic process BP 0.149541364013629 472_ GO:1902645 tertiary alcohol biosynthetic process BP 0.149541364013629 472_ GO:0016108 tetraterpenoid metabolic process BP 0.149771802105033 ACT1//AT1G57770 GO:0016116 carotenoid metabolic process BP 0.149771802105033 ACT1//AT1G57770 GO:0000079 regulation of cyclin-dependent protein s... BP 0.156407641741448 894_ GO:0006364 rRNA processing BP 0.159516118412106 AT3G47070//PSAD-1//AT1G60230 GO:0016072 rRNA metabolic process BP 0.161458065158122 AT3G47070//PSAD-1//AT1G60230 GO:0002238 response to molecule of fungal origin BP 0.163219075090817 765_ GO:0010647 positive regulation of cell communicatio... BP 0.163219075090817 782_ GO:0046148 pigment biosynthetic process BP 0.163407301779212 ACT1//AT1G57770//ASE3 GO:0065009 regulation of molecular function BP 0.169297681177584 CYCP2;1//AT3G29185//ATSRP3 GO:0098655 cation transmembrane transport BP 0.169592481460671 ATCHX26//ATIREG1 GO:0098662 inorganic cation transmembrane transport BP 0.169592481460671 ATCHX26//ATIREG1 GO:0006897 endocytosis BP 0.169976097407093 001_ GO:0010440 stomatal lineage progression BP 0.169976097407093 894_ GO:0046520 sphingoid biosynthetic process BP 0.169976097407093 030_ GO:0098660 inorganic ion transmembrane transport BP 0.172460388835145 ATCHX26//ATIREG1 GO:0009687 abscisic acid metabolic process BP 0.176679138648943 472_ GO:0016106 sesquiterpenoid biosynthetic process BP 0.176679138648943 472_ GO:0043288 apocarotenoid metabolic process BP 0.176679138648943 472_ GO:0046519 sphingoid metabolic process BP 0.176679138648943 030_ GO:1902644 tertiary alcohol metabolic process BP 0.176679138648943 472_ GO:0006974 cellular response to DNA damage stimulus BP 0.177247103925211 ATMSH6//AT1G18340//ATSRP3 GO:0048444 floral organ morphogenesis BP 0.17822026349563 ATGID1C//ATMSH6 GO:0048563 post-embryonic organ morphogenesis BP 0.17822026349563 ATGID1C//ATMSH6 GO:0016485 protein processing BP 0.183328625414522 332_