GOID	TERM	ONTOLOGY	pValue	Genes
GO:0071478	cellular response to radiation	BP	0.000443223607067716	APRR7//PIF6//SIG3//ARR4//AtPIF4//PBCP
GO:0071482	cellular response to light stimulus	BP	0.000443223607067716	APRR7//PIF6//SIG3//ARR4//AtPIF4//PBCP
GO:0009893	positive regulation of metabolic process	BP	0.00092809754905246	CSK//RAP2.1//ATDCL4//ACD2//ATCOL4//AT5G48590//GAUT3//ABF3//AT4G33400//ADR1-L1//ATH1//LSF2//ATBET10//CDC48C//AFP1//ATGRAS2//ATMPK2//ARR4//AtBE2//AVDE1//ATHB-7
GO:0005982	starch metabolic process	BP	0.00189198188320573	ACD2//AT5G48590//A/N-InvE//AtCAL2//LTO1//ATCBF3//LSF2//APL2//FB//AtBE2
GO:0010017	red or far-red light signaling pathway	BP	0.001960829544441	APRR7//PIF6//ARR4//AtPIF4
GO:0071489	cellular response to red or far red ligh...	BP	0.001960829544441	APRR7//PIF6//ARR4//AtPIF4
GO:0009891	positive regulation of biosynthetic proc...	BP	0.0031053882588598	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ADR1-L1//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//ATMPK2//ARR4//AVDE1//ATHB-7
GO:0009416	response to light stimulus	BP	0.00396925741192467	CSK//ATOPT3//ATDCL4//ADG2//HAC11//AT5G04910//APRR7//PIF6//SIG3//ATROPGEF1//GAUT3//AT4G33400//ATH1//CSN6B//DIN4//ATBET10//CDC48C//GNR1//AT1G76570//AtJ8//ARR4//AtPol{lambda}//FB//AVDE1//AT1G51400//AtPIF4//PBCP
GO:0006334	nucleosome assembly	BP	0.0041680045807149	AT1G06760//AT2G28720//G-H2AX//HIS1-3//AT2G30620
GO:0034728	nucleosome organization	BP	0.0041680045807149	AT1G06760//AT2G28720//G-H2AX//HIS1-3//AT2G30620
GO:0006636	unsaturated fatty acid biosynthetic proc...	BP	0.00458715649726666	ATH1//FAD4//AVDE1//CAS1//SCPL8
GO:0033559	unsaturated fatty acid metabolic process	BP	0.00458715649726666	ATH1//FAD4//AVDE1//CAS1//SCPL8
GO:0048518	positive regulation of biological proces...	BP	0.00475843336625781	CSK//RAP2.1//ATDCL4//ACD2//ATCOL4//AT5G48590//ABIL4//HAC11//GAUT3//ABF3//AT4G33400//ADR1-L1//ATH1//ARF11//LSF2//ATBET10//CDC48C//AFP1//ATGRAS2//ATMPK2//ARR4//FB//AtBE2//AVDE1//ATHB-7
GO:0065004	protein-DNA complex assembly	BP	0.0050354533314868	AT1G06760//AT2G28720//G-H2AX//HIS1-3//AT2G30620
GO:0071824	protein-DNA complex subunit organization	BP	0.0050354533314868	AT1G06760//AT2G28720//G-H2AX//HIS1-3//AT2G30620
GO:0009314	response to radiation	BP	0.00557959463009807	CSK//ATOPT3//ATDCL4//ADG2//HAC11//AT5G04910//TRFL10//APRR7//PIF6//SIG3//ATROPGEF1//GAUT3//AT4G33400//ATH1//CSN6B//DIN4//ATBET10//CDC48C//GNR1//AT1G76570//AtJ8//ARR4//AtPol{lambda}//FB//AVDE1//AT1G51400//AtPIF4//PBCP
GO:0071214	cellular response to abiotic stimulus	BP	0.00593958726188111	APRR7//PIF6//SIG3//ARR4//AtPIF4//PBCP
GO:0031497	chromatin assembly	BP	0.00656571742594184	AT1G06760//AT2G28720//G-H2AX//HIS1-3//AT2G30620
GO:0007623	circadian rhythm	BP	0.00671848469301763	APRR7//ARR9//ATCBF3//EPR1//ARR4//FB//AtPIF4
GO:0048511	rhythmic process	BP	0.00671848469301763	APRR7//ARR9//ATCBF3//EPR1//ARR4//FB//AtPIF4
GO:0045893	positive regulation of transcription, DN...	BP	0.00700784821802921	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0051254	positive regulation of RNA metabolic pro...	BP	0.00700784821802921	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:1902680	positive regulation of RNA biosynthetic ...	BP	0.00700784821802921	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:1903508	positive regulation of nucleic acid-temp...	BP	0.00700784821802921	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0006323	DNA packaging	BP	0.00714103981684913	AT1G06760//AT2G28720//G-H2AX//HIS1-3//AT2G30620
GO:0009071	serine family amino acid catabolic proce...	BP	0.00836845415035682	AtLCD//ATH1//AVDE1//SCPL8
GO:0009639	response to red or far red light	BP	0.00838582214167225	ATDCL4//ADG2//APRR7//PIF6//GAUT3//AT4G33400//ATH1//CSN6B//CDC48C//AT1G76570//ARR4//FB//AtPIF4
GO:0045935	positive regulation of nucleobase-contai...	BP	0.00863468831124749	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0051173	positive regulation of nitrogen compound...	BP	0.00915061666762165	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0043067	regulation of programmed cell death	BP	0.00934881482942731	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ATPDI5//ARR4//AtPIF4
GO:0010628	positive regulation of gene expression	BP	0.0096906155827218	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0010941	regulation of cell death	BP	0.00974524507203967	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ATPDI5//ARR4//AtPIF4
GO:0044248	cellular catabolic process	BP	0.0106654677254086	ACD2//AT5G16070//CHY1//AT5G56900//AT5G35970//A/N-InvE//EMB2817//AT5G07800//AT5G04910//AtLCD//UPL7//AtCAL2//AT4G33160//ATH1//CSN6B//AT4G19860//AtTic20-IV//AT1G66630//LSF2//ABCE1//AtHrd1A//AT1G76570//ATGRAS2//ATGSTF5//ATILP1//AOAT1//AVDE1//APC10//SCPL8
GO:0009889	regulation of biosynthetic process	BP	0.0107660248859283	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ADR1-L1//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ATMPK2//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATCOAD//APC10//ATHB-7
GO:0010557	positive regulation of macromolecule bio...	BP	0.0114625562636592	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0031328	positive regulation of cellular biosynth...	BP	0.0124387050865991	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:1901565	organonitrogen compound catabolic proces...	BP	0.0131038913689015	ACD2//CHY1//AT5G35970//AtLCD//ATH1//AT1G76570//AVDE1//SCPL8
GO:0006355	regulation of transcription, DNA-templat...	BP	0.0134345246621432	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATHB-7
GO:1903506	regulation of nucleic acid-templated tra...	BP	0.0134345246621432	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATHB-7
GO:2001141	regulation of RNA biosynthetic process	BP	0.0134345246621432	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATHB-7
GO:0009628	response to abiotic stimulus	BP	0.0137087090260958	CSK//ATOPT3//RAP2.1//ATDCL4//CHY1//ADG2//HAC11//AT5G04910//TRFL10//APRR7//PIF6//SIG3//AtCAL2//ATROPGEF1//GAUT3//ABF3//AT4G33400//ATH1//FAD4//CSN6B//ATCBF3//DIN4//AT3G07950//AT3G08620//ATBET10//CDC48C//GNR1//AT1G76570//AFP1//PFC1//EPR1//ATCDSP32//AtJ8//ATPDI5//AOAT1//ARR4//AtPol{lambda}//FB//AVDE1//AT1G51400//AtPIF4//ATCOAD//HIS1-3//ATHB-7//PBCP
GO:0010604	positive regulation of macromolecule met...	BP	0.0142082018873941	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0019219	regulation of nucleobase-containing comp...	BP	0.0142378513743412	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATCOAD//APC10//ATHB-7
GO:0051252	regulation of RNA metabolic process	BP	0.0147816779365808	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATHB-7
GO:0006073	cellular glucan metabolic process	BP	0.0149417564800864	ACD2//AT5G48590//A/N-InvE//ADG2//AtCAL2//LTO1//ATCBF3//LSF2//APL2//FB//AtBE2
GO:0044042	glucan metabolic process	BP	0.0149417564800864	ACD2//AT5G48590//A/N-InvE//ADG2//AtCAL2//LTO1//ATCBF3//LSF2//APL2//FB//AtBE2
GO:0031325	positive regulation of cellular metaboli...	BP	0.0153597210905688	CSK//RAP2.1//ATDCL4//ATCOL4//GAUT3//ABF3//AT4G33400//ATH1//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0010363	regulation of plant-type hypersensitive ...	BP	0.0154831325701025	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0009790	embryo development	BP	0.0158491121112921	ATDCL4//A/N-InvE//GAUT3//ATH1//EMB2271//emb2076//ANAC054//CDC48C//POD1//EMB2654//ATPDI5//EMB2279//ARR4//EMB2219//emb1688
GO:0031326	regulation of cellular biosynthetic proc...	BP	0.0166472551470657	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATCOAD//APC10//ATHB-7
GO:0051171	regulation of nitrogen compound metaboli...	BP	0.0177446412169661	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATCOAD//APC10//ATHB-7
GO:0071103	DNA conformation change	BP	0.0180813094340655	AT1G06760//AT2G28720//G-H2AX//HIS1-3//AT2G30620
GO:0048316	seed development	BP	0.0189176239801066	ATDCL4//A/N-InvE//ARR9//GAUT3//ATH1//EMB2271//emb2076//ANAC054//CDC48C//ASG5//EMB2654//ATPDI5//EMB2279//ARR4//EMB2219//emb1688
GO:0051186	cofactor metabolic process	BP	0.0200714476823708	ACD2//AT5G35970//ADG2//LTO1//ATH1//CNX7//PGL1//AT1G76570//ATSIRB//PnsL2//AT2G03690//AVDE1//ATCOAD//CAS1//SCPL8
GO:0009987	cellular process	BP	0.020168951667707	AT2G40935//ATCKX1//CSK//ATOPT3//RAP2.1//AT1G26190//ATDCL4//MED31//AT5G20840//ACD2//AAP3//AT5G16070//AT5G35170//AT5G26760//ATCOL4//ATFOLT1//CHY1//OBP4//AT5G58490//AT5G56900//ATM2//VPS26A//NF-YC6//AT5G49990//AT5G48590//NF-YB2//ABIL4//AT5G35970//AT5G24010//A/N-InvE//ADG2//KAC1//HAC11//AT5G09770//EMB2817//AT5G07800//AT5G04910//TRFL10//APRR7//DAU1//AT5G01940//AT5G01020//AT5G01200//PIF6//AtLCD//AT3G59110//AT3G57370//ARR9//AT3G53940//SIG3//UPL7//AtCAL2//ATEXLA1//AT3G45440//AT4G38900//ATROPGEF1//GAUT3//ATRECQ3//LTO1//ABF3//AT4G33400//AT4G33160//ADR1-L1//ATH1//PDE327//PFK1//NZZ//FAD4//CSN6B//ATCNFU3//ATCBF3//EMB2271//AT4G19860//ALMT12//CNX7//AT4G05070//AT4G03600//AtTic20-IV//AOP//AT-RSH1//ZYP1//ARF11//MCD1//PGL1//AT1G66630//LSF2//ABCE1//ANAC054//DIN4//QWRF1//WIP3//ATPUB29//PIFI//AtHrd1A//AT3G16120//AT3G14330//ATRALF23//AT3G07950//ATTLP9//ATBET10//CDC48C//ASG5//ADR2//GNR1//AT1G60890//ATIRT3//AT1G76570//POD1//AT1G79870//AFP1//ATZIP4//AT2G43670//AT1G06760//PYL9//ATGRAS2//ATVTI12//AL7//APL2//PFC1//EPR1//ATCDSP32//AT1G80930//AtJ8//ATMPK2//ATGSTF5//AT1G72820//AT1G72810//ATSIRB//ATPDI5//ATILP1//PnsL2//AOAT1//AT2G05120//ARR4//AtPol{lambda}//AT2G28720//AT2G17033//SCL21//AT1G31220//AT2G03690//AT1G02160//FB//AtBE2//HAP5C//G-H2AX//AT1G61360//AVDE1//AT1G03920//AtPIF4//ATCOAD//APC10//AT2G18330//HIS1-3//HCS1//PP1-AT//ATHB-7//CAS1//AT2G44870//AT2G38180//AT2G30840//PBCP//SCPL8//AT2G30620
GO:0008219	cell death	BP	0.0203083306095892	ACD2//AAP3//ATCOL4//ABF3//ADR1-L1//AFP1//ATMPK2//ATPDI5//ARR4//AtPIF4
GO:0016265	death	BP	0.0203083306095892	ACD2//AAP3//ATCOL4//ABF3//ADR1-L1//AFP1//ATMPK2//ATPDI5//ARR4//AtPIF4
GO:0080135	regulation of cellular response to stres...	BP	0.0203772035241886	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0010556	regulation of macromolecule biosynthetic...	BP	0.0207154239589104	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//APC10//ATHB-7
GO:2000112	regulation of cellular macromolecule bio...	BP	0.0207154239589104	CSK//RAP2.1//ATDCL4//MED31//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//APC10//ATHB-7
GO:0009106	lipoate metabolic process	BP	0.023297960929873	ATH1//AVDE1//SCPL8
GO:0010154	fruit development	BP	0.0234961843347018	ATDCL4//A/N-InvE//ARR9//GAUT3//ATH1//EMB2271//emb2076//ANAC054//CDC48C//ASG5//EMB2654//ATPDI5//EMB2279//ARR4//EMB2219//emb1688
GO:0006733	oxidoreduction coenzyme metabolic proces...	BP	0.0235777000006179	ACD2//ADG2//LTO1//ATH1//PGL1//PnsL2//AT2G03690//AVDE1//SCPL8
GO:0012501	programmed cell death	BP	0.0243589733042589	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ATPDI5//ARR4//AtPIF4
GO:0009056	catabolic process	BP	0.0249313395880554	ATCKX1//AT5G20840//ACD2//AT5G16070//CHY1//AT5G56900//AT5G35970//A/N-InvE//EMB2817//AT5G07800//AT5G04910//AtLCD//UPL7//AtCAL2//AT4G33160//ATH1//PFK1//CSN6B//AT4G19860//AtTic20-IV//AT1G66630//LSF2//ABCE1//AtHrd1A//AT1G76570//ATGRAS2//ATGSTF5//ATILP1//AOAT1//AVDE1//APC10//SCPL8
GO:0031347	regulation of defense response	BP	0.025874460743106	ACD2//AAP3//ATCOL4//AT5G48590//AT5G38980//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0009108	coenzyme biosynthetic process	BP	0.0259222766340941	ATH1//CNX7//AT2G03690//AVDE1//ATCOAD//SCPL8
GO:0051188	cofactor biosynthetic process	BP	0.0259766085019513	ACD2//ATH1//CNX7//ATSIRB//AT2G03690//AVDE1//ATCOAD//CAS1//SCPL8
GO:0009626	plant-type hypersensitive response	BP	0.0262838192560242	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0034050	host programmed cell death induced by sy...	BP	0.0262838192560242	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0044712	single-organism catabolic process	BP	0.0274779976212003	AT5G20840//ACD2//CHY1//AT5G35970//A/N-InvE//EMB2817//AT5G07800//AT5G04910//AtLCD//ATH1//PFK1//AT4G19860//AtTic20-IV//ABCE1//AT1G76570//ATGSTF5//ATILP1//AOAT1//AVDE1//APC10//SCPL8
GO:0019252	starch biosynthetic process	BP	0.0277830902384403	ACD2//AT5G48590//AtCAL2//LTO1//LSF2//APL2//AtBE2
GO:1901606	alpha-amino acid catabolic process	BP	0.028508457197415	CHY1//AtLCD//ATH1//AVDE1//SCPL8
GO:0019637	organophosphate metabolic process	BP	0.028829435514939	AT2G40935//AT5G20840//ACD2//AT5G35170//ADG2//AT3G53940//LTO1//ATH1//FAD4//AT4G19860//CNX7//AT4G05070//AT4G03600//AT-RSH1//PGL1//AT1G60890//AT1G76570//PnsL2//AT1G31220//AVDE1//ATCOAD//AT2G18330//CAS1//SCPL8
GO:0044271	cellular nitrogen compound biosynthetic ...	BP	0.0290444067203164	CSK//RAP2.1//ATDCL4//MED31//ACD2//AT5G35170//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//AT5G09770//APRR7//AT5G01200//AT3G57370//ARR9//AT3G53940//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//AtHrd1A//ATTLP9//ATBET10//CDC48C//GNR1//AFP1//ATGRAS2//AL7//EPR1//ATSIRB//ARR4//SCL21//AT1G31220//FB//HAP5C//AVDE1//AtPIF4//ATCOAD//AT2G18330//ATHB-7//CAS1//SCPL8
GO:0044802	single-organism membrane organization	BP	0.029886647744886	AAP3//ATCOL4//ADG2//ADR1-L1//ATH1//AFP1//ATMPK2//ARR4//AtPIF4//CAS1//AT2G44870//PBCP
GO:0042752	regulation of circadian rhythm	BP	0.03108397753834	APRR7//ARR4//FB
GO:0009063	cellular amino acid catabolic process	BP	0.0316045415560632	CHY1//AtLCD//ATH1//AVDE1//SCPL8
GO:0009793	embryo development ending in seed dorman...	BP	0.031795968981697	ATDCL4//A/N-InvE//GAUT3//ATH1//EMB2271//emb2076//ANAC054//CDC48C//EMB2654//EMB2279//ARR4//EMB2219//emb1688
GO:0061024	membrane organization	BP	0.0353265184085479	AAP3//ATCOL4//ADG2//ADR1-L1//ATH1//AFP1//ATMPK2//ARR4//AtPIF4//CAS1//AT2G44870//PBCP
GO:0045088	regulation of innate immune response	BP	0.0355068972512486	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0080134	regulation of response to stress	BP	0.036162669349769	ACD2//AAP3//ATCOL4//AT5G48590//AT5G38980//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0002682	regulation of immune system process	BP	0.0366512226826029	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0050776	regulation of immune response	BP	0.0366512226826029	ACD2//AAP3//ATCOL4//ADR1-L1//AFP1//ATMPK2//ARR4//AtPIF4
GO:0044763	single-organism cellular process	BP	0.0366713196689364	AT2G40935//CSK//ATOPT3//AT1G26190//ATDCL4//AT5G20840//ACD2//AAP3//AT5G35170//AT5G26760//ATCOL4//ATFOLT1//CHY1//AT5G58490//ATM2//VPS26A//AT5G49990//AT5G48590//ABIL4//AT5G35970//AT5G24010//A/N-InvE//ADG2//KAC1//HAC11//AT5G09770//EMB2817//AT5G07800//AT5G04910//TRFL10//APRR7//DAU1//AT5G01020//PIF6//AtLCD//AT3G57370//ARR9//AT3G53940//AtCAL2//ATEXLA1//AT4G38900//ATROPGEF1//GAUT3//LTO1//ABF3//AT4G33400//ADR1-L1//ATH1//PFK1//NZZ//FAD4//AT4G19860//ALMT12//CNX7//AT4G05070//AT4G03600//AtTic20-IV//AOP//AT-RSH1//ZYP1//ARF11//PGL1//LSF2//ABCE1//ANAC054//DIN4//PIFI//AT3G16120//ATRALF23//CDC48C//ASG5//ADR2//GNR1//AT1G60890//ATIRT3//AT1G76570//POD1//AFP1//ATZIP4//AT2G43670//PYL9//ATGRAS2//ATVTI12//APL2//ATCDSP32//ATMPK2//ATGSTF5//AT1G72820//AT1G72810//ATSIRB//ATPDI5//ATILP1//PnsL2//AOAT1//AT2G05120//ARR4//AtPol{lambda}//AT2G17033//SCL21//AT1G31220//AT2G03690//AT1G02160//AtBE2//AT1G61360//AVDE1//AtPIF4//ATCOAD//APC10//AT2G18330//HCS1//ATHB-7//CAS1//AT2G44870//PBCP//SCPL8
GO:0006351	transcription, DNA-templated	BP	0.036852310527096	CSK//RAP2.1//ATDCL4//MED31//AT5G35170//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//AT5G09770//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATHB-7
GO:0097659	nucleic acid-templated transcription	BP	0.036852310527096	CSK//RAP2.1//ATDCL4//MED31//AT5G35170//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//AT5G09770//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATHB-7
GO:0015996	chlorophyll catabolic process	BP	0.036939877940112	ACD2//AT5G35970//AT1G76570
GO:0046149	pigment catabolic process	BP	0.036939877940112	ACD2//AT5G35970//AT1G76570
GO:0032774	RNA biosynthetic process	BP	0.0372563203067307	CSK//RAP2.1//ATDCL4//MED31//AT5G35170//AT5G26760//ATCOL4//OBP4//NF-YC6//NF-YB2//HAC11//AT5G09770//APRR7//AT5G01200//AT3G57370//ARR9//SIG3//AT4G38900//GAUT3//ABF3//AT4G33400//ATH1//ATCBF3//ARF11//ANAC054//ATTLP9//ATBET10//CDC48C//AFP1//ATGRAS2//AL7//EPR1//ARR4//SCL21//FB//HAP5C//AVDE1//AtPIF4//ATHB-7
GO:1901575	organic substance catabolic process	BP	0.0376635394514845	AT5G20840//ACD2//AT5G16070//CHY1//AT5G56900//AT5G35970//A/N-InvE//EMB2817//AT5G04910//AtLCD//UPL7//AtCAL2//AT4G33160//ATH1//PFK1//CSN6B//AT4G19860//AT1G66630//LSF2//ABCE1//AtHrd1A//AT1G76570//ATGRAS2//ATILP1//AOAT1//AVDE1//APC10//SCPL8
GO:0048522	positive regulation of cellular process	BP	0.0396658457703966	CSK//RAP2.1//ATDCL4//ATCOL4//ABIL4//HAC11//GAUT3//ABF3//AT4G33400//ATH1//ARF11//ATBET10//CDC48C//AFP1//ATGRAS2//AVDE1//ATHB-7
GO:0006546	glycine catabolic process	BP	0.0400646207677879	ATH1//AVDE1//SCPL8
GO:0006787	porphyrin-containing compound catabolic ...	BP	0.0400646207677879	ACD2//AT5G35970//AT1G76570
GO:0033015	tetrapyrrole catabolic process	BP	0.0400646207677879	ACD2//AT5G35970//AT1G76570
GO:0051187	cofactor catabolic process	BP	0.0433188783680447	ACD2//AT5G35970//AT1G76570
GO:0006333	chromatin assembly or disassembly	BP	0.0440558692516825	AT1G06760//AT2G28720//G-H2AX//HIS1-3//AT2G30620
GO:0000160	phosphorelay signal transduction system	BP	0.044266774444106	APRR7//ARR9//ABF3//ARR4
GO:0044242	cellular lipid catabolic process	BP	0.0456980154642518	CHY1//EMB2817//AT5G04910//AT4G19860//ABCE1//ATILP1//AOAT1
GO:0006732	coenzyme metabolic process	BP	0.0461886572098267	ACD2//ADG2//LTO1//ATH1//CNX7//PGL1//PnsL2//AT2G03690//AVDE1//ATCOAD//SCPL8