GOID TERM ONTOLOGY pValue Genes GO:0019684 photosynthesis, light reaction BP 4.95783947945639e-07 CBP60G//LHCB3//APE2//CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//PGK1//GAPA//CP24//PETE1//PSAD-2//LHCB4.3//GDCH//AT2G42220 GO:0006811 ion transport BP 5.6475676819137e-06 ATBCB//AIP2//AT5G61560//RPT3//ATCNGC1//AGP22//ATCLC-C//ATWRKY48//APE2//NDH18//AT5G37610//ATGLR2.5//LHCB4.1//ATPIRIN1//ATJRG21//LHCA1//OEC33//PSBQ//ATWRKY28//ATPRR2//LHCB5//ATGSR2//AT3G22910//AT3G22570//ATPAP18//PGK1//GAPA//AVMA10//CP24//AT1G64380//ATBETAFRUCT4//AT1G63010//ANAC001//PETE1//CYP705A25//AT1G22440//ATCHX1//AT1G21010//PSAD-2//AT1G27480//cdf3//ATRNS1//KCS11 GO:0015979 photosynthesis BP 1.19246061495245e-05 CBP60G//LHCB3//APE2//CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//PGK1//GAPA//CP24//PETE1//PSAD-2//LHCB4.3//GDCH//AT2G42220 GO:0034470 ncRNA processing BP 2.02813338105043e-05 CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//GAPA//ATIPT7//LHCB4.3//GDCH GO:0006364 rRNA processing BP 2.69140816899215e-05 CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//GAPA//LHCB4.3//GDCH GO:0016072 rRNA metabolic process BP 2.92667425949867e-05 CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//GAPA//LHCB4.3//GDCH GO:0006812 cation transport BP 4.94784833437424e-05 ATBCB//ATCNGC1//AGP22//ATWRKY48//NDH18//LHCB4.1//ATPIRIN1//LHCA1//OEC33//PSBQ//ATPRR2//LHCB5//ATGSR2//AT3G22910//AT3G22570//ATPAP18//PGK1//GAPA//AVMA10//CP24//AT1G64380//ATBETAFRUCT4//AT1G63010//PETE1//CYP705A25//AT1G22440//ATCHX1//AT1G21010//PSAD-2//AT1G27480//ATRNS1//KCS11 GO:0010583 response to cyclopentenone BP 5.383895241972e-05 TCH4//ATEXPB3//ATWRKY28//PMZ//AT3G04000//AtRLP30//anac032//ATGSTU22//ATGSTU24//UGT74E2//ATGSTU1//ABCC2 GO:1901700 response to oxygen-containing compound BP 5.45807577657151e-05 ATCYSA//ATMYB75//ATBCB//AIP2//CBP60G//AT5G61560//TCH4//AGP22//ATHS83//ATWRKY48//DIR1//AT5G45630//ATRAB-F2A//JAS1//AT5G11650//LHCB4.1//AT3G60690//ATPIRIN1//AT3G55430//LHCA1//ARP1//AT3G52480//OEC33//ATEDS1//ATHXK1//PSBQ//ATPRR2//LHCB5//ARF5//E12A11//AT3G10930//ATGSR2//PMZ//AT3G19970//AT3G22570//PGK1//GAPA//ATMBF1C//VPS60.1//AtRLP30//AT1G43910//AT1G64380//ATBETAFRUCT4//AT1G12130//AFB3//ANAC002//SCL-3//CYP705A25//AT1G22440//ATPEPR1//AT1G14200//ALDH7B4//UGT74E2//ENO2//ATNHL10//AtSOT1//AtOPR3//AT2G27500//cdf3//GDCH//DREB19//AKR4C9//AKR4C8//AT2G19310 GO:0010033 response to organic substance BP 5.77284693754698e-05 AT2G23270//ATMYB75//AT5G10695//ATBCB//AIP2//CBP60G//AT5G61560//RPT3//TCH4//ATWRKY48//DIR1//AT5G45630//ATRAB-F2A//ATUBC8//JAS1//AT5G11650//AT5G06370//LHCB4.1//AT3G60690//ATPIRIN1//AT3G55430//LHCA1//ARP1//AT3G52480//OEC33//MPT2//ATEDS1//ATHXK1//ATEXPB3//PSBQ//ATWRKY28//APRR2//LHCB5//ARF5//E12A11//AT3G10930//ATGSR2//PMZ//AT3G19970//PGK1//GAPA//ATMBF1C//AT3G04000//VPS60.1//AtRLP30//AT1G43910//anac032//AT1G64380//AT1G72180//ATGSTU22//ATBETAFRUCT4//AT1G12130//AT1G04810//AFB3//ANAC002//SCL-3//ATPEPR1//ATGSTU24//ALDH7B4//AT1G05710//UGT74E2//ENO2//ATNHL10//AT2G21220//AtSOT1//AtOPR3//AT2G27500//ATGSTU1//GDCH//ABCC2 GO:0009765 photosynthesis, light harvesting BP 0.000106240711975212 LHCB3//LHCB4.1//LHCA1//LHCB5//CP24//LHCB4.3 GO:0009407 toxin catabolic process BP 0.000113773909266423 RPT3//ATWRKY28//PMZ//AT3G04000//AtRLP30//anac032//ATGSTU22//AT1G04810//ATGSTU24//UGT74E2//ATGSTU6//ATGSTU1//ATGSTF5//ABCC2 GO:0090487 secondary metabolite catabolic process BP 0.000113773909266423 RPT3//ATWRKY28//PMZ//AT3G04000//AtRLP30//anac032//ATGSTU22//AT1G04810//ATGSTU24//UGT74E2//ATGSTU6//ATGSTU1//ATGSTF5//ABCC2 GO:0042221 response to chemical BP 0.00011740190098936 AT2G23270//ATCYSA//ATMYB75//AT5G10695//ATBCB//AIP2//CBP60G//AT5G61560//RPT3//TCH4//AGP22//ATHS83//ATWRKY48//DIR1//AT5G45630//ATRAB-F2A//ATUBC8//CaS//JAS1//AT5G11650//AT5G06370//LHCB4.1//AT3G60690//ATPIRIN1//AT3G55430//LHCA1//ARP1//AtCDC48B//AT3G52480//OEC33//MPT2//ATEDS1//ATHXK1//ATEXPB3//PSBQ//ATWRKY28//APRR2//ATPRR2//LHCB5//ARF5//E12A11//AT3G10930//ATGSR2//PMZ//AT3G19970//AT3G22570//AtDJ1A//PGK1//GAPA//ATMBF1C//AT3G04000//VPS60.1//AtRLP30//AT1G43910//anac032//AT1G64380//AT1G72180//ATGSTU22//ATBETAFRUCT4//AT1G12130//AT1G04810//AFB3//ANAC002//SCL-3//CYP705A25//AT1G22440//ATPEPR1//ATGSTU24//AT1G14200//ALDH7B4//AT1G05710//UGT74E2//FBA6//ENO2//ATNHL10//AT2G21220//AtSOT1//AtOPR3//AT2G27500//ATGSTU1//cdf3//GDCH//DREB19//AKR4C9//AKR4C8//ABCC2//AT2G19310 GO:0034660 ncRNA metabolic process BP 0.000137730757620693 CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//GAPA//ATIPT7//LHCB4.3//GDCH GO:0009404 toxin metabolic process BP 0.000224089153518711 RPT3//ATWRKY28//PMZ//AT3G04000//AtRLP30//anac032//ATGSTU22//AT1G04810//ATGSTU24//UGT74E2//ATGSTU6//ATGSTU1//ATGSTF5//ABCC2 GO:0006520 cellular amino acid metabolic process BP 0.000241701790904582 AAT2//APE2//AT5G36160//CaS//ACSF//AT3G54400//AT3G51660//PSAE-1//LHCB5//PSAD-1//ATGSR2//AtDJ1A//PGK1//AT3G19480//ATHMT-1//AT3G04000//CP24//ATCSLE1//AFB3//PETE1//CYP702A1//AtOPR3//ATGSTU1//GDCH//AKR4C8//AT2G42220 GO:0006810 transport BP 0.000279555725524107 ATNDT1//AT5G10695//ATBCB//AIP2//CBP60G//AT5G61560//AT5G59330//RPT3//ATCNGC1//AGP22//ATCLC-C//ATWRKY48//AT5G48650//AT5G48490//DIR1//AT5G46630//AT5G46780//APE2//ATRAB-F2A//PDLP1//NDH18//ATUBC8//AT5G37610//ATGLR2.5//AtRABH1e//LHCB4.1//ATPIRIN1//ATJRG21//LHCA1//OEC33//MPT2//ATEDS1//ATHXK1//PSBQ//ATWRKY28//ATPRR2//LHCB5//ATI2//ATGSR2//PMZ//AT3G19970//AT3G22910//AT3G22570//ATPAP18//PGK1//GAPA//AT3G21670//VPS60.1//AVMA10//AtRLP30//CP24//AT1G64380//ATBETAFRUCT4//AT1G63010//ARA//ANAC001//AT1G49960//PETE1//CYP705A25//PATL2//AT1G22440//ATCHX1//AT1G10730//AT1G21010//PSAD-2//ATNAT7//ATMEMB11//ATNHL10//AtSOT1//AT1G27480//ACLA-3//AT2G27500//AT2G48020//cdf3//ATRNS1//ABCC2//KCS11 GO:0006820 anion transport BP 0.00050317254527052 AIP2//AT5G61560//RPT3//AGP22//ATCLC-C//ATWRKY48//APE2//AT5G37610//ATGLR2.5//ATPIRIN1//ATJRG21//ATWRKY28//ATPRR2//AT3G22570//ATPAP18//AT1G64380//AT1G63010//ANAC001//CYP705A25//AT1G22440//AT1G21010//cdf3//ATRNS1 GO:0051234 establishment of localization BP 0.000508957264705729 ATNDT1//AT5G10695//ATBCB//AIP2//CBP60G//AT5G61560//AT5G59330//RPT3//ATCNGC1//AGP22//ATCLC-C//ATWRKY48//AT5G48650//AT5G48490//DIR1//AT5G46630//AT5G46780//APE2//ATRAB-F2A//PDLP1//NDH18//ATUBC8//AT5G37610//ATGLR2.5//AtRABH1e//LHCB4.1//ATPIRIN1//ATJRG21//LHCA1//OEC33//MPT2//ATEDS1//ATHXK1//PSBQ//ATWRKY28//ATPRR2//LHCB5//ATI2//ATGSR2//PMZ//AT3G19970//AT3G22910//AT3G22570//ATPAP18//PGK1//GAPA//AT3G21670//VPS60.1//AVMA10//AtRLP30//CP24//AT1G64380//ATBETAFRUCT4//AT1G63010//ARA//ANAC001//AT1G49960//PETE1//CYP705A25//PATL2//AT1G22440//ATCHX1//AT1G10730//AT1G21010//PSAD-2//ATNAT7//ATMEMB11//ATNHL10//AtSOT1//AT1G27480//ACLA-3//AT2G27500//AT2G48020//cdf3//ATRNS1//ABCC2//KCS11 GO:0044765 single-organism transport BP 0.000597068782804991 ATNDT1//AT5G10695//ATBCB//AIP2//CBP60G//AT5G61560//AT5G59330//RPT3//ATCNGC1//AGP22//ATCLC-C//ATWRKY48//AT5G48490//DIR1//AT5G46780//APE2//ATRAB-F2A//NDH18//AT5G37610//ATGLR2.5//AtRABH1e//LHCB4.1//ATPIRIN1//ATJRG21//LHCA1//OEC33//ATEDS1//ATHXK1//PSBQ//ATWRKY28//ATPRR2//LHCB5//ATI2//ATGSR2//PMZ//AT3G19970//AT3G22910//AT3G22570//ATPAP18//PGK1//GAPA//AT3G21670//VPS60.1//AVMA10//AtRLP30//CP24//AT1G64380//ATBETAFRUCT4//AT1G63010//ANAC001//AT1G49960//PETE1//CYP705A25//AT1G22440//ATCHX1//AT1G21010//PSAD-2//ATNAT7//ATNHL10//AtSOT1//AT1G27480//ACLA-3//AT2G27500//AT2G48020//cdf3//ATRNS1//ABCC2//KCS11 GO:0042254 ribosome biogenesis BP 0.00064515195225793 CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//GAPA//LHCB4.3//GDCH GO:0050896 response to stimulus BP 0.000667234672260775 AT2G23270//ATCYSA//ATMYB75//AT5G10695//ATBCB//AIP2//CBP60G//ATEB1C//AT5G61560//RPT3//TCH4//AGP22//ATHS83//ATWRKY48//DIR1//AT5G46780//APE2//AT5G45630//ATRAB-F2A//NDH18//ATUBC8//AT5G40060//CaS//AT5G18130//AT5G13200//JAS1//AT5G11650//ATGLR2.5//AtRABH1e//AT5G06370//SIS//LHCB4.1//AT3G60690//ATPIRIN1//AT3G57680//ACSF//AT3G55430//LHCA1//ARP1//AtCDC48B//AT3G52480//AT3G51660//OEC33//ATCKA2//MPT2//ATEDS1//ATHXK1//ATEXPB3//AT4G25260//AT4G22730//PSBQ//ATWRKY28//APRR2//ATPRR2//LHCB5//AT4G09360//AT4G02530//ARF5//E12A11//ATWI-12//AT3G10930//ATGSR2//PMZ//AT3G19970//AT3G22910//AT3G22570//AtDJ1A//AT3G20340//PGK1//GAPA//ATMBF1C//AT3G04000//VPS60.1//AtRLP30//CP24//AT1G43910//anac032//AT1G64380//AT1G72180//AT1G67600//ATTI2//ATTI1//AT1G15010//ATGSTU22//ATBETAFRUCT4//AT1G12130//AT1G63010//LCR78//AT1G04810//AFB3//ARA//ANAC002//KCS1//SCL-3//CYP705A25//AT1G22440//ATPEPR1//ATGSTU24//AT1G14200//ALDH7B4//AT1G05710//UGT74E2//AT2G15320//FBA6//ENO2//ATNHL10//AT2G21220//AtSOT1//ATMLO8//AtOPR3//AT2G27500//LHCB4.3//ATSRP2//ATGSTU1//cdf3//ATGSTF5//GDCH//ATRNS1//DREB19//AKR4C9//AKR4C8//ABCC2//AT2G19310//AT2G34930//CYP71A12//KCS11 GO:1902578 single-organism localization BP 0.00072025870362169 ATNDT1//AT5G10695//ATBCB//AIP2//CBP60G//AT5G61560//AT5G59330//RPT3//ATCNGC1//AGP22//ATCLC-C//ATWRKY48//AT5G48490//DIR1//AT5G46780//APE2//ATRAB-F2A//NDH18//AT5G37610//ATGLR2.5//AtRABH1e//LHCB4.1//ATPIRIN1//ATJRG21//LHCA1//OEC33//ATEDS1//ATHXK1//PSBQ//ATWRKY28//ATPRR2//LHCB5//ATI2//ATGSR2//PMZ//AT3G19970//AT3G22910//AT3G22570//ATPAP18//PGK1//GAPA//AT3G21670//VPS60.1//AVMA10//AtRLP30//CP24//AT1G64380//ATBETAFRUCT4//AT1G63010//ANAC001//AT1G49960//PETE1//CYP705A25//AT1G22440//ATCHX1//AT1G21010//PSAD-2//ATNAT7//ATNHL10//AtSOT1//AT1G27480//ACLA-3//AT2G27500//AT2G48020//cdf3//ATRNS1//ABCC2//KCS11 GO:0022613 ribonucleoprotein complex biogenesis BP 0.000757600535353135 CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//GAPA//LHCB4.3//GDCH GO:0009642 response to light intensity BP 0.000841384698717702 ATBCB//ATHS83//APE2//LHCB4.1//ATPIRIN1//LHCA1//OEC33//PSBQ//LHCB5//GAPA//ATMBF1C//AT1G14200//AT2G19310 GO:1901607 alpha-amino acid biosynthetic process BP 0.000865354221946692 APE2//AT5G36160//CaS//ACSF//AT3G54400//PSAE-1//LHCB5//PSAD-1//ATGSR2//PGK1//AT3G19480//ATHMT-1//CP24//AFB3//PETE1//GDCH//AT2G42220 GO:0070838 divalent metal ion transport BP 0.000886113159823235 ATCNGC1//NDH18//OEC33//ATGSR2//AT3G22910//PGK1//CP24//ATBETAFRUCT4//AT1G63010//PETE1//PSAD-2//AT1G27480//KCS11 GO:0072511 divalent inorganic cation transport BP 0.000932820930232116 ATCNGC1//NDH18//OEC33//ATGSR2//AT3G22910//PGK1//CP24//ATBETAFRUCT4//AT1G63010//PETE1//PSAD-2//AT1G27480//KCS11 GO:0006091 generation of precursor metabolites and ... BP 0.000933174486987913 CBP60G//LHCB3//APE2//CaS//LHCB4.1//ACSF//LHCA1//OEC33//PSAE-1//PSBQ//LHCB5//AT4G02530//PSAD-1//ATGSR2//PGK1//GAPA//CP24//PETE1//PSAD-2//FBA6//ENO2//LHCB4.3//GDCH//AT2G42220 GO:0009070 serine family amino acid biosynthetic pr... BP 0.0010324488581203 APE2//CaS//ACSF//AT3G54400//PSAE-1//LHCB5//PSAD-1//PGK1//AT3G19480//CP24//PETE1//GDCH//AT2G42220 GO:0046482 para-aminobenzoic acid metabolic process BP 0.00114942962904053 AtDJ1A//AT3G04000//ATCSLE1//ATGSTU1//AKR4C8 GO:0015711 organic anion transport BP 0.00118422499244878 AIP2//AT5G61560//RPT3//ATWRKY48//APE2//ATGLR2.5//ATJRG21//ATWRKY28//ATPAP18//AT1G64380//ANAC001//AT1G21010//cdf3//ATRNS1 GO:0009657 plastid organization BP 0.00123968646457765 AT5G61670//NDH18//CaS//ACSF//AT3G56290//OEC33//PSAE-1//PSBQ//AT4G02530//PSAD-1//PGK1//GAPA//GDCH//YCF37 GO:0000097 sulfur amino acid biosynthetic process BP 0.00129730957301894 APE2//CaS//ACSF//AT3G54400//PSAE-1//LHCB5//PSAD-1//PGK1//ATHMT-1//CP24//AFB3//PETE1//GDCH//AT2G42220 GO:0051179 localization BP 0.00141645680413933 ATNDT1//AT5G10695//ATBCB//AIP2//CBP60G//AT5G61560//AT5G59330//RPT3//ATCNGC1//AGP22//ATCLC-C//ATWRKY48//AT5G48650//AT5G48490//DIR1//AT5G46630//AT5G46780//APE2//ATRAB-F2A//PDLP1//NDH18//ATUBC8//AT5G37610//ATGLR2.5//AtRABH1e//LHCB4.1//ATPIRIN1//ATJRG21//LHCA1//OEC33//MPT2//ATEDS1//ATHXK1//PSBQ//ATWRKY28//ATPRR2//LHCB5//ATI2//ATGSR2//PMZ//AT3G19970//AT3G22910//AT3G22570//ATPAP18//PGK1//GAPA//AT3G21670//VPS60.1//AVMA10//AtRLP30//CP24//AT1G64380//ATBETAFRUCT4//AT1G63010//ARA//ANAC001//AT1G49960//PETE1//CYP705A25//PATL2//AT1G22440//ATPEPR1//ATCHX1//AT1G10730//AT1G21010//PSAD-2//ATNAT7//ATMEMB11//ATNHL10//AtSOT1//AT1G27480//ACLA-3//AT2G27500//AT2G48020//cdf3//ATRNS1//ABCC2//KCS11 GO:0044283 small molecule biosynthetic process BP 0.00147227926098414 ATBCB//CBP60G//AGP22//ATPPOX//APE2//AT5G36160//CaS//JAS1//ACSF//AT3G56290//AT3G54400//AT3G51660//ATEDS1//PSAE-1//LHCB5//AT4G02530//PSAD-1//ATGSR2//AT3G19970//AT3G22570//AtDJ1A//PGK1//AT3G19480//ATHMT-1//CP24//AT1G12130//AFB3//ANAC002//KCS1//PETE1//AT1G22440//AtSOT1//CYP702A1//AtOPR3//GDCH//AT2G34590//AT2G34460//KCS11//AT2G42220 GO:0009719 response to endogenous stimulus BP 0.00150281833451258 AT2G23270//ATMYB75//ATBCB//AIP2//CBP60G//AT5G61560//RPT3//TCH4//ATWRKY48//AT5G45630//ATRAB-F2A//JAS1//AT5G11650//AT5G06370//AT3G60690//ATPIRIN1//AT3G55430//ARP1//OEC33//MPT2//ATEDS1//APRR2//ARF5//E12A11//AT3G10930//PMZ//AT3G19970//ATMBF1C//VPS60.1//AtRLP30//AT1G43910//AT1G64380//ATBETAFRUCT4//AT1G12130//ANAC002//SCL-3//ATPEPR1//ALDH7B4//AT1G05710//UGT74E2//ENO2//ATNHL10//AT2G21220//AtSOT1//AtOPR3//AT2G27500" GO:0015849 organic acid transport BP 0.00152454744789979 AIP2//AT5G61560//RPT3//ATWRKY48//APE2//ATGLR2.5//ATJRG21//ATWRKY28//ATPAP18//AT1G64380//ANAC001//AT1G21010//ATRNS1 GO:0046942 carboxylic acid transport BP 0.00152454744789979 AIP2//AT5G61560//RPT3//ATWRKY48//APE2//ATGLR2.5//ATJRG21//ATWRKY28//ATPAP18//AT1G64380//ANAC001//AT1G21010//ATRNS1 GO:0030001 metal ion transport BP 0.00167249632664429 ATBCB//ATCNGC1//AGP22//NDH18//ATPIRIN1//OEC33//ATPRR2//ATGSR2//AT3G22910//AT3G22570//PGK1//CP24//ATBETAFRUCT4//AT1G63010//PETE1//CYP705A25//AT1G22440//ATCHX1//PSAD-2//AT1G27480//KCS11 GO:0044272 sulfur compound biosynthetic process BP 0.00168275824325697 ATPPOX//APE2//CaS//ACSF//AT3G54400//OEC33//PSAE-1//LHCB5//PSAD-1//AtDJ1A//PGK1//ATHMT-1//ACLB-1//CP24//AFB3//PETE1//ACLA-3//GDCH//AT2G42220 GO:0010218 response to far red light BP 0.00192888123074763 CaS//LHCB4.1//LHCA1//PSBQ//LHCB5//GAPA//LHCB4.3 GO:0009637 response to blue light BP 0.00224249221056194 CaS//LHCB4.1//ATPIRIN1//LHCA1//PSBQ//LHCB5//GAPA//LHCB4.3 GO:0019344 cysteine biosynthetic process BP 0.00236711499822702 APE2//CaS//ACSF//AT3G54400//PSAE-1//LHCB5//PSAD-1//PGK1//CP24//PETE1//GDCH//AT2G42220 GO:0001101 response to acid chemical BP 0.00239222772223984 ATCYSA//ATMYB75//ATBCB//AIP2//CBP60G//AGP22//DIR1//JAS1//AT3G60690//ATPIRIN1//ARP1//OEC33//ATEDS1//ATPRR2//E12A11//PMZ//AT3G19970//AT3G22570//ATMBF1C//VPS60.1//AtRLP30//AT1G43910//ATBETAFRUCT4//AT1G12130//AFB3//ANAC002//SCL-3//CYP705A25//AT1G22440//ATPEPR1//ALDH7B4//UGT74E2//ENO2//ATNHL10//AtSOT1//AtOPR3//AT2G27500//cdf3//DREB19//AKR4C9//AKR4C8 GO:0006534 cysteine metabolic process BP 0.00248050387496179 APE2//CaS//ACSF//AT3G54400//PSAE-1//LHCB5//PSAD-1//PGK1//CP24//PETE1//GDCH//AT2G42220 GO:1901564 organonitrogen compound metabolic proces... BP 0.00248883524232613 AAT2//ATPPOX//APE2//ATCLH2//AT5G36160//CaS//AT3G57680//ACSF//AT3G54400//AT3G51660//OEC33//PSAE-1//AT4G27700//LHCB5//AT4G02530//PSAD-1//ATGSR2//AT3G22910//AtDJ1A//EDF3//PGK1//AT3G19480//ATHMT-1//ATIPT7//AT3G04000//CP24//ATCSLE1//AFB3//PETE1//ALDH7B4//UGT74E2//FBA6//ENO2//CYP702A1//AtOPR3//ATGSTU1//GDCH//AKR4C8//YCF37//AT2G42220 GO:0055082 cellular chemical homeostasis BP 0.00269127712838063 NDH18//ATGLR2.5//OEC33//ATHXK1//ATGSR2//AT3G22910//PGK1//PETE1//PSAD-2//AT1G27480 GO:0006865 amino acid transport BP 0.00272058287459912 AIP2//AT5G61560//RPT3//ATWRKY48//ATGLR2.5//ATJRG21//ATWRKY28//ATPAP18//AT1G64380//ANAC001//AT1G21010//ATRNS1 GO:1901605 alpha-amino acid metabolic process BP 0.00272445254013199 APE2//AT5G36160//CaS//ACSF//AT3G54400//AT3G51660//PSAE-1//LHCB5//PSAD-1//ATGSR2//PGK1//AT3G19480//ATHMT-1//CP24//AFB3//PETE1//CYP702A1//AtOPR3//GDCH//AT2G42220 GO:0035304 regulation of protein dephosphorylation BP 0.00276366680349481 APE2//OEC33//ATEDS1//PSBQ//PSAD-1//CP24//PETE1//PSAD-2 GO:0010114 response to red light BP 0.00290268657028802 CaS//LHCB4.1//LHCA1//PSBQ//LHCB5//GAPA//LHCB4.3 GO:0016053 organic acid biosynthetic process BP 0.00329642697509715 ATBCB//CBP60G//APE2//AT5G36160//CaS//JAS1//ACSF//AT3G54400//AT3G51660//ATEDS1//PSAE-1//LHCB5//AT4G02530//PSAD-1//ATGSR2//AT3G19970//PGK1//AT3G19480//ATHMT-1//CP24//AT1G12130//AFB3//ANAC002//KCS1//PETE1//AtSOT1//CYP702A1//AtOPR3//GDCH//KCS11//AT2G42220 GO:0046394 carboxylic acid biosynthetic process BP 0.00329642697509715 ATBCB//CBP60G//APE2//AT5G36160//CaS//JAS1//ACSF//AT3G54400//AT3G51660//ATEDS1//PSAE-1//LHCB5//AT4G02530//PSAD-1//ATGSR2//AT3G19970//PGK1//AT3G19480//ATHMT-1//CP24//AT1G12130//AFB3//ANAC002//KCS1//PETE1//AtSOT1//CYP702A1//AtOPR3//GDCH//KCS11//AT2G42220 GO:0009628 response to abiotic stimulus BP 0.00351917219513751 AT2G23270//ATCYSA//ATMYB75//AT5G10695//ATBCB//CBP60G//ATEB1C//TCH4//ATHS83//APE2//CaS//AT5G13200//JAS1//ATGLR2.5//SIS//LHCB4.1//ATPIRIN1//ACSF//LHCA1//ARP1//OEC33//ATCKA2//MPT2//ATEDS1//AT4G25260//PSBQ//LHCB5//AT4G02530//AT3G10930//ATGSR2//PMZ//AT3G19970//PGK1//GAPA//ATMBF1C//AtRLP30//CP24//ATBETAFRUCT4//AT1G63010//AT1G04810//AFB3//ANAC002//KCS1//AT1G14200//ALDH7B4//UGT74E2//FBA6//ENO2//AtSOT1//AtOPR3//LHCB4.3//cdf3//ATGSTF5//GDCH//DREB19//AKR4C9//AKR4C8//AT2G19310//KCS11 GO:0008652 cellular amino acid biosynthetic process BP 0.00356330383109204 APE2//AT5G36160//CaS//ACSF//AT3G54400//PSAE-1//LHCB5//PSAD-1//ATGSR2//PGK1//AT3G19480//ATHMT-1//CP24//AFB3//PETE1//GDCH//AT2G42220 GO:0035303 regulation of dephosphorylation BP 0.0036004462430325 APE2//OEC33//ATEDS1//PSBQ//PSAD-1//CP24//PETE1//PSAD-2 GO:0070887 cellular response to chemical stimulus BP 0.00383940158619319 AT2G23270//ATMYB75//AT5G10695//AIP2//CBP60G//AT5G61560//DIR1//CaS//JAS1//AT5G06370//AT3G60690//ATPIRIN1//OEC33//ATEDS1//ATHXK1//APRR2//PMZ//AT3G19970//AtDJ1A//ATMBF1C//VPS60.1//AtRLP30//ATBETAFRUCT4//AT1G12130//AFB3//ANAC002//ATPEPR1//ALDH7B4//UGT74E2//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0010200 response to chitin BP 0.00405090791025723 CBP60G//AT5G61560//TCH4//ATWRKY48//AT5G45630//ATRAB-F2A//AT5G11650//AT3G55430//ATEDS1//AT3G10930//PMZ//AT3G19970//VPS60.1//AT1G64380//ANAC002//ATNHL10//AtSOT1 GO:0000096 sulfur amino acid metabolic process BP 0.00408926008831026 APE2//CaS//ACSF//AT3G54400//PSAE-1//LHCB5//PSAD-1//PGK1//ATHMT-1//CP24//AFB3//PETE1//GDCH//AT2G42220 GO:0071229 cellular response to acid chemical BP 0.00439981042910384 AIP2//CBP60G//DIR1//JAS1//AT3G60690//ATPIRIN1//OEC33//ATEDS1//PMZ//AT3G19970//VPS60.1//AtRLP30//ATBETAFRUCT4//AT1G12130//AFB3//ANAC002//ATPEPR1//UGT74E2//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0009069 serine family amino acid metabolic proce... BP 0.00444934570670063 APE2//CaS//ACSF//AT3G54400//PSAE-1//LHCB5//PSAD-1//PGK1//AT3G19480//CP24//PETE1//GDCH//AT2G42220 GO:1901698 response to nitrogen compound BP 0.00503370987653289 CBP60G//AT5G61560//TCH4//AGP22//ATWRKY48//AT5G45630//ATRAB-F2A//AT5G11650//ATPIRIN1//AT3G55430//ATEDS1//ATPRR2//AT3G10930//PMZ//AT3G19970//AT3G22570//VPS60.1//AT1G64380//AFB3//ANAC002//CYP705A25//AT1G22440//ATNHL10//AtSOT1 GO:0009644 response to high light intensity BP 0.00521649990235172 ATHS83//LHCB4.1//LHCA1//OEC33//PSBQ//LHCB5//GAPA//ATMBF1C//AT1G14200//AT2G19310 GO:0006950 response to stress BP 0.00527051800318514 AT2G23270//ATCYSA//ATMYB75//AT5G10695//ATBCB//CBP60G//AT5G61560//RPT3//TCH4//AGP22//ATHS83//ATWRKY48//DIR1//AT5G46780//NDH18//ATUBC8//AT5G40060//AT5G18130//AT5G13200//JAS1//SIS//AT3G60690//ATPIRIN1//ARP1//AT3G51660//OEC33//ATCKA2//MPT2//ATEDS1//ATPRR2//AT4G09360//AT4G02530//AT3G10930//ATGSR2//PMZ//AT3G19970//AT3G22570//AtDJ1A//AT3G20340//PGK1//GAPA//ATMBF1C//VPS60.1//AtRLP30//CP24//AT1G67600//ATTI2//ATTI1//AT1G15010//ATBETAFRUCT4//AT1G63010//LCR78//AT1G04810//ANAC002//KCS1//CYP705A25//AT1G22440//ATPEPR1//ATGSTU24//AT1G14200//ALDH7B4//UGT74E2//FBA6//ENO2//ATNHL10//AtSOT1//ATMLO8//AtOPR3//AT2G27500//ATSRP2//cdf3//ATGSTF5//GDCH//ATRNS1//DREB19//AKR4C9//AKR4C8//AT2G19310//AT2G34930//CYP71A12//KCS11 GO:0009867 jasmonic acid mediated signaling pathway BP 0.00562060740744567 CBP60G//JAS1//OEC33//ATEDS1//PMZ//AT3G19970//VPS60.1//AtRLP30//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0071395 cellular response to jasmonic acid stimu... BP 0.00562060740744567 CBP60G//JAS1//OEC33//ATEDS1//PMZ//AT3G19970//VPS60.1//AtRLP30//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0010243 response to organonitrogen compound BP 0.00568209878131483 CBP60G//AT5G61560//TCH4//ATWRKY48//AT5G45630//ATRAB-F2A//AT5G11650//AT3G55430//ATEDS1//AT3G10930//PMZ//AT3G19970//VPS60.1//AT1G64380//ANAC002//ATNHL10//AtSOT1 GO:0009605 response to external stimulus BP 0.00569980838346563 ATMYB75//ATBCB//CBP60G//ATEB1C//AT5G61560//TCH4//AGP22//ATHS83//ATWRKY48//DIR1//AT5G18130//JAS1//AT3G60690//ATPIRIN1//AT3G51660//OEC33//ATEDS1//ATPRR2//AT4G02530//ATWI-12//AT3G10930//AT3G19970//AT3G22910//AT3G22570//PGK1//GAPA//VPS60.1//AtRLP30//AT1G72180//AT1G67600//ATTI1//AT1G15010//ATBETAFRUCT4//AT1G63010//AFB3//ANAC002//CYP705A25//AT1G22440//UGT74E2//ATNHL10//AtSOT1//AtOPR3//ATGSTF5//GDCH//ATRNS1//AT2G34930//CYP71A12 GO:0030003 cellular cation homeostasis BP 0.00576963907243411 NDH18//ATGLR2.5//OEC33//ATGSR2//AT3G22910//PGK1//PETE1//PSAD-2//AT1G27480 GO:0006790 sulfur compound metabolic process BP 0.00589534906908691 ATPPOX//APE2//CaS//ACSF//AT3G54400//OEC33//PSAE-1//LHCB5//PSAD-1//AtDJ1A//PGK1//ATHMT-1//ACLB-1//CP24//AFB3//PETE1//ACLA-3//GDCH//AT2G34590//KCS11//AT2G42220 GO:0017014 protein nitrosylation BP 0.00638203564264 PSBQ//PGK1//GAPA GO:0018119 peptidyl-cysteine S-nitrosylation BP 0.00638203564264 PSBQ//PGK1//GAPA GO:1901701 cellular response to oxygen-containing c... BP 0.00648936288876523 ATMYB75//AIP2//CBP60G//DIR1//JAS1//AT3G60690//ATPIRIN1//OEC33//ATEDS1//ATHXK1//PMZ//AT3G19970//VPS60.1//AtRLP30//ATBETAFRUCT4//AT1G12130//AFB3//ANAC002//ATPEPR1//UGT74E2//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0032870 cellular response to hormone stimulus BP 0.00653501306457462 AIP2//CBP60G//JAS1//AT5G06370//ATPIRIN1//OEC33//ATEDS1//APRR2//PMZ//AT3G19970//ATMBF1C//VPS60.1//AtRLP30//ATBETAFRUCT4//AT1G12130//ANAC002//ATPEPR1//ALDH7B4//UGT74E2//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0071495 cellular response to endogenous stimulus BP 0.00684493235195607 AIP2//CBP60G//JAS1//AT5G06370//ATPIRIN1//OEC33//ATEDS1//APRR2//PMZ//AT3G19970//ATMBF1C//VPS60.1//AtRLP30//ATBETAFRUCT4//AT1G12130//ANAC002//ATPEPR1//ALDH7B4//UGT74E2//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0043436 oxoacid metabolic process BP 0.00693503819259434 AAT2//ATBCB//CBP60G//RPT3//ATPPOX//APE2//NDH18//AT5G36160//CaS//JAS1//AT5G06370//ACSF//AT3G54400//AT3G51660//OEC33//ATEDS1//PSAE-1//LHCB5//AT4G02530//PSAD-1//ATGSR2//AT3G19970//AtDJ1A//PGK1//GAPA//AT3G19480//ATHMT-1//AT3G04000//CP24//ATCSLE1//AT1G12130//AT1G04810//AFB3//ANAC002//KCS1//PETE1//ATGSTU24//UGT74E2//FBA6//ENO2//AtSOT1//CYP702A1//AtOPR3//ATGSTU1//GDCH//AKR4C8//YCF37//KCS11//AT2G42220 GO:0019752 carboxylic acid metabolic process BP 0.00700600618591848 AAT2//ATBCB//CBP60G//RPT3//APE2//NDH18//AT5G36160//CaS//JAS1//AT5G06370//ACSF//AT3G54400//AT3G51660//ATEDS1//PSAE-1//LHCB5//AT4G02530//PSAD-1//ATGSR2//AT3G19970//AtDJ1A//PGK1//GAPA//AT3G19480//ATHMT-1//AT3G04000//CP24//ATCSLE1//AT1G12130//AT1G04810//AFB3//ANAC002//KCS1//PETE1//ATGSTU24//UGT74E2//FBA6//ENO2//AtSOT1//CYP702A1//AtOPR3//ATGSTU1//GDCH//AKR4C8//YCF37//KCS11//AT2G42220 GO:0006082 organic acid metabolic process BP 0.00703404694352276 AAT2//ATBCB//CBP60G//RPT3//ATPPOX//APE2//NDH18//AT5G36160//CaS//JAS1//AT5G06370//ACSF//AT3G54400//AT3G51660//OEC33//ATEDS1//PSAE-1//LHCB5//AT4G02530//PSAD-1//ATGSR2//AT3G19970//AtDJ1A//PGK1//GAPA//AT3G19480//ATHMT-1//AT3G04000//CP24//ATCSLE1//AT1G12130//AT1G04810//AFB3//ANAC002//KCS1//PETE1//ATGSTU24//UGT74E2//FBA6//ENO2//AtSOT1//CYP702A1//AtOPR3//ATGSTU1//GDCH//AKR4C8//YCF37//KCS11//AT2G42220 GO:0006873 cellular ion homeostasis BP 0.00705114801104021 NDH18//ATGLR2.5//OEC33//ATGSR2//AT3G22910//PGK1//PETE1//PSAD-2//AT1G27480 GO:0009725 response to hormone BP 0.00721089462100659 AT2G23270//ATMYB75//ATBCB//AIP2//CBP60G//RPT3//TCH4//JAS1//AT5G06370//AT3G60690//ATPIRIN1//ARP1//OEC33//MPT2//ATEDS1//APRR2//ARF5//E12A11//PMZ//AT3G19970//ATMBF1C//VPS60.1//AtRLP30//AT1G43910//ATBETAFRUCT4//AT1G12130//ANAC002//SCL-3//ATPEPR1//ALDH7B4//AT1G05710//UGT74E2//ENO2//ATNHL10//AT2G21220//AtSOT1//AtOPR3//AT2G27500 GO:0009620 response to fungus BP 0.00826257179342276 ATMYB75//ATBCB//CBP60G//AT5G61560//JAS1//ATEDS1//ATWI-12//AT3G19970//VPS60.1//AtRLP30//ATTI1//AT1G15010//ANAC002//ATNHL10//AtSOT1//AtOPR3//AT2G34930 GO:0071310 cellular response to organic substance BP 0.00856950451257314 ATMYB75//AT5G10695//AIP2//CBP60G//AT5G61560//DIR1//JAS1//AT5G06370//AT3G60690//ATPIRIN1//OEC33//ATEDS1//ATHXK1//APRR2//PMZ//AT3G19970//ATMBF1C//VPS60.1//AtRLP30//ATBETAFRUCT4//AT1G12130//ANAC002//ATPEPR1//ALDH7B4//UGT74E2//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0065007 biological regulation BP 0.00881913099834168 ATMYB75//AT5G10695//AIP2//CBP60G//anac103//AT5G61560//AT5G55520//AGP22//ATWRKY48//DIR1//AT5G46780//APE2//AT5G46010//ATRAB-F2A//NDH18//ATUBC8//AT5G37610//CaS//JAS1//ATGLR2.5//AtRABH1e//AT5G06370//LHCB4.1//AT3G60690//ATPIRIN1//AT3G57680//ACSF//AT3G56290//LHCA1//ARP1//AtCDC48B//AT3G51660//OEC33//ATCKA2//ATEDS1//AT4G39780//ATHXK1//AT4G27700//AT4G22730//PSBQ//ATSBT3.12//ATWRKY28//APRR2//ATPRR2//LHCB5//AT4G02530//PSAD-1//ARF5//E12A11//ATGSR2//PMZ//AT3G19970//AT3G22910//AT3G22570//AT3G19184//AtDJ1A//EDF3//PGK1//GAPA//ANAC059//ATIPT7//ATMBF1C//A/N-InvC//ATWRKY39//VPS60.1//AtRLP30//CP24//anac032//AT1G64380//AT1G72180//ANAC018//AT1G67600//AT1G12130//AT1G04810//AFB3//ARA//ANAC002//ANAC001//PETE1//SCL-3//AT1G22440//ATPEPR1//AtPERK7//PSAD-2//ALDH7B4//UGT74E2//AT2G15320//ATNHL10//AtSOT1//AT1G27480//CYP702A1//AtOPR3//AT2G27500//ATSRP2//GDCH//AT2G34590//DREB19//AT2G34930//EDA28//KCS11 GO:0010207 photosystem II assembly BP 0.0090412424266689 CaS//ACSF//OEC33//PSAE-1//PSBQ//PSAD-1//GAPA//GDCH GO:0018198 peptidyl-cysteine modification BP 0.00917705131592401 PSBQ//PGK1//GAPA GO:0009753 response to jasmonic acid BP 0.00943649864713453 ATMYB75//ATBCB//CBP60G//JAS1//OEC33//ATEDS1//PMZ//AT3G19970//VPS60.1//AtRLP30//ANAC002//ATPEPR1//ATNHL10//AtSOT1//AtOPR3//AT2G27500 GO:0006470 protein dephosphorylation BP 0.00980547129245944 APE2//AT5G06750//OEC33//ATEDS1//PSBQ//PSAD-1//CP24//PETE1//PSAD-2 GO:0051246 regulation of protein metabolic process BP 0.0100935267332017 APE2//AtCDC48B//OEC33//ATEDS1//PSBQ//PSAD-1//CP24//AT1G04810//PETE1//PSAD-2//ATSRP2 GO:0072524 pyridine-containing compound metabolic p... BP 0.0101104540731973 ATPPOX//CaS//OEC33//AT4G27700//AT4G02530//PGK1//FBA6//ENO2//GDCH//YCF37 GO:0009617 response to bacterium BP 0.010449174191502 CBP60G//AT5G61560//ATHS83//ATWRKY48//AT5G18130//OEC33//ATEDS1//AT4G02530//PGK1//GAPA//AT1G72180//ATBETAFRUCT4//AFB3//ATNHL10//AtSOT1//ATGSTF5//GDCH//CYP71A12 GO:0009744 response to sucrose BP 0.0109642068072926 ATMYB75//LHCB4.1//LHCA1//AT3G52480//PSBQ//LHCB5//ATGSR2//PGK1//GAPA//GDCH GO:0009607 response to biotic stimulus BP 0.0110806755072833 ATMYB75//ATBCB//CBP60G//AT5G61560//ATHS83//ATWRKY48//DIR1//AT5G18130//JAS1//AT3G60690//AT3G51660//OEC33//ATEDS1//AT4G02530//ATWI-12//AT3G19970//AT3G22910//PGK1//GAPA//VPS60.1//AtRLP30//AT1G72180//ATTI1//AT1G15010//ATBETAFRUCT4//AFB3//ANAC002//ATNHL10//AtSOT1//AtOPR3//ATGSTF5//GDCH//AT2G34930//CYP71A12 GO:0043207 response to external biotic stimulus BP 0.0110806755072833 ATMYB75//ATBCB//CBP60G//AT5G61560//ATHS83//ATWRKY48//DIR1//AT5G18130//JAS1//AT3G60690//AT3G51660//OEC33//ATEDS1//AT4G02530//ATWI-12//AT3G19970//AT3G22910//PGK1//GAPA//VPS60.1//AtRLP30//AT1G72180//ATTI1//AT1G15010//ATBETAFRUCT4//AFB3//ANAC002//ATNHL10//AtSOT1//AtOPR3//ATGSTF5//GDCH//AT2G34930//CYP71A12 GO:0051707 response to other organism BP 0.0110806755072833 ATMYB75//ATBCB//CBP60G//AT5G61560//ATHS83//ATWRKY48//DIR1//AT5G18130//JAS1//AT3G60690//AT3G51660//OEC33//ATEDS1//AT4G02530//ATWI-12//AT3G19970//AT3G22910//PGK1//GAPA//VPS60.1//AtRLP30//AT1G72180//ATTI1//AT1G15010//ATBETAFRUCT4//AFB3//ANAC002//ATNHL10//AtSOT1//AtOPR3//ATGSTF5//GDCH//AT2G34930//CYP71A12 GO:0010155 regulation of proton transport BP 0.0112698685094909 LHCB4.1//LHCA1//PSBQ//LHCB5//GAPA GO:0034285 response to disaccharide BP 0.0114110891074044 ATMYB75//LHCB4.1//LHCA1//AT3G52480//PSBQ//LHCB5//ATGSR2//PGK1//GAPA//GDCH GO:0042445 hormone metabolic process BP 0.0125343357115912 AGP22//AT3G51660//AT3G22570//EDF3//ATIPT7//AT1G22440//UGT74E2//AtSOT1//CYP702A1//AtOPR3//AT2G34590//KCS11 GO:0044802 single-organism membrane organization BP 0.0130681178512691 AT5G10695//CBP60G//AT5G46780//NDH18//ACSF//OEC33//ATEDS1//AT4G02530//PMZ//AT3G19970//PGK1//VPS60.1//AtRLP30//ATNHL10//AtSOT1//AT2G27500//cdf3//YCF37