GOID TERM ONTOLOGY pValue Genes GO:0009416 response to light stimulus BP 0.00104447524736191 ATDCL4//ATCOL1//AT5G47800//AT5G14080//ABC1//AtHEMA1//iqd9//UVR3//SPPA//AT1G50280//GASA1//NF-YA5//AT1G03010//RUS2//ATGLR3.4//PKS1 GO:0007623 circadian rhythm BP 0.00116160859697723 ATCOL1//AT3G56480//ATFIM1//APRR8//ATWNK1//STN7 GO:0048511 rhythmic process BP 0.00116160859697723 ATCOL1//AT3G56480//ATFIM1//APRR8//ATWNK1//STN7 GO:0009314 response to radiation BP 0.00184686470652463 ATDCL4//ATCOL1//AT5G47800//AT5G14080//ABC1//AtHEMA1//iqd9//UVR3//SPPA//AT1G50280//GASA1//NF-YA5//AT1G03010//RUS2//ATGLR3.4//PKS1 GO:2000030 regulation of response to red or far red... BP 0.00975384713905155 ATCOL1//ABC1 GO:0016226 iron-sulfur cluster assembly BP 0.0141000809325413 TCP5//OVA6//MEE40//ABC1 GO:0031163 metallo-sulfur cluster assembly BP 0.0141000809325413 TCP5//OVA6//MEE40//ABC1 GO:0055072 iron ion homeostasis BP 0.0142722160338982 ABC1//AtHEMA1 GO:0006555 methionine metabolic process BP 0.0146591481124372 CBL//ARAC3//iqd9//ANAC014 GO:0009086 methionine biosynthetic process BP 0.0146591481124372 CBL//ARAC3//iqd9//ANAC014 GO:0014070 response to organic cyclic compound BP 0.0155946658901878 ATDCL4//TCP5//mtACP3//ATGSTT1//ATMYB48//ARF11//AT1G49010//ATRDRP1//GASA1 GO:0009628 response to abiotic stimulus BP 0.019142753528984 ATDCL4//ATCOL1//AT5G47800//AT5G14080//ABCG22//cpHsc70-1//ABC1//AtHEMA1//iqd9//UVR3//ERD10//SPPA//AT1G49010//AT1G50280//GASA1//NF-YA5//AT1G03010//AT2G16365//AT2G22360//RUS2//ATGLR3.4//PKS1 GO:0010050 vegetative phase change BP 0.0216812845911899 ATDCL4//FTM6//ANAC014 GO:0009067 aspartate family amino acid biosynthetic... BP 0.0232238847823937 CBL//ARAC3//iqd9//ANAC014 GO:0010109 regulation of photosynthesis BP 0.0234052424652582 OVA6//STN7 GO:0048527 lateral root development BP 0.0260476496186614 JKD//ARF11//WIP3 GO:0055065 metal ion homeostasis BP 0.0260476496186614 ABC1//AtHEMA1//ATGLR3.4 GO:0071310 cellular response to organic substance BP 0.0277264919527851 ATDCL4//ATBZIP9//TCP5//mtACP3//APRR8//PYL9//AT1G17350//ATRDRP1//NF-YA5//ATGLR3.4 GO:0000394 RNA splicing, via endonucleolytic cleava... BP 0.0288724240113312 CBL//ARAC3//iqd9//ANAC014 GO:0009066 aspartate family amino acid metabolic pr... BP 0.0288724240113312 CBL//ARAC3//iqd9//ANAC014 GO:0007020 microtubule nucleation BP 0.0296091400827105 AT1G74800//IQD31//ATMAP65-6 GO:0010039 response to iron ion BP 0.0297648072181879 ABC1//AtHEMA1 GO:0035670 plant-type ovary development BP 0.0306236059396217 TCP5//OVA6//MEE40//cpHsc70-1 GO:0048481 ovule development BP 0.0306236059396217 TCP5//OVA6//MEE40//cpHsc70-1 GO:0048528 post-embryonic root development BP 0.0334150643195441 JKD//ARF11//WIP3 GO:0071495 cellular response to endogenous stimulus BP 0.033523301927098 TCP5//APRR8//PYL9//AT1G17350//ATRDRP1//NF-YA5//ATGLR3.4 GO:0046785 microtubule polymerization BP 0.034737701289406 AT1G74800//IQD31//ATMAP65-6 GO:0098771 inorganic ion homeostasis BP 0.0360871923769363 ABC1//AtHEMA1//ATGLR3.4 GO:1901701 cellular response to oxygen-containing c... BP 0.036935579081977 ATDCL4//ATBZIP9//TCP5//PYL9//ATRDRP1//NF-YA5//ATGLR3.4 GO:0031109 microtubule polymerization or depolymeri... BP 0.038866336325062 AT1G74800//IQD31//ATMAP65-6 GO:1901700 response to oxygen-containing compound BP 0.039807723356581 ATDCL4//ATBZIP9//TCP5//ABCG22//ATMYB48//ABC1//ARF11//AtHEMA1//ERD10//AT1G49010//PYL9//ATRDRP1//GASA1//NF-YA5//ATGLR3.4 GO:0008380 RNA splicing BP 0.0398752669097938 ATDCL4//CBL//ARAC3//iqd9//ANAC014 GO:0035556 intracellular signal transduction BP 0.0439439517178963 TCP5//ARAC3//APRR8//AT1G44050//ATRDRP1//ATGLR3.4 GO:0010228 vegetative to reproductive phase transit... BP 0.044698057479615 ATDCL4//TCP5//OVA6//AT5G14080//MEE40//iqd9 GO:0009615 response to virus BP 0.0468666220785227 ATDCL4//mtACP3//ANAC014//ATRDRP1 GO:0070887 cellular response to chemical stimulus BP 0.0486441092045169 ATDCL4//ATBZIP9//TCP5//mtACP3//APRR8//PYL9//AT1G17350//ATRDRP1//NF-YA5//ATGLR3.4 GO:0055076 transition metal ion homeostasis BP 0.0495466091745013 ABC1//AtHEMA1 GO:0030029 actin filament-based process BP 0.0503561043387583 ARAC3//ATFIM1//ARF11//PLIM2a GO:0007015 actin filament organization BP 0.056019841336806 ARAC3//ARF11//PLIM2a GO:0044272 sulfur compound biosynthetic process BP 0.0562011040637035 ATCAO//CBL//AT3G45160//ARAC3//AOP//iqd9//ANAC014//AT2G42320 GO:0000097 sulfur amino acid biosynthetic process BP 0.0587692947793905 ATCAO//CBL//ARAC3//iqd9//ANAC014//AT2G42320 GO:0051258 protein polymerization BP 0.0590402106305011 ARF11//AT1G74800//IQD31//ATMAP65-6 GO:0071214 cellular response to abiotic stimulus BP 0.0594684431957169 NF-YA5//ATGLR3.4//PKS1 GO:0006875 cellular metal ion homeostasis BP 0.0607879391316205 ABC1//ATGLR3.4 GO:0009751 response to salicylic acid BP 0.0616597063882546 TCP5//ATMYB48//AT1G49010//ATRDRP1 GO:0006457 protein folding BP 0.0643401276409434 AT2G47440//cpHsc70-1//AT2G22360//AT2G33735 GO:0006790 sulfur compound metabolic process BP 0.0652590447637082 ATCAO//CBL//AT3G45160//ARAC3//AOP//iqd9//ANAC014//IQD31//AT2G42320 GO:0001101 response to acid chemical BP 0.0665128289606219 TCP5//ABCG22//ATMYB48//ERD10//AT1G49010//PYL9//ATRDRP1//GASA1//NF-YA5//ATGLR3.4 GO:0050896 response to stimulus BP 0.0675172997657653 ATDCL4//ATCOL1//ATBZIP9//TCP5//mtACP3//AT5G47800//AT5G47250//ATGSTT1//AT5G14080//ABCG22//ATMYB48//AT4G37560//ARAC3//cpHsc70-1//ABC1//APRR8//ARF11//AtHEMA1//iqd9//UVR3//AT1G44050//ERD10//SRF6//SPPA//AT1G49010//PYL9//AT1G17350//ANAC014//AT1G50280//ATRDRP1//GASA1//NF-YA5//AT1G03010//AT2G16365//AT2G22360//RUS2//ATGLR3.4//PKS1 GO:0009755 hormone-mediated signaling pathway BP 0.0731713245791 TCP5//APRR8//PYL9//AT1G17350//ATRDRP1//NF-YA5 GO:0071229 cellular response to acid chemical BP 0.0732451795551268 TCP5//PYL9//ATRDRP1//NF-YA5//ATGLR3.4 GO:0030036 actin cytoskeleton organization BP 0.0781483150055751 ARAC3//ARF11//PLIM2a GO:0006355 regulation of transcription, DNA-templat... BP 0.0784659154911454 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:1903506 regulation of nucleic acid-templated tra... BP 0.0784659154911454 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:2001141 regulation of RNA biosynthetic process BP 0.0784659154911454 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0051252 regulation of RNA metabolic process BP 0.0800438400584464 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0048878 chemical homeostasis BP 0.0801535646704038 ATBZIP9//ABC1//AtHEMA1//ATGLR3.4 GO:0065007 biological regulation BP 0.08131505002441 ATCAO//ATDCL4//ATCOL1//ATBZIP9//TCP5//OVA6//mtACP3//JKD//ATMYB48//AT4G37560//ARAC3//ABC1//APRR8//ARF11//AtHEMA1//ATING1//AT3G23690//AT3G10760//AT1G44050//ERD10//SRF6//STN7//PYL9//AT1G17350//FTM6//AT1G07700//ANAC014//IQD31//ATRDRP1//GASA1//NF-YA5//AT2G16365//RUS2//ATGLR3.4//AtIDD5//PKS1//CYCP4;1 GO:0000096 sulfur amino acid metabolic process BP 0.08161562871147 ATCAO//CBL//ARAC3//iqd9//ANAC014//AT2G42320 GO:0048440 carpel development BP 0.0816793923351295 TCP5//OVA6//MEE40//cpHsc70-1 GO:0050789 regulation of biological process BP 0.0833237679114656 ATCAO//ATDCL4//ATCOL1//ATBZIP9//TCP5//OVA6//mtACP3//JKD//ATMYB48//AT4G37560//ARAC3//ABC1//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//AT1G44050//ERD10//SRF6//STN7//PYL9//AT1G17350//FTM6//AT1G07700//ANAC014//IQD31//ATRDRP1//NF-YA5//AT2G16365//ATGLR3.4//AtIDD5//PKS1//CYCP4;1 GO:0032870 cellular response to hormone stimulus BP 0.0849182654404187 TCP5//APRR8//PYL9//AT1G17350//ATRDRP1//NF-YA5 GO:0009738 abscisic acid-activated signaling pathwa... BP 0.0887889152048278 PYL9//NF-YA5 GO:0007010 cytoskeleton organization BP 0.0929105204217611 ARAC3//ARF11//AT1G74800//IQD31//ATMAP65-6//PLIM2a GO:0048467 gynoecium development BP 0.0943988108235658 TCP5//OVA6//MEE40//cpHsc70-1 GO:0007165 signal transduction BP 0.0952891425289788 ATDCL4//TCP5//ARAC3//APRR8//AT1G44050//SRF6//PYL9//AT1G17350//ATRDRP1//NF-YA5//ATGLR3.4//PKS1 GO:1990267 response to transition metal nanoparticl... BP 0.0954496153422951 ABC1//AtHEMA1 GO:0009736 cytokinin-activated signaling pathway BP 0.102248943543238 APRR8//AT1G17350 GO:0071215 cellular response to abscisic acid stimu... BP 0.102248943543238 PYL9//NF-YA5 GO:0071478 cellular response to radiation BP 0.102248943543238 NF-YA5//PKS1 GO:0071482 cellular response to light stimulus BP 0.102248943543238 NF-YA5//PKS1 GO:0007602 phototransduction BP 0.103442794745386 745_ GO:0009585 red, far-red light phototransduction BP 0.103442794745386 745_ GO:0071483 cellular response to blue light BP 0.103442794745386 158_ GO:0009719 response to endogenous stimulus BP 0.104930942096169 TCP5//APRR8//ARF11//ERD10//AT1G49010//PYL9//AT1G17350//ATRDRP1//GASA1//NF-YA5//ATGLR3.4 GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 0.105697783742788 AT1G07700//AT2G45990 GO:0032958 inositol phosphate biosynthetic process BP 0.105697783742788 AT1G07700//AT2G45990 GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 0.105697783742788 AT1G07700//AT2G45990 GO:0071368 cellular response to cytokinin stimulus BP 0.105697783742788 APRR8//AT1G17350 GO:0048583 regulation of response to stimulus BP 0.107708327410703 ATCOL1//TCP5//AT4G37560//ABC1//ATRDRP1 GO:0022607 cellular component assembly BP 0.108290158911688 TCP5//OVA6//MEE40//ABC1//ARF11//AT1G74800//IQD31//ATMAP65-6//AT2G45990//PLIM2a GO:0010556 regulation of macromolecule biosynthetic... BP 0.108854457720139 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:2000112 regulation of cellular macromolecule bio... BP 0.108854457720139 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0044763 single-organism cellular process BP 0.109726002751784 ATCAO//ATSPS1F//ATDCL4//ATCOL1//ATBZIP9//TCP5//AT5G58980//OVA6//mtACP3//AT5G45950//ATGSTT1//JKD//CBL//MEE40//AT3G45160//DAW1//ARAC3//ATFIM1//ABC1//hemf2//AOP//APRR8//ARF11//AtHEMA1//iqd9//UVR3//AT1G44050//SRF6//STN7//AT1G69630//PYL9//AT1G17350//AT1G07700//ANAC014//AT1G11410//AT1G74800//IQD31//DGAT3//ATRDRP1//GASA1//NF-YA5//AT1G03010//ATMAP65-6//ATGLR3.4//AT2G42320//AtIDD5//PKS1//CYCP4;1//AT2G45990//PLIM2a//AT2G45720 GO:0055082 cellular chemical homeostasis BP 0.110283552219583 ATBZIP9//ABC1//ATGLR3.4 GO:0006351 transcription, DNA-templated BP 0.110719442033589 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//NRPE5//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0097659 nucleic acid-templated transcription BP 0.110719442033589 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//NRPE5//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0010468 regulation of gene expression BP 0.111354136792612 ATCAO//ATDCL4//ATBZIP9//TCP5//mtACP3//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0032774 RNA biosynthetic process BP 0.111991123106919 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//NRPE5//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0019219 regulation of nucleobase-containing comp... BP 0.112119892594389 ATCAO//ATDCL4//ATBZIP9//TCP5//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0005985 sucrose metabolic process BP 0.113184927160649 076_ GO:0009583 detection of light stimulus BP 0.113184927160649 745_ GO:0009638 phototropism BP 0.113184927160649 745_ GO:0070417 cellular response to cold BP 0.113184927160649 587_ GO:0006778 porphyrin-containing compound metabolic ... BP 0.113318840986211 ATCAO//hemf2//AtHEMA1//STN7 GO:0009627 systemic acquired resistance BP 0.114904443265776 TCP5//AT4G37560//ATRDRP1 GO:0033013 tetrapyrrole metabolic process BP 0.115117365047094 ATCAO//hemf2//AtHEMA1//STN7 GO:0050794 regulation of cellular process BP 0.117232125579744 ATCAO//ATDCL4//ATBZIP9//TCP5//OVA6//JKD//ATMYB48//ARAC3//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//AT1G44050//SRF6//STN7//PYL9//AT1G17350//FTM6//AT1G07700//ANAC014//ATRDRP1//NF-YA5//AT2G16365//ATGLR3.4//AtIDD5//PKS1//CYCP4;1 GO:0031323 regulation of cellular metabolic process BP 0.117856488288019 ATCAO//ATDCL4//ATBZIP9//TCP5//OVA6//JKD//ATMYB48//APRR8//ARF11//ATING1//AT3G23690//AT3G10760//STN7//FTM6//ANAC014//ATRDRP1//NF-YA5//AT2G16365//AtIDD5 GO:0010583 response to cyclopentenone BP 0.119795798209029 ATGSTT1//ARF11