GOID	TERM	ONTOLOGY	pValue	Genes
GO:0042023	DNA endoreduplication	BP	0.000542852956540858	CYCA1//UBC30//ATDPB//CYCD5;1//CCS52A1//CCS52A2//MEE34//ATMMS21//RRG//SAMBA//RPN12a//UBC28
GO:0044786	cell cycle DNA replication	BP	0.000542852956540858	CYCA1//UBC30//ATDPB//CYCD5;1//CCS52A1//CCS52A2//MEE34//ATMMS21//RRG//SAMBA//RPN12a//UBC28
GO:0006301	postreplication repair	BP	0.00220699251758276	POLH//UBC28//ATREV3//AT2G18600//ATPCNA2//AT2G19790//ATMAK3
GO:0006952	defense response	BP	0.0022649595591536	ACX1//ATERF6//CLPR4//RPP4//BAL//RPP5//AtSRT2//ACD2//AT5G27950//ATPSK5//TGA1//EMB2728//ROC7//AT5G58120//ATMEMB12//AT5G49500//AT5G46510//AT5G46520//DELTA-OAT//AT5G46270//AT5G46420//AT5G45500//LCR77//AT5G43740//AT5G40910//AtRLP54//AT5G35450//ATIRE1-1//CHS3//HCEF1//ATCHITIV//CYP94B3//CRK4//AT3G44630//AT3G44400//AT3G43250//PBA1//SGT1A//AT4G23680//AtRLP47//ATWRKY19//ATHCHIB//AT1G69550//ATMKP2//CXC750//ATHMG//AT3G26450//ESM1//AtRLP41//AtRLP42//PDF1.2b//AT3G28940//MOS4//TCTP//RPM1//ALPHA-DOX1//AT3G08980//AT1G15890//MLP165//AT1G67865//AT1G63350//AIG1//WIN1//AT1G63880//CER8//AT2G43530//AT2G43535//RPS5//ANAC014//GAD2//AT1G72840//AT1G72920//UGT74B1//AT1G23130//ATDABB1//ACX5//AtDBP1//AtRLP19//HY3//AT2G46220//ATMAK3
GO:0032875	regulation of DNA endoreduplication	BP	0.00409544788322909	CCS52A1//CCS52A2//ATMMS21//RRG//SAMBA
GO:0001558	regulation of cell growth	BP	0.00433968097624208	CYCA1//UBC30//CCS52A1//CCS52A2//MEE34//TCTP//SAMBA//RPN12a//ATCDPK2//UBC28//ORS1
GO:0009555	pollen development	BP	0.0053752612162787	ACX1//ATSPS2F//CYCA1//ATHDH//ATPRD2//AtNMNAT//ATGPT1//AtUGP2//CYP94B3//ATWRKY19//MAPKKK10//AtTLP6//SAMBA//ATSERK2//MGP1//LAP6//EDA2//ACX5//AGL30
GO:0090329	regulation of DNA-dependent DNA replicat...	BP	0.00611954537644935	CCS52A1//CCS52A2//ATMMS21//RRG//SAMBA
GO:0019395	fatty acid oxidation	BP	0.00995042624178051	ACX1//DELTA-OAT//AT5G22820//UGT76E12//SHL1//PBA1//MEE34//bHLH121//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0034440	lipid oxidation	BP	0.0102967926818753	ACX1//DELTA-OAT//AT5G22820//UGT76E12//SHL1//PBA1//ATSMO1-1//MEE34//bHLH121//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0022604	regulation of cell morphogenesis	BP	0.0109712490967233	CYCA1//UBC30//ATFTA//CCS52A1//CCS52A2//MEE34//SAMBA//RPN12a//ATCDPK2//UBC28
GO:0051716	cellular response to stimulus	BP	0.0110113636039684	ACX1//ATERF6//APS3//RPP4//BAL//RPP5//PHYD//ATMKK9//AT1G32220//ACD2//AT5G27950//ATKO1//CRY3//ATPSK5//TGA1//AT5G63190//AT5G61530//AtRABA1f//ROC7//AT5G58120//AtTEX1//AT5G55620//AtPSKR2//AT5G53900//AT5G49500//AT5G46510//AT5G46520//DELTA-OAT//AT5G46270//AT5G46420//SUV2//POLH//AT5G40910//ATCLC-A//AtRLP54//BGLU42//ATIRE1-1//AT5G05600//ABCB29//AT5G02370//ATFTA//ATCHITIV//AT3G53390//DIN11//AT3G48210//AT3G48425//ARA-3//AT3G46370//AT3G44630//AT3G44400//PBA1//SIC//SGT1A//AT4G23050//CCS52A1//AT4G18593//AtRLP47//ATWRKY19//CCS52A2//AT4G02850//AT4G01910//AT4G01920//AFP3//AT1G34110//ATHCHIB//AT1G69480//AT1G69550//ATMKP2//ELO1//FEI1//ATHMG//ARLIM15//ATMMS21//TMKL1//AtRLP41//AtRLP42//AtRLP43//ATGL1//PDF1.2b//ATRLP40//MOS4//AT3G15410//TCTP//RPM1//ALPHA-DOX1//CDC48C//AT3G08980//AT1G12400//AT1G35350//ATRECQ4B//SRF6//AIG1//AT1G63880//CER8//AOX1D//RPS5//AtRLP4//HSL1//GAD2//ATCDPK2//UBC28//AT1G72840//AT1G72920//AT1G11240//AtRLP2//ATSERK2//CuAO1//AT1G13230//GAI//ATKS//AtOCT5//AT1G75560//ATMPK7//ATPAP1//ATCOL3//AT-PHH1//AT2G21830//ATREV3//AT1G12010//PAP3//ATGLR3.4//LPR1//UGT74B1//GES//ALB4//AT1G61620//BRL2//AtRLP19//AT2G18600//NAP1;2//HY3//AT2G29500//ATPCNA2//AT2G27060//AT2G19790//ATMAK3//AT2G34810
GO:0006260	DNA replication	BP	0.0123502181052319	CYCA1;1//CYCA1//UBC30//ATRPA70C//POLH//ATDPB//AT5G02370//CYCD5;1//CCS52A1//CCS52A2//MEE34//ATMMS21//EMB2811//ATRECQ4B//RRG//SAMBA//RPN12a//UBC28//ATREV3//ATPCNA2
GO:0030258	lipid modification	BP	0.0127459536688971	ACX1//AT4G16710//AT5G63990//DELTA-OAT//AT5G22820//UGT76E12//SHL1//PBA1//ATSMO1-1//MEE34//bHLH121//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0048236	plant-type spore development	BP	0.0136133882506253	CYCA1//ATPRD2//ATWRKY19//MAPKKK10//SAMBA//ATSERK2
GO:0006635	fatty acid beta-oxidation	BP	0.0140668339183953	ACX1//DELTA-OAT//AT5G22820//UGT76E12//SHL1//PBA1//MEE34//bHLH121//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0006875	cellular metal ion homeostasis	BP	0.0142745657472578	ATKCO1//ATCHX20//AtTMN7//PGM2//ATNRAMP6//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0051510	regulation of unidimensional cell growth	BP	0.0142745657472578	CYCA1//UBC30//CCS52A1//CCS52A2//MEE34//SAMBA//RPN12a//ATCDPK2//UBC28
GO:0009062	fatty acid catabolic process	BP	0.014716753368444	ACX1//ATECI3//DELTA-OAT//AT5G22820//UGT76E12//SHL1//PBA1//MEE34//bHLH121//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0016054	organic acid catabolic process	BP	0.0150132752560033	ACX1//ATECI3//ATMKK9//DELTA-OAT//ETFBETA//AT5G22820//UGT76E12//ATIVD//SHL1//PBA1//AT4G20930//AT4G12060//AT5G34930//MEE34//bHLH121//AT3G28940//THA2//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//MCCA//UGT74B1//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0046395	carboxylic acid catabolic process	BP	0.0150132752560033	ACX1//ATECI3//ATMKK9//DELTA-OAT//ETFBETA//AT5G22820//UGT76E12//ATIVD//SHL1//PBA1//AT4G20930//AT4G12060//AT5G34930//MEE34//bHLH121//AT3G28940//THA2//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//MCCA//UGT74B1//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0030148	sphingolipid biosynthetic process	BP	0.0161721895106828	PUT2//PUT1//TSC10B//ATSMO1-1//AT3G06470
GO:0071365	cellular response to auxin stimulus	BP	0.0171908914031393	AT5G63190//ABCB29//SGT1A//ELO1//TCTP//BRL2
GO:0072329	monocarboxylic acid catabolic process	BP	0.0205118231866739	ACX1//ATECI3//DELTA-OAT//AT5G22820//UGT76E12//SHL1//PBA1//MEE34//bHLH121//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0006874	cellular calcium ion homeostasis	BP	0.0210883344269776	PGM2//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0009292	genetic transfer	BP	0.0210883344269776	ATHD2A//ATCNGC9//SDG22//ATHAC1//NAP1;2
GO:0009294	DNA mediated transformation	BP	0.0210883344269776	ATHD2A//ATCNGC9//SDG22//ATHAC1//NAP1;2
GO:0019321	pentose metabolic process	BP	0.0213648858398726	POLH//AT3G59480//ATUXS1//ARA-3//AT1G17160//XK-1
GO:0046520	sphingoid biosynthetic process	BP	0.0246312716628694	PUT2//PUT1//ATSMO1-1//AT3G06470
GO:0022603	regulation of anatomical structure morph...	BP	0.0280512173368053	CYCA1//UBC30//ATFTA//CCS52A1//CCS52A2//BCD1//MEE34//SAMBA//RPN12a//ATCDPK2//UBC28
GO:0098771	inorganic ion homeostasis	BP	0.0281775855960553	ATKCO1//ATCHX20//GDPDL1//BCD1//AtTMN7//PGM2//ATNRAMP6//ATCHX16//AT-PHH1//ATGLR3.4//ATGLR2//AtG3Pp5//HY3
GO:0007165	signal transduction	BP	0.0297183782501441	ACX1//ATERF6//RPP4//BAL//RPP5//PHYD//ATMKK9//ATKO1//TGA1//AT5G63190//AT5G61530//AtRABA1f//AT5G58120//AtPSKR2//AT5G53900//AT5G46510//AT5G46520//AT5G46270//AT5G40910//AtRLP54//ATIRE1-1//AT5G05600//ABCB29//ATFTA//AT3G53390//ARA-3//AT3G46370//AT3G44630//AT3G44400//AT4G23050//CCS52A1//AT4G18593//AtRLP47//ATWRKY19//CCS52A2//AT4G02850//AT4G01910//AT4G01920//AFP3//AT1G34110//ATHCHIB//AT1G69550//ATMKP2//ELO1//FEI1//ATMMS21//TMKL1//AtRLP41//AtRLP42//AtRLP43//ATGL1//PDF1.2b//ATRLP40//MOS4//AT3G15410//TCTP//SRF6//AIG1//AT1G63880//AOX1D//AtRLP4//HSL1//ATCDPK2//AT1G72840//AT1G72920//AtRLP2//ATSERK2//CuAO1//AT1G13230//GAI//ATKS//ATMPK7//ATCOL3//AT2G21830//PAP3//ATGLR3.4//GES//ALB4//AT1G61620//BRL2//AtRLP19//HY3//AT2G27060//AT2G34810
GO:0044242	cellular lipid catabolic process	BP	0.0297300367294484	ACX1//ATECI3//DELTA-OAT//AT5G22820//ATCCD1//UGT76E12//SHL1//PBA1//MEE34//bHLH121//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0072503	cellular divalent inorganic cation homeo...	BP	0.0316490066536444	AtTMN7//PGM2//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0044282	small molecule catabolic process	BP	0.0325205020012315	ACX1//ATECI3//ATMKK9//GRXC1//DELTA-OAT//ETFBETA//AT5G22820//UGT76E12//ATIVD//AT3G43220//SHL1//PBA1//AT4G20930//AT4G12060//AT5G34930//MEE34//bHLH121//AT3G28940//THA2//ALPHA-DOX1//AT1G77770//SEH1H//AML5//AT1G63770//ATECH2//RPN12a//UBC28//MCCA//UGT74B1//ACR3//AT1G23780//AT2G16710//ACX5//AT2G26230//ATPEX16
GO:0010208	pollen wall assembly	BP	0.0328587055679449	ATSPS2F//LAP6//EDA2//AGL30
GO:0010927	cellular component assembly involved in ...	BP	0.0328587055679449	ATSPS2F//LAP6//EDA2//AGL30
GO:0046519	sphingoid metabolic process	BP	0.0328587055679449	PUT2//PUT1//ATSMO1-1//AT3G06470
GO:0085029	extracellular matrix assembly	BP	0.0328587055679449	ATSPS2F//LAP6//EDA2//AGL30
GO:0009734	auxin-activated signaling pathway	BP	0.0336013142241319	AT5G63190//ABCB29//ELO1//TCTP//BRL2
GO:0016042	lipid catabolic process	BP	0.0365761483078083	ACX1//ATECI3//DELTA-OAT//AT5G22820//ATCCD1//UGT76E12//SHL1//PBA1//MEE34//bHLH121//ALPHA-DOX1//AT1G77770//SEH1H//AML5//ATECH2//RPN12a//UBC28//AT1G23780//ACX5//AT2G26230//ATPEX16
GO:0009556	microsporogenesis	BP	0.0412717118536172	CYCA1//ATWRKY19//MAPKKK10//SAMBA//ATSERK2
GO:0055074	calcium ion homeostasis	BP	0.0412717118536172	PGM2//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0015824	proline transport	BP	0.0454598089850935	ATPSK5//DVL18//AT5G59480//AT5G39090//AT3G59630//ATCHITIV//AtOCT5
GO:0051302	regulation of cell division	BP	0.0454598089850935	ATDPB//CCS52A1//CCS52A2//AML5//RRG//SAMBA//ORS1
GO:0043161	proteasome-mediated ubiquitin-dependent ...	BP	0.0487034935465918	CYCA1//AT5G63990//UBC30//PBA1//CCS52A1//CCS52A2//MEE34//AT1G77770//SEH1H//ATECH2//RPN12a//UBC28
GO:0007129	synapsis	BP	0.0523273792000419	ATPRD2//AT3G48210//ARLIM15//HEI10//AT1G11240//AT2G14800
GO:0045143	homologous chromosome segregation	BP	0.0523273792000419	ATPRD2//AT3G48210//ARLIM15//HEI10//AT1G11240//AT2G14800
GO:0070192	chromosome organization involved in meio...	BP	0.0523273792000419	ATPRD2//AT3G48210//ARLIM15//HEI10//AT1G11240//AT2G14800
GO:0006873	cellular ion homeostasis	BP	0.0531154388620005	ATKCO1//NDH18//ATCLC-A//AT5G02160//HCEF1//ATCHX20//GDPDL1//AtTMN7//PGM2//ATNRAMP6//GAD2//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0009816	defense response to bacterium, incompati...	BP	0.0535610199912047	BAL//DELTA-OAT//ATIRE1-1//RPS5
GO:0030198	extracellular matrix organization	BP	0.0535610199912047	ATSPS2F//LAP6//EDA2//AGL30
GO:0043062	extracellular structure organization	BP	0.0535610199912047	ATSPS2F//LAP6//EDA2//AGL30
GO:0010564	regulation of cell cycle process	BP	0.0541215802863801	CYCA1;1//AT5G02370//CCS52A1//CCS52A2//MEE34//ATMMS21//AML5//RRG//SAMBA
GO:0015804	neutral amino acid transport	BP	0.0594833228617837	ATPSK5//DVL18//AT5G59480//AT5G39090//AT3G59630//ATCHITIV//AtOCT5
GO:0019725	cellular homeostasis	BP	0.0600454021659428	AT4G15680//AT4G15660//GRXC1//ATKCO1//NDH18//ATCLC-A//AT5G02160//HCEF1//ATCHX20//GDPDL1//AtTMN7//ATPDI3//PGM2//ATCDSP32//ATNRAMP6//GAD2//ATPDI8//AT1G03020//AT-PHH1//ATGLR3.4//APR2//ATGLR2//HY3
GO:0006665	sphingolipid metabolic process	BP	0.0606903316768372	PUT2//PUT1//TSC10B//ATSMO1-1//AT3G06470//EMB2756
GO:0044764	multi-organism cellular process	BP	0.0606903316768372	ATHD2A//ATCNGC9//SDG22//AT3G25470//ATHAC1//NAP1;2
GO:0042592	homeostatic process	BP	0.0612100152337819	AT4G15680//AT4G15660//GRXC1//ATKCO1//NDH18//ATCLC-A//ATBP-1//AT5G02160//HCEF1//ATCHX20//AT3G48210//ATCTC1//GDPDL1//BCD1//MDO1//AtTMN7//ATMMS21//TCTP//ATPDI3//PGM2//ATCDSP32//ATNRAMP6//GAD2//ATPDI8//ATCHX16//AT1G03020//AT-PHH1//ATGLR3.4//APR2//ATGLR2//AtG3Pp5//HY3
GO:0055114	oxidation-reduction process	BP	0.0638338587606097	ACX1//PDE226//AT4G16770//AT5G21060//AAO1//AT5G20080//AT5G28050//ATKO1//CYP81G1//FRO1//ATHDH//ATFLS2//AT5G61510//DELTA-OAT//AT5G44410//AT5G42250//AT5G22820//ATMSRA3//AT5G05600//AT3G59480//HCEF1//DIN11//CYP94B3//PHS1//UGT76E12//ATIVD//AT3G44970//SHL1//CLB6//ALDH3//PBA1//CYP709B3//AT4G20840//AT4G20930//ATSMO1-1//ATGPX6//AT4G01910//AT4G01920//AT4G01740//AT5G34930//MEE34//AT3G14160//CYP705A21//CYP71B26//bHLH121//AOX1C//ALPHA-DOX1//AT3G03890//NDF5//AT1G77770//SEH1H//AML5//GLYR2//AOX1D//AT1G12160//3BETAHSD/D1//ATECH2//RPN12a//AT2G01090//AT1G64190//UBC28//AT1G06640//CuAO1//AT2G21830//AT1G12010//APR2//LPR1//FMO//ALDH2B//AT1G23780//AT2G28460//ACX5//SDR2//AT2G12190//AT2G26230//AT2G34810//ATPEX16
GO:0001676	long-chain fatty acid metabolic process	BP	0.066023963484712	ACX1//CER8//ACX5//ATMAK3
GO:0009081	branched-chain amino acid metabolic proc...	BP	0.066023963484712	ETFBETA//ATIVD//AT4G20930//MCCA
GO:0007167	enzyme linked receptor protein signaling...	BP	0.0667386641036014	AtPSKR2//AT3G46370//AT1G34110//FEI1//TMKL1//SRF6//HSL1//BRL2//AT2G27060
GO:0007169	transmembrane receptor protein tyrosine ...	BP	0.0667386641036014	AtPSKR2//AT3G46370//AT1G34110//FEI1//TMKL1//SRF6//HSL1//BRL2//AT2G27060
GO:0042214	terpene metabolic process	BP	0.0682353364283845	PDE226//ATKO1//ATCCD1
GO:0023052	signaling	BP	0.070248686990553	ACX1//ATERF6//RPP4//BAL//RPP5//PHYD//ATMKK9//ATKO1//TGA1//AT5G63190//AT5G61530//AtRABA1f//AT5G58120//AtPSKR2//AT5G53900//AT5G46510//AT5G46520//AT5G46270//AT5G40910//AtRLP54//ATIRE1-1//AT5G05600//ABCB29//ATFTA//AT3G53390//ARA-3//AT3G46370//AT3G44630//AT3G44400//AT4G23050//CCS52A1//AT4G18593//AtRLP47//ATWRKY19//CCS52A2//AT4G02850//AT4G01910//AT4G01920//AFP3//AT1G34110//ATHCHIB//AT1G69550//ATMKP2//ELO1//FEI1//ATHMG//ATMMS21//TMKL1//AtRLP41//AtRLP42//AtRLP43//ATGL1//PDF1.2b//ATRLP40//MOS4//AT3G15410//TCTP//SRF6//AIG1//AT1G63880//AOX1D//AtRLP4//HSL1//ATCDPK2//AT1G72840//AT1G72920//AtRLP2//ATSERK2//CuAO1//AT1G13230//GAI//ATKS//ATMPK7//ATCOL3//AT2G21830//PAP3//ATGLR3.4//GES//ALB4//AT1G61620//BRL2//AtRLP19//HY3//AT2G27060//AT2G34810
GO:0044700	single organism signaling	BP	0.070248686990553	ACX1//ATERF6//RPP4//BAL//RPP5//PHYD//ATMKK9//ATKO1//TGA1//AT5G63190//AT5G61530//AtRABA1f//AT5G58120//AtPSKR2//AT5G53900//AT5G46510//AT5G46520//AT5G46270//AT5G40910//AtRLP54//ATIRE1-1//AT5G05600//ABCB29//ATFTA//AT3G53390//ARA-3//AT3G46370//AT3G44630//AT3G44400//AT4G23050//CCS52A1//AT4G18593//AtRLP47//ATWRKY19//CCS52A2//AT4G02850//AT4G01910//AT4G01920//AFP3//AT1G34110//ATHCHIB//AT1G69550//ATMKP2//ELO1//FEI1//ATHMG//ATMMS21//TMKL1//AtRLP41//AtRLP42//AtRLP43//ATGL1//PDF1.2b//ATRLP40//MOS4//AT3G15410//TCTP//SRF6//AIG1//AT1G63880//AOX1D//AtRLP4//HSL1//ATCDPK2//AT1G72840//AT1G72920//AtRLP2//ATSERK2//CuAO1//AT1G13230//GAI//ATKS//ATMPK7//ATCOL3//AT2G21830//PAP3//ATGLR3.4//GES//ALB4//AT1G61620//BRL2//AtRLP19//HY3//AT2G27060//AT2G34810
GO:0030003	cellular cation homeostasis	BP	0.0723841864513477	ATKCO1//NDH18//ATCLC-A//AT5G02160//HCEF1//ATCHX20//AtTMN7//PGM2//ATNRAMP6//GAD2//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0055065	metal ion homeostasis	BP	0.0747180317281311	ATKCO1//ATCHX20//BCD1//AtTMN7//PGM2//ATNRAMP6//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0072507	divalent inorganic cation homeostasis	BP	0.0796544079744461	AtTMN7//PGM2//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0015706	nitrate transport	BP	0.081326672357268	DELTA-TIP2//TGA1//ATCLC-A//ATNRT2.7//ATCHITIV//PHT4;3//ATHCHIB//ALPHA-DOX1//AtATL15//AGP2//AtG3Pp5
GO:0009312	oligosaccharide biosynthetic process	BP	0.0817149426739033	AT3G59480//PGM2//GAI//ATTPS8//ATTPS11
GO:0050801	ion homeostasis	BP	0.0839443915344977	ATKCO1//NDH18//ATCLC-A//AT5G02160//HCEF1//ATCHX20//GDPDL1//BCD1//AtTMN7//PGM2//ATNRAMP6//GAD2//ATCHX16//AT-PHH1//ATGLR3.4//ATGLR2//AtG3Pp5//HY3
GO:0055082	cellular chemical homeostasis	BP	0.0866964764592639	ATKCO1//NDH18//ATCLC-A//AT5G02160//HCEF1//ATCHX20//GDPDL1//AtTMN7//PGM2//ATNRAMP6//GAD2//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0006281	DNA repair	BP	0.0867548596316798	CRY3//POLH//AT5G02370//AT3G48210//AT3G48425//ARLIM15//AT1G12400//ATRECQ4B//UBC28//AT1G11240//AT-PHH1//ATREV3//AT2G18600//NAP1;2//ATPCNA2//AT2G19790//ATMAK3
GO:0006414	translational elongation	BP	0.0871538386879078	AT3G53890//ATSCO1//AT2G40010
GO:0010584	pollen exine formation	BP	0.0871538386879078	LAP6//EDA2//AGL30
GO:0009625	response to insect	BP	0.0902460347628936	ACX1//LCR77//CYP94B3//ESM1//ACX5//ATMAK3
GO:0006334	nucleosome assembly	BP	0.0942314266789681	HTB11//AT3G27360//AT2G28720//NAP1;2//AT2G30620
GO:0034728	nucleosome organization	BP	0.0942314266789681	HTB11//AT3G27360//AT2G28720//NAP1;2//AT2G30620
GO:0065004	protein-DNA complex assembly	BP	0.0942314266789681	HTB11//AT3G27360//AT2G28720//NAP1;2//AT2G30620
GO:0071824	protein-DNA complex subunit organization	BP	0.0942314266789681	HTB11//AT3G27360//AT2G28720//NAP1;2//AT2G30620
GO:0009851	auxin biosynthetic process	BP	0.0947020640687822	ATMKK9//AAO1//AT4G12060//AT3G28940//GRP3S//UGT74B1//FMO
GO:0006275	regulation of DNA replication	BP	0.106101608994334	CYCA1;1//AT5G02370//CCS52A1//CCS52A2//ATMMS21//RRG//SAMBA//ATPCNA2
GO:0055080	cation homeostasis	BP	0.10695732836843	ATKCO1//NDH18//ATCLC-A//AT5G02160//HCEF1//ATCHX20//BCD1//AtTMN7//PGM2//ATNRAMP6//GAD2//ATCHX16//AT-PHH1//ATGLR3.4//ATGLR2//HY3
GO:0071900	regulation of protein serine/threonine k...	BP	0.10766279602324	CYCA1;1//CYCA1//CYCD5;1//AT4G18593//ATMKP2
GO:0048506	regulation of timing of meristematic pha...	BP	0.107994694362921	SPL2//A/N-InvC//AT1G35560
GO:0048510	regulation of timing of transition from ...	BP	0.107994694362921	SPL2//A/N-InvC//AT1G35560
GO:0055067	monovalent inorganic cation homeostasis	BP	0.107994694362921	ATKCO1//ATCHX20//ATCHX16
GO:0010119	regulation of stomatal movement	BP	0.111352168935608	ATKCO1//ZIFL1//TCTP//AIT1
GO:0006354	DNA-templated transcription, elongation	BP	0.113583703945555	NFD3//AT5G08565//MRPL11//AT3G06040//ATSCO1//AT2G20060
GO:0043549	regulation of kinase activity	BP	0.121970898171552	CYCA1;1//CYCA1//CYCD5;1//AT4G18593//ATMKP2
GO:0045859	regulation of protein kinase activity	BP	0.121970898171552	CYCA1;1//CYCA1//CYCD5;1//AT4G18593//ATMKP2
GO:0006974	cellular response to DNA damage stimulus	BP	0.123575857877654	CRY3//SUV2//POLH//AT5G02370//AT3G48210//AT3G48425//ARLIM15//ATMMS21//AT1G12400//ATRECQ4B//UBC28//AT1G11240//AT-PHH1//ATREV3//AT2G18600//NAP1;2//ATPCNA2//AT2G19790//ATMAK3
GO:0007154	cell communication	BP	0.124325478157232	ACX1//ATERF6//APS3//RPP4//BAL//RPP5//PHYD//ATMKK9//AT1G32220//ATKO1//TGA1//AT5G63190//AT5G61530//AtRABA1f//AT5G58120//AtPSKR2//AT5G53900//AT5G46510//AT5G46520//AT5G46270//AT5G40910//ATCLC-A//AtRLP54//ATIRE1-1//AT5G05600//ABCB29//ATFTA//AT3G53390//DIN11//ARA-3//AT3G46370//AT3G44630//AT3G44400//AT4G23050//CCS52A1//ARK3//AT4G18593//AtRLP47//ATWRKY19//AT4G11900//CCS52A2//AT4G02850//AT4G01910//AT4G01920//AFP3//AT1G34110//ATHCHIB//AT1G69480//AT1G69550//ATMKP2//ELO1//FEI1//ATHMG//ATMMS21//TMKL1//AtRLP41//AtRLP42//AtRLP43//ATGL1//PDF1.2b//ATRLP40//MOS4//AT3G15410//TCTP//ALPHA-DOX1//AT1G35350//SRF6//AIG1//AT1G63880//AOX1D//AtRLP4//HSL1//ATCDPK2//AT1G72840//AT1G72920//AtRLP2//ATSERK2//CuAO1//AT1G13230//GAI//ATKS//AtOCT5//ATMPK7//ATPAP1//ATCOL3//AT2G21830//PAP3//ATGLR3.4//LPR1//GES//ALB4//AT1G61620//BRL2//AtRLP19//HY3//AT2G27060//AT2G34810
GO:0043248	proteasome assembly	BP	0.124354498760891	CYCA1//FRO1//AT5G63990//UBC30//PBA1//CCS52A1//CCS52A2//MEE34//AT1G77770//SEH1H//ATECH2//RPN12a//UBC28//SDH5//MGP1
GO:0051788	response to misfolded protein	BP	0.124354498760891	CYCA1//FRO1//AT5G63990//UBC30//PBA1//CCS52A1//CCS52A2//MEE34//AT1G77770//SEH1H//ATECH2//RPN12a//UBC28//SDH5//MGP1
GO:0006259	DNA metabolic process	BP	0.124633841688625	CYCA1;1//CYCA1//CRY3//ATPRD2//UBC30//ATRPA70C//POLH//ATBP-1//ATDPB//AT5G02370//AT3G48210//AT3G48425//CYCD5;1//CCS52A1//CCS52A2//ATCTC1//MDO1//MEE34//ATHMG//ARLIM15//ATMMS21//AT1G12400//EMB2811//ATRECQ4B//RRG//SAMBA//HEI10//RPN12a//UBC28//AT1G11240//AT-PHH1//ATREV3//AT2G18600//NAP1;2//ATPCNA2//AT2G19790//AT2G14800//ATMAK3
GO:0071495	cellular response to endogenous stimulus	BP	0.127729081520678	ATERF6//ATMKK9//ATKO1//AT5G63190//AT5G55620//AT5G53900//AtRLP54//BGLU42//AT5G05600//ABCB29//ATFTA//AT3G53390//ARA-3//SGT1A//AT4G02850//AFP3//ATHCHIB//ELO1//ATMMS21//ATGL1//PDF1.2b//TCTP//AOX1D//ATCDPK2//ATSERK2//CuAO1//GAI//ATKS//PAP3//ATGLR3.4//GES//BRL2//AtRLP19//HY3//AT2G34810
GO:0002213	defense response to insect	BP	0.128872283206105	ACX1//CYP94B3//ACX5//ATMAK3