GOID TERM ONTOLOGY pValue Genes GO:0006354 DNA-templated transcription, elongation BP 0.0011295673610012 PSAC//NDHA//RPS12//RPS18//PSBT//PSBN//PSBD//PSBC//PSAA//YCF3//PSBG//ATPB//PSBK//AT5G64670//AT5G55140//AT4G11175//AT3G18880//HLL//AT1G07830//emb1129//emb2394 GO:0042886 amide transport BP 0.00830105105921994 CLT1//ATFOLT1//AT5G46040//AT5G39990//ATYSL2//ATPTR5//ATWRKY7//GATA17//AQP1//AtRLP1//AT1G28390//AT1G22550//SEL1//YSL7//AT1G27040//AT1G24530 GO:0032957 inositol trisphosphate metabolic process BP 0.0184360224898471 BST1//AT4G33770//AT4G08170//GCR1 GO:0006857 oligopeptide transport BP 0.0192551396551441 CLT1//AT5G46040//AT5G39990//ATYSL2//ATPTR5//ATWRKY7//GATA17//AtRLP1//AT1G28390//AT1G22550//SEL1//YSL7//AT1G27040//AT1G24530 GO:0015833 peptide transport BP 0.0192551396551441 CLT1//AT5G46040//AT5G39990//ATYSL2//ATPTR5//ATWRKY7//GATA17//AtRLP1//AT1G28390//AT1G22550//SEL1//YSL7//AT1G27040//AT1G24530 GO:0072348 sulfur compound transport BP 0.0219923985440333 CLT1//SULTR4;2//AT3G21390//SUE3//SEL1 GO:0019751 polyol metabolic process BP 0.0275793170044621 ACBP//AtITPK1//BST1//AtGDPD6//AT5G03980//AT3G48460//AT4G33770//AT4G08170//ATGLCAK//GBSS1//GCR1//AT1G70985//5PTase14 GO:0009225 nucleotide-sugar metabolic process BP 0.0331380455479658 GME//DRT101//ATUGD1//NRS/ER//GlcNAc1pUT1//MEE25 GO:0009817 defense response to fungus, incompatible... BP 0.0339970025743304 ATPB//ATMES9//ATTIP49A//ATMES7 GO:0015698 inorganic anion transport BP 0.0392841180220557 AT5G19970//AT5G26010//AT3G62040//AMT1;4//AT-NLM1//AT1G17860//SULTR4;2//AtNiaP//AT3G23190//JAL34//ATGSTF14//SUE3//AT1G22440//SEL1//AT1G14040//ATOCT6//ATPAP8//ATOCT2//ATCLC-F//AT2G21045//AT2G39110//AT2G03260//AT2G44380 GO:0045787 positive regulation of cell cycle BP 0.0553172734824617 ATS4//COP13//LGO//CPSF73-I GO:0009741 response to brassinosteroid BP 0.062170179471935 14-3-3KAPPA//ALNS//SUPER1//ROC1//AGC2-4//SAUR27//AT1G77640//AUF1//GCR1//ATOFP15//AT1G24530//AT2G35760 GO:0008033 tRNA processing BP 0.0633001088883207 ATSEN2//AT5G17660//AT3G63510//ATIPT3//CPZ//AT1G22660 GO:0005985 sucrose metabolic process BP 0.0681290398402945 ATSUS4//A/N-InvI//AT1G66430//ATSPP1 GO:0000469 cleavage involved in rRNA processing BP 0.0699886829816283 AtLa1//AT3G07750//AT2G37990 GO:0000478 endonucleolytic cleavage involved in rRN... BP 0.0699886829816283 AtLa1//AT3G07750//AT2G37990 GO:0008272 sulfate transport BP 0.0699886829816283 SULTR4;2//SUE3//SEL1 GO:0090501 RNA phosphodiester bond hydrolysis BP 0.0699886829816283 AtLa1//AT3G07750//AT2G37990 GO:0090502 RNA phosphodiester bond hydrolysis, endo... BP 0.0699886829816283 AtLa1//AT3G07750//AT2G37990 GO:0043647 inositol phosphate metabolic process BP 0.077713871544828 ACBP//AtITPK1//BST1//AT4G33770//AT4G08170//GBSS1//GCR1//AT1G70985//5PTase14 GO:0010014 meristem initiation BP 0.104230314703853 TET1//ATUBP26//SARK//CLE44//AT3G27220//CLE41//CPSF73-I//ATDUF6//AT1G26530//AT1G62770//SRD2//AT2G22420//AT2G25420 GO:0000338 protein deneddylation BP 0.11017172269992 AT5G64680//ATS4//ATTIP49A//COP13//BGT//AtLa1//CSN6B//VIL1//AT3G02650//AT2G37990 GO:0010388 cullin deneddylation BP 0.11017172269992 AT5G64680//ATS4//ATTIP49A//COP13//BGT//AtLa1//CSN6B//VIL1//AT3G02650//AT2G37990 GO:0005986 sucrose biosynthetic process BP 0.110591956911659 ATSUS4//AT1G66430//ATSPP1 GO:0009798 axis specification BP 0.111066757995092 AtIAMT1//TET1//SARK//AT3G27220//ATDUF6//AT1G26530//SRD2//AT2G22420 GO:0043603 cellular amide metabolic process BP 0.111066757995092 AT5G27430//FOLB2//ALNS//ACD5//FOLB1//AT3G05230//AT1G77670//ATGSTU14 GO:0009926 auxin polar transport BP 0.111111774132016 AT5G13140//TET1//AT5G01090//AXR2//AT1G76530//AUF1//SRD2//AT2G05790//LCR68 GO:0002238 response to molecule of fungal origin BP 0.114608762275678 AT3G20200//AT3G17020//LOV1//AT1G44760 GO:0008361 regulation of cell size BP 0.117923106480984 AT5G13140//TET1//AT5G01090//AXR2//AT2G05790//LCR68 GO:0009914 hormone transport BP 0.120539290547559 AT5G13140//TET1//AT5G01090//AXR2//AT1G76530//AUF1//SRD2//AT2G05790//LCR68 GO:0010089 xylem development BP 0.120539290547559 AT5G53090//AT5G51590//ATXTH20//TET5//CLE44//CLE41//TPR12//IXR11//AT1G62770 GO:0060918 auxin transport BP 0.120539290547559 AT5G13140//TET1//AT5G01090//AXR2//AT1G76530//AUF1//SRD2//AT2G05790//LCR68 GO:0009944 polarity specification of adaxial/abaxia... BP 0.120727052754426 AtIAMT1//TET1//SARK//AT3G27220//ATDUF6//AT1G26530//AT2G22420 GO:0016246 RNA interference BP 0.126281166179128 AT4G17560//AT5G66970//ATUPF1//AtLHP1//SARK//CPSF73-I//EMB2810//ATDUF6//AT1G63470//CRWN2//AT1G24240//AT2G25420//AT2G01210 GO:0010048 vernalization response BP 0.127982420758747 RL2//AtLHP1//AGL25//AGL18//AT3G46680//AT1G13680//VIL1//REM39//AT3G08620//emb1345 GO:0009943 adaxial/abaxial axis specification BP 0.132512947199524 AtIAMT1//TET1//SARK//AT3G27220//ATDUF6//AT1G26530//AT2G22420 GO:0065001 specification of axis polarity BP 0.132512947199524 AtIAMT1//TET1//SARK//AT3G27220//ATDUF6//AT1G26530//AT2G22420 GO:0009742 brassinosteroid mediated signaling pathw... BP 0.132531491440879 14-3-3KAPPA//ALNS//ROC1//GCR1 GO:0043401 steroid hormone mediated signaling pathw... BP 0.132531491440879 14-3-3KAPPA//ALNS//ROC1//GCR1 GO:0048545 response to steroid hormone BP 0.132531491440879 14-3-3KAPPA//ALNS//ROC1//GCR1 GO:0071367 cellular response to brassinosteroid sti... BP 0.132531491440879 14-3-3KAPPA//ALNS//ROC1//GCR1 GO:0071383 cellular response to steroid hormone sti... BP 0.132531491440879 14-3-3KAPPA//ALNS//ROC1//GCR1 GO:0006071 glycerol metabolic process BP 0.133570443212858 AtGDPD6//AT5G03980//AT3G48460 GO:0009226 nucleotide-sugar biosynthetic process BP 0.133570443212858 DRT101//ATUGD1//NRS/ER GO:0006820 anion transport BP 0.138725087600129 AAP5//AT5G19500//CLT1//AT5G19970//AT5G26010//ATFOLT1//AT5G55050//AT5G19070//AT5G15240//AT3G62040//ATVDAC5//AMT1;4//ATGDU2//AT-NLM1//AT4G08940//AT1G17860//SULTR4;2//AT3G30390//AT3G21390//AtNiaP//AT3G23190//JAL34//ATGSTF14//SS3//SUE3//AT1G22440//SEL1//AT1G14040//ATOCT6//AT1G21010//YSL7//AtG3Pp3//ATPAP8//ATOCT2//ATCLC-F//AT2G21045//AT2G39110//AT2G03260//AT2G44380 GO:0071705 nitrogen compound transport BP 0.140263654837609 AAP5//AT5G19500//CLT1//AT5G19970//AT5G26010//ATFOLT1//AT5G55050//AT5G48420//AT5G46040//AT5G39990//ATYSL2//AT5G19070//AT5G15240//AT5G11230//PUT3//ATPTR5//AT3G62040//AtLa1//AMT1;4//ATGDU2//ATWRKY7//AT4G08940//AT1G17860//AT3G30390//AT3G21390//GATA17//AtNiaP//AT3G23190//AQP1//JAL34//AT1G53660//AT1G76530//SS3//AtRLP1//AT1G28390//AT1G22550//AT1G22440//SEL1//ATOCT6//AT1G21010//YSL7//ATPAP8//ATOCT2//AT1G27040//AT1G24530//AT2G21045//AtTHP1//ATPUP5//AT2G37990//AT2G39110//AT2G44380//AT2G30460 GO:0006665 sphingolipid metabolic process BP 0.14472877349826 AT5G21100//ACD5//PUT3//LAG1//ATDPL1//AT2G39630 GO:0006066 alcohol metabolic process BP 0.155322060853478 AT4G14380//AT5G21100//ACBP//AtITPK1//BST1//AtcPT5//ATB5-B//SQE6//AtGDPD6//PUT3//AT5G03980//AT3G48460//AT3G43960//AT4G33770//AT4G29270//AT4G08170//LAG1//ATGLCAK//JAL34//AT1G12230//GBSS1//AT1G22440//GCR1//AT1G70985//5PTase14//AT1G12080//ATPSAT1//ATDET2//AT2G29660//AT2G39630//KCS11 GO:0015706 nitrate transport BP 0.155565847688539 AT5G19970//AT5G26010//AT3G62040//AT1G17860//AtNiaP//AT3G23190//JAL34//AT1G22440//SEL1//ATOCT6//ATPAP8//ATOCT2//AT2G21045//AT2G39110//AT2G44380 GO:0009407 toxin catabolic process BP 0.156351798442147 14-3-3KAPPA//ATGSTT2//ABCA2//ATPURC//GATA17//PBB1//ATDPL1//ATGSTF14//AT1G50110//AtBCAT7//ATGSTU15//ATGSTU14 GO:0090487 secondary metabolite catabolic process BP 0.156351798442147 14-3-3KAPPA//ATGSTT2//ABCA2//ATPURC//GATA17//PBB1//ATDPL1//ATGSTF14//AT1G50110//AtBCAT7//ATGSTU15//ATGSTU14 GO:0007568 aging BP 0.157407551810599 RNS2//TET1//SARK//AT4G27700//TET5//ESP//ATPSAT1//AT2G21045//TET2//ALB3 GO:0009825 multidimensional cell growth BP 0.157407551810599 AT5G13140//AtLHP1//AT5G01090//ATEXP17//AXR2//ATEXP13//ARP3//ATEXPB2//FEI2//LCR68 GO:0006518 peptide metabolic process BP 0.158017108098165 AT5G27430//AT3G05230//ATGSTU14 GO:0019400 alditol metabolic process BP 0.158017108098165 AtGDPD6//AT5G03980//AT3G48460 GO:0000079 regulation of cyclin-dependent protein s... BP 0.159085248532164 ATRCY1//CYCP4//AT5G48630//AT;CDKD;2//CYCP2;1//CKS2 GO:0010075 regulation of meristem growth BP 0.161825155141413 AT1G31920//AT5G51560//TET1//AT5G09760//SARK//A/N-InvI//AT3G27220//FAF4//AT1G69420//AT1G26530//SOL1//AT2G22420//AT2G05790//LCR68 GO:0010167 response to nitrate BP 0.161825155141413 AT5G19970//AT5G26010//AT3G62040//AT1G17860//AT3G23190//JAL34//AFB3//AT1G22440//SEL1//PGM//ATPAP8//AT2G21045//AT2G39110//AT2G44380 GO:0070646 protein modification by small protein re... BP 0.168375462239216 AT5G64680//ATS4//ATTIP49A//COP13//BGT//AtLa1//CSN6B//VIL1//AT3G02650//AT1G67570//ATSPP1//DUO3//AT2G37990 GO:0022411 cellular component disassembly BP 0.171450111008658 ACD5//ATGRP2//AtCPB//AT2G47020 GO:0016129 phytosteroid biosynthetic process BP 0.178724315108832 AT4G14380//AT3G43960//AT4G29270//JAL34//AT1G12230//AT1G22440//AT1G12080//ATDET2//AT2G29660//KCS11 GO:0016132 brassinosteroid biosynthetic process BP 0.178724315108832 AT4G14380//AT3G43960//AT4G29270//JAL34//AT1G12230//AT1G22440//AT1G12080//ATDET2//AT2G29660//KCS11 GO:0006012 galactose metabolic process BP 0.18369206675209 AT5G66530//AT4G23730//MEE25 GO:0009955 adaxial/abaxial pattern specification BP 0.184878782699607 AtIAMT1//TET1//SARK//AT3G27220//ATDUF6//AT1G26530//AT2G22420 GO:0035194 posttranscriptional gene silencing by RN... BP 0.186970555524674 AT4G17560//AT5G66970//ATUPF1//AtLHP1//SARK//CPSF73-I//EMB2810//ATDUF6//AT1G63470//CRWN2//AT1G24240//AT2G25420//AT2G01210 GO:0010087 phloem or xylem histogenesis BP 0.189858534680485 AT5G53090//AT5G51590//ATXTH20//TET5//DOT4//CLE44//CLE41//TPR12//IXR11//AT1G62770 GO:0009756 carbohydrate mediated signaling BP 0.19237552476936 ATUPF1//COP13//ATUBP26//ISI1//EDA8//VIL1//ASML2//ATHXK2 GO:0010182 sugar mediated signaling pathway BP 0.19237552476936 ATUPF1//COP13//ATUBP26//ISI1//EDA8//VIL1//ASML2//ATHXK2 GO:0010039 response to iron ion BP 0.192580155582529 ATYSL2//ATFER3//ATFER2//ATMTK//AtEIL1 GO:0009404 toxin metabolic process BP 0.195148555825175 14-3-3KAPPA//ATGSTT2//ABCA2//ATPURC//GATA17//PBB1//ATDPL1//ATGSTF14//AT1G50110//AtBCAT7//ATGSTU15//ATGSTU14 GO:0035266 meristem growth BP 0.197532280371605 AT1G31920//AT5G51560//TET1//AT5G09760//SARK//A/N-InvI//AT3G27220//FAF4//AT1G69420//AT1G26530//SOL1//AT2G22420//AT2G05790//LCR68 GO:0042546 cell wall biogenesis BP 0.201533791495118 AT5G26330//AtIAMT1//AGP25//ATCSLD4//LSH9//AtENODL19//AT4G08690//RIC1//AT3G08600//ATGLCAK//AT1G69420//AT1G70550//OSU1//IXR11//DUO3//FUT8//AtkdsA1//AtXTH32//FEI2//AT2G27740//ATROPGEF4//KCS11 GO:0010267 production of ta-siRNAs involved in RNA ... BP 0.205643075893824 AT4G17560//AT5G66970//SARK//ATDUF6//AT1G63470//CRWN2//AT1G24240//AT2G25420 GO:0016441 posttranscriptional gene silencing BP 0.20648897029299 AT4G17560//AT5G66970//ATUPF1//AtLHP1//SARK//CPSF73-I//EMB2810//ATDUF6//AT1G63470//CRWN2//AT1G24240//AT2G25420//AT2G01210 GO:0051604 protein maturation BP 0.210860960968247 AT5G64680//ATTIP49A//COP13//AT2G36930//emb1345 GO:0016128 phytosteroid metabolic process BP 0.213011583444271 AT4G14380//AT3G43960//AT4G29270//JAL34//AT1G12230//AT1G22440//AT1G12080//ATDET2//AT2G29660//KCS11 GO:0016131 brassinosteroid metabolic process BP 0.213011583444271 AT4G14380//AT3G43960//AT4G29270//JAL34//AT1G12230//AT1G22440//AT1G12080//ATDET2//AT2G29660//KCS11 GO:0046173 polyol biosynthetic process BP 0.213826887739956 ACBP//AtITPK1//AT5G03980//AT3G48460//GBSS1//GCR1//AT1G70985 GO:0048868 pollen tube development BP 0.216318057123178 AT4G17690//AT5G36260//AT5G27980//BST1//IRE//ATEXO70C2//ATPTR5//AT3G59830//LAP3//PRK3//AT4G34600//AT4G20160//RIC1//MEE18//AT1G64320//AtNiaP//AT3G10540//ATGLCAK//AT1G16360//AtkdsA1//AtPRK2//MEE25 GO:0009799 specification of symmetry BP 0.222789971826793 CHR24//TET1//SARK//AT3G27220//CPSF73-I//ATDUF6//AT1G26530//AT2G22420//AT2G25420 GO:0009855 determination of bilateral symmetry BP 0.222789971826793 CHR24//TET1//SARK//AT3G27220//CPSF73-I//ATDUF6//AT1G26530//AT2G22420//AT2G25420 GO:0015980 energy derivation by oxidation of organi... BP 0.225000961715229 NDHA//NDHH//PSBG//AtTK1b//APT5//IDH-III//AT3G28700//AT3G27220//AT1G66430//AT1G12230 GO:0071322 cellular response to carbohydrate stimul... BP 0.233200738822312 ATUPF1//COP13//ATUBP26//ISI1//EDA8//VIL1//ASML2//ATHXK2 GO:0009933 meristem structural organization BP 0.234132796997656 TET1//COP13//ATUBP26//SARK//CLE44//EDA8//VIL1//AT3G27220//CLE41//CPSF73-I//ATDUF6//AT1G26530//AT1G62770//SRD2//AT2G22420//AT2G25420 GO:0040008 regulation of growth BP 0.23579161701616 AT1G31920//ALNS//AT5G51560//TET1//ATUBC8//AT5G09760//PRK3//SARK//A/N-InvI//AT3G27220//AXR2//FAF4//CDC27a//AT1G69420//AT1G26530//SOL1//AT2G22420//AT2G05790//LCR68//AtPRK2 GO:0044070 regulation of anion transport BP 0.235878408685671 ATVDAC5//ATGDU2//AT1G22440//AT2G21045 GO:0046519 sphingoid metabolic process BP 0.235878408685671 AT5G21100//PUT3//LAG1//AT2G39630 GO:0046520 sphingoid biosynthetic process BP 0.235878408685671 AT5G21100//PUT3//LAG1//AT2G39630 GO:0009913 epidermal cell differentiation BP 0.237796642172456 ATHDA18//AtEGL3//AT1G09600 GO:0030855 epithelial cell differentiation BP 0.237796642172456 ATHDA18//AtEGL3//AT1G09600 GO:0032984 macromolecular complex disassembly BP 0.237796642172456 ATGRP2//AtCPB//AT2G47020 GO:0043241 protein complex disassembly BP 0.237796642172456 ATGRP2//AtCPB//AT2G47020 GO:0001932 regulation of protein phosphorylation BP 0.244292923684805 ATRCY1//CYCP4//AT5G48630//ROC1//AT;CDKD;2//CYCP2;1//CKS2 GO:0042545 cell wall modification BP 0.251547123635564 ATSYP23//AT4G17690//AT5G19730//AT5G36260//BST1//AT5G64640//IRE//ATSYP22//CASP5//ATEXO70C2//AT5G09760//AT3G59830//LAP3//ATEXP17//RIC1//AT3G13674//AT1G64320//AtNiaP//ATEXP13//AT3G10540//AT1G01300//AT1G16360//ATSRS//AT1G27400//ATEXPB2//AtPRK2 GO:0048532 anatomical structure arrangement BP 0.253091067433179 TET1//COP13//ATUBP26//SARK//CLE44//EDA8//VIL1//AT3G27220//CLE41//CPSF73-I//ATDUF6//AT1G26530//AT1G62770//SRD2//AT2G22420//AT2G25420 GO:0031047 gene silencing by RNA BP 0.255117346335055 AT4G17560//AT5G66970//ATUPF1//AtLHP1//CHR38//SARK//VIL1//FDM4//CPSF73-I//EMB2810//ATBPC3//AT1G67570//ATDUF6//AT1G63470//AT1G49590//CRWN2//AT1G24240//AT2G25420//AT2G01210 GO:0009856 pollination BP 0.257432015603961 AT4G17690//AT5G36260//AT5G27980//BST1//IRE//ATEXO70C2//ATPTR5//AT3G59830//LAP3//PRK3//ATCSLD4//AT4G34600//AT4G20160//RIC1//MEE18//AT1G64320//AtNiaP//AT3G10540//ATGLCAK//ATPTB1//AT1G16360//AtkdsA1//AtPRK2//MEE25 GO:0044706 multi-multicellular organism process BP 0.257432015603961 AT4G17690//AT5G36260//AT5G27980//BST1//IRE//ATEXO70C2//ATPTR5//AT3G59830//LAP3//PRK3//ATCSLD4//AT4G34600//AT4G20160//RIC1//MEE18//AT1G64320//AtNiaP//AT3G10540//ATGLCAK//ATPTB1//AT1G16360//AtkdsA1//AtPRK2//MEE25 GO:0051701 interaction with host BP 0.261953312597 IAA9//PDLP1//SARK//ETP2//ATDUF6//AT1G63470//CRWN2//AT2G25420 GO:0009735 response to cytokinin BP 0.262621497442074 HAT22//AT4G11190//AT3G23190//AUF1//AT1G70550//OSU1//ARR15//GCR1//SRD2